CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	0 crisprs	NA	1
CP032525	Shigella sonnei strain AR_0030 plasmid unnamed2, complete sequence	0 crisprs	NA	0
CP032523	Shigella sonnei strain AR_0030 chromosome, complete genome	0 crisprs	csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas3,c2c9_V-U4,DEDDh,DinG	22

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4372 : 17102

Enterobacteria_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE48165.1\|4372_5529_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE48166.1\|5544_6105_+	hypothetical protein	NA	NA	NA	NA
AYE48167.1\|6469_7330_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AYE48168.1\|7512_8070_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	99.5
AYE48169.1\|8233_11239_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.9
AYE48260.1\|11647_11827_-	Par-like protein	NA	NA	NA	NA
AYE48170.1\|11946_12573_-	cobyrinic acid ac-diamide synthase	E5FFJ3	Burkholderia_phage	2.0e-17	31.1
AYE48171.1\|12760_14032_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	2.2e-143	60.4
AYE48172.1\|14031_14469_-	peptidase	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
AYE48173.1\|14465_14714_-	protein ImpC	Q2A098	Sodalis_phage	1.9e-14	48.0
AYE48261.1\|14824_15094_+	hypothetical protein	NA	NA	NA	NA
AYE48174.1\|15062_16034_+	DUF1281 domain-containing protein	NA	NA	NA	NA
AYE48175.1\|16418_17102_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.1e-30	37.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032523

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16011 : 199641

172

Enterobacteria_phage(42.27%)

head,terminase,plate,tRNA,transposase,protease,tail,portal,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE43657.1\|16011_16749_-\|tRNA	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	NA	NA	NA	NA
AYE43658.1\|16867_17671_+	inositol-1-monophosphatase	NA	NA	NA	NA
AYE43659.1\|17815_18670_+	alpha/beta hydrolase	NA	NA	NA	NA
AYE43660.1\|18860_20141_+	stationary phase inducible protein CsiE	NA	NA	NA	NA
AYE43661.1\|20132_21272_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA
AYE43662.1\|21431_22322_-	DNA-binding transcriptional regulator HcaR	NA	NA	NA	NA
AYE43663.1\|22457_23819_+	3-phenylpropionate/cinnamic acid dioxygenase subunit alpha	NA	NA	NA	NA
AYE43664.1\|23815_24334_+	3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA	NA	NA	NA
AYE43665.1\|24333_24654_+	3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit	NA	NA	NA	NA
AYE43666.1\|24650_25463_+	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase	NA	NA	NA	NA
AYE43667.1\|25472_26675_+	phenylpropionate dioxygenase ferredoxin reductase subunit	NA	NA	NA	NA
AYE43668.1\|27536_27971_+	DoxX family protein	NA	NA	NA	NA
AYE43669.1\|28018_28891_-	aldose 1-epimerase	NA	NA	NA	NA
AYE47966.1\|28902_29964_-	alcohol dehydrogenase	NA	NA	NA	NA
AYE43670.1\|30029_31028_-	ABC transporter permease	NA	NA	NA	NA
AYE43671.1\|31052_32564_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.3
AYE43672.1\|32586_33570_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE43673.1\|38452_39706_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-101	52.7
AYE43674.1\|40033_41224_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
AYE43675.1\|41268_41607_-	nitrogen regulatory protein P-II 1	NA	NA	NA	NA
AYE43676.1\|41667_43002_-	transcriptional regulator	W8CYM9	Bacillus_phage	3.9e-10	37.3
AYE43677.1\|42991_43705_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
AYE43678.1\|43869_45297_-	two component system sensor histidine kinase QseE/GlrK	W8CYF6	Bacillus_phage	2.3e-16	24.9
AYE43679.1\|45854_49742_-	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	1.3e-130	58.9
AYE43680.1\|49999_51556_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
AYE43681.1\|51552_52089_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
AYE43682.1\|52113_52749_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
AYE43683.1\|52957_53806_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYE43684.1\|53910_54093_-	hypothetical protein	NA	NA	NA	NA
AYE43685.1\|55192_57019_+	invasion protein	NA	NA	NA	NA
AYE43686.1\|57019_57199_-	hypothetical protein	NA	NA	NA	NA
AYE43687.1\|57198_57822_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.1e-78	75.9
AYE43688.1\|57772_58939_-\|tail	phage tail protein	Q8W611	Enterobacteria_phage	1.4e-56	38.7
AYE43689.1\|59506_59854_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.3e-60	98.3
AYE43690.1\|60092_61249_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE43691.1\|61300_61519_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.4e-34	100.0
AYE43692.1\|61845_62973_-\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
AYE43693.1\|64654_64915_+	hypothetical protein	NA	NA	NA	NA
AYE43694.1\|64911_65502_+	hypothetical protein	NA	NA	NA	NA
AYE43695.1\|65521_65869_-	hypothetical protein	NA	NA	NA	NA
AYE47967.1\|65801_66020_+	hypothetical protein	NA	NA	NA	NA
AYE43696.1\|65997_66195_+	hypothetical protein	NA	NA	NA	NA
AYE43697.1\|66350_66560_-	hypothetical protein	NA	NA	NA	NA
AYE43698.1\|66563_66746_+	hypothetical protein	NA	NA	NA	NA
AYE43699.1\|68827_69745_+	iron-regulated protein	NA	NA	NA	NA
AYE43700.1\|69752_70529_+	energy transducer TonB	NA	NA	NA	NA
AYE43701.1\|70697_72959_+	TonB-dependent receptor	NA	NA	NA	NA
AYE43702.1\|72928_74203_+	enterotoxin production-related protein TieB	NA	NA	NA	NA
AYE43703.1\|75227_76766_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.0e-283	94.3
AYE43704.1\|76815_77163_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.3e-60	98.3
AYE47968.1\|77159_77540_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.0e-64	98.4
AYE43705.1\|78667_79795_-\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
AYE43706.1\|79925_81081_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
AYE43707.1\|81448_81661_-	ANR family transcriptional regulator	NA	NA	NA	NA
AYE43708.1\|81790_82351_-	fertility inhibition protein FinO	NA	NA	NA	NA
AYE43709.1\|83172_84591_-	DNA helicase	NA	NA	NA	NA
AYE43710.1\|84473_84860_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA
AYE43711.1\|84856_86128_-	DUF87 domain-containing protein	NA	NA	NA	NA
AYE43712.1\|86312_86624_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
AYE43713.1\|88624_89425_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE43714.1\|89421_90594_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE43715.1\|91034_92222_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AYE43716.1\|92394_93597_-	recombinase	NA	NA	NA	NA
AYE43717.1\|93811_94072_+	4Fe-4S dicluster ferredoxin YfhL	A0A1B1IWY9	uncultured_Mediterranean_phage	4.9e-18	53.5
AYE43718.1\|94265_94346_-	small toxic protein ShoB	NA	NA	NA	NA
AYE43719.1\|94567_94948_-	holo-ACP synthase	NA	NA	NA	NA
AYE43720.1\|94947_95679_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AYE43721.1\|95690_96419_-	DNA repair protein RecO	NA	NA	NA	NA
AYE43722.1\|96430_97336_-	GTPase Era	NA	NA	NA	NA
AYE43723.1\|97332_98013_-	ribonuclease 3	A0A2P0VNZ5	Tetraselmis_virus	5.6e-21	39.6
AYE43724.1\|97956_98235_+	hypothetical protein	NA	NA	NA	NA
AYE43725.1\|98285_99260_-	S26 family signal peptidase	NA	NA	NA	NA
AYE43726.1\|99275_101075_-	elongation factor 4	A0A2K9L6L3	Tupanvirus	4.2e-23	41.9
AYE43727.1\|101272_101752_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
AYE43728.1\|101748_102705_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
AYE43729.1\|102704_103355_-	anti-sigma-E factor RseA	NA	NA	NA	NA
AYE43730.1\|103387_103963_-	ECF RNA polymerase sigma-E factor	NA	NA	NA	NA
AYE47969.1\|108021_108759_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AYE43731.1\|108890_110225_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
AYE43732.1\|110433_111315_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYE43733.1\|111417_112005_+	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
AYE43734.1\|112060_112444_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
AYE43735.1\|112748_113438_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.1e-56	48.8
AYE43736.1\|113485_114523_-	methyltransferase	NA	NA	NA	NA
AYE43737.1\|114512_114716_-	hypothetical protein	NA	NA	NA	NA
AYE43738.1\|114729_115149_+	thiol disulfide reductase thioredoxin	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
AYE43739.1\|115217_115916_+	DTW domain-containing protein	NA	NA	NA	NA
AYE43740.1\|115947_118608_+	protein lysine acetyltransferase	NA	NA	NA	NA
AYE43741.1\|118721_120077_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AYE43742.1\|120122_120446_+	YfiM family lipoprotein	NA	NA	NA	NA
AYE43743.1\|120442_121741_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.7e-45	32.2
AYE43744.1\|127516_130090_-	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
AYE43745.1\|130219_130951_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AYE43746.1\|130947_131928_-	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AYE43747.1\|132062_132800_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AYE43748.1\|132921_134250_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE43749.1\|134353_134716_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.1e-63	100.0
AYE43750.1\|134777_135933_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE43751.1\|135996_137493_+\|tail	phage tail protein	Q8W623	Enterobacteria_phage	5.9e-273	97.4
AYE43752.1\|137492_137849_+\|tail	phage tail protein	Q8W622	Enterobacteria_phage	5.3e-63	98.3
AYE47970.1\|137854_138184_+\|tail	phage tail assembly protein	Q8W621	Enterobacteria_phage	8.7e-52	98.2
AYE43753.1\|138268_140218_+\|tail	phage tail tape measure protein	Q8W620	Enterobacteria_phage	0.0e+00	97.8
AYE47971.1\|141338_141545_+	hypothetical protein	NA	NA	NA	NA
AYE43754.1\|141591_142983_+	DNA circularization protein	Q8W619	Enterobacteria_phage	6.1e-248	95.9
AYE43755.1\|142979_144062_+\|plate	baseplate protein	Q8W618	Enterobacteria_phage	8.0e-195	98.8
AYE43756.1\|144039_144573_+\|plate	phage baseplate assembly protein V	Q8W617	Enterobacteria_phage	3.7e-92	96.0
AYE43757.1\|144578_144989_+	hypothetical protein	Q8W616	Enterobacteria_phage	3.0e-70	95.6
AYE43758.1\|146337_146841_+\|plate	baseplate J/gp47 family protein	Q8W615	Enterobacteria_phage	3.7e-86	95.8
AYE43759.1\|146840_147431_+	DUF2313 domain-containing protein	Q8W614	Enterobacteria_phage	1.4e-113	98.0
AYE43760.1\|147417_148458_+\|tail	phage tail protein	Q8W613	Enterobacteria_phage	1.5e-158	83.5
AYE47972.1\|148517_149006_+\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	6.0e-65	77.9
AYE43761.1\|149029_150298_+\|tail	phage tail protein	Q8W611	Enterobacteria_phage	3.2e-78	43.7
AYE43762.1\|150248_150872_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	9.9e-81	78.0
AYE43763.1\|151180_151999_-	hypothetical protein	I6PD67	Cronobacter_phage	1.3e-117	79.2
AYE43764.1\|152002_152251_-	hypothetical protein	I6PCV4	Cronobacter_phage	3.3e-27	80.5
AYE43765.1\|152546_153722_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	2.7e-148	67.4
AYE43766.1\|153682_153889_-	excisionase	I6PBM8	Cronobacter_phage	6.9e-23	70.3
AYE43767.1\|153948_154164_-	hypothetical protein	K7PLX1	Enterobacteria_phage	1.2e-14	65.1
AYE43768.1\|154160_154523_-	hypothetical protein	K7PH61	Enterobacteria_phage	2.6e-65	96.7
AYE43769.1\|154513_155050_-	HD family hydrolase	U5P0T3	Shigella_phage	9.7e-101	99.4
AYE43770.1\|155177_156002_-	DUF2303 family protein	Q8SBF9	Shigella_phage	4.6e-150	99.6
AYE43771.1\|156067_156430_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AYE43772.1\|156502_156697_+	hypothetical protein	A0A291AWX8	Escherichia_phage	1.0e-31	100.0
AYE43773.1\|156798_157029_-	hypothetical protein	A0A291AWY6	Escherichia_phage	1.2e-12	94.9
AYE43774.1\|157098_157773_-	LexA family transcriptional repressor	Q8SBF6	Shigella_phage	1.7e-131	99.1
AYE43775.1\|157863_158064_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
AYE43776.1\|158107_158659_+	hypothetical protein	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
AYE43777.1\|158655_159492_+	ash family protein	Q8SBF3	Shigella_phage	1.5e-148	98.6
AYE47973.1\|159496_159721_+	hypothetical protein	A0A291AX25	Escherichia_phage	9.1e-37	97.3
AYE43778.1\|159717_160536_+	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	3.1e-122	99.6
AYE43779.1\|160532_161027_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	4.3e-87	98.1
AYE43780.1\|161026_161680_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	4.7e-126	98.6
AYE43781.1\|161676_162003_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
AYE43782.1\|161999_162389_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	1.0e-67	98.4
AYE43783.1\|162408_163218_+	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	6.0e-155	100.0
AYE43784.1\|163225_164215_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.5e-195	99.4
AYE43785.1\|164228_164981_+	antitermination protein	K7PGU5	Enterobacteria_phage	2.8e-138	100.0
AYE43786.1\|165261_165687_+	hypothetical protein	A0A291AWZ9	Escherichia_phage	3.6e-74	100.0
AYE43787.1\|165910_166114_+	hypothetical protein	A0A291AWX6	Escherichia_phage	2.3e-31	98.5
AYE43788.1\|166264_167317_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.7e-208	100.0
AYE43789.1\|167383_167599_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	9.0e-34	100.0
AYE43790.1\|167598_168096_+	lysozyme	A5LH83	Enterobacteria_phage	1.3e-91	100.0
AYE43791.1\|168092_168560_+\|lysis	lysis protein	A5LH84	Enterobacteria_phage	1.6e-75	100.0
AYE43792.1\|168581_168944_+	DNA-binding protein	A5LH85	Enterobacteria_phage	8.9e-66	99.2
AYE43793.1\|169397_169892_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
AYE43794.1\|169891_171994_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.9
AYE43795.1\|171990_172203_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AYE43796.1\|172202_173711_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	3.5e-289	99.6
AYE43797.1\|173655_175683_+\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.8
AYE43798.1\|175724_176093_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	9.7e-52	100.0
AYE43799.1\|176085_176361_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
AYE43800.1\|176372_176951_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	1.2e-101	99.5
AYE43801.1\|176947_177349_+\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
AYE43802.1\|177359_178103_+\|tail	phage tail protein	A5LH35	Enterobacteria_phage	1.0e-132	99.6
AYE47974.1\|178163_178550_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
AYE43803.1\|178558_178888_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AYE43804.1\|178859_181925_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.6
AYE43805.1\|181924_182254_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
AYE43806.1\|182263_182962_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.1
AYE43807.1\|182967_183711_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.7e-146	95.1
AYE43808.1\|183608_184256_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.5e-111	95.8
AYE43809.1\|184316_187814_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	97.2
AYE43810.1\|187884_188484_+	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	4.4e-110	98.5
AYE47975.1\|188548_191509_+	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	2.4e-55	53.8
AYE43811.1\|191508_192093_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	3.0e-103	96.3
AYE43812.1\|192162_192936_-	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
AYE43813.1\|193342_194776_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.1e-106	50.1
AYE43814.1\|194810_196019_-	restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
AYE43815.1\|196830_197313_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
AYE43816.1\|197444_197921_+	ubiquinone-binding protein	NA	NA	NA	NA
AYE43817.1\|197910_198201_+	RnfH family protein	NA	NA	NA	NA
AYE43818.1\|198312_199641_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

208306 : 250759

Enterobacteria_phage(54.17%)

terminase,tRNA,transposase,holin,portal,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE43826.1\|208306_209074_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AYE43827.1\|209115_209463_+	50S ribosomal protein L19	NA	NA	NA	NA
AYE43828.1\|209539_210022_-	OmpA family protein	NA	NA	NA	NA
AYE43829.1\|211148_211949_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE43830.1\|211945_213118_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE43831.1\|213191_213332_-	diguanylate cyclase	NA	NA	NA	NA
AYE43832.1\|213398_214554_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
AYE43833.1\|214654_215173_-	DUF4154 domain-containing protein	NA	NA	NA	NA
AYE43834.1\|215322_215688_-	DUF2799 domain-containing protein	NA	NA	NA	NA
AYE43835.1\|215896_216967_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
AYE43836.1\|216977_218099_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AYE43837.1\|218141_219302_-	P-protein	NA	NA	NA	NA
AYE47979.1\|219401_219449_-	hypothetical protein	NA	NA	NA	NA
AYE43838.1\|219552_219894_-	ribosome-associated inhibitor A	NA	NA	NA	NA
AYE43839.1\|219928_220144_-	hypothetical protein	NA	NA	NA	NA
AYE43840.1\|220153_221482_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE43841.1\|221549_222581_-\|portal	phage portal protein	Q8W629	Enterobacteria_phage	1.1e-193	97.6
AYE43842.1\|222705_222888_-	hypothetical protein	Q8W630	Enterobacteria_phage	2.9e-25	98.3
AYE43843.1\|222899_224633_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	99.5
AYE43844.1\|224629_225133_-\|terminase	phage terminase small subunit P27 family	A0A1B3B2F4	Salmonella_phage	6.7e-88	99.4
AYE43845.1\|225245_225596_-	HNH endonuclease	Q8W633	Enterobacteria_phage	4.7e-64	99.1
AYE43846.1\|225638_226106_-\|lysis	lysis protein	A5LH84	Enterobacteria_phage	6.1e-75	99.4
AYE43847.1\|226102_226600_-	lysozyme	A5LH83	Enterobacteria_phage	1.3e-91	100.0
AYE43848.1\|226599_226815_-\|holin	holin	M1FN85	Enterobacteria_phage	4.2e-31	91.5
AYE43849.1\|227995_228559_-	ORF6N domain-containing protein	Q8HA19	Enterobacteria_phage	2.6e-40	56.9
AYE43850.1\|228810_229035_-	hypothetical protein	NA	NA	NA	NA
AYE43851.1\|229039_229426_-	antitermination protein	Q777W5	Enterobacteria_phage	1.1e-58	83.9
AYE43852.1\|229415_229787_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	8.0e-38	64.0
AYE43853.1\|229786_230029_-	hypothetical protein	Q8W639	Enterobacteria_phage	3.9e-33	95.0
AYE43854.1\|230040_231432_-	replicative DNA helicase	Q8W640	Enterobacteria_phage	7.0e-260	96.8
AYE43855.1\|231547_232776_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	6.3e-172	96.3
AYE47980.1\|232851_234231_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AYE43856.1\|234569_234788_-	DNA invertase	A0A1S6L009	Salmonella_phage	4.6e-09	70.0
AYE43857.1\|235141_236620_-	hypothetical protein	NA	NA	NA	NA
AYE43858.1\|238377_239805_+	DUF4102 domain-containing protein	NA	NA	NA	NA
AYE43859.1\|239791_240478_+	hypothetical protein	NA	NA	NA	NA
AYE47981.1\|240619_240808_+	DNA-binding protein	NA	NA	NA	NA
AYE43860.1\|240818_241481_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
AYE43861.1\|241473_241794_+	hypothetical protein	NA	NA	NA	NA
AYE43862.1\|241800_242100_+	DUF4222 domain-containing protein	NA	NA	NA	NA
AYE43863.1\|242096_243914_+	DNA primase	Q7M2A8	Enterobacteria_phage	5.7e-129	50.4
AYE43864.1\|244411_244621_+	hypothetical protein	NA	NA	NA	NA
AYE43865.1\|244617_246531_+	peptidase	S5M7Q8	Escherichia_phage	1.0e-213	57.1
AYE43866.1\|247572_248058_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	3.9e-48	66.9
AYE43867.1\|248060_248342_+	hypothetical protein	NA	NA	NA	NA
AYE43868.1\|250061_250565_-\|transposase	IS1 family transposase	U5P0U6	Shigella_phage	1.1e-93	98.8
AYE43869.1\|250483_250759_-\|transposase	IS1 family transposase	Q71TE9	Escherichia_phage	2.0e-46	98.9

DBSCAN-SWA_3

284677 : 377526

101

Shigella_phage(43.75%)

head,plate,tRNA,transposase,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE43903.1\|284677_287308_-\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	5.5e-80	38.6
AYE43904.1\|287435_287936_-	recombination regulator RecX	NA	NA	NA	NA
AYE43905.1\|288163_289225_-	DNA recombination/repair protein RecA	A0A2D1GPX2	Mycobacterium_phage	1.2e-113	63.4
AYE43906.1\|289304_289802_-	nicotinamide-nucleotide amidohydrolase PncC	B5TK85	Pseudomonas_phage	4.4e-31	49.7
AYE43907.1\|289946_291032_-	murein transglycosylase	NA	NA	NA	NA
AYE43908.1\|291287_291851_+	glucitol/sorbitol permease IIC component	NA	NA	NA	NA
AYE43909.1\|291847_292807_+	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA
AYE43910.1\|292817_293189_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
AYE43911.1\|294066_294426_+	glucitol operon activator protein	NA	NA	NA	NA
AYE43912.1\|294492_295266_+	DNA-binding transcriptional repressor	NA	NA	NA	NA
AYE43913.1\|295258_296224_+	arabinose-5-phosphate isomerase GutQ	A0A2P0VNK5	Tetraselmis_virus	2.3e-36	33.9
AYE43914.1\|296220_297735_-	NorR family transcriptional regulator	NA	NA	NA	NA
AYE43915.1\|297921_299361_+	anaerobic nitric oxide reductase flavorubredoxin	NA	NA	NA	NA
AYE43916.1\|299357_300491_+	NADH:flavorubredoxin reductase NorW	NA	NA	NA	NA
AYE43917.1\|300618_302871_-	carbamoyltransferase HypF	NA	NA	NA	NA
AYE43918.1\|303023_303551_-	electron transporter HydN	NA	NA	NA	NA
AYE47982.1\|303697_304708_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.0e-26	28.3
AYE43919.1\|304967_306425_+	PTS cellobiose/arbutin/salicin transporter subunit IIBC	NA	NA	NA	NA
AYE47983.1\|306433_307858_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
AYE43920.1\|307971_308391_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYE43921.1\|308387_308699_-	cytoplasmic protein	NA	NA	NA	NA
AYE43922.1\|308860_309634_-	hypothetical protein	NA	NA	NA	NA
AYE43923.1\|309658_310129_-	hydrogenase 3 maturation endopeptidase HyCI	NA	NA	NA	NA
AYE43924.1\|310121_310532_-	formate hydrogenlyase maturation protein HycH	NA	NA	NA	NA
AYE43925.1\|310528_311296_-	NADH-quinone oxidoreductase subunit NuoB	NA	NA	NA	NA
AYE43926.1\|311295_311838_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AYE43927.1\|311847_313545_-	hydrogenase large subunit	NA	NA	NA	NA
AYE43928.1\|313562_314486_-	hydrogenase 3 membrane subunit	NA	NA	NA	NA
AYE43929.1\|315738_316476_-	protein mom	A0A0C4UQZ7	Shigella_phage	1.4e-102	77.3
AYE43930.1\|316429_316630_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYE47984.1\|316919_317180_+	hypothetical protein	NA	NA	NA	NA
AYE43931.1\|317347_317602_-	DUF826 domain-containing protein	NA	NA	NA	NA
AYE43932.1\|317637_317820_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	5.0e-09	52.6
AYE43933.1\|317964_320019_-	sialate O-acetylesterase	S5MDQ7	Escherichia_phage	1.1e-234	65.1
AYE47985.1\|320323_320845_+\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	1.5e-42	46.2
AYE43934.1\|320876_321758_-\|tail	phage tail protein	C9DGQ8	Escherichia_phage	1.6e-28	39.9
AYE43935.1\|321757_322318_-	DUF2313 domain-containing protein	C9DGQ7	Escherichia_phage	6.0e-45	49.7
AYE43936.1\|322308_323391_-\|plate	baseplate J/gp47 family protein	A0A0C4UQU9	Shigella_phage	1.4e-98	53.2
AYE43937.1\|323390_323828_-	hypothetical protein	A0A0C4UR04	Shigella_phage	7.7e-40	56.9
AYE43938.1\|323820_324435_-\|plate	phage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	5.6e-52	50.8
AYE43939.1\|324424_325549_-\|tail	phage tail protein	C9DGQ3	Escherichia_phage	1.7e-94	47.4
AYE43940.1\|325532_326891_-	multidrug DMT transporter permease	A0A0C4UR32	Shigella_phage	9.8e-49	30.1
AYE43941.1\|326877_328935_-\|tail	tail tape measure protein	A0A0C4UQU8	Shigella_phage	1.1e-75	38.9
AYE43942.1\|329062_329542_-	hypothetical protein	A0A0C4UR03	Shigella_phage	2.3e-21	49.2
AYE43943.1\|329556_329922_-\|tail	phage tail protein	NA	NA	NA	NA
AYE43944.1\|329930_331433_-\|tail	phage tail protein	A0A0C4UQS0	Shigella_phage	1.2e-132	51.1
AYE43945.1\|331432_331711_-	DUF2635 domain-containing protein	NA	NA	NA	NA
AYE43946.1\|331714_332278_-	DUF1834 family protein	A0A0C4UQU7	Shigella_phage	6.3e-42	47.1
AYE43947.1\|332274_332694_-	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	4.7e-34	54.3
AYE43948.1\|332690_333050_-	hypothetical protein	NA	NA	NA	NA
AYE43949.1\|333093_334041_-\|head	head protein	A0A0C4UQR9	Shigella_phage	2.7e-122	66.9
AYE43950.1\|334040_335174_-\|protease	protease	A0A0C4UQU6	Shigella_phage	1.4e-88	51.4
AYE43951.1\|335350_335824_-	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	4.6e-38	54.6
AYE43952.1\|335945_337277_-\|head	phage head morphogenesis protein	A0A0C4UQY9	Shigella_phage	2.9e-154	58.7
AYE43953.1\|337260_338850_-	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	7.2e-168	57.9
AYE43954.1\|338849_340514_-	hypothetical protein	A0A0C4UR29	Shigella_phage	4.8e-231	73.2
AYE43955.1\|340513_340762_-	hypothetical protein	NA	NA	NA	NA
AYE43956.1\|340772_341354_-	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	4.2e-49	57.0
AYE43957.1\|341356_341647_-	ArsR family transcriptional regulator	A0A0C4UR00	Shigella_phage	2.1e-25	63.2
AYE43958.1\|341639_341951_-	DUF2730 family protein	NA	NA	NA	NA
AYE43959.1\|341931_342159_-	TraR/DksA family transcriptional regulator	M4MHG5	Vibrio_phage	4.2e-05	41.2
AYE43960.1\|342169_342637_-	lysozyme	B6SD19	Bacteriophage	7.8e-14	50.7
AYE43961.1\|342834_343335_-	lysozyme	B6SD29	Bacteriophage	1.3e-27	43.2
AYE43962.1\|343406_343829_-	transcriptional regulator	NA	NA	NA	NA
AYE43963.1\|343899_344412_-	DUF1018 domain-containing protein	A0A0C4UQU3	Shigella_phage	1.8e-27	48.3
AYE43964.1\|344476_344887_+	DUF2513 domain-containing protein	NA	NA	NA	NA
AYE43965.1\|344848_345157_-	hypothetical protein	NA	NA	NA	NA
AYE43966.1\|345172_345523_-	hypothetical protein	NA	NA	NA	NA
AYE43967.1\|345519_345849_-	hypothetical protein	NA	NA	NA	NA
AYE43968.1\|345845_346397_-	AsnC family protein	NA	NA	NA	NA
AYE43969.1\|346400_346916_-	hypothetical protein	C9DGM0	Escherichia_phage	9.1e-48	55.4
AYE43970.1\|346915_347449_-	hypothetical protein	A0A0C4UQU2	Shigella_phage	3.7e-68	68.4
AYE43971.1\|347594_348125_-	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	2.5e-48	57.1
AYE43972.1\|348136_348430_-	hypothetical protein	NA	NA	NA	NA
AYE43973.1\|348434_348707_-	hypothetical protein	NA	NA	NA	NA
AYE43974.1\|348703_348985_-	host nuclease inhibitor protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
AYE43975.1\|348986_349241_-	hypothetical protein	NA	NA	NA	NA
AYE43976.1\|349253_349475_-	hypothetical protein	NA	NA	NA	NA
AYE43977.1\|349477_350410_-	transcriptional regulator	A0A0C4UQR3	Shigella_phage	1.2e-69	48.3
AYE43978.1\|350485_352576_-\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	1.8e-166	45.4
AYE43979.1\|352586_352853_-	transcriptional regulator	M1PVU4	Vibrio_phage	1.4e-07	46.0
AYE43980.1\|353009_353621_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYE43981.1\|354682_355294_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AYE43982.1\|355418_355880_-	formate hydrogenlyase regulatory protein HycA	NA	NA	NA	NA
AYE47986.1\|356091_356442_+	protein HypA	NA	NA	NA	NA
AYE43983.1\|356445_357318_+	hydrogenase isoenzymes nickel incorporation protein HypB	NA	NA	NA	NA
AYE43984.1\|357308_357581_+	hydrogenase assembly protein HypC	NA	NA	NA	NA
AYE43985.1\|357580_358702_+	hydrogenase formation protein HypD	NA	NA	NA	NA
AYE43986.1\|358698_359709_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
AYE43987.1\|361896_362250_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
AYE43988.1\|362536_365098_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
AYE43989.1\|366687_367455_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.3e-70	56.7
AYE43990.1\|367650_368559_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	8.6e-118	76.5
AYE43991.1\|368555_369818_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.4e-134	61.2
AYE43992.1\|369814_370453_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AYE43993.1\|370457_371234_+	HPr family phosphocarrier protein	NA	NA	NA	NA
AYE43994.1\|371322_372687_+	GntP family transporter	NA	NA	NA	NA
AYE43995.1\|373835_374975_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AYE43996.1\|375114_375741_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AYE43997.1\|375734_376496_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
AYE43998.1\|376476_377526_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA

DBSCAN-SWA_4

386032 : 436404

Acinetobacter_phage(37.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE44008.1\|386032_387229_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AYE44009.1\|387223_387418_-	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA
AYE44010.1\|387399_388146_-	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA
AYE44011.1\|388156_389212_-	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA
AYE44012.1\|389223_389760_-	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA
AYE44013.1\|391086_393786_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
AYE44014.1\|393980_394133_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
AYE44015.1\|394397_395132_-	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA
AYE44016.1\|395206_396919_-	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
AYE44017.1\|396918_398718_-	NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA	NA	NA	NA
AYE44018.1\|399033_399399_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AYE44019.1\|399476_400748_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AYE44020.1\|400738_400999_+	ferredoxin family protein	NA	NA	NA	NA
AYE44021.1\|401015_401591_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
AYE44022.1\|401738_402599_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
AYE44023.1\|402595_403375_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
AYE44024.1\|403352_404690_-	MFS transporter	NA	NA	NA	NA
AYE44025.1\|404783_406238_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AYE44026.1\|407441_408719_+	MFS transporter	NA	NA	NA	NA
AYE44027.1\|411980_412652_-	7-carboxy-7-deazaguanine synthase QueE	A0A2I7S8X1	Vibrio_phage	1.7e-14	25.0
AYE44028.1\|412790_412901_+	hypothetical protein	NA	NA	NA	NA
AYE44029.1\|412952_414006_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.7e-61	46.3
AYE44030.1\|414058_414361_+\|transposase	transposase	NA	NA	NA	NA
AYE44031.1\|414306_414783_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.4e-20	37.4
AYE44032.1\|414839_415995_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.6e-66	44.7
AYE44033.1\|416105_416855_+	YgcG family protein	NA	NA	NA	NA
AYE44034.1\|417871_419200_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE44035.1\|419254_420553_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.0e-131	58.8
AYE44036.1\|420640_422278_-	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.8e-153	50.4
AYE44037.1\|422505_423297_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
AYE44038.1\|423367_423703_-	mRNA interferase MazF	NA	NA	NA	NA
AYE44039.1\|423702_423951_-	MazF-MazE toxin-antitoxin system antitoxin MazE	NA	NA	NA	NA
AYE44040.1\|424036_426271_-	GTP pyrophosphokinase	NA	NA	NA	NA
AYE44041.1\|426318_427620_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.7e-37	29.8
AYE44042.1\|427676_430433_+	signal transduction histidine kinase	A0A1V0SGX0	Hokovirus	6.4e-55	30.6
AYE44043.1\|430664_432005_-	glucarate dehydratase	NA	NA	NA	NA
AYE44044.1\|432025_433366_-	glucarate dehydratase-related protein	NA	NA	NA	NA
AYE44045.1\|433367_434720_-	MFS transporter	NA	NA	NA	NA
AYE44046.1\|435154_435604_-	flavodoxin	NA	NA	NA	NA
AYE44047.1\|435621_436404_-\|tRNA	tRNA pseudouridine(65) synthase TruC	NA	NA	NA	NA

DBSCAN-SWA_5

593560 : 637997

Staphylococcus_phage(50.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE44174.1\|593560_594319_+\|protease	metalloprotease	NA	NA	NA	NA
AYE44175.1\|594461_595382_-	agmatinase	NA	NA	NA	NA
AYE44176.1\|595519_597496_-	arginine decarboxylase	NA	NA	NA	NA
AYE44177.1\|597504_597636_-	virulence promoting factor	NA	NA	NA	NA
AYE44178.1\|597771_597987_+	hypothetical protein	NA	NA	NA	NA
AYE44179.1\|597983_598235_-	DUF2684 family protein	NA	NA	NA	NA
AYE44180.1\|598290_599445_+	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
AYE44181.1\|599880_601275_+	galactose-proton symporter	NA	NA	NA	NA
AYE44182.1\|601351_601849_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
AYE44183.1\|601943_602651_+	endonuclease-1	NA	NA	NA	NA
AYE44184.1\|602730_603462_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AYE44185.1\|603474_604425_+	glutathione synthetase	NA	NA	NA	NA
AYE44186.1\|604533_605097_+	YqgE/AlgH family protein	NA	NA	NA	NA
AYE44187.1\|605096_605513_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
AYE44188.1\|605687_606668_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
AYE44189.1\|606685_607390_+	YggS family pyridoxal phosphate enzyme	NA	NA	NA	NA
AYE44190.1\|607407_607974_+	YggT family protein	NA	NA	NA	NA
AYE44191.1\|607970_608261_+	YggU family protein	NA	NA	NA	NA
AYE44192.1\|608268_608862_+	XTP/dITP diphosphatase	NA	NA	NA	NA
AYE44193.1\|608854_609991_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
AYE44194.1\|610301_611288_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AYE44195.1\|611332_611548_+	TRAP transporter small permease subunit	NA	NA	NA	NA
AYE44196.1\|613001_614033_-\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE44197.1\|617628_618675_-	L-asparaginase 2	NA	NA	NA	NA
AYE44198.1\|618850_619570_-	DUF2884 family protein	NA	NA	NA	NA
AYE44199.1\|619753_620080_-	DUF469 domain-containing protein	NA	NA	NA	NA
AYE44200.1\|620079_620799_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
AYE44201.1\|620959_622012_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AYE44202.1\|622039_622315_+	Fe(2+)-trafficking protein	NA	NA	NA	NA
AYE44203.1\|622379_623459_+	lytic murein transglycosylase	NA	NA	NA	NA
AYE44204.1\|623660_624917_+	nucleoside permease NupG	NA	NA	NA	NA
AYE44205.1\|625350_626478_+\|transposase	IS110-like element ISSso6 family transposase	NA	NA	NA	NA
AYE44206.1\|626674_628612_-	ornithine decarboxylase	NA	NA	NA	NA
AYE44207.1\|628783_628909_-	capsular biosynthesis protein	NA	NA	NA	NA
AYE44208.1\|629019_629727_+	DUF554 domain-containing protein	NA	NA	NA	NA
AYE44209.1\|631214_632234_+\|transposase	IS110 family transposase ISEc11	NA	NA	NA	NA
AYE44210.1\|632909_633173_-	hypothetical protein	NA	NA	NA	NA
AYE44211.1\|633261_636777_+	DNA helicase	NA	NA	NA	NA
AYE44212.1\|636841_637997_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1

DBSCAN-SWA_6

1177799 : 1186488

uncultured_Caudovirales_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE44695.1\|1177799_1178153_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	9.7e-25	50.9
AYE44696.1\|1178206_1179496_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	4.6e-173	73.5
AYE44697.1\|1179508_1179934_+	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-51	70.7
AYE44698.1\|1180067_1180364_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AYE44699.1\|1180835_1182008_+\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE44700.1\|1182004_1182805_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE44701.1\|1183868_1185024_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE44702.1\|1185215_1186488_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3

DBSCAN-SWA_7

1247096 : 1288240

Escherichia_phage(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE44750.1\|1247096_1248305_+\|transposase	transposase	A0A077SL42	Escherichia_phage	1.6e-207	92.8
AYE44751.1\|1248553_1249003_-	hypothetical protein	NA	NA	NA	NA
AYE44752.1\|1249111_1249459_+	DUF202 domain-containing protein	NA	NA	NA	NA
AYE44753.1\|1249448_1249811_+	DUF202 domain-containing protein	NA	NA	NA	NA
AYE44754.1\|1249807_1250305_+	radical SAM protein	NA	NA	NA	NA
AYE44755.1\|1250312_1251497_-	multidrug efflux MFS transporter EmrD	S4TR35	Salmonella_phage	6.8e-14	23.5
AYE44756.1\|1251776_1251866_-	type I toxin-antitoxin system toxin TisB	NA	NA	NA	NA
AYE44757.1\|1251998_1252157_-	hypothetical protein	NA	NA	NA	NA
AYE44758.1\|1252153_1252444_-	hypothetical protein	NA	NA	NA	NA
AYE44759.1\|1252430_1252529_+	ilvB operon leader peptide IvbL	NA	NA	NA	NA
AYE44760.1\|1252634_1254323_+	acetolactate synthase large subunit	E5EQ70	Micromonas_sp._RCC1109_virus	6.0e-56	29.4
AYE44761.1\|1254326_1254617_+	acetolactate synthase isozyme 1 small subunit	NA	NA	NA	NA
AYE44762.1\|1254691_1255282_+	DNA-binding response regulator	NA	NA	NA	NA
AYE44763.1\|1255281_1256784_+	signal transduction histidine-protein kinase/phosphatase UhpB	NA	NA	NA	NA
AYE44764.1\|1256793_1258113_+	MFS transporter family glucose-6-phosphate receptor UhpC	NA	NA	NA	NA
AYE44765.1\|1258250_1259642_+	hexose phosphate transporter	NA	NA	NA	NA
AYE44766.1\|1259686_1261453_-	adenine deaminase	NA	NA	NA	NA
AYE44767.1\|1261549_1261738_+	sulfate permease	NA	NA	NA	NA
AYE44768.1\|1263414_1263867_+	DUF1198 domain-containing protein	NA	NA	NA	NA
AYE44769.1\|1263887_1264079_-	hypothetical protein	NA	NA	NA	NA
AYE44770.1\|1265298_1265592_-	hypothetical protein	NA	NA	NA	NA
AYE48015.1\|1265628_1265817_+	hypothetical protein	NA	NA	NA	NA
AYE44771.1\|1265813_1266581_+	lipoprotein NlpA	NA	NA	NA	NA
AYE44772.1\|1267343_1267550_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	9.3e-28	91.2
AYE44773.1\|1267565_1267964_-	hypothetical protein	A0A0N7C1X7	Escherichia_phage	9.1e-64	97.6
AYE44774.1\|1268049_1268325_-	hypothetical protein	A0A0N7C1Z2	Escherichia_phage	3.6e-43	94.5
AYE48016.1\|1268288_1269185_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-60	49.3
AYE44775.1\|1269689_1269980_-	hypothetical protein	NA	NA	NA	NA
AYE44776.1\|1271500_1271698_+	hypothetical protein	NA	NA	NA	NA
AYE44777.1\|1271683_1273963_-	TonB-dependent receptor	NA	NA	NA	NA
AYE44778.1\|1273884_1275222_-	lysine 6-monooxygenase	NA	NA	NA	NA
AYE44779.1\|1275218_1276961_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AYE44780.1\|1276960_1277908_-	N-acetyltransferase	NA	NA	NA	NA
AYE48017.1\|1277908_1279696_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AYE44781.1\|1279768_1280962_+	MFS transporter	NA	NA	NA	NA
AYE44782.1\|1280911_1281838_-\|transposase	transposase	NA	NA	NA	NA
AYE44783.1\|1283353_1284510_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE44784.1\|1287067_1288240_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	4.9e-230	99.7

DBSCAN-SWA_8

1348279 : 1416282

Acidithiobacillus_phage(18.18%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE44835.1\|1348279_1348753_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
AYE44836.1\|1348948_1350139_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA
AYE44837.1\|1350135_1350912_-	transcriptional regulator LldR	NA	NA	NA	NA
AYE44838.1\|1350911_1352567_-	L-lactate permease	NA	NA	NA	NA
AYE44839.1\|1357827_1358379_-	DUF3251 domain-containing protein	NA	NA	NA	NA
AYE44840.1\|1358870_1358963_+	IS1 encoded protein	NA	NA	NA	NA
AYE44841.1\|1359048_1359411_-	YibL family ribosome-associated protein	NA	NA	NA	NA
AYE44842.1\|1359695_1359905_+	hypothetical protein	NA	NA	NA	NA
AYE44843.1\|1359916_1360504_-	MltR family transcriptional regulator	NA	NA	NA	NA
AYE44844.1\|1360503_1361652_-	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
AYE44845.1\|1361881_1363795_-	PTS mannitol transporter subunit IICBA	NA	NA	NA	NA
AYE44846.1\|1364331_1364694_+	DUF3302 domain-containing protein	NA	NA	NA	NA
AYE44847.1\|1364832_1365507_-\|transposase	transposase	K4HZD4	Acidithiobacillus_phage	4.9e-33	37.9
AYE44848.1\|1365523_1367059_-\|transposase	IS21-like element ISSso4 family transposase	K4I413	Acidithiobacillus_phage	1.7e-102	40.7
AYE44849.1\|1367231_1368395_+	HlyD family secretion protein	NA	NA	NA	NA
AYE44850.1\|1368854_1369292_-	hypothetical protein	NA	NA	NA	NA
AYE44851.1\|1373783_1374392_+	glutathione S-transferase	NA	NA	NA	NA
AYE44852.1\|1374489_1375881_+\|tRNA	L-selenocysteinyl-tRNA(Sec) synthase	NA	NA	NA	NA
AYE44853.1\|1375877_1377722_+\|tRNA	selenocysteinyl-tRNA-specific translation elongation factor SelB	A0A2H4UTS4	Bodo_saltans_virus	6.9e-05	29.0
AYE44854.1\|1378538_1379861_+	xylose isomerase	NA	NA	NA	NA
AYE44855.1\|1379932_1380244_+	hypothetical protein	NA	NA	NA	NA
AYE44856.1\|1381698_1382040_+	hypothetical protein	NA	NA	NA	NA
AYE44857.1\|1382085_1382271_+	hypothetical protein	NA	NA	NA	NA
AYE44858.1\|1382241_1383515_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE44859.1\|1383753_1384909_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE44860.1\|1384958_1385126_+	hypothetical protein	NA	NA	NA	NA
AYE44861.1\|1385167_1386163_-	O-acetyltransferase	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	9.1e-12	26.7
AYE44862.1\|1386402_1387434_-\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE44863.1\|1387519_1387792_+	hypothetical protein	NA	NA	NA	NA
AYE44864.1\|1387886_1388798_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AYE44865.1\|1388807_1390877_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AYE44866.1\|1391202_1391355_+	Hok/Gef family protein	NA	NA	NA	NA
AYE44867.1\|1391542_1391755_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.7e-22	72.9
AYE44868.1\|1392035_1392326_-	transcriptional regulator	NA	NA	NA	NA
AYE44869.1\|1392759_1393470_+	DUF3053 domain-containing protein	NA	NA	NA	NA
AYE44870.1\|1393519_1394494_-	bifunctional glyoxylate/hydroxypyruvate reductase B	NA	NA	NA	NA
AYE44871.1\|1394597_1395257_-	OmpA family lipoprotein	NA	NA	NA	NA
AYE44872.1\|1396677_1399011_+	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	A0A077SK27	Escherichia_phage	3.7e-72	29.8
AYE44873.1\|1398979_1399420_-	N-acetyltransferase	NA	NA	NA	NA
AYE44874.1\|1399416_1399980_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AYE44875.1\|1400137_1400836_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AYE44876.1\|1400891_1401071_-	hypothetical protein	NA	NA	NA	NA
AYE44877.1\|1401064_1402273_+	oxalate/formate antiport family MFS transporter	NA	NA	NA	NA
AYE48019.1\|1402596_1404288_+	phosphoethanolamine transferase EptB	NA	NA	NA	NA
AYE44878.1\|1404678_1405017_+	hypothetical protein	NA	NA	NA	NA
AYE44879.1\|1405368_1406976_+	periplasmic dipeptide transporter	NA	NA	NA	NA
AYE44880.1\|1407038_1407266_-	hypothetical protein	NA	NA	NA	NA
AYE44881.1\|1407283_1408303_+	peptide ABC transporter permease	NA	NA	NA	NA
AYE44882.1\|1408312_1409215_+	peptide ABC transporter permease	NA	NA	NA	NA
AYE44883.1\|1409225_1410209_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-15	28.8
AYE44884.1\|1410205_1411210_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.0e-20	33.2
AYE44885.1\|1411239_1412511_-	transporter	NA	NA	NA	NA
AYE44886.1\|1412660_1412822_+	hypothetical protein	NA	NA	NA	NA
AYE48020.1\|1412986_1413094_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
AYE44887.1\|1413469_1413577_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
AYE44888.1\|1413861_1414059_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
AYE44889.1\|1414434_1414542_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
AYE44890.1\|1414827_1415025_+	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
AYE44891.1\|1415126_1416282_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1

DBSCAN-SWA_9

1893555 : 1961378

Acinetobacter_phage(21.43%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE45269.1\|1893555_1894828_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	4.0e-177	99.0
AYE45270.1\|1895367_1895547_-	hypothetical protein	NA	NA	NA	NA
AYE45271.1\|1897080_1898727_-	class I fumarate hydratase	NA	NA	NA	NA
AYE45272.1\|1898804_1900145_-	anaerobic C4-dicarboxylate transporter DcuB	NA	NA	NA	NA
AYE45273.1\|1900715_1901435_-	two-component system response regulator DcuR	NA	NA	NA	NA
AYE45274.1\|1901431_1903063_-	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
AYE45275.1\|1903243_1903474_+	4Fe-4S mono-cluster protein YjdI	NA	NA	NA	NA
AYE45276.1\|1903485_1903758_+	N-acetyltransferase	NA	NA	NA	NA
AYE45277.1\|1903984_1904281_+	endoribonuclease GhoS	NA	NA	NA	NA
AYE45278.1\|1904308_1904482_+	GhoT/OrtT family toxin	NA	NA	NA	NA
AYE45279.1\|1904600_1906118_-\|tRNA	lysine--tRNA ligase heat inducible	A0A1V0SAC0	Catovirus	1.6e-87	38.0
AYE45280.1\|1906354_1907812_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.2e-48	29.4
AYE45281.1\|1908945_1910101_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
AYE45282.1\|1911555_1912829_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE45283.1\|1913967_1914315_-	calcium-binding protein	NA	NA	NA	NA
AYE45284.1\|1914426_1915582_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE48041.1\|1915687_1917016_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE45285.1\|1920196_1920415_+	hypothetical protein	NA	NA	NA	NA
AYE45286.1\|1920708_1921284_-	transcriptional regulator	NA	NA	NA	NA
AYE45287.1\|1921320_1923018_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
AYE45288.1\|1922993_1923332_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
AYE45289.1\|1923447_1924749_-	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
AYE45290.1\|1924866_1926303_-	aspartate ammonia-lyase	NA	NA	NA	NA
AYE45291.1\|1926639_1927110_+	membrane protein FxsA	NA	NA	NA	NA
AYE45292.1\|1927131_1928388_-	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
AYE45293.1\|1928663_1928957_+	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
AYE45294.1\|1929000_1930647_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
AYE45295.1\|1930784_1931138_+	DUF4156 domain-containing protein	NA	NA	NA	NA
AYE45296.1\|1931340_1932210_-	hypothetical protein	NA	NA	NA	NA
AYE45297.1\|1932599_1933628_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
AYE45298.1\|1933669_1934236_+	elongation factor P	NA	NA	NA	NA
AYE45299.1\|1934287_1934413_+	entericidin A	NA	NA	NA	NA
AYE45300.1\|1934523_1934670_+	entericidin B	NA	NA	NA	NA
AYE45301.1\|1934844_1935162_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
AYE45302.1\|1935158_1935692_-	hypothetical protein	A0A1W6JNX6	Morganella_phage	2.7e-47	55.0
AYE45303.1\|1935780_1936914_-	BlaEC family class C beta-lactamase	NA	NA	NA	NA
AYE45304.1\|1936976_1937336_-	fumarate reductase subunit D	NA	NA	NA	NA
AYE45305.1\|1937346_1937742_-	fumarate reductase subunit C	NA	NA	NA	NA
AYE45306.1\|1937752_1938487_-	fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
AYE45307.1\|1938479_1940288_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
AYE45308.1\|1940612_1941590_+	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
AYE45309.1\|1941808_1941997_+	transporter	NA	NA	NA	NA
AYE45310.1\|1942720_1944088_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
AYE45311.1\|1944238_1947562_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
AYE45312.1\|1947583_1948552_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
AYE45313.1\|1948648_1949701_-	ribosome small subunit-dependent GTPase	NA	NA	NA	NA
AYE45314.1\|1949795_1950341_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
AYE48042.1\|1950971_1951025_+	hypothetical protein	NA	NA	NA	NA
AYE45315.1\|1951007_1952147_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
AYE45316.1\|1952145_1953693_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
AYE45317.1\|1953664_1954126_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
AYE45318.1\|1954144_1955482_+	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
AYE45319.1\|1955491_1957339_+	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	4.4e-60	41.3
AYE45320.1\|1957331_1958282_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AYE45321.1\|1958367_1958676_+	RNA-binding protein Hfq	NA	NA	NA	NA
AYE45322.1\|1958752_1960033_+	GTPase HflX	NA	NA	NA	NA
AYE45323.1\|1960118_1961378_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	1.2e-05	25.5

DBSCAN-SWA_10

2015594 : 2078874

Enterobacteria_phage(16.67%)

tRNA,protease,integrase,transposase

attL 2032662:2032721|attR 2080997:2081765

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE45376.1\|2015594_2016947_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
AYE45377.1\|2017130_2017517_+	soluble cytochrome b562	NA	NA	NA	NA
AYE45378.1\|2017561_2018026_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	H6WXC9	Vibrio_phage	1.1e-52	59.7
AYE45379.1\|2018183_2020322_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.1e-264	64.4
AYE45380.1\|2020715_2022371_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
AYE45381.1\|2022420_2023842_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
AYE45382.1\|2023960_2024908_-	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
AYE48044.1\|2025092_2025146_+	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA
AYE45383.1\|2025286_2027983_+	magnesium-translocating P-type ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	9.0e-46	27.4
AYE45384.1\|2028188_2028575_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
AYE45385.1\|2028647_2029109_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
AYE45386.1\|2029121_2030057_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.2e-52	40.2
AYE45387.1\|2030060_2030195_-	pyrBI operon leader peptide	NA	NA	NA	NA
AYE45388.1\|2030324_2030507_+	hypothetical protein	NA	NA	NA	NA
AYE45389.1\|2030475_2030871_-	RidA family protein	NA	NA	NA	NA
AYE45390.1\|2031001_2031715_-	SDR family oxidoreductase	NA	NA	NA	NA
AYE45391.1\|2031785_2032379_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
2032662:2032721	attL	NA	NA	NA	NA
AYE45392.1\|2035285_2036305_+	hypothetical protein	NA	NA	NA	NA
AYE45393.1\|2036376_2037381_-	ornithine carbamoyltransferase	NA	NA	NA	NA
AYE45394.1\|2037542_2037959_+	regulator of ribonuclease activity B	NA	NA	NA	NA
AYE45395.1\|2038004_2038508_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYE45396.1\|2039049_2040222_+\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE45397.1\|2040218_2041019_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE45398.1\|2041490_2042687_+	DUF898 domain-containing protein	NA	NA	NA	NA
AYE45399.1\|2042742_2045598_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
AYE48045.1\|2045597_2046041_-	DNA polymerase III subunit chi	NA	NA	NA	NA
AYE45400.1\|2046174_2047686_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
AYE45401.1\|2047952_2049053_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
AYE45402.1\|2049052_2050135_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
AYE45403.1\|2050253_2051756_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	1.8e-83	44.6
AYE45404.1\|2052656_2053976_-	TRAP transporter large permease subunit	NA	NA	NA	NA
AYE45405.1\|2054040_2054805_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYE45406.1\|2054828_2055860_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA
AYE45407.1\|2056076_2056640_+	gluconokinase	NA	NA	NA	NA
AYE45408.1\|2056643_2057663_-	aldehyde reductase Ahr	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	9.3e-44	30.4
AYE45409.1\|2058676_2059833_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE45410.1\|2060110_2061278_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE45411.1\|2061794_2062562_-	iron-dicitrate ABC transporter ATP-binding subunit	G3M9Y6	Bacillus_virus	1.4e-12	24.3
AYE45412.1\|2062562_2063519_-	iron-dicitrate ABC transporter permease FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.8e-17	26.1
AYE45413.1\|2063515_2064514_-	Fe3+ dicitrate ABC transporter permease	NA	NA	NA	NA
AYE45414.1\|2064510_2065413_-	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AYE45415.1\|2065457_2067782_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AYE45416.1\|2067868_2068822_-	fec operon regulator FecR	NA	NA	NA	NA
AYE45417.1\|2068818_2069340_-	RNA polymerase sigma factor FecI	NA	NA	NA	NA
AYE45418.1\|2070422_2071119_+\|transposase	IS1-like element IS1A family transposase	A0A077SLN4	Escherichia_phage	1.4e-131	98.7
AYE45419.1\|2071867_2072125_+	biofilm development YmgB/AriR family protein	NA	NA	NA	NA
AYE45420.1\|2073189_2074170_-	sialate O-acetylesterase	Q08JA2	Stx2-converting_phage	2.7e-101	56.6
AYE45421.1\|2074234_2075341_-	N-acetylneuraminate epimerase	NA	NA	NA	NA
AYE45422.1\|2075360_2076077_-	N-acetylneuraminic acid outer membrane channel protein NanC	NA	NA	NA	NA
AYE45423.1\|2076441_2076591_+	hypothetical protein	NA	NA	NA	NA
AYE45424.1\|2077751_2078045_-	hypothetical protein	NA	NA	NA	NA
AYE45425.1\|2078304_2078874_+\|integrase	integrase	A0A2L1IV36	Escherichia_phage	9.4e-54	53.5
2080997:2081765	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2355768 : 2500027

118

Shigella_phage(11.54%)

plate,tRNA,transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE45646.1\|2355768_2357193_+\|protease	periplasmic serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-26	28.8
AYE45647.1\|2357347_2358505_+	CdaR family transcriptional regulator	NA	NA	NA	NA
AYE45648.1\|2358593_2358980_-	DUF3461 family protein	NA	NA	NA	NA
AYE45649.1\|2359141_2359954_-	phosphodiesterase YaeI	NA	NA	NA	NA
AYE45650.1\|2360008_2360833_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AYE45651.1\|2360863_2363536_-	bifunctional uridylyltransferase/uridylyl-removing protein	NA	NA	NA	NA
AYE45652.1\|2363597_2364392_-	methionine aminopeptidase	NA	NA	NA	NA
AYE45653.1\|2364759_2365485_+	30S ribosomal protein S2	NA	NA	NA	NA
AYE45654.1\|2365742_2366594_+	elongation factor Ts	NA	NA	NA	NA
AYE45655.1\|2366740_2367466_+	UMP kinase	NA	NA	NA	NA
AYE45656.1\|2367757_2368315_+	ribosome-recycling factor	NA	NA	NA	NA
AYE45657.1\|2368406_2369603_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
AYE45658.1\|2369791_2370550_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	7.7e-27	44.4
AYE45659.1\|2370562_2371420_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AYE45660.1\|2371431_2372784_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
AYE45661.1\|2372813_2375246_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AYE45662.1\|2375367_2375853_+	chaperone protein Skp	NA	NA	NA	NA
AYE45663.1\|2375856_2376882_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AYE45664.1\|2376986_2377442_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AYE45665.1\|2377445_2378234_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AYE45666.1\|2378233_2379382_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AYE45667.1\|2379378_2379975_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	40.0
AYE45668.1\|2380011_2383494_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	7.4e-210	37.0
AYE45669.1\|2383506_2384466_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AYE45670.1\|2384514_2385843_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE45671.1\|2386003_2388145_+	lysine decarboxylase LdcC	NA	NA	NA	NA
AYE45672.1\|2388201_2388591_+	VOC family protein	NA	NA	NA	NA
AYE45673.1\|2388655_2389954_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AYE48056.1\|2390002_2390257_-	Rho-binding antiterminator	NA	NA	NA	NA
AYE45674.1\|2390617_2391163_+	YaeQ family protein	NA	NA	NA	NA
AYE45675.1\|2391594_2392305_+	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
AYE45676.1\|2392459_2393284_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
AYE45677.1\|2393336_2395055_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AYE45678.1\|2395165_2395873_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AYE45679.1\|2395869_2396274_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
AYE45680.1\|2396391_2397207_-	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AYE45681.1\|2397246_2397900_-	methionine ABC transporter	NA	NA	NA	NA
AYE45682.1\|2397892_2398924_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
AYE45683.1\|2399111_2399687_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AYE45684.1\|2405584_2406388_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	7.1e-39	36.2
AYE45685.1\|2406384_2407299_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYE45686.1\|2407539_2408340_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AYE45687.1\|2408806_2410079_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE45688.1\|2411781_2412537_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AYE45689.1\|2412570_2413293_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AYE45690.1\|2413289_2413757_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
AYE48057.1\|2413821_2414553_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AYE45691.1\|2415091_2415877_+	hypothetical protein	NA	NA	NA	NA
AYE45692.1\|2416013_2416493_-	hypothetical protein	NA	NA	NA	NA
AYE45693.1\|2416502_2417444_-	hypothetical protein	NA	NA	NA	NA
AYE45694.1\|2417487_2417970_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYE45695.1\|2417993_2419346_-	hypothetical protein	NA	NA	NA	NA
AYE45696.1\|2422899_2424378_-	type VI secretion system protein TssA	NA	NA	NA	NA
AYE45697.1\|2424316_2425060_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AYE45698.1\|2427854_2428616_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYE45699.1\|2428620_2429952_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYE45700.1\|2429954_2430479_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYE45701.1\|2430475_2431756_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AYE45702.1\|2431780_2432863_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYE45703.1\|2432826_2434677_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYE45704.1\|2434680_2435094_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYE45705.1\|2436626_2436851_-	hypothetical protein	NA	NA	NA	NA
AYE45706.1\|2436885_2437386_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYE45707.1\|2438082_2438601_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYE45708.1\|2438633_2438771_+	hypothetical protein	NA	NA	NA	NA
AYE45709.1\|2438810_2440427_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.1e-26	25.2
AYE45710.1\|2440641_2442177_+\|transposase	IS21-like element ISSso4 family transposase	K4I413	Acidithiobacillus_phage	1.7e-102	40.7
AYE45711.1\|2442193_2442949_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.4e-44	43.4
AYE45712.1\|2443671_2447889_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.1e-21	44.2
AYE45713.1\|2450194_2450572_+	hypothetical protein	NA	NA	NA	NA
AYE45714.1\|2451040_2452177_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AYE45715.1\|2452218_2452989_-	amidohydrolase	NA	NA	NA	NA
AYE45716.1\|2453142_2453616_+	C-lysozyme inhibitor	NA	NA	NA	NA
AYE45717.1\|2453658_2456103_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AYE45718.1\|2456342_2456921_+	phosphoheptose isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
AYE45719.1\|2457126_2457894_+	class II glutamine amidotransferase	NA	NA	NA	NA
AYE45720.1\|2457864_2458605_-	transpeptidase	NA	NA	NA	NA
AYE45721.1\|2458760_2459039_-	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
AYE45722.1\|2459041_2459302_-	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
AYE45723.1\|2459511_2460261_+	peptidoglycan endopeptidase	A0A1V0DZX6	Clostridioides_phage	1.2e-19	37.7
AYE45724.1\|2461127_2461430_+\|transposase	transposase family protein	NA	NA	NA	NA
AYE45725.1\|2461500_2461998_+\|transposase	transposase	NA	NA	NA	NA
AYE45726.1\|2462120_2463860_-	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
AYE48058.1\|2463819_2464590_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
AYE45727.1\|2464660_2465716_+	DNA polymerase IV	NA	NA	NA	NA
AYE45728.1\|2465712_2466165_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYE45729.1\|2466199_2466463_+	hypothetical protein	NA	NA	NA	NA
AYE45730.1\|2469004_2469619_+	peptide chain release factor H	NA	NA	NA	NA
AYE45731.1\|2469675_2471133_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
AYE45732.1\|2471393_2471852_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AYE45733.1\|2471943_2473188_+	esterase FrsA	NA	NA	NA	NA
AYE45734.1\|2473245_2473647_+	sigma factor-binding protein Crl	NA	NA	NA	NA
AYE45735.1\|2473685_2474741_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	9.1e-119	61.1
AYE45736.1\|2475028_2476132_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AYE45737.1\|2476143_2477397_+	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
AYE45738.1\|2477645_2477960_-	hypothetical protein	NA	NA	NA	NA
AYE45739.1\|2478682_2479018_+	hypothetical protein	NA	NA	NA	NA
AYE45740.1\|2479974_2481006_+\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE48059.1\|2482049_2482325_+\|transposase	IS1 family transposase	Q71TE9	Escherichia_phage	4.5e-46	97.8
AYE45741.1\|2482243_2482747_+\|transposase	IS1 family transposase	U5P0U6	Shigella_phage	9.1e-93	98.2
AYE45742.1\|2482748_2483720_+	hypothetical protein	I7HJD8	Enterobacteria_phage	5.6e-14	32.7
AYE45743.1\|2483763_2485036_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE45744.1\|2485282_2486167_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.8e-52	41.4
AYE45745.1\|2486326_2486920_-	protein RclC	NA	NA	NA	NA
AYE45746.1\|2486931_2487168_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AYE45747.1\|2487276_2488602_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-113	47.8
AYE45748.1\|2488827_2489682_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYE45749.1\|2490209_2490929_+	(Fe-S)-binding protein	NA	NA	NA	NA
AYE45750.1\|2490939_2492367_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
AYE45751.1\|2492359_2493055_+	lactate utilization protein C	NA	NA	NA	NA
AYE45752.1\|2493009_2493222_-	hypothetical protein	NA	NA	NA	NA
AYE45753.1\|2493128_2493326_-	universal stress protein	NA	NA	NA	NA
AYE45754.1\|2493297_2493966_-	hypothetical protein	NA	NA	NA	NA
AYE45755.1\|2494178_2495849_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	6.8e-60	31.1
AYE45756.1\|2495862_2497335_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AYE45757.1\|2497348_2497936_-	transcriptional regulator BetI	NA	NA	NA	NA
AYE48060.1\|2497852_2498068_+	hypothetical protein	NA	NA	NA	NA
AYE45758.1\|2498080_2500027_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	4.3e-21	27.4

DBSCAN-SWA_12

2517173 : 2567091

Vibrio_phage(38.78%)

head,plate,tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE45770.1\|2517173_2518330_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE45771.1\|2518644_2518890_+	hypothetical protein	NA	NA	NA	NA
AYE45772.1\|2518906_2519554_-	hypothetical protein	NA	NA	NA	NA
AYE45773.1\|2520652_2523727_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	97.8
AYE48061.1\|2523849_2524932_-	lactose operon repressor	C6ZCU4	Enterobacteria_phage	7.5e-193	100.0
AYE45774.1\|2525883_2527548_+	bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA	NA	NA	NA
AYE45775.1\|2527549_2528494_+	2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase	NA	NA	NA	NA
AYE45776.1\|2528511_2529378_+	2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase	NA	NA	NA	NA
AYE45777.1\|2529387_2530197_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
AYE45778.1\|2530193_2531144_+	acetaldehyde dehydrogenase	G9E526	Ostreococcus_lucimarinus_virus	8.7e-36	35.2
AYE45779.1\|2531140_2532154_+	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	7.1e-44	30.8
AYE45780.1\|2532938_2533634_-	protein mom	A0A0C4UQZ7	Shigella_phage	1.1e-128	95.7
AYE45781.1\|2533584_2533770_-	Com family DNA-binding transcriptional regulator	A0A0C4UQS3	Shigella_phage	2.9e-20	71.0
AYE45782.1\|2533894_2534521_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	3.9e-69	70.1
AYE45783.1\|2534471_2535875_-\|tail	phage tail protein	Q8W611	Enterobacteria_phage	6.6e-40	45.8
AYE45784.1\|2535861_2536407_-\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	5.1e-73	72.5
AYE48062.1\|2536409_2537087_-\|tail	phage tail protein	A0A0U2SAV1	Escherichia_phage	1.4e-96	76.2
AYE45785.1\|2537513_2538098_-	DUF2313 domain-containing protein	M4M9M8	Vibrio_phage	2.8e-45	45.1
AYE45786.1\|2538082_2539159_-\|plate	baseplate J/gp47 family protein	A0A2I7S9E5	Vibrio_phage	6.9e-90	50.1
AYE45787.1\|2539148_2539601_-	hypothetical protein	A0A2I7S9F0	Vibrio_phage	2.9e-21	41.4
AYE45788.1\|2539597_2540134_-\|plate	phage baseplate assembly protein V	M4MCP6	Vibrio_phage	3.0e-25	40.2
AYE45789.1\|2540124_2541195_-\|tail	phage tail protein	A0A2I7S9G1	Vibrio_phage	4.9e-88	46.9
AYE45790.1\|2541194_2542469_-	multidrug DMT transporter	A0A2I7S9E8	Vibrio_phage	2.2e-79	39.9
AYE45791.1\|2542468_2544262_-\|tail	phage tail protein	M4MHE6	Vibrio_phage	6.7e-122	51.7
AYE45792.1\|2544348_2544744_-	hypothetical protein	A0A0C4UR03	Shigella_phage	1.2e-12	44.5
AYE45793.1\|2544745_2545102_-\|tail	phage tail protein	A0A2P1A4D6	Alteromonadaceae_phage	2.9e-13	35.5
AYE45794.1\|2545111_2546587_-\|tail	phage tail protein	M1Q565	Vibrio_phage	1.1e-154	55.9
AYE45795.1\|2546586_2546772_-	DUF2635 domain-containing protein	NA	NA	NA	NA
AYE45796.1\|2546752_2547364_-	hypothetical protein	M1PJ94	Vibrio_phage	1.6e-35	44.3
AYE45797.1\|2547360_2547903_-	phage morphogenesis protein	A0A2I7S9D7	Vibrio_phage	8.7e-57	62.0
AYE45798.1\|2547902_2548340_-	DUF1320 domain-containing protein	A0A2I7S9E9	Vibrio_phage	7.0e-33	48.3
AYE45799.1\|2548339_2548651_-	hypothetical protein	NA	NA	NA	NA
AYE45800.1\|2548722_2549628_-\|head	phage head protein	M4MB71	Vibrio_phage	1.7e-97	57.1
AYE45801.1\|2549635_2550592_-	peptidase	M1Q578	Vibrio_phage	1.6e-77	47.2
AYE45802.1\|2550806_2551571_-	hypothetical protein	M4M9M5	Vibrio_phage	1.4e-92	60.1
AYE45803.1\|2551563_2553135_-	DUF935 domain-containing protein	A0A2I7S9K0	Vibrio_phage	1.1e-157	57.9
AYE48063.1\|2553131_2554658_-	hypothetical protein	M1NVQ0	Vibrio_phage	6.0e-196	68.4
AYE45804.1\|2554663_2555245_-	DUF3486 family protein	M1PJ86	Vibrio_phage	5.5e-49	54.5
AYE45805.1\|2555234_2555522_-	hypothetical protein	NA	NA	NA	NA
AYE48064.1\|2555524_2555812_-	ArsR family transcriptional regulator	A0A0C4UR00	Shigella_phage	2.7e-25	60.6
AYE45806.1\|2555817_2556123_-	DUF2730 family protein	M1Q558	Vibrio_phage	3.6e-12	38.3
AYE45807.1\|2556107_2556335_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
AYE45808.1\|2556331_2556940_-	hypothetical protein	NA	NA	NA	NA
AYE45809.1\|2556927_2557338_-	hypothetical protein	NA	NA	NA	NA
AYE45810.1\|2557321_2557549_-	hypothetical protein	A0A0C4UQR6	Shigella_phage	6.9e-24	67.1
AYE45811.1\|2557550_2558138_-	peptidoglycan-binding protein	A0A2I7S9B9	Vibrio_phage	1.2e-32	39.4
AYE45812.1\|2558223_2558673_-	transcriptional regulator	A0A0C4UR27	Shigella_phage	2.7e-40	61.1
AYE45813.1\|2558669_2559221_-	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	1.6e-82	79.7
AYE45814.1\|2559294_2559561_+	hypothetical protein	Q38493	Escherichia_phage	4.7e-16	53.5
AYE45815.1\|2559499_2559814_-	hypothetical protein	A0A0C4UQY6	Shigella_phage	7.3e-32	71.7
AYE45816.1\|2559982_2560522_-	hypothetical protein	C9DGL9	Escherichia_phage	7.7e-82	82.4
AYE45817.1\|2560525_2561080_-	hypothetical protein	A0A0C4UQZ6	Shigella_phage	3.4e-109	100.0
AYE45818.1\|2561171_2561696_-	host-nuclease inhibitor protein Gam	A0A0C4UQY5	Shigella_phage	1.4e-88	96.6
AYE45819.1\|2561714_2562002_-	hypothetical protein	A0A0C4UQR4	Shigella_phage	8.1e-46	96.8
AYE45820.1\|2562014_2562434_-	hypothetical protein	A0A0C4UR25	Shigella_phage	1.3e-76	98.6
AYE45821.1\|2562448_2562712_-	hypothetical protein	A0A0C4UQU1	Shigella_phage	2.2e-37	95.4
AYE45822.1\|2562744_2562972_-	hypothetical protein	C9DGL3	Escherichia_phage	2.5e-34	92.0
AYE45823.1\|2562987_2563938_-	transcriptional regulator	A0A0C4UQR3	Shigella_phage	1.5e-56	41.0
AYE45824.1\|2564013_2566110_-\|transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	1.0e-174	48.9
AYE45825.1\|2566111_2566363_-	DNA-binding protein	A0A2D1GNH1	Pseudomonas_phage	3.1e-17	51.8
AYE45826.1\|2566527_2567091_+	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	1.1e-35	55.8

DBSCAN-SWA_13

2652923 : 2718331

Bacillus_phage(17.65%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE45906.1\|2652923_2653547_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9
AYE45907.1\|2653672_2654947_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.7e-132	56.4
AYE45908.1\|2655134_2657489_+\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	1.6e-224	52.4
AYE45909.1\|2657697_2657970_+	DNA-binding protein HU-beta	A7KV42	Bacillus_phage	1.1e-20	58.4
AYE45910.1\|2658161_2660033_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AYE45911.1\|2660352_2661508_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE45912.1\|2661915_2662314_+	long-chain acyl-CoA thioesterase FadM	NA	NA	NA	NA
AYE45913.1\|2662365_2663061_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.9e-88	68.0
AYE45914.1\|2663125_2664826_-	SgrR family transcriptional regulator	NA	NA	NA	NA
AYE45915.1\|2664925_2665744_+	HMP-PP phosphatase	NA	NA	NA	NA
AYE45916.1\|2666383_2668156_+	SmdA family multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	2.0e-49	30.1
AYE45917.1\|2668148_2669930_+	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	5.2e-42	27.2
AYE45918.1\|2670110_2670449_+	nitrogen regulatory protein P-II 2	NA	NA	NA	NA
AYE45919.1\|2670478_2671765_+	ammonia channel	NA	NA	NA	NA
AYE45920.1\|2671813_2672674_-	acyl-CoA thioesterase II	NA	NA	NA	NA
AYE45921.1\|2672891_2673464_+	hypothetical protein	NA	NA	NA	NA
AYE45922.1\|2673494_2673884_-	MGMT family protein	NA	NA	NA	NA
AYE45923.1\|2674184_2674538_+	DUF1428 domain-containing protein	NA	NA	NA	NA
AYE45924.1\|2676291_2676762_-	hypothetical protein	NA	NA	NA	NA
AYE45925.1\|2676877_2677429_-	maltose O-acetyltransferase	NA	NA	NA	NA
AYE45926.1\|2677599_2677818_-	hemolysin expression-modulating protein Hha	NA	NA	NA	NA
AYE45927.1\|2677843_2678218_-	Hha toxicity modulator TomB	NA	NA	NA	NA
AYE45928.1\|2678763_2681913_-	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	6.2e-54	23.9
AYE45929.1\|2681935_2683129_-	MexE family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYE45930.1\|2683270_2683918_+	transcriptional regulator	NA	NA	NA	NA
AYE45931.1\|2683848_2684040_-	hypothetical protein	NA	NA	NA	NA
AYE45932.1\|2684045_2687408_+	mechanosensitive channel MscK	NA	NA	NA	NA
AYE45933.1\|2687619_2687781_-	DUF2496 domain-containing protein	NA	NA	NA	NA
AYE45934.1\|2687794_2688322_-	primosomal replication protein N''	NA	NA	NA	NA
AYE45935.1\|2688391_2688769_+	DUF454 family protein	NA	NA	NA	NA
AYE45936.1\|2688921_2689473_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.7e-31	47.3
AYE45937.1\|2689601_2691527_+	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	5.1e-43	41.5
AYE45938.1\|2691579_2691909_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AYE45939.1\|2691908_2692514_+	recombination protein RecR	NA	NA	NA	NA
AYE45940.1\|2692623_2694498_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.0e-117	38.0
AYE45941.1\|2694678_2695323_+	adenylate kinase	NA	NA	NA	NA
AYE45942.1\|2695454_2696417_+	ferrochelatase	NA	NA	NA	NA
AYE45943.1\|2696413_2697373_-	acetylesterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	2.9e-15	24.7
AYE45944.1\|2697524_2698829_+	inosine/guanosine kinase	NA	NA	NA	NA
AYE45945.1\|2698961_2700638_-	Kef family K(+) transporter	NA	NA	NA	NA
AYE45946.1\|2701012_2702169_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.7e-68	45.1
AYE45947.1\|2703580_2705233_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
AYE45948.1\|2705269_2705749_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
AYE45949.1\|2705764_2706043_-	hypothetical protein	NA	NA	NA	NA
AYE45950.1\|2705952_2706747_-	hypothetical protein	NA	NA	NA	NA
AYE45951.1\|2706884_2707226_+	addiction module antidote protein, HigA family	A0A222YWD7	Escherichia_phage	1.8e-39	74.5
AYE45952.1\|2707440_2709945_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	5.0e-115	38.1
AYE45953.1\|2710206_2711139_+	glutaminase 1	NA	NA	NA	NA
AYE45954.1\|2711141_2712434_+	amino acid permease	NA	NA	NA	NA
AYE45955.1\|2712558_2712966_+	transcriptional regulator	NA	NA	NA	NA
AYE45956.1\|2712966_2713425_-	NfeD family protein	NA	NA	NA	NA
AYE45957.1\|2713421_2714339_-	paraslipin	NA	NA	NA	NA
AYE45958.1\|2714484_2715162_+	iron export ATP-binding protein FetA	G3M9Y6	Bacillus_virus	1.4e-27	34.3
AYE45959.1\|2715148_2715928_+	iron export permease FetB	NA	NA	NA	NA
AYE45960.1\|2715990_2716845_-	co-chaperone YbbN	NA	NA	NA	NA
AYE45961.1\|2716905_2717715_-	short-chain dehydrogenase/reductase	NA	NA	NA	NA
AYE45962.1\|2717704_2718331_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA

DBSCAN-SWA_14

2899221 : 3006874

Escherichia_phage(18.18%)

head,terminase,integrase,transposase,tail,lysis

attL 2926466:2926502|attR 3017612:3017648

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE46115.1\|2899221_2900757_+\|transposase	IS21-like element ISSso4 family transposase	K4I413	Acidithiobacillus_phage	3.9e-102	40.6
AYE46116.1\|2900773_2901529_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.4e-44	43.4
AYE46117.1\|2905829_2907248_-	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	4.0e-61	32.2
AYE46118.1\|2907244_2907754_-	DUF1722 domain-containing protein	NA	NA	NA	NA
AYE46119.1\|2909084_2910566_-	MFS transporter	A0A0P0IY73	Acinetobacter_phage	3.2e-45	28.2
AYE46120.1\|2910836_2911580_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AYE46121.1\|2911602_2912259_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
AYE46122.1\|2912252_2913185_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
AYE46123.1\|2913174_2913909_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA
AYE46124.1\|2913944_2914736_+	endonuclease VIII	A0A1V0CNR6	Kaumoebavirus	2.2e-08	31.5
AYE46125.1\|2914732_2915779_-	AbrB family transcriptional regulator	NA	NA	NA	NA
AYE46126.1\|2915930_2916992_-	type 1 fimbrial protein	NA	NA	NA	NA
AYE46127.1\|2916988_2917720_-	molecular chaperone	NA	NA	NA	NA
AYE46128.1\|2920243_2920810_-	type 1 fimbrial protein	NA	NA	NA	NA
AYE46129.1\|2921199_2922483_-	type II citrate synthase	NA	NA	NA	NA
AYE46130.1\|2922470_2922656_+	hypothetical protein	NA	NA	NA	NA
AYE46131.1\|2922919_2923159_-	hypothetical protein	NA	NA	NA	NA
AYE48071.1\|2923191_2923581_+	succinate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
AYE46132.1\|2923574_2923922_+	succinate dehydrogenase hydrophobic membrane anchor subunit	NA	NA	NA	NA
AYE46133.1\|2923921_2925688_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
AYE46134.1\|2925703_2926420_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
2926466:2926502	attL	NA	NA	NA	NA
AYE46135.1\|2926720_2929522_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AYE46136.1\|2929536_2930754_+	dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex	NA	NA	NA	NA
AYE46137.1\|2930847_2932014_+	succinyl-CoA ligase subunit beta	NA	NA	NA	NA
AYE46138.1\|2932013_2932883_+	succinyl-CoA ligase subunit alpha	NA	NA	NA	NA
AYE46139.1\|2932986_2933709_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYE48072.1\|2933817_2935794_+	PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC	NA	NA	NA	NA
AYE46140.1\|2938468_2938696_+	hypothetical protein	NA	NA	NA	NA
AYE46141.1\|2939291_2940860_+	cytochrome bd-I ubiquinol oxidase subunit 1	NA	NA	NA	NA
AYE46142.1\|2940875_2942015_+	cytochrome bd-I ubiquinol oxidase subunit 2	NA	NA	NA	NA
AYE46143.1\|2942029_2942143_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AYE46144.1\|2942142_2942436_+	cyd operon protein YbgE	NA	NA	NA	NA
AYE46145.1\|2942585_2942990_+	acyl-CoA thioester hydrolase YbgC	NA	NA	NA	NA
AYE46146.1\|2942986_2943679_+	protein TolQ	NA	NA	NA	NA
AYE46147.1\|2943682_2944111_+	protein TolR	NA	NA	NA	NA
AYE46148.1\|2944175_2945408_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AYE46149.1\|2945540_2946833_+	protein TolB	NA	NA	NA	NA
AYE46150.1\|2946867_2947389_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA
AYE46151.1\|2947398_2948190_+	cell division protein CpoB	NA	NA	NA	NA
AYE46152.1\|2950449_2951622_+\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE46153.1\|2951618_2952419_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE46154.1\|2952681_2953401_+	nicotinamide riboside transporter PnuC	A0A126HGA3	Vibrio_phage	9.2e-22	32.7
AYE46155.1\|2953397_2954339_-	zinc transporter ZitB	A0A1V0SED0	Indivirus	7.5e-24	28.4
AYE46156.1\|2954452_2954833_-	hypothetical protein	NA	NA	NA	NA
AYE46157.1\|2955148_2956201_+	3-deoxy-7-phosphoheptulonate synthase AroG	A0A2I6UFP9	Klebsiella_phage	8.9e-82	49.4
AYE46158.1\|2956359_2957112_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
AYE46159.1\|2957314_2958355_-	galactose-1-epimerase	NA	NA	NA	NA
AYE46160.1\|2958348_2959497_-	galactokinase	NA	NA	NA	NA
AYE46161.1\|2959500_2960547_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
AYE46162.1\|2960556_2961573_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.0e-79	46.0
AYE46163.1\|2963363_2964152_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AYE46164.1\|2964280_2964430_+	multidrug efflux pump accessory protein AcrZ	NA	NA	NA	NA
AYE46165.1\|2964595_2965369_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE46166.1\|2965368_2966058_+	molybdenum ABC transporter permease	NA	NA	NA	NA
AYE46167.1\|2966060_2967119_+	molybdenum import ATP-binding protein ModC	G9BWD6	Planktothrix_phage	1.5e-20	35.9
AYE46168.1\|2967119_2967248_-	hydrolase	NA	NA	NA	NA
AYE46169.1\|2967424_2967868_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	9.9e-35	49.3
AYE46170.1\|2967945_2969101_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46171.1\|2969007_2969415_+\|transposase	transposase	NA	NA	NA	NA
AYE46172.1\|2969360_2970269_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.4e-69	45.1
AYE46173.1\|2971047_2971203_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.8e-07	53.2
AYE46174.1\|2971405_2971813_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.7e-28	49.6
AYE46175.1\|2971889_2972117_+	transcriptional regulator	NA	NA	NA	NA
AYE46176.1\|2972126_2972522_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.6e-60	92.2
AYE46177.1\|2973392_2974139_+	DNA replication protein DnaC	V5UQI5	Shigella_phage	2.0e-112	81.7
AYE46178.1\|2974153_2974576_+	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	5.9e-53	76.6
AYE46179.1\|2974805_2975962_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46180.1\|2976425_2977091_+	hypothetical protein	NA	NA	NA	NA
AYE46181.1\|2977261_2977474_+	Hok/Gef family protein	A0A0P0ZAX5	Stx2-converting_phage	4.0e-26	90.0
AYE46182.1\|2977723_2978011_+	hypothetical protein	NA	NA	NA	NA
AYE46183.1\|2978049_2978649_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	8.5e-106	92.0
AYE46184.1\|2978648_2978939_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.5e-47	89.6
AYE46185.1\|2978935_2979490_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.5e-68	69.1
AYE46186.1\|2979758_2980927_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE46187.1\|2981040_2981337_+	hypothetical protein	NA	NA	NA	NA
AYE46188.1\|2981756_2983030_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	7.5e-176	98.7
AYE46189.1\|2982995_2983190_+	hypothetical protein	NA	NA	NA	NA
AYE46190.1\|2983098_2983596_+	lysozyme	A0A0N7KZA0	Stx2-converting_phage	3.9e-88	96.4
AYE46191.1\|2983592_2984063_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	2.2e-72	94.8
AYE46192.1\|2984151_2984661_-	DedA family protein	NA	NA	NA	NA
AYE46193.1\|2984858_2985623_+	hypothetical protein	G8C7P2	Escherichia_phage	5.9e-11	53.8
AYE46194.1\|2985573_2986977_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.8e-186	68.8
AYE46195.1\|2988333_2989077_+\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	5.3e-89	84.4
AYE46196.1\|2989080_2990301_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	4.5e-194	86.1
AYE46197.1\|2990304_2990811_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.7e-70	79.9
AYE46198.1\|2991610_2991742_+	DNA invertase	A0A0C4UR34	Shigella_phage	8.8e-08	84.4
AYE46199.1\|2992001_2992997_+	6-phosphogluconolactonase	NA	NA	NA	NA
AYE46200.1\|2993037_2993991_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYE46201.1\|2994945_2997126_+	hydratase	NA	NA	NA	NA
AYE46202.1\|2997359_2998643_-	putative acyl-CoA thioester hydrolase	NA	NA	NA	NA
AYE46203.1\|2998777_2999182_-	hypothetical protein	K7PMH8	Enterobacteria_phage	1.6e-55	98.2
AYE46204.1\|2999111_3000280_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE46205.1\|3001077_3001296_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AYE46206.1\|3001380_3002004_-	phage antirepressor Ant	A0A0P0ZAZ7	Stx2-converting_phage	2.1e-94	86.0
AYE46207.1\|3002325_3003048_-	hypothetical protein	A0A0P0ZDC0	Stx2-converting_phage	1.5e-85	69.7
AYE46208.1\|3003126_3003657_-	DUF551 domain-containing protein	A0A0H4IU61	Shigella_phage	6.1e-47	73.0
AYE46209.1\|3003874_3005031_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46210.1\|3005046_3006300_+\|tail	phage tail protein	Q8W611	Enterobacteria_phage	1.3e-63	40.2
AYE46211.1\|3006250_3006874_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	5.4e-79	76.5
3017612:3017648	attR	NA	NA	NA	NA

DBSCAN-SWA_15

3144109 : 3207163

Bacillus_phage(25.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE46336.1\|3144109_3144430_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
AYE46337.1\|3144460_3146737_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
AYE48078.1\|3146745_3146967_-	hypothetical protein	NA	NA	NA	NA
AYE46338.1\|3147483_3147702_-	translation initiation factor IF-1	NA	NA	NA	NA
AYE46339.1\|3147986_3148691_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYE46340.1\|3148732_3150454_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	2.9e-21	25.0
AYE46341.1\|3150454_3152221_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.2e-22	22.1
AYE46342.1\|3152343_3153309_-	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	8.5e-63	44.6
AYE46343.1\|3153853_3154348_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
AYE46344.1\|3154482_3158550_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.7e-86	49.2
AYE46345.1\|3158704_3159316_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AYE46346.1\|3159326_3160670_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	3.6e-80	40.6
AYE46347.1\|3160760_3162053_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
AYE46348.1\|3162291_3164736_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	3.9e-221	49.8
AYE46349.1\|3164746_3165364_+	dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
AYE46350.1\|3165365_3166229_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AYE46351.1\|3166264_3166891_-	hydrolase	NA	NA	NA	NA
AYE46352.1\|3167205_3168354_+	MFS transporter	NA	NA	NA	NA
AYE46353.1\|3168563_3169994_+	inner membrane transporter YcaM	NA	NA	NA	NA
AYE46354.1\|3171779_3172370_+	NAD(P)H oxidoreductase	NA	NA	NA	NA
AYE46355.1\|3172451_3173192_-	pyruvate formate lyase-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
AYE46356.1\|3173383_3175666_-	formate acetyltransferase 1	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
AYE46357.1\|3175720_3176578_-	formate transporter FocA	NA	NA	NA	NA
AYE46358.1\|3176983_3178744_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
AYE46359.1\|3178873_3179566_+	DUF421 domain-containing protein	NA	NA	NA	NA
AYE46360.1\|3179764_3180853_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	3.5e-81	46.8
AYE46361.1\|3180923_3182207_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AYE46362.1\|3182350_3183679_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE46363.1\|3183814_3184579_+\|protease	metalloprotease	NA	NA	NA	NA
AYE46364.1\|3184751_3185435_+	cytidylate kinase	NA	NA	NA	NA
AYE46365.1\|3185545_3187219_+	30S ribosomal protein S1	NA	NA	NA	NA
AYE46366.1\|3187378_3187663_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
AYE46367.1\|3189252_3190526_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.0e-177	99.0
AYE46368.1\|3191506_3193255_+	lipid A export ATP-binding/permease MsbA	W8CYL7	Bacillus_phage	2.5e-57	29.8
AYE46369.1\|3193251_3194238_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AYE46370.1\|3194274_3195507_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYE46371.1\|3195558_3195741_+	protein YcaR	NA	NA	NA	NA
AYE46372.1\|3195737_3196484_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AYE46373.1\|3196637_3197531_+	hypothetical protein	NA	NA	NA	NA
AYE46374.1\|3197507_3198287_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
AYE46375.1\|3198422_3199208_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AYE46376.1\|3199204_3200527_+	chromosome partition protein MukF	NA	NA	NA	NA
AYE46377.1\|3200507_3201212_+	chromosome partition protein MukE	NA	NA	NA	NA
AYE46378.1\|3201211_3205672_+	chromosome partition protein MukB	NA	NA	NA	NA
AYE46379.1\|3205834_3207163_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

3457783 : 3586017

119

Acinetobacter_phage(19.51%)

tRNA,tail,integrase,transposase

attL 3457720:3457779|attR 3582914:3584179

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3457720:3457779	attL	NA	NA	NA	NA
AYE46600.1\|3457783_3458939_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46601.1\|3459674_3460831_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46602.1\|3461396_3462971_+	flagellin FliC	NA	NA	NA	NA
AYE46603.1\|3463135_3463855_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AYE46604.1\|3464995_3465184_+	flagellar protein FliZ	NA	NA	NA	NA
AYE46605.1\|3465316_3466117_+	cystine-binding periplasmic protein	NA	NA	NA	NA
AYE46606.1\|3466170_3467202_-\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE46607.1\|3467376_3468363_+	D-cysteine desulfhydrase	NA	NA	NA	NA
AYE46608.1\|3468377_3469046_+	amino acid ABC transporter permease	NA	NA	NA	NA
AYE46609.1\|3469042_3469795_+	L-cystine ABC transporter ATP-binding protein YecC	G9BWD6	Planktothrix_phage	6.0e-32	41.4
AYE46610.1\|3470024_3470747_+	transcriptional regulator SdiA	NA	NA	NA	NA
AYE46611.1\|3470813_3471038_-	DUF2594 family protein	NA	NA	NA	NA
AYE46612.1\|3471496_3472153_+	DNA-binding response regulator	NA	NA	NA	NA
AYE46613.1\|3472149_3473982_+	excinuclease ABC subunit C	NA	NA	NA	NA
AYE46614.1\|3474038_3474587_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AYE46615.1\|3475236_3475902_+	YecA family protein	NA	NA	NA	NA
AYE46616.1\|3475963_3477175_-	tyrosine transporter TyrP	NA	NA	NA	NA
AYE46617.1\|3477365_3477605_+	DUF2492 family protein	NA	NA	NA	NA
AYE46618.1\|3477642_3478140_-	non-heme ferritin	NA	NA	NA	NA
AYE46619.1\|3478164_3478371_+	hypothetical protein	NA	NA	NA	NA
AYE46620.1\|3478481_3480017_+\|transposase	IS21-like element ISSso4 family transposase	K4I413	Acidithiobacillus_phage	1.7e-102	40.7
AYE46621.1\|3480033_3480789_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.4e-44	43.4
AYE46622.1\|3480954_3481278_-	hypothetical protein	NA	NA	NA	NA
AYE46623.1\|3481540_3481627_+	stress response protein AzuC	NA	NA	NA	NA
AYE46624.1\|3481741_3481993_+	DUF2766 domain-containing protein	NA	NA	NA	NA
AYE46625.1\|3482071_3482575_-	non-heme ferritin	NA	NA	NA	NA
AYE46626.1\|3483371_3484361_+	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE46627.1\|3484430_3485945_+	L-arabinose ABC transporter ATP-binding protein AraG	A0A2H4PQG7	Staphylococcus_phage	4.3e-13	27.1
AYE46628.1\|3485959_3486946_+	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
AYE46629.1\|3487112_3487913_+	trehalose-6-phosphate phosphatase	NA	NA	NA	NA
AYE46630.1\|3487887_3489312_+	trehalose-6-phosphate synthase	NA	NA	NA	NA
AYE46631.1\|3489318_3489747_-	universal stress protein UspC	NA	NA	NA	NA
AYE46632.1\|3490526_3490877_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AYE46633.1\|3490879_3491458_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AYE46634.1\|3491583_3492471_+	flagellar motor stator protein MotA	NA	NA	NA	NA
AYE46635.1\|3492467_3493394_+	motility protein B	NA	NA	NA	NA
AYE46636.1\|3493398_3495363_+	chemotaxis protein CheA	NA	NA	NA	NA
AYE46637.1\|3495383_3495887_+	chemotaxis protein CheW	NA	NA	NA	NA
AYE46638.1\|3496031_3497693_+	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	7.6e-11	38.4
AYE46639.1\|3497738_3499340_+	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-15	29.7
AYE46640.1\|3499358_3500219_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
AYE46641.1\|3500221_3501271_+	chemotaxis response regulator protein-glutamate methylesterase	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
AYE46642.1\|3501285_3501675_+	two-component system response regulator	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
AYE46643.1\|3501685_3502330_+	protein phosphatase CheZ	NA	NA	NA	NA
AYE46644.1\|3505891_3507970_+	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
AYE46645.1\|3507969_3508362_+	flagellar biosynthesis protein FlhE	NA	NA	NA	NA
AYE46646.1\|3508481_3508970_-	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
AYE46647.1\|3509146_3510883_-\|tRNA	arginine--tRNA ligase	A0A1V0SIS8	Klosneuvirus	1.1e-84	34.7
AYE46648.1\|3511098_3511665_+	VOC family protein	NA	NA	NA	NA
AYE46649.1\|3511678_3512425_+	copper homeostasis protein CutC	NA	NA	NA	NA
AYE46650.1\|3512812_3513913_+	cytochrome C	NA	NA	NA	NA
AYE46651.1\|3513937_3516367_+	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
AYE46652.1\|3516531_3517503_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AYE46653.1\|3517499_3518243_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	2.7e-24	30.0
AYE46654.1\|3518283_3518679_-	hypothetical protein	NA	NA	NA	NA
AYE46655.1\|3518731_3519079_-	DUF72 domain-containing protein	NA	NA	NA	NA
AYE46656.1\|3519665_3520217_+	recombinase family protein	G8I4U3	Mycobacterium_phage	8.6e-28	40.9
AYE46657.1\|3520585_3521161_+	DNA methylase	NA	NA	NA	NA
AYE46658.1\|3521217_3522373_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46659.1\|3522537_3523356_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.9e-61	45.8
AYE46660.1\|3524219_3524393_-	DUF1737 domain-containing protein	Q5MBW4	Stx1-converting_phage	2.1e-17	95.3
AYE46661.1\|3524653_3524989_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	3.4e-43	73.8
AYE46662.1\|3525269_3525401_-	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
AYE48096.1\|3525436_3525763_-	hypothetical protein	NA	NA	NA	NA
AYE46663.1\|3526255_3527110_-	antitermination protein	K7P7B9	Enterobacteria_phage	9.7e-79	59.0
AYE46664.1\|3527106_3527481_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.9e-35	62.2
AYE46665.1\|3527480_3527723_-	hypothetical protein	Q8W639	Enterobacteria_phage	3.5e-34	95.0
AYE46666.1\|3528072_3528873_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE46667.1\|3528869_3530042_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE48097.1\|3529892_3531195_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE46668.1\|3532497_3533451_+\|tail	phage tail protein	Q8W611	Enterobacteria_phage	2.0e-32	36.7
AYE46669.1\|3533401_3534025_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	6.4e-80	77.5
AYE46670.1\|3534024_3534204_+	hypothetical protein	NA	NA	NA	NA
AYE46671.1\|3534204_3535956_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
AYE46672.1\|3536556_3536805_-	damage-inducible protein DinI	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
AYE46673.1\|3537159_3537726_-	hydrolase	NA	NA	NA	NA
AYE46674.1\|3538035_3539808_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
AYE46675.1\|3539925_3540378_+	NUDIX pyrophosphatase	NA	NA	NA	NA
AYE46676.1\|3540406_3541147_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYE46677.1\|3541181_3541703_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	1.0e-09	34.2
AYE46678.1\|3541704_3542307_-	YebB family permuted papain-like enzyme	NA	NA	NA	NA
AYE48098.1\|3542379_3542445_+	hypothetical protein	NA	NA	NA	NA
AYE46679.1\|3542583_3543195_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AYE46680.1\|3543203_3544214_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.6e-08	24.9
AYE46681.1\|3544360_3545146_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
AYE46682.1\|3545142_3545898_-	Mn2+/Zn2+ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-18	28.3
AYE48099.1\|3545976_3546909_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE46683.1\|3546924_3548247_+	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	6.9e-15	40.9
AYE46684.1\|3548366_3549338_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AYE46685.1\|3549557_3550853_-	alpha-mannosidase	NA	NA	NA	NA
AYE46686.1\|3551624_3551918_-	alpha-mannosidase	NA	NA	NA	NA
AYE46687.1\|3551898_3553284_-	hypothetical protein	NA	NA	NA	NA
AYE46688.1\|3553320_3555189_-	glycosyl hydrolase	NA	NA	NA	NA
AYE48100.1\|3556504_3557299_+	NGG1p interacting factor NIF3	NA	NA	NA	NA
AYE46689.1\|3557358_3558801_-	pyruvate kinase	NA	NA	NA	NA
AYE46690.1\|3558928_3559798_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYE46691.1\|3560135_3561611_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
AYE46692.1\|3561845_3563657_+	phosphogluconate dehydratase	NA	NA	NA	NA
AYE46693.1\|3563693_3564335_+	KHG/KDPG aldolase	NA	NA	NA	NA
AYE46694.1\|3564390_3565569_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AYE46695.1\|3565702_3565993_+	DNA damage-inducible protein YebG	NA	NA	NA	NA
AYE46696.1\|3566059_3566416_+	protein YebF	NA	NA	NA	NA
AYE46697.1\|3566742_3567402_+	tellurite resistance TerB family protein	NA	NA	NA	NA
AYE46698.1\|3567610_3569671_+	oligopeptidase B	NA	NA	NA	NA
AYE46699.1\|3569667_3570330_-	DNA polymerase III subunit epsilon	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
AYE46700.1\|3570353_3571010_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AYE46701.1\|3571111_3571342_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
AYE46702.1\|3571480_3571855_+	CopC domain-containing protein YobA	NA	NA	NA	NA
AYE46703.1\|3571858_3572731_+	hypothetical protein	NA	NA	NA	NA
AYE46704.1\|3572743_3573085_+	DUF2511 domain-containing protein	NA	NA	NA	NA
AYE46705.1\|3573477_3574554_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.2e-97	52.0
AYE46706.1\|3575430_3576587_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46707.1\|3576743_3576971_-	exodeoxyribonuclease VIII	A0A088CD28	Shigella_phage	2.0e-15	66.7
AYE46708.1\|3577311_3578467_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.0e-67	45.1
AYE46709.1\|3578373_3578583_+	hypothetical protein	NA	NA	NA	NA
AYE46710.1\|3578588_3579757_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE46711.1\|3579835_3581542_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
AYE46712.1\|3581752_3582909_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE46713.1\|3584861_3586017_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.0e-67	45.1
3582914:3584179	attR	NA	NA	NA	NA

DBSCAN-SWA_17

3658122 : 3772142

120

Enterobacteria_phage(58.62%)

head,terminase,plate,tRNA,transposase,tail,portal,capsid,integrase

attL 3680796:3680855|attR 3767958:3768725

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE46780.1\|3658122_3658820_-\|transposase	IS1-like element IS1A family transposase	A0A077SLN4	Escherichia_phage	4.0e-131	98.3
AYE46781.1\|3658979_3660020_+	DUF1266 domain-containing protein	NA	NA	NA	NA
AYE46782.1\|3660136_3661480_-	glutamate dehydrogenase	NA	NA	NA	NA
AYE46783.1\|3661715_3661988_+	DUF1496 domain-containing protein	NA	NA	NA	NA
AYE46784.1\|3661953_3662361_-	pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA	NA	NA	NA
AYE46785.1\|3662447_3662723_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
AYE46786.1\|3663472_3663844_+	hypothetical protein	NA	NA	NA	NA
AYE48107.1\|3663852_3663975_-	thiosulfate sulfurtransferase ynjE	NA	NA	NA	NA
AYE46787.1\|3664003_3665276_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE46788.1\|3666562_3667216_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.9e-14	29.7
AYE46789.1\|3668724_3669891_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE46790.1\|3669900_3670449_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AYE46791.1\|3670448_3671156_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
AYE46792.1\|3671170_3671848_-	protein YdjY	NA	NA	NA	NA
AYE46793.1\|3671852_3672563_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
AYE46794.1\|3672729_3673536_-	exodeoxyribonuclease III	NA	NA	NA	NA
AYE46795.1\|3673981_3675202_+	succinylornithine aminotransferase	A0A1V0SKB7	Klosneuvirus	2.5e-27	27.6
AYE46796.1\|3675198_3676233_+	arginine N-succinyltransferase	NA	NA	NA	NA
AYE46797.1\|3677704_3679048_+	N-succinylarginine dihydrolase	NA	NA	NA	NA
AYE46798.1\|3679040_3680009_+	succinylglutamate desuccinylase	NA	NA	NA	NA
AYE46799.1\|3680338_3680800_+	ATP-independent periplasmic protein-refolding chaperone	NA	NA	NA	NA
3680796:3680855	attL	NA	NA	NA	NA
AYE46800.1\|3681803_3682379_+	protein Ves	NA	NA	NA	NA
AYE46801.1\|3682338_3683226_-	nucleotide excision repair endonuclease	NA	NA	NA	NA
AYE46802.1\|3683455_3684283_-	NAD(+) synthetase	G3MA24	Bacillus_virus	5.9e-73	54.6
AYE46803.1\|3684484_3684823_+	osmotically-inducible lipoprotein E	NA	NA	NA	NA
AYE46804.1\|3685121_3685442_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
AYE46805.1\|3685526_3686885_+	PTS N,N'-diacetylchitobiose transporter subunit IIC	NA	NA	NA	NA
AYE46806.1\|3686935_3687286_+	N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component	NA	NA	NA	NA
AYE46807.1\|3687293_3688136_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYE46808.1\|3688240_3689593_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
AYE46809.1\|3689605_3690364_+	chitin disaccharide deacetylase	NA	NA	NA	NA
AYE46810.1\|3690621_3692883_-	catalase HPII	A0A2K9L572	Tupanvirus	1.3e-143	48.5
AYE46811.1\|3693065_3693329_+	cell division activator CedA	NA	NA	NA	NA
AYE46812.1\|3694425_3695817_-	L-cystine transporter	NA	NA	NA	NA
AYE46813.1\|3695949_3696540_-	metal-dependent hydrolase	NA	NA	NA	NA
AYE46814.1\|3696702_3697371_-	2-deoxyglucose-6-phosphate phosphatase	NA	NA	NA	NA
AYE46815.1\|3697517_3698054_+	hypothetical protein	NA	NA	NA	NA
AYE46816.1\|3698094_3698955_-	fructosamine kinase family protein	NA	NA	NA	NA
AYE46817.1\|3699060_3699351_-	endoribonuclease GhoS	NA	NA	NA	NA
AYE46818.1\|3699451_3700381_-	6-phosphofructokinase II	NA	NA	NA	NA
AYE46819.1\|3700667_3701426_+	DUF481 domain-containing protein	NA	NA	NA	NA
AYE46820.1\|3701478_3701586_-	hypothetical protein	NA	NA	NA	NA
AYE46821.1\|3701757_3702519_-	hypothetical protein	NA	NA	NA	NA
AYE46822.1\|3702540_3703656_-	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
AYE46823.1\|3704180_3706109_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	9.4e-130	37.3
AYE46824.1\|3706112_3706655_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
AYE46825.1\|3706751_3706949_+	50S ribosomal protein L35	NA	NA	NA	NA
AYE46826.1\|3707001_3707358_+	50S ribosomal protein L20	NA	NA	NA	NA
AYE48108.1\|3707480_3707525_+\|tRNA	phenylalanyl--tRNA ligase operon leader peptide	NA	NA	NA	NA
AYE46827.1\|3707807_3708791_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.9e-34	38.7
AYE46828.1\|3708805_3711193_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AYE46829.1\|3711197_3711497_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
AYE46830.1\|3711803_3711944_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	4.5e-18	95.7
AYE46831.1\|3712134_3712395_-	hypothetical protein	NA	NA	NA	NA
AYE46832.1\|3712638_3714141_-	DNA-binding protein	NA	NA	NA	NA
AYE46833.1\|3714366_3715476_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	2.8e-203	98.6
AYE46834.1\|3715633_3716818_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.6e-220	97.0
AYE46835.1\|3716817_3717330_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	9.2e-93	99.4
AYE46836.1\|3717384_3717750_+\|tail	phage tail protein	A0A0A7NPZ0	Enterobacteria_phage	3.2e-55	96.7
AYE46837.1\|3717677_3717914_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	8.7e-22	96.1
AYE46838.1\|3717900_3720708_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	91.4
AYE46839.1\|3720714_3721209_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.2e-86	98.8
AYE46840.1\|3721244_3721832_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.0e-103	98.5
AYE46841.1\|3721961_3723117_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
AYE46842.1\|3723203_3724190_+\|tail	phage tail protein	A0A0C4UQV0	Shigella_phage	7.0e-190	98.1
AYE46843.1\|3724191_3724719_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	3.7e-89	93.1
AYE46844.1\|3724921_3726078_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
AYE46845.1\|3726134_3726548_-\|tail	tail fiber assembly protein	A0A0C4UQZ5	Shigella_phage	3.8e-73	100.0
AYE46846.1\|3726550_3728521_-\|tail	phage tail protein	Q1MVL8	Enterobacteria_phage	1.7e-211	60.0
AYE46847.1\|3728523_3729054_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.2e-90	95.7
AYE46848.1\|3729046_3729943_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.3
AYE46849.1\|3729946_3730297_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.9e-57	96.6
AYE46850.1\|3730293_3730875_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	2.2e-98	94.3
AYE46851.1\|3730871_3731507_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	3.4e-113	99.1
AYE46852.1\|3731499_3731967_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	1.7e-85	98.7
AYE46853.1\|3732038_3732512_-	hypothetical protein	A0A0A7NPY2	Enterobacteria_phage	1.3e-13	38.9
AYE48109.1\|3732508_3733054_-	lysozyme	A0A0H4TH14	Yersinia_phage	2.2e-28	42.5
AYE46854.1\|3733037_3733340_-\|tail	phage tail protein	NA	NA	NA	NA
AYE46855.1\|3733333_3733531_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	6.8e-28	93.8
AYE46856.1\|3733530_3734025_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	9.2e-90	99.4
AYE46857.1\|3734126_3734927_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	1.4e-119	85.3
AYE46858.1\|3734972_3736025_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	5.2e-191	96.0
AYE46859.1\|3736048_3736885_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	1.3e-147	98.2
AYE46860.1\|3737039_3738791_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	98.8
AYE46861.1\|3738790_3739837_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.5e-206	100.0
AYE46862.1\|3740328_3740514_-	hypothetical protein	NA	NA	NA	NA
AYE46863.1\|3740528_3740768_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	7.5e-29	82.3
AYE46864.1\|3740764_3741289_-	hypothetical protein	NA	NA	NA	NA
AYE46865.1\|3741349_3741661_-	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	7.2e-40	83.5
AYE46866.1\|3741665_3742625_-	recombinase	A0A0A7NPX4	Enterobacteria_phage	9.9e-181	99.7
AYE48110.1\|3742701_3745386_-	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	98.0
AYE46867.1\|3745530_3745896_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5
AYE46868.1\|3746037_3746283_-	MarR family transcriptional regulator	A0A0A7NV47	Enterobacteria_phage	1.0e-33	86.4
AYE46869.1\|3746279_3746483_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	1.0e-26	88.1
AYE46870.1\|3746679_3746922_-	DUF4754 domain-containing protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
AYE46871.1\|3746933_3747221_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	1.6e-30	74.7
AYE46872.1\|3747231_3747570_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	8.9e-52	86.2
AYE46873.1\|3747584_3747863_-	DNA-binding protein	NA	NA	NA	NA
AYE46874.1\|3747958_3748270_+	XRE family transcriptional regulator	Q1JS21	Enterobacteria_phage	8.3e-20	49.5
AYE46875.1\|3748358_3749297_+\|integrase	integrase	A0A0M4RTQ0	Salmonella_phage	5.1e-81	51.5
AYE46876.1\|3749299_3749800_+	hypothetical protein	NA	NA	NA	NA
AYE46877.1\|3749900_3750338_+	DUF1640 domain-containing protein	NA	NA	NA	NA
AYE46878.1\|3750530_3751511_+	vitamin B12 import system permease BtuC	NA	NA	NA	NA
AYE46879.1\|3751573_3752125_+	glutathione peroxidase	NA	NA	NA	NA
AYE46880.1\|3752124_3752874_+	vitamin B12 import ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	28.2
AYE46881.1\|3752951_3753416_+	lipoprotein	S5MM68	Bacillus_phage	9.5e-12	37.7
AYE46882.1\|3753516_3754548_+\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE46883.1\|3754817_3755531_+	EAL domain-containing protein	NA	NA	NA	NA
AYE46884.1\|3755593_3757030_+	YdiU family protein	NA	NA	NA	NA
AYE46885.1\|3757033_3757225_-	hemin uptake protein HemP	NA	NA	NA	NA
AYE46886.1\|3757356_3758403_-	3-deoxy-7-phosphoheptulonate synthase AroH	S4W5F1	Pandoravirus	2.5e-84	47.7
AYE46887.1\|3758559_3759393_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA
AYE46888.1\|3759504_3759672_+	hypothetical protein	NA	NA	NA	NA
AYE46889.1\|3759725_3762104_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	2.1e-171	36.7
AYE46890.1\|3764640_3764934_-	ferredoxin family protein	NA	NA	NA	NA
AYE46891.1\|3766275_3767214_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AYE46892.1\|3767995_3768775_-	electron transfer flavoprotein	NA	NA	NA	NA
3767958:3768725	attR	NA	NA	NA	NA
AYE46893.1\|3768811_3768988_+	hypothetical protein	NA	NA	NA	NA
AYE46894.1\|3769090_3769291_+	hypothetical protein	A0A2L1IV26	Escherichia_phage	3.9e-07	100.0
AYE46895.1\|3770985_3772142_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1

DBSCAN-SWA_18

3833822 : 3975310

113

Escherichia_phage(24.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE46948.1\|3833822_3835097_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	8.8e-84	41.4
AYE46949.1\|3835155_3836019_+	pyridoxal kinase	NA	NA	NA	NA
AYE46950.1\|3836573_3837902_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE46951.1\|3837969_3838107_-	glutathione S-transferase	NA	NA	NA	NA
AYE46952.1\|3838211_3839714_-	dipeptide and tripeptide permease A	NA	NA	NA	NA
AYE46953.1\|3840324_3840960_-	endonuclease III	NA	NA	NA	NA
AYE46954.1\|3840959_3841655_-	electron transporter RsxE	NA	NA	NA	NA
AYE46955.1\|3841658_3842279_-	electron transport complex subunit G	NA	NA	NA	NA
AYE46956.1\|3842282_3843341_-	electron transport complex subunit D	NA	NA	NA	NA
AYE46957.1\|3843341_3845564_-	electron transporter RsxC	NA	NA	NA	NA
AYE46958.1\|3845556_3846135_-	electron transport complex subunit RsxB	NA	NA	NA	NA
AYE46959.1\|3846134_3846716_-	electron transport complex subunit A	NA	NA	NA	NA
AYE46960.1\|3846792_3847233_-	DUF2569 domain-containing protein	NA	NA	NA	NA
AYE46961.1\|3847318_3847534_-	nucleoid-associated protein	NA	NA	NA	NA
AYE48113.1\|3847798_3847924_-	division septum protein Blr	NA	NA	NA	NA
AYE46962.1\|3848167_3849208_+	oxidoreductase	NA	NA	NA	NA
AYE46963.1\|3849243_3850245_-	adenosine deaminase	NA	NA	NA	NA
AYE46964.1\|3850348_3851521_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AYE46965.1\|3851530_3853123_-	PTS maltose- and glucose EIICB component	NA	NA	NA	NA
AYE46966.1\|3853297_3854326_+	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
AYE46967.1\|3854486_3855815_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE46968.1\|3855967_3857123_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE48114.1\|3857116_3857911_+	7-alpha-hydroxysteroid dehydrogenase	NA	NA	NA	NA
AYE46969.1\|3858131_3858722_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYE46970.1\|3859110_3860922_+	beta-glucuronidase	B9U1V4	Vaccinia_virus	0.0e+00	100.0
AYE46971.1\|3860918_3862292_+	glucuronide transporter	NA	NA	NA	NA
AYE46972.1\|3862330_3863641_+	glucuronide uptake porin UidC	NA	NA	NA	NA
AYE46973.1\|3863821_3865330_-	DUF945 domain-containing protein	NA	NA	NA	NA
AYE46974.1\|3865430_3866606_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
AYE46975.1\|3866804_3868451_+	fumarate hydratase	NA	NA	NA	NA
AYE46976.1\|3868593_3869997_+	class II fumarate hydratase	NA	NA	NA	NA
AYE46977.1\|3869993_3870923_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
AYE46978.1\|3870998_3872300_-	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	5.5e-17	23.9
AYE46979.1\|3872303_3873023_-	DNA-binding response regulator	NA	NA	NA	NA
AYE46980.1\|3873151_3873487_+	GlpM family protein	NA	NA	NA	NA
AYE46981.1\|3873483_3874206_-	dihydrofolate reductase FolM	NA	NA	NA	NA
AYE46982.1\|3874242_3875625_-	amino acid permease	NA	NA	NA	NA
AYE46983.1\|3875810_3876755_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AYE46984.1\|3877278_3878811_+	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha	NA	NA	NA	NA
AYE46985.1\|3878821_3880210_+	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	NA	NA	NA	NA
AYE46986.1\|3880234_3881269_-	AI-2 transporter TqsA	NA	NA	NA	NA
AYE46987.1\|3881403_3881574_+	hypothetical protein	NA	NA	NA	NA
AYE46988.1\|3881680_3882046_+	multidrug transporter subunit MdtJ	NA	NA	NA	NA
AYE46989.1\|3882032_3882362_+	spermidine export protein MdtI	NA	NA	NA	NA
AYE46990.1\|3882400_3883222_-\|protease	serine protease	NA	NA	NA	NA
AYE46991.1\|3883321_3883405_-	hypothetical protein	NA	NA	NA	NA
AYE46992.1\|3883497_3883770_-	acid shock protein	NA	NA	NA	NA
AYE46993.1\|3884575_3885376_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	1.9e-145	99.6
AYE46994.1\|3885372_3886545_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE46995.1\|3887699_3888953_-	MFS transporter	NA	NA	NA	NA
AYE46996.1\|3889059_3889953_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYE46997.1\|3890087_3891308_+	ROK family transcriptional regulator	NA	NA	NA	NA
AYE46998.1\|3891432_3892128_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
AYE46999.1\|3892080_3893373_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
AYE47000.1\|3893531_3894146_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AYE47001.1\|3894188_3895043_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AYE47002.1\|3895044_3895662_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	8.0e-75	59.1
AYE48115.1\|3895672_3898096_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	4.8e-208	48.6
AYE47003.1\|3899115_3900271_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47004.1\|3901323_3901860_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYE47005.1\|3901932_3903894_+\|protease	collagenase-like protease	Q6DW11	Phage_TP	9.2e-24	28.9
AYE47006.1\|3903985_3904216_-	DUF2554 family protein	NA	NA	NA	NA
AYE48116.1\|3904637_3905054_+	antitoxin HicB	F1C593	Cronobacter_phage	6.3e-31	57.8
AYE47007.1\|3905132_3906539_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AYE47008.1\|3906783_3907929_+	extracellular solute-binding protein	NA	NA	NA	NA
AYE47009.1\|3907946_3908960_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.1e-27	37.9
AYE47010.1\|3909850_3910645_+	ABC transporter permease	NA	NA	NA	NA
AYE47011.1\|3910666_3912091_+	aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
AYE47012.1\|3913173_3913269_-	stress response membrane protein YncL	NA	NA	NA	NA
AYE47013.1\|3913265_3913481_-	hypothetical protein	NA	NA	NA	NA
AYE48117.1\|3913463_3913637_+	GhoT/OrtT family toxin	NA	NA	NA	NA
AYE47014.1\|3913722_3913956_+	DUF2526 domain-containing protein	NA	NA	NA	NA
AYE47015.1\|3913956_3914406_-	DMT family transporter	NA	NA	NA	NA
AYE47016.1\|3914402_3914921_-	L-methionine sulfoximine/L-methionine sulfone acetyltransferase	NA	NA	NA	NA
AYE47017.1\|3915101_3916139_+	NADP-dependent oxidoreductase	A0A2L1IV26	Escherichia_phage	2.7e-06	100.0
AYE47018.1\|3917465_3918622_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47019.1\|3919081_3921184_-	TonB-dependent receptor	A0A1B0VCF0	Salmonella_phage	1.1e-134	65.6
AYE47020.1\|3921098_3921278_+	hypothetical protein	NA	NA	NA	NA
AYE47021.1\|3921425_3922487_+	YncE family protein	NA	NA	NA	NA
AYE47022.1\|3922601_3924101_-	L-asparagine permease	NA	NA	NA	NA
AYE47023.1\|3924367_3924985_+	glutathione S-transferase family protein	NA	NA	NA	NA
AYE47024.1\|3925060_3925273_+	hypothetical protein	NA	NA	NA	NA
AYE47025.1\|3926093_3928202_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	8.1e-26	25.4
AYE47026.1\|3929154_3932265_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	3.6e-22	42.5
AYE47027.1\|3934018_3938236_+	RHS element protein	A0A2H4JHK7	uncultured_Caudovirales_phage	4.9e-22	43.1
AYE47028.1\|3938213_3938453_+	hypothetical protein	NA	NA	NA	NA
AYE47029.1\|3940298_3941834_+\|transposase	IS21-like element ISSso4 family transposase	K4I413	Acidithiobacillus_phage	1.7e-102	40.7
AYE47030.1\|3941850_3942606_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	2.4e-44	43.4
AYE47031.1\|3944620_3945757_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AYE47032.1\|3947131_3947359_+	tautomerase PptA	NA	NA	NA	NA
AYE47033.1\|3947362_3947932_-	flavin reductase family protein	NA	NA	NA	NA
AYE47034.1\|3948104_3948950_+	N-hydroxyarylamine O-acetyltransferase	NA	NA	NA	NA
AYE47035.1\|3949045_3949939_-	PhzF family isomerase	NA	NA	NA	NA
AYE47036.1\|3950017_3950698_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
AYE47037.1\|3950694_3951390_-	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
AYE47038.1\|3951389_3952934_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	6.4e-20	39.2
AYE47039.1\|3952930_3956671_-	nitrate reductase subunit alpha	NA	NA	NA	NA
AYE47040.1\|3956752_3958141_-	NarK family nitrate/nitrite MFS transporter	NA	NA	NA	NA
AYE47041.1\|3959263_3960295_-\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE47042.1\|3960378_3960951_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
AYE47043.1\|3961711_3962812_-	porin	Q1MVN1	Enterobacteria_phage	7.0e-138	65.1
AYE47044.1\|3963070_3963952_-	drug/metabolite DMT transporter permease	NA	NA	NA	NA
AYE47045.1\|3964183_3964771_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE47046.1\|3964819_3967231_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
AYE47047.1\|3967243_3968128_+	formate dehydrogenase subunit beta	NA	NA	NA	NA
AYE47048.1\|3968120_3968774_+	formate dehydrogenase nitrate-inducible cytochrome b556(Fdn) subunit	NA	NA	NA	NA
AYE47049.1\|3969001_3969286_-	transcriptional regulator	A0A2L1IV52	Escherichia_phage	1.2e-20	51.1
AYE47050.1\|3970567_3972265_-	NAD-dependent malic enzyme	NA	NA	NA	NA
AYE47051.1\|3972421_3972559_-	stationary-phase-induced ribosome-associated protein	NA	NA	NA	NA
AYE47052.1\|3972660_3972876_-	biofilm-dependent modulation protein	NA	NA	NA	NA
AYE47053.1\|3973220_3973652_+	OsmC family peroxiredoxin	NA	NA	NA	NA
AYE47054.1\|3973707_3974142_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AYE47055.1\|3974153_3975310_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1

DBSCAN-SWA_19

4075039 : 4189157

111

Escherichia_phage(31.58%)

tRNA,holin,lysis,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE47143.1\|4075039_4075396_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	6.3e-56	94.9
AYE47144.1\|4075453_4075876_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.1e-66	93.5
AYE47145.1\|4075891_4076617_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	9.7e-88	70.5
AYE47146.1\|4076638_4077385_-	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	4.0e-113	82.1
AYE47147.1\|4077391_4078456_-	phage replisome organizer	A0A088CD36	Shigella_phage	7.1e-63	65.2
AYE47148.1\|4078527_4078953_-	Rha family transcriptional regulator	NA	NA	NA	NA
AYE47149.1\|4078949_4079213_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYE47150.1\|4079324_4079825_+	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	1.5e-15	34.9
AYE47151.1\|4079844_4080039_+	antitoxin	NA	NA	NA	NA
AYE47152.1\|4080038_4080329_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AYE48123.1\|4080607_4080760_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.7e-07	55.3
AYE48124.1\|4080771_4081137_+	hypothetical protein	NA	NA	NA	NA
AYE47153.1\|4082144_4082333_+	cell division inhibition protein DicB	NA	NA	NA	NA
AYE47154.1\|4082329_4082521_+	DUF1482 family protein	NA	NA	NA	NA
AYE47155.1\|4083716_4084873_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47156.1\|4085220_4086429_-\|transposase	transposase	A0A077SL42	Escherichia_phage	9.5e-205	92.3
AYE47157.1\|4088703_4089297_-	tellurite methyltransferase	NA	NA	NA	NA
AYE47158.1\|4089293_4090286_-	TDT family transporter	NA	NA	NA	NA
AYE47159.1\|4090409_4091390_+	hypothetical protein	NA	NA	NA	NA
AYE47160.1\|4091384_4091921_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
AYE47161.1\|4091983_4092208_-	DUF465 domain-containing protein	NA	NA	NA	NA
AYE47162.1\|4092223_4092427_+	hypothetical protein	NA	NA	NA	NA
AYE47163.1\|4092347_4094003_-	glucan biosynthesis protein D	NA	NA	NA	NA
AYE47164.1\|4094269_4095571_-	VOC family protein	NA	NA	NA	NA
AYE48125.1\|4095787_4096711_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYE47165.1\|4096748_4098389_-	HAMP domain-containing protein	NA	NA	NA	NA
AYE47166.1\|4098787_4098937_+	protein HokB	NA	NA	NA	NA
AYE47167.1\|4099001_4099181_-	hypothetical protein	A0A0R6PKG1	Moraxella_phage	3.0e-06	68.2
AYE47168.1\|4099425_4099956_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	4.1e-19	44.9
AYE47169.1\|4100144_4101017_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AYE47170.1\|4101013_4102170_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47171.1\|4104264_4105421_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47172.1\|4105477_4106158_-	YdcF family protein	NA	NA	NA	NA
AYE47173.1\|4106429_4110332_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
AYE47174.1\|4110532_4111138_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
AYE48127.1\|4111188_4112481_-	hypothetical protein	NA	NA	NA	NA
AYE47175.1\|4112494_4114252_-	alpha/beta fold hydrolase	NA	NA	NA	NA
AYE48126.1\|4114267_4115191_-	hypothetical protein	NA	NA	NA	NA
AYE47176.1\|4116034_4117203_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE47177.1\|4119355_4119568_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYE47178.1\|4119739_4120066_-	DUF1318 domain-containing protein	NA	NA	NA	NA
AYE47179.1\|4120073_4120259_-	YnbE family lipoprotein	NA	NA	NA	NA
AYE47180.1\|4120255_4122895_-	YdbH family protein	NA	NA	NA	NA
AYE47181.1\|4123102_4124092_+	2-hydroxyacid dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
AYE47182.1\|4124202_4124625_+	heat-shock protein HslJ	NA	NA	NA	NA
AYE47183.1\|4124621_4124888_-	DUF333 domain-containing protein	NA	NA	NA	NA
AYE47184.1\|4125161_4128686_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AYE47185.1\|4129051_4130185_+	porin OmpS2	Q1MVN1	Enterobacteria_phage	5.4e-117	58.5
AYE47186.1\|4130325_4130760_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
AYE47187.1\|4131345_4132260_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE47188.1\|4132259_4133087_+	manganese/iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-11	28.5
AYE47189.1\|4133083_4133941_+	metal ABC transporter permease	NA	NA	NA	NA
AYE47190.1\|4133937_4134795_+	metal ABC transporter permease	NA	NA	NA	NA
AYE47191.1\|4134995_4135619_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	3.6e-83	78.6
AYE47192.1\|4136670_4137033_-	hypothetical protein	NA	NA	NA	NA
AYE47193.1\|4137060_4138217_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47194.1\|4138638_4139133_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
AYE47195.1\|4139588_4140745_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47196.1\|4141340_4142513_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE47197.1\|4142692_4142893_-	hypothetical protein	K7PJR7	Enterobacteria_phage	2.5e-30	90.9
AYE47198.1\|4143209_4143362_-	hypothetical protein	K7PKL2	Enterobacteria_phage	3.1e-20	96.0
AYE47199.1\|4143349_4143817_-\|lysis	lysis protein	Q9AZ06	Salmonella_phage	2.3e-74	96.1
AYE47200.1\|4143813_4144311_-	lysozyme	A0A0N7KZA0	Stx2-converting_phage	4.2e-90	97.6
AYE47201.1\|4144310_4144526_-\|holin	holin	M1FN85	Enterobacteria_phage	1.0e-32	95.8
AYE47202.1\|4145097_4146266_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
AYE47203.1\|4147837_4148392_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	6.5e-68	69.1
AYE47204.1\|4148388_4148679_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.5e-47	89.6
AYE47205.1\|4148678_4149278_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.9e-106	91.5
AYE47206.1\|4149349_4149619_-	hypothetical protein	NA	NA	NA	NA
AYE47207.1\|4150473_4150686_-	Hok/Gef family protein	A0A0P0ZAX5	Stx2-converting_phage	6.8e-26	91.4
AYE47208.1\|4151083_4151449_-	DUF551 domain-containing protein	Q08J61	Stx2-converting_phage	2.3e-29	53.0
AYE47209.1\|4151448_4152114_-	hypothetical protein	A0A076G611	Escherichia_phage	4.6e-36	44.9
AYE47210.1\|4152110_4152476_-	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	5.1e-69	100.0
AYE47211.1\|4152477_4152696_-	DUF4014 domain-containing protein	A0A1I9LJM2	Stx_converting_phage	6.8e-29	91.7
AYE47212.1\|4152788_4153112_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.8e-52	98.1
AYE47213.1\|4153959_4155115_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47214.1\|4155112_4155529_-	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	1.4e-46	75.2
AYE47215.1\|4155543_4156290_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	6.2e-122	88.8
AYE47216.1\|4156828_4157985_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47217.1\|4158775_4159198_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.4e-70	96.4
AYE47218.1\|4159194_4159437_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	2.3e-17	62.1
AYE47219.1\|4159533_4159953_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	3.1e-14	60.6
AYE47220.1\|4160258_4160414_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.4e-07	53.2
AYE47221.1\|4160558_4161590_+\|transposase	IS630 family transposase IS630	NA	NA	NA	NA
AYE47222.1\|4161570_4161774_+	hypothetical protein	I6PDF6	Cronobacter_phage	2.2e-05	62.5
AYE47223.1\|4161750_4162041_-	hypothetical protein	NA	NA	NA	NA
AYE48128.1\|4162174_4162393_-	hypothetical protein	NA	NA	NA	NA
AYE47224.1\|4162442_4163288_+	transcriptional regulator	A0A0P0ZE80	Stx2-converting_phage	1.4e-56	58.0
AYE47225.1\|4163298_4163487_+	cell division inhibition protein DicB	NA	NA	NA	NA
AYE47226.1\|4163483_4163675_+	DUF1482 family protein	NA	NA	NA	NA
AYE47227.1\|4163759_4164035_+	hypothetical protein	A0A0U2QW85	Escherichia_phage	4.4e-41	93.4
AYE47228.1\|4164230_4165386_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.0e-67	45.1
AYE47229.1\|4165972_4166908_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
AYE47230.1\|4167036_4168410_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
AYE47231.1\|4168439_4168613_-	hypothetical protein	NA	NA	NA	NA
AYE47232.1\|4168887_4169871_-	zinc transporter ZntB	NA	NA	NA	NA
AYE48129.1\|4170125_4171358_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
AYE47233.1\|4171378_4171942_-	DNA endonuclease SmrA	NA	NA	NA	NA
AYE47234.1\|4172271_4173180_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYE47235.1\|4173355_4174666_+	amidohydrolase	NA	NA	NA	NA
AYE47236.1\|4174665_4176111_+	amidohydrolase	NA	NA	NA	NA
AYE48130.1\|4176023_4176218_+	hypothetical protein	NA	NA	NA	NA
AYE47237.1\|4177309_4178465_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.2e-69	45.4
AYE47238.1\|4178951_4179467_+	methylated-DNA--protein-cysteine methyltransferase	M1PFU9	Streptococcus_phage	2.4e-24	42.8
AYE47239.1\|4179661_4180414_+	transcriptional regulator FNR	NA	NA	NA	NA
AYE47240.1\|4180565_4181516_+	universal stress protein E	NA	NA	NA	NA
AYE47241.1\|4181565_4181823_-	DUF2534 family protein	NA	NA	NA	NA
AYE47242.1\|4183926_4185540_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AYE47243.1\|4185876_4186776_-	transcriptional regulator	NA	NA	NA	NA
AYE47244.1\|4186913_4187834_+	alpha/beta hydrolase	NA	NA	NA	NA
AYE47245.1\|4187883_4189157_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3

DBSCAN-SWA_20

4254293 : 4328767

Escherichia_phage(34.09%)

transposase,holin,tail,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE47303.1\|4254293_4255343_-\|protease	protease	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
AYE47304.1\|4255562_4256321_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	2.6e-06	23.9
AYE47305.1\|4256317_4256908_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AYE47306.1\|4256947_4257820_-	23S rRNA pseudouridylate synthase B	NA	NA	NA	NA
AYE47307.1\|4259174_4259795_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AYE47308.1\|4259791_4260673_-	5'-3' exoribonuclease	NA	NA	NA	NA
AYE48131.1\|4260810_4260855_+	trp operon leader peptide	NA	NA	NA	NA
AYE47309.1\|4260946_4262509_+	anthranilate synthase component I	NA	NA	NA	NA
AYE47310.1\|4262508_4264104_+	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
AYE48132.1\|4264107_4265466_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
AYE47311.1\|4265477_4266671_+	tryptophan synthase subunit beta	NA	NA	NA	NA
AYE47312.1\|4266670_4267477_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
AYE47313.1\|4268652_4268928_+	hypothetical protein	S5MQL6	Escherichia_phage	1.1e-10	52.9
AYE47314.1\|4268924_4269482_+	Rha family transcriptional regulator	Q8H9L9	Vibrio_phage	4.2e-30	63.8
AYE48133.1\|4271038_4271665_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AYE47315.1\|4271609_4271747_-\|capsid	nucleocapsid protein	NA	NA	NA	NA
AYE48134.1\|4271863_4272046_-	recombinase family protein	A0A0C4UR34	Shigella_phage	1.4e-24	95.0
AYE47316.1\|4273037_4273571_+\|tail	tail fiber assembly protein	C9DGR0	Escherichia_phage	3.4e-82	85.9
AYE47317.1\|4273599_4274127_-\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	7.1e-80	84.0
AYE47318.1\|4274128_4276885_-\|tail	phage tail protein	A0A0F7LDR4	Escherichia_phage	1.0e-108	46.5
AYE47319.1\|4277036_4277636_-	Ail/Lom family protein	H6WZM8	Escherichia_phage	1.7e-106	94.4
AYE47320.1\|4280951_4281155_-	host specificity protein J	H6WZM6	Escherichia_phage	3.4e-30	98.5
AYE47321.1\|4281498_4282179_-\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	9.1e-112	99.1
AYE47322.1\|4282076_4282820_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	7.7e-149	98.4
AYE47323.1\|4282830_4283529_-\|tail	phage minor tail protein L	B6DZB1	Enterobacteria_phage	1.7e-129	96.6
AYE47324.1\|4283528_4283858_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
AYE47325.1\|4283854_4286428_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.3
AYE47326.1\|4286408_4286822_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	4.1e-43	83.2
AYE47327.1\|4286848_4287280_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
AYE47328.1\|4287293_4288046_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	2.3e-132	97.6
AYE47329.1\|4288053_4288449_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AYE47330.1\|4288445_4289021_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	6.4e-50	57.8
AYE47331.1\|4289211_4290384_+\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	2.2e-230	100.0
AYE47332.1\|4290994_4292150_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47333.1\|4292584_4292899_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	8.3e-52	99.0
AYE47334.1\|4292903_4293119_-\|holin	holin	G9L6J5	Escherichia_phage	2.6e-33	98.6
AYE47335.1\|4293269_4295123_-	DUF1737 domain-containing protein	Q08JA2	Stx2-converting_phage	0.0e+00	90.0
AYE47336.1\|4296388_4297447_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	2.3e-199	94.6
AYE47337.1\|4297597_4297795_-	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	2.1e-29	100.0
AYE47338.1\|4298019_4298841_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.4e-79	59.7
AYE47339.1\|4298837_4299218_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.5e-34	63.6
AYE47340.1\|4299218_4300277_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.3e-88	47.4
AYE47341.1\|4300278_4300557_-	hypothetical protein	NA	NA	NA	NA
AYE47342.1\|4300623_4300884_-	hypothetical protein	NA	NA	NA	NA
AYE47343.1\|4301104_4301317_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
AYE47344.1\|4301551_4301896_-	hypothetical protein	A0A2R2Z2X8	Escherichia_phage	3.8e-58	99.1
AYE47345.1\|4301892_4302060_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	2.1e-14	89.4
AYE47346.1\|4302070_4302301_-	hypothetical protein	A0A2P0P958	Salmonella_phage	5.0e-22	76.9
AYE47347.1\|4302312_4303469_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47348.1\|4303536_4303923_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	9.5e-58	89.0
AYE47349.1\|4304806_4305019_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	2.9e-32	88.6
AYE47350.1\|4305051_4305270_+	DUF4014 domain-containing protein	A0A1I9LJM2	Stx_converting_phage	5.2e-29	91.7
AYE47351.1\|4305690_4306329_-	outer membrane protein OmpW	NA	NA	NA	NA
AYE47352.1\|4306685_4307429_+	UPF0259 family protein	NA	NA	NA	NA
AYE47353.1\|4307458_4307998_+	intracellular septation protein A	NA	NA	NA	NA
AYE47354.1\|4308102_4308501_+	acyl-CoA thioesterase	NA	NA	NA	NA
AYE48135.1\|4308540_4309260_-	TonB system transport protein TonB	NA	NA	NA	NA
AYE47355.1\|4309350_4310871_+	recombinase family protein	NA	NA	NA	NA
AYE47356.1\|4310903_4311674_-	hypothetical protein	A0A291AY96	Shigella_phage	2.2e-82	63.6
AYE47357.1\|4312293_4313450_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1
AYE47358.1\|4313758_4315012_+	voltage-gated potassium channel protein	NA	NA	NA	NA
AYE47359.1\|4315066_4315351_-	hypothetical protein	NA	NA	NA	NA
AYE47360.1\|4315382_4316843_+	cardiolipin synthase A	NA	NA	NA	NA
AYE47361.1\|4316877_4317207_+	DUF440 family protein	NA	NA	NA	NA
AYE47362.1\|4317259_4318264_-	oligopeptide ABC transporter ATP-binding protein OppF	G9BWD6	Planktothrix_phage	1.1e-23	35.6
AYE47363.1\|4318260_4319274_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-14	31.7
AYE47364.1\|4319285_4320194_-	peptide ABC transporter permease	NA	NA	NA	NA
AYE47365.1\|4320208_4321129_-	oligopeptide ABC transporter permease OppB	NA	NA	NA	NA
AYE48136.1\|4321214_4322846_-	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA
AYE47366.1\|4323129_4323426_+	hypothetical protein	NA	NA	NA	NA
AYE47367.1\|4323583_4324231_-	NAAT family transporter YchE	NA	NA	NA	NA
AYE47368.1\|4324708_4327384_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
AYE47369.1\|4327438_4328767_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

4555698 : 4563140

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE47564.1\|4555698_4556835_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	8.5e-163	97.7
AYE47565.1\|4556831_4558832_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.4
AYE47566.1\|4558956_4559418_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AYE47567.1\|4559458_4559929_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AYE47568.1\|4559975_4560695_-	DNA-binding response regulator	NA	NA	NA	NA
AYE48145.1\|4560691_4562377_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	9.5e-304	99.5
AYE47569.1\|4562891_4563140_+	DNA damage-inducible protein DinI	Q687E4	Enterobacteria_phage	9.1e-38	97.6

DBSCAN-SWA_22

4777283 : 4886917

101

Enterobacteria_phage(53.85%)

head,terminase,tRNA,transposase,holin,tail,portal,capsid,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE47744.1\|4777283_4778174_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	9.8e-66	43.9
AYE47745.1\|4778370_4779144_-	histidine transport ATP-binding protein HisP	G9BWD6	Planktothrix_phage	2.4e-23	38.1
AYE47746.1\|4779151_4779868_-	histidine ABC transporter permease	NA	NA	NA	NA
AYE47747.1\|4779864_4780551_-	histidine ABC transporter permease	NA	NA	NA	NA
AYE47748.1\|4780640_4781423_-	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA
AYE47749.1\|4781643_4782426_-	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA
AYE47750.1\|4782691_4783261_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein	NA	NA	NA	NA
AYE47751.1\|4783355_4784873_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.9e-87	44.0
AYE47752.1\|4784909_4785398_-	colicin V production protein	NA	NA	NA	NA
AYE47753.1\|4785656_4786319_-	protein DedD	NA	NA	NA	NA
AYE47754.1\|4786308_4787577_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AYE47755.1\|4787646_4788561_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
AYE47756.1\|4788716_4789376_-	DedA family protein	NA	NA	NA	NA
AYE47757.1\|4789458_4790271_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AYE47758.1\|4790270_4791284_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AYE47759.1\|4791349_4792486_-	erythronate-4-phosphate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	5.9e-23	29.1
AYE47760.1\|4792584_4793580_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
AYE47761.1\|4793576_4794755_-	MFS transporter	NA	NA	NA	NA
AYE47762.1\|4794696_4794918_+	hypothetical protein	NA	NA	NA	NA
AYE47763.1\|4795029_4796250_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
AYE47764.1\|4796408_4798415_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AYE47765.1\|4798535_4798814_-	YfcL family protein	NA	NA	NA	NA
AYE47766.1\|4798847_4799396_-	elongation factor P hydroxylase	NA	NA	NA	NA
AYE47767.1\|4799395_4800205_-	hypothetical protein	NA	NA	NA	NA
AYE47768.1\|4800204_4801029_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AYE47769.1\|4801032_4802118_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
AYE47770.1\|4802152_4803085_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AYE47771.1\|4803250_4803802_+	endonuclease SmrB	NA	NA	NA	NA
AYE47772.1\|4803923_4804781_-	DUF2544 domain-containing protein	NA	NA	NA	NA
AYE47773.1\|4804782_4805307_-	fimbrial protein	NA	NA	NA	NA
AYE47774.1\|4805303_4805774_-	fimbrial protein	NA	NA	NA	NA
AYE47775.1\|4805770_4806385_-	fimbrial protein	NA	NA	NA	NA
AYE47776.1\|4807064_4809707_-	outer membrane usher protein	NA	NA	NA	NA
AYE47777.1\|4809788_4810352_-	type 1 fimbrial protein	NA	NA	NA	NA
AYE47778.1\|4811035_4811521_-	phosphohistidine phosphatase	NA	NA	NA	NA
AYE47779.1\|4811723_4813868_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AYE47780.1\|4813867_4815178_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AYE47781.1\|4815357_4815642_-	DUF406 family protein	NA	NA	NA	NA
AYE47782.1\|4816013_4817354_+	long-chain fatty acid transporter	NA	NA	NA	NA
AYE47783.1\|4821205_4821961_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AYE47784.1\|4821986_4822157_-	hypothetical protein	NA	NA	NA	NA
AYE47785.1\|4822254_4823187_+	transporter	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
AYE47786.1\|4823498_4824656_+	DUF4102 domain-containing protein	A5VW56	Enterobacteria_phage	1.4e-221	99.5
AYE47787.1\|4827634_4828216_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	8.0e-101	93.2
AYE47788.1\|4828215_4831299_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	7.3e-68	82.1
AYE47789.1\|4831950_4835448_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.6
AYE47790.1\|4835508_4836180_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	6.4e-102	97.3
AYE47791.1\|4836077_4836821_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	7.5e-152	99.2
AYE47792.1\|4836826_4837525_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.1e-132	98.3
AYE47793.1\|4837524_4837854_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	3.1e-57	97.2
AYE47794.1\|4837850_4840412_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	89.5
AYE47795.1\|4840404_4840839_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	2.0e-64	99.2
AYE47796.1\|4840820_4841243_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.1e-70	96.4
AYE48151.1\|4841258_4841999_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.0e-129	97.6
AYE47797.1\|4842006_4842402_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
AYE47798.1\|4842398_4842977_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.0e-80	89.6
AYE47799.1\|4842988_4843342_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	4.4e-62	99.1
AYE48152.1\|4843353_4843752_-	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	1.2e-50	83.3
AYE47800.1\|4843793_4844819_-\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	4.3e-190	98.8
AYE47801.1\|4844874_4845207_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
AYE47802.1\|4845216_4846536_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.9e-231	97.9
AYE47803.1\|4846516_4848118_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.2e-310	99.2
AYE47804.1\|4848114_4848321_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AYE47805.1\|4848317_4850243_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
AYE47806.1\|4850217_4850763_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
AYE47807.1\|4851151_4851385_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	9.5e-21	96.3
AYE47808.1\|4851442_4851853_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
AYE47809.1\|4852032_4853306_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
AYE48153.1\|4853585_4853774_+	hypothetical protein	NA	NA	NA	NA
AYE47810.1\|4853777_4854035_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	1.5e-38	98.8
AYE47811.1\|4854031_4854529_-	DNA-binding protein	A0A220NRM9	Escherichia_phage	1.1e-93	100.0
AYE47812.1\|4854730_4855189_-\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	1.2e-56	80.9
AYE47813.1\|4855185_4855683_-	lysozyme	M1FJA0	Enterobacteria_phage	2.1e-86	94.5
AYE47814.1\|4855682_4855898_-\|holin	holin	A5LH82	Enterobacteria_phage	2.6e-33	100.0
AYE47815.1\|4857246_4858329_+	porin OmpD	Q1MVN1	Enterobacteria_phage	8.9e-154	76.3
AYE47816.1\|4858517_4858901_-	antitermination protein	A0A088CD47	Shigella_phage	8.3e-54	82.5
AYE47817.1\|4858986_4859127_-	YlcG family protein	K7PHH3	Enterobacteria_phage	5.5e-08	67.4
AYE47818.1\|4859123_4859486_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	96.5
AYE47819.1\|4859482_4859773_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	3.0e-48	95.8
AYE47820.1\|4859765_4859936_-	hypothetical protein	K7P7K0	Enterobacteria_phage	1.5e-12	67.9
AYE47821.1\|4859935_4860391_-	hypothetical protein	I6PD71	Cronobacter_phage	2.7e-59	66.2
AYE47822.1\|4860655_4861033_+	hypothetical protein	NA	NA	NA	NA
AYE47823.1\|4861029_4861458_+	hypothetical protein	NA	NA	NA	NA
AYE47824.1\|4861897_4863070_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.1e-229	99.7
AYE47825.1\|4863066_4863867_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	6.6e-146	100.0
AYE47826.1\|4866376_4866577_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AYE47827.1\|4866699_4867044_-	hypothetical protein	K7PJY7	Enterobacterial_phage	1.0e-58	98.2
AYE47828.1\|4867236_4867467_+	hypothetical protein	NA	NA	NA	NA
AYE47829.1\|4867357_4867888_+	hypothetical protein	NA	NA	NA	NA
AYE48154.1\|4868799_4869147_-	fructokinase	NA	NA	NA	NA
AYE47830.1\|4869103_4870272_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	5.8e-183	99.7
AYE47831.1\|4870998_4872327_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
AYE47832.1\|4872571_4874005_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	5.3e-29	25.4
AYE48155.1\|4874012_4875008_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYE47833.1\|4875474_4876803_+	D-serine dehydratase	NA	NA	NA	NA
AYE47834.1\|4876910_4878449_-	multidrug efflux MFS transporter subunit EmrY	NA	NA	NA	NA
AYE47835.1\|4878448_4879612_-	multidrug efflux MFS transporter subunit EmrK	NA	NA	NA	NA
AYE47836.1\|4880027_4880642_+	DNA-binding transcriptional activator EvgA	NA	NA	NA	NA
AYE47837.1\|4880646_4884240_+	two-component system sensor histidine kinase EvgS	A0A1V0SGX0	Hokovirus	6.0e-37	32.1
AYE47838.1\|4884295_4885441_-	CoA:oxalate CoA-transferase	NA	NA	NA	NA
AYE47839.1\|4885761_4886917_+\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-67	45.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032524

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032523

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection