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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018519 Sphingobium sp. YG1 DNA, chromosome 2, complete genome 0 crisprs csa3,WYL,DEDDh 0 0 4 0
AP018520 Sphingobium sp. YG1 plasmid pYGP1 DNA, complete genome 0 crisprs csa3 0 0 0 0
AP018521 Sphingobium sp. YG1 plasmid pYGP2 DNA, complete genome 0 crisprs NA 0 0 0 0
AP018518 Sphingobium sp. YG1 DNA, chromosome 1, complete genome 2 crisprs WYL,csa3,DEDDh,cas3,RT,DinG,cas2,cas1,cas9 0 11 3 0

Results visualization

1. AP018519
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 257485 : 415088 112 Stx2-converting_phage(21.21%) protease,transposase NA
DBSCAN-SWA_2 799942 : 807880 10 uncultured_Caudovirales_phage(71.43%) NA NA
DBSCAN-SWA_3 857917 : 864410 8 Leptospira_phage(33.33%) transposase NA
DBSCAN-SWA_4 1741121 : 1793437 49 Stx2-converting_phage(47.06%) transposase,tRNA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. AP018518
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018518_1 2645568-2645665 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018518_2 3247053-3247947 orTypeII NA
13 spacers
cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_LR026982 Rhodoplanes piscinae isolate Rhod_plasmid plasmid 1, complete sequence 17514-17543 4 0.867
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MT152150 Pseudomonas phage 8P, complete genome 12679-12708 5 0.833
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP022416 Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence 168391-168420 5 0.833
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP023068 Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence 318732-318761 5 0.833
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP029358 Azospirillum sp. CFH 70021 plasmid unnamed3 292586-292615 5 0.833
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 326416-326445 5 0.833
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP032685 Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence 569186-569215 5 0.833
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP032690 Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence 567893-567922 5 0.833
AP018518_2 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247551-3247580 30 NC_041958 Roseobacter phage RDJL Phi 2, complete genome 39839-39868 5 0.833
AP018518_2 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247683-3247712 30 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 96242-96271 5 0.833
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP015097 Pelagibaca abyssi strain JLT2014 plasmid pPABY7, complete sequence 12570-12599 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP040096 Pantoea sp. SO10 plasmid unnamed1, complete sequence 545199-545228 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511042 Pseudomonas phage CF126, partial genome 2944-2973 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511051 Pseudomonas phage BR181, partial genome 48512-48541 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511041 Pseudomonas phage CF69, partial genome 2972-3001 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MT118301 Pseudomonas phage Epa33, complete genome 12714-12743 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511049 Pseudomonas phage BR326, partial genome 48512-48541 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511045 Pseudomonas phage BR208, partial genome 48512-48541 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511044 Pseudomonas phage BR197, partial genome 2972-3001 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511050 Pseudomonas phage BR150, partial genome 2900-2929 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511048 Pseudomonas phage BR320, partial genome 2900-2929 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511046 Pseudomonas phage BR313, partial genome 48512-48541 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 KM389216 UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence 52714-52743 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511047 Pseudomonas phage BR319, partial genome 3076-3105 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511043 Pseudomonas phage BR228, partial genome 60666-60695 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 KM389247 UNVERIFIED: Pseudomonas phage JBD90 clone contig00001 genomic sequence 35192-35221 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MK511039 Pseudomonas phage CF24, partial genome 2972-3001 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 LT603684 Pseudomonas phage phiC725A genome assembly 13053-13082 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 1233866-1233895 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NC_011961 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence 557790-557819 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 526457-526486 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1795332-1795361 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP023549 Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence 34407-34436 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 1006632-1006661 6 0.8
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP029232 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence 1060861-1060890 6 0.8
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NC_009427 Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence 259009-259038 6 0.8
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP045122 Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence 41212-41241 6 0.8
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP035709 Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence 42993-43022 6 0.8
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP034185 Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence 283748-283777 6 0.8
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP006370 Aureimonas sp. AU20 plasmid pAU20c, complete sequence 283086-283115 6 0.8
AP018518_2 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247551-3247580 30 NZ_CP020372 Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence 230883-230912 6 0.8
AP018518_2 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247551-3247580 30 MN856038 Siphoviridae sp. isolate 311, complete genome 2680-2709 6 0.8
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 34303-34332 6 0.8
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 CP058906 Micromonospora phage pMLP1, complete sequence 41092-41121 6 0.8
AP018518_2 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247683-3247712 30 NZ_CP032625 Gryllotalpicola sp. 2DFW10M-5 plasmid unnamed1, complete sequence 29552-29581 6 0.8
AP018518_2 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247749-3247778 30 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 308596-308625 6 0.8
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NC_007950 Polaromonas sp. JS666 plasmid 2, complete sequence 317428-317457 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP026091 Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence 683526-683555 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP026093 Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence 683565-683594 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 339260-339289 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 683376-683405 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 683354-683383 7 0.767
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 MK291441 Paracoccus phage vB_PbeS_Pben1, complete genome 14924-14953 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 741555-741584 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 2902-2931 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP024310 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence 1144411-1144440 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP023064 Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence 963241-963270 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 MN694293 Marine virus AFVG_250M335, complete genome 2677-2706 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NC_042342 Pseudomonas virus H66, complete genome 13551-13580 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP044974 Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence 30273-30302 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP044551 Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence 44993-45022 7 0.767
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 1287248-1287277 7 0.767
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 273779-273808 7 0.767
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 162238-162267 7 0.767
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 889344-889373 7 0.767
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP016560 Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence 546234-546263 7 0.767
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 373047-373076 7 0.767
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 266846-266875 7 0.767
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 57237-57266 7 0.767
AP018518_2 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247485-3247514 30 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 254523-254552 7 0.767
AP018518_2 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247485-3247514 30 NC_015162 Deinococcus proteolyticus MRP plasmid pDEIPR02, complete sequence 41895-41924 7 0.767
AP018518_2 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247485-3247514 30 NC_022754 Salmonella phage SETP7, complete genome 41587-41616 7 0.767
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NZ_CP013265 Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence 220188-220217 7 0.767
AP018518_2 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247683-3247712 30 NZ_CP015091 Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence 25983-26012 7 0.767
AP018518_2 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247749-3247778 30 NZ_CP030779 Escherichia albertii strain 05-3106 plasmid unnamed1, complete sequence 28492-28521 7 0.767
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NZ_CP050083 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence 4604-4633 8 0.733
AP018518_2 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247221-3247250 30 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 1224493-1224522 8 0.733
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP030828 Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence 747715-747744 8 0.733
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1777818-1777847 8 0.733
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NC_023564 Mycobacterium phage EagleEye, complete genome 46203-46232 8 0.733
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NC_014839 Pantoea sp. At-9b plasmid pPAT9B02, complete sequence 144093-144122 8 0.733
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP024426 Paracoccus yeei strain TT13 plasmid pTT13-4, complete sequence 137932-137961 8 0.733
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP020445 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete sequence 77706-77735 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 970891-970920 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 1013347-1013376 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 1538-1567 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 1243799-1243828 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 331491-331520 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 253592-253621 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 1565747-1565776 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 155019-155048 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 57194-57223 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 57463-57492 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 124731-124760 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 1304838-1304867 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 1423878-1423907 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 57194-57223 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 1538-1567 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 1538-1567 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 1538-1567 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 267642-267671 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 790331-790360 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 1538-1567 8 0.733
AP018518_2 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247419-3247448 30 MF614628 Sinorhizobium phage phi3LM21, complete genome 3757-3786 8 0.733
AP018518_2 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247485-3247514 30 NZ_CP030764 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence 29404-29433 8 0.733
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NZ_CP048636 Rhizobium oryzihabitans strain M15 plasmid p4, complete sequence 28175-28204 8 0.733
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NZ_CP029833 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence 468477-468506 8 0.733
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NZ_LR594664 Variovorax sp. RA8 plasmid 3 69611-69640 8 0.733
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 MN586021 Arthrobacter phage Beagle, complete genome 11121-11150 8 0.733
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 MT889394 Arthrobacter phage Odyssey395, complete genome 11316-11345 8 0.733
AP018518_2 2.13|3247882|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247882-3247911 30 MT857002 Salmonella phage pSal-SNUABM-02, complete genome 68088-68117 8 0.733
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP022369 Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence 148130-148159 9 0.7
AP018518_2 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247089-3247118 30 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 2101356-2101385 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP050095 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence 32886-32915 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP050083 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence 96696-96725 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP050100 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence 32925-32954 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP036407 Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence 42477-42506 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP025017 Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence 42011-42040 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NC_012854 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence 257117-257146 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP053443 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence 32932-32961 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP025506 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence 400074-400103 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NC_009939 Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence 201535-201564 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP048284 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence 41848-41877 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 71683-71712 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP054026 Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence 60297-60326 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP022668 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence 288181-288210 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP022568 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence 15523-15552 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP053207 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence 118609-118638 9 0.7
AP018518_2 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247287-3247316 30 NZ_CP050088 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence 544303-544332 9 0.7
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_LR134459 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence 63274-63303 9 0.7
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 1976-2005 9 0.7
AP018518_2 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247485-3247514 30 NZ_CP021803 Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence 57887-57916 9 0.7
AP018518_2 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247749-3247778 30 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 259047-259076 9 0.7
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_KM085450 Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence 29488-29517 10 0.667
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_KT754167 Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence 86353-86382 10 0.667
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP009107 Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence 29488-29517 10 0.667
AP018518_2 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247353-3247382 30 NZ_CP026778 Shigella dysenteriae strain 69-3818 plasmid unnamed1 21821-21850 10 0.667
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 378871-378900 10 0.667
AP018518_2 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT 3247617-3247646 30 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 410941-410970 10 0.667

1. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR026982 (Rhodoplanes piscinae isolate Rhod_plasmid plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.867 

tgcggcgcgtcggtgtgctgcac-cagctgg	CRISPR spacer
tgcggcgcgtcggtgtgcagcacgccgccg-	Protospacer
****************** **** * **.*

2. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MT152150 (Pseudomonas phage 8P, complete genome) position: , mismatch: 5, identity: 0.833 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ccttggcgagccgctggcgcgccgcgtgga	Protospacer
 ********************* *.* * *

3. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 5, identity: 0.833 

gcttggcgagccgctggcgcgcgg--tgagca	CRISPR spacer
tcttgccgggccgctggcgcgcgggctgag--	Protospacer
 **** **.***************  ****

4. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 5, identity: 0.833 

gcttggcgagccgctggcgcg--cggtgagca	CRISPR spacer
gcttgacgagccgctggcgcgaccgatgat--	Protospacer
*****.***************  **.***

5. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 5, identity: 0.833 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
catcaggatcgcgtcgaaggcgcgctcgaa	Protospacer
..***** * ****************** *

6. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.833 

--tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
gtggtc--gctggcatcgaaggcgcgctcgcc	Protospacer
   ***  ******.****************

7. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 5, identity: 0.833 

--caagtgctgatccggcggatagcggccgat	CRISPR spacer
atcgactg--gatcctgcggatagcggccgat	Protospacer
  *.* **  ***** ****************

8. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 5, identity: 0.833 

--caagtgctgatccggcggatagcggccgat	CRISPR spacer
atcgactg--gatcctgcggatagcggccgat	Protospacer
  *.* **  ***** ****************

9. spacer 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_041958 (Roseobacter phage RDJL Phi 2, complete genome) position: , mismatch: 5, identity: 0.833 

ctctacagctacgagactgacccgctgacc	CRISPR spacer
tattacagctacaagacggacccgctgacc	Protospacer
. .*********.**** ************

10. spacer 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 5, identity: 0.833 

ccatcacctcgtcatagctggcggccgacc	CRISPR spacer
ccggcgcctcgacatagctggcggccgtcc	Protospacer
**. *.***** *************** **

11. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015097 (Pelagibaca abyssi strain JLT2014 plasmid pPABY7, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ggccgccgagccgctggcgcgcggtcagga	Protospacer
* ..* ******************* ** *

12. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ggtgcgtgaaccgctggcgcgcggtgagct	Protospacer
* *  *.**.*******************

13. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511042 (Pseudomonas phage CF126, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

14. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511051 (Pseudomonas phage BR181, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

15. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511041 (Pseudomonas phage CF69, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

16. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MT118301 (Pseudomonas phage Epa33, complete genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

17. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511049 (Pseudomonas phage BR326, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

18. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511045 (Pseudomonas phage BR208, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

19. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511044 (Pseudomonas phage BR197, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

20. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511050 (Pseudomonas phage BR150, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

21. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511048 (Pseudomonas phage BR320, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

22. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511046 (Pseudomonas phage BR313, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

23. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to KM389216 (UNVERIFIED: Pseudomonas phage F_ET605sp/Pa1651 clone contig00001 genomic sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

24. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511047 (Pseudomonas phage BR319, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

25. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511043 (Pseudomonas phage BR228, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

26. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to KM389247 (UNVERIFIED: Pseudomonas phage JBD90 clone contig00001 genomic sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

27. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK511039 (Pseudomonas phage CF24, partial genome) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

28. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to LT603684 (Pseudomonas phage phiC725A genome assembly) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcggcaa	Protospacer
***.*******.************.*.  *

29. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gcgaggcgagccgctggcgcgtggtcaccg	Protospacer
**  *****************.*** * *.

30. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gcaggccgagcggcgggcgcgcggtgagct	Protospacer
**  * ***** ** **************

31. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcgtcgtgct	Protospacer
***.*******.*********** .* **

32. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gcgacgcgagccggtggcgcgcggcgagga	Protospacer
**   ******** **********.*** *

33. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcgg---tgagca	CRISPR spacer
gcatgtcgagccgctggcgcgcgagcttga---	Protospacer
** ** *****************.   ***

34. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gcgaggcgagccgctggcgcctggtgaccg	Protospacer
**  **************** .***** *.

35. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 6, identity: 0.8 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gcgaggcgagccgctggcgcctggtgaccg	Protospacer
**  **************** .***** *.

36. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 6, identity: 0.8 

tgtcag--gctggcgtcgaaggcgcgctcgca	CRISPR spacer
--acagccgctggcgtcgaaaacgcgctcgcc	Protospacer
   ***  ************..*********

37. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

tgtcag-gctggcgtcgaaggcgcgctcgca	CRISPR spacer
-gccggagccggcgtcgaaggcgcgcccgcg	Protospacer
 *.*.* **.****************.***.

38. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035709 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt12, complete sequence) position: , mismatch: 6, identity: 0.8 

tgtcagg--ctggcgtcgaaggcgcgctcgca	CRISPR spacer
--ccagatcctggagttgaaggcgcgctcgca	Protospacer
  .***.  **** **.***************

39. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034185 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
agcaccgactggcccccgcctgcgccgccg	Protospacer
 ** ..***.********.***********

40. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 6, identity: 0.8 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tcggcgctgatccggcgcatcgcggccgat	Protospacer
. .*.************ ** *********

41. spacer 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 6, identity: 0.8 

ctctacagctacgagactgac-----ccgctgacc	CRISPR spacer
ctctacagctacgcgactgacagtcaccgc-----	Protospacer
************* *******     ****

42. spacer 2.8|3247551|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MN856038 (Siphoviridae sp. isolate 311, complete genome) position: , mismatch: 6, identity: 0.8 

ctctacagctacgagactgacccgctgacc	CRISPR spacer
ctctacagctacaagactgacagtcgcacc	Protospacer
************.********   *  ***

43. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 6, identity: 0.8 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
tcggtcatggccttcatgcggctgccacgc	Protospacer
* ******** *********** *** *

44. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to CP058906 (Micromonospora phage pMLP1, complete sequence) position: , mismatch: 6, identity: 0.8 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
ttcatcagcggcttcatgcggcggcctcga	Protospacer
*  .***  ******************* *

45. spacer 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032625 (Gryllotalpicola sp. 2DFW10M-5 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

ccatcacctcgtcatagctggcggccgacc	CRISPR spacer
cgatcacctcgtcatagctggcgagctgct	Protospacer
* *********************. * .*.

46. spacer 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8 

ggtcct--tccggcactcagcagctgcgtcgc	CRISPR spacer
--tcataaaccggcactcagcagcggcgtagc	Protospacer
  ** *   *************** **** **

47. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
gccggcgcgtcggtgggctgcaccggccca	Protospacer
  ************* ********.**. .

48. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgcgcgcgacggtgtgctgcacctgcgcg	Protospacer
*   ***** ************** **  *

49. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgcgcgcgacggtgtgctgcacctgcgcg	Protospacer
*   ***** ************** **  *

50. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgcgcgcgacggtgtgctgcacctgcgcg	Protospacer
*   ***** ************** **  *

51. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgcgcgcgacggtgtgctgcacctgcgcg	Protospacer
*   ***** ************** **  *

52. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgcgcgcgacggtgtgctgcacctgcgcg	Protospacer
*   ***** ************** **  *

53. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MK291441 (Paracoccus phage vB_PbeS_Pben1, complete genome) position: , mismatch: 7, identity: 0.767 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tcgatcacgtcggtgagcggcaccagctgg	Protospacer
*  . *.******** ** ***********

54. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ccggcccgagccgctcgcgcgcggcgagca	Protospacer
 *    ********* ********.*****

55. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
agttggcgagccgccggcgcacggtgtccg	Protospacer
. ************.*****.*****  *.

56. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
acgtggcgagccgctggcgcgtggtcactt	Protospacer
.* ******************.*** * .

57. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
acgtggcgagccgctggcgcgtggtcactt	Protospacer
.* ******************.*** * .

58. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MN694293 (Marine virus AFVG_250M335, complete genome) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
cccgggcgagccgctggcgcacgttgagac	Protospacer
 *. ****************.** ****

59. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_042342 (Pseudomonas virus H66, complete genome) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
gctcggcgagctgctggcgcgcggcagcaa	Protospacer
***.*******.************...  *

60. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044974 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ggctcgcgaggcgctggcgcgcggtgcggc	Protospacer
* .* ***** *************** *

61. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044551 (Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence) position: , mismatch: 7, identity: 0.767 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
ggctcgcgaggcgctggcgcgcggtgcggc	Protospacer
* .* ***** *************** *

62. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.767 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ggcagggcggtcgtcgaaggcgcgctcgcg	Protospacer
 *. .*** * ******************.

63. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 7, identity: 0.767 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
cgaggggctggcgacgaaggcgcgatcgct	Protospacer
.*  .******** ********** ****

64. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.767 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ggcagggcggtcgtcgaaggcgcgctcgcg	Protospacer
 *. .*** * ******************.

65. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.767 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ggcagggcggtcgtcgaaggcgcgctcgcg	Protospacer
 *. .*** * ******************.

66. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 7, identity: 0.767 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ggcagggcggtcgtcgaaggcgcgctcgcg	Protospacer
 *. .*** * ******************.

67. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.767 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
agcctcctgatccggcgggtagccgccgat	Protospacer
 .  * ************.**** ******

68. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
cgcggccgcatccggcggagagcggccgat	Protospacer
*. *  *  ********** **********

69. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.767 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
cgcggccgcatccggcggagagcggccgat	Protospacer
*. *  *  ********** **********

70. spacer 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767 

caagcattggaggcgcaggcatgagcgagg	CRISPR spacer
tctgcgttggagccgcaggcatgagcggcg	Protospacer
.  **.****** **************. *

71. spacer 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_015162 (Deinococcus proteolyticus MRP plasmid pDEIPR02, complete sequence) position: , mismatch: 7, identity: 0.767 

caagcattggaggcgcaggcatgagcgagg	CRISPR spacer
ctggacatggaggtgcaggcatgagcgagc	Protospacer
* .*   ******.***************

72. spacer 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_022754 (Salmonella phage SETP7, complete genome) position: , mismatch: 7, identity: 0.767 

caagcattggaggcgcaggcatgagcgagg	CRISPR spacer
ctcggatgggaggcgcaggaatgagcgaca	Protospacer
*  * ** *********** ******** .

73. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013265 (Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence) position: , mismatch: 7, identity: 0.767 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
cgggtcaggggcttcatgcggccgacaacg	Protospacer
.****** ************** * *  *.

74. spacer 2.10|3247683|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015091 (Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence) position: , mismatch: 7, identity: 0.767 

ccatcacctcgtcatagctggcggccgacc	CRISPR spacer
ccatcacctcgtcatagatcgcgtcatgca	Protospacer
***************** * *** *  .*

75. spacer 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030779 (Escherichia albertii strain 05-3106 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767 

ggtccttccggcactcagcagctgcgtcgc	CRISPR spacer
cttccttccagcattcagcagctgcggtgt	Protospacer
  *******.***.************ .*.

76. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 8, identity: 0.733 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
agttggcgagccgccggcgcacggtatccg	Protospacer
. ************.*****.****.  *.

77. spacer 2.3|3247221|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.733 

gcttggcgagccgctggcgcgcggtgagca	CRISPR spacer
cgtctgcgagctgctggcgcgcggtggcga	Protospacer
  *. ******.**************.  *

78. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 8, identity: 0.733 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
gatcaggctggcgacgaaggcgccgacgac	Protospacer
 .*********** *********   **

79. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
gctggtgctggcgccgcaggcgcgctcgct	Protospacer
  * . *******.** ************

80. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_023564 (Mycobacterium phage EagleEye, complete genome) position: , mismatch: 8, identity: 0.733 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
tatcaggctcgcgtcgaaggcgcatagtga	Protospacer
*.******* *************..    *

81. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 8, identity: 0.733 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
caacaagaccggcccccgtctgctcagcca	Protospacer
*. .  ***************** * ***.

82. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024426 (Paracoccus yeei strain TT13 plasmid pTT13-4, complete sequence) position: , mismatch: 8, identity: 0.733 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
agtcgataccggcccccgccagcgccgccg	Protospacer
 *..   ***********.* *********

83. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020445 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
agtcgataccggcccccgccagcgccgccg	Protospacer
 *..   ***********.* *********

84. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

85. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

86. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

87. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

88. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

89. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

90. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

91. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

92. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

93. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

94. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

95. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

96. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

97. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

98. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

99. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

100. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggaaagcggccgat	Protospacer
.. *  *  ********** **********

101. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

102. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggaaagcggccgat	Protospacer
.. *  *  ********** **********

103. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tgcggccgcatccggcggagagcggccgat	Protospacer
.. *  *  ********** **********

104. spacer 2.6|3247419|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MF614628 (Sinorhizobium phage phi3LM21, complete genome) position: , mismatch: 8, identity: 0.733 

caagtgctgatccggcggatagcggccgat	CRISPR spacer
tcggcgctgatccagcggatagcggcgggg	Protospacer
. .*.********.************ *.

105. spacer 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733 

caagcattggaggcgcaggcatgagcgagg	CRISPR spacer
caagcattggaagcgctggcatggaaccga	Protospacer
***********.**** ******..   *.

106. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048636 (Rhizobium oryzihabitans strain M15 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.733 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
ctgatcatcggcttcaggcggcggcctatg	Protospacer
. *.**** ******* ********** ..

107. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
gcggcagggggcttcatgcggcggtctccc	Protospacer
  **. . ****************.****

108. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 8, identity: 0.733 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
aggacttggggcttcatggggcggcctcct	Protospacer
 **...  ********** **********

109. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MN586021 (Arthrobacter phage Beagle, complete genome) position: , mismatch: 8, identity: 0.733 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
tggatcatgggcttcatgccgcgagggtcc	Protospacer
***.*************** ***.   .*

110. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MT889394 (Arthrobacter phage Odyssey395, complete genome) position: , mismatch: 8, identity: 0.733 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
tggatcatgggcttcatgccgcgagggtcc	Protospacer
***.*************** ***.   .*

111. spacer 2.13|3247882|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 8, identity: 0.733 

tgaaaacgccgcttggtaattgttggggca	CRISPR spacer
caggaacgccgcctggtaattgtttggggt	Protospacer
....********.*********** ***

112. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.7 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
cgcggcgcgtcggtgttctgcatcgatgcc	Protospacer
.*************** *****.*...

113. spacer 2.1|3247089|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 9, identity: 0.7 

tgcggcgcgtcggtgtgctgcaccagctgg	CRISPR spacer
tgcggcgcgccggagtgctgcacgcagcac	Protospacer
*********.*** *********  . ..

114. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgatgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

115. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

116. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

117. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036407 (Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
atacaggctggcatggaaggcgcgctgctc	Protospacer
   *********.* ***********  .

118. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025017 (Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgatgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

119. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_012854 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

120. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053443 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

121. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

122. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_009939 (Deinococcus geothermalis DSM 11300 plasmid pDGEO02, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
gttcaggatggcgtcgatggcgcgccgctg	Protospacer
  ***** ********* *******.  ..

123. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

124. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

125. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

126. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

127. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

128. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

129. spacer 2.4|3247287|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.7 

tgtcaggctggcgtcgaaggcgcgctcgca	CRISPR spacer
ctcgacgctgccgtcgaaggcgcgctcatc	Protospacer
. . * **** ****************..

130. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 9, identity: 0.7 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
ttgccggacccgcccccgtcggcgccgccc	Protospacer
.  .. **** ********* ********

131. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.7 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
gggccgtcgcggcccccgtcttcgccgccg	Protospacer
 * ..    ************ ********

132. spacer 2.7|3247485|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021803 (Sinorhizobium meliloti strain USDA1021 plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.7 

caagcattggaggcgcaggcatgagcgagg	CRISPR spacer
atgccattggacgcgcaggcaagagcgttc	Protospacer
  . ******* ********* *****

133. spacer 2.11|3247749|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7 

ggtccttccggcactcagcagctgcgtcgc	CRISPR spacer
ctctgccccggctttcagcagctgcgtcgc	Protospacer
  .. ..***** .****************

134. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM085450 (Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.667 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
aaaaaaaaccggcccccgtctccgccgcat	Protospacer
 .    .************** ******

135. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT754167 (Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence) position: , mismatch: 10, identity: 0.667 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
aaaaaaaaccggcccccgtctccgccgcat	Protospacer
 .    .************** ******

136. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009107 (Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.667 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
aaaaaaaaccggcccccgtctccgccgcat	Protospacer
 .    .************** ******

137. spacer 2.5|3247353|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026778 (Shigella dysenteriae strain 69-3818 plasmid unnamed1) position: , mismatch: 10, identity: 0.667 

cgctttgaccggcccccgtctgcgccgccg	CRISPR spacer
aaaaaaaaccggcccccgtctccgccgcat	Protospacer
 .    .************** ******

138. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 10, identity: 0.667 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
caatcggcgggcttcatgcggcgccctcct	Protospacer
... . ..*************** *****

139. spacer 2.9|3247617|30|AP018518|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 10, identity: 0.667 

tgggtcatgggcttcatgcggcggcctcca	CRISPR spacer
caatcggcgggcttcatgcggcgccctcct	Protospacer
... . ..*************** *****

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 935538 : 940862 6 Stx2-converting_phage(33.33%) transposase NA
DBSCAN-SWA_2 1857823 : 1863749 8 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_3 3306415 : 3316772 9 Synechococcus_virus(14.29%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage