CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP018933	Zymobacter palmae IAM14233 DNA, complete genome	3 crisprs	WYL,DEDDh,cas7f,cas5f,cas8f,cas3-cas2,cas1,csa3,cas3,DinG	15	40	10	2
AP018934	Zymobacter palmae IAM14233 plasmid pZB5060 DNA, complete genome	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: AP018933_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018933_1

585349-586696

Orphan

I-F

Consensus_repeat	Method
GTTCGCTGCCGCACAGGCAGCTTAGAAA	PILER-CR
GTTCGCTGCCGCACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCGCTGCCGCACAGGCAGCTTAGAAA	CRT

22 spacers

WYL

The CRISPR arrays of AP018933_1

>merge|AP018933|1|585349-586696|PILER-CR,CRISPRCasFinder,CRT
GTTCGCTGCCGCACAGGCAGCTTAGAAAAAGTGGGTGAGCTGTGCTGTCGTGCCCATGAAGTTCGCTGCCGCACAGGCAGCTTAGAAAGGCAAATTCTAAGCCAGCAGAGCACTTAGAATGTTCGCTGCCGCACAGGCAGCTTAGAAAGACACACTGTCGGAAGGACTAAGGCGACTGGCGTTCGCTGCCGCACAGGCAGCTTAGAAAATGCCGCCACCGCGCCATTCTTCGGTTTTACGGTTCGCTGCCGCACAGGCAGCTTAGAAAATTAGTGACGCGACCGCTTCCTCGACCAGAATGTTCGCTGCCGCACAGGCAGCTTAGAAAAAAATGGCTTCCGTGAGCAAATCGTGACCAAGGTTCGCTGCCGCACAGGCAGCTTAGAAAATCGGGATGCCCGCGTTGCGCTTTTGGAATATGTTCGCTGCCGCACAGGCAGCTTAGAAAAACACTGAGGGGAACCGTCATGCAAACCGCCGGTTCGCTGCCGCACAGGCAGCTTAGAAAGTTAAGCAGGCCGCCAATGTACAGCGCTTGGTGTTCGCTGCCGCACAGGCAGCTTAGAAAATCTTCCTTGTTTAAATGCAAGTAATCTCATGGTTCGCTGCCGCACAGGCAGCTTAGAAAATCGCAAAGCCTGCTGGCTCTGGTTTTTTGTCGTTCGCTGCCGCACAGGCAGCTTAGAAATGCTTGCTCTCTACCTTCACCTTGCCGGAACGGTTCGCTGCCGCACAGGCAGCTTAGAAAAGCCTCGAAGGCTGTACGGATAGCCTCCCAGTGTTCGCTGCCGCACAGGCAGCTTAGAAATTCTTATTAGCCGTAATAGTTCGTGGACGTTGGTTCGCTGCCGCACAGGCAGCTTAGAAAATTCAGCACCAGAGTCTTTGATGCGCTCAATTGTTCGCTGCCGCACAGGCAGCTTAGAAATGAAACGGCTCTTGCTCCGGCGAGGATTGCTCGTTCGCTGCCGCACAGGCAGCTTAGAAATCTCGCAAGTCATGAAGATTCATGCAGTCATGGTTCGCTGCCGCACAGGCAGCTTAGAAAAATACCCGCCAGCATAGTCATTATCGACATATGTTCGCTGCCGCACAGGCAGCTTAGAAAATCGGGCTGTCCATTTCCAAAGTGCCGTCAGCGTTCGCTGCCGCACAGGCTGCTTAGAAAAAGTGGTCGTCGAAGGCTCCCGAGGACATCGTGTTCGCTGCCGCACAGGCAGCTTAGAAAATGCCGGATATCGTCGCGCAGCGCGATAGAGAGTTCGCTGCCGCATAGGCAGCTTAGAAATGCAAACAAGTCTGCAGGAATCCTACAAACTAGTGCGCTGCCGCATAGGCAGTTTGAAAA

>AP018933|1|1|585349-586636|PILER-CR
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAGTGGGTGAGCTGTGCTGTCGTGCCCATGAA
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GGCAAATTCTAAGCCAGCAGAGCACTTAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GACACACTGTCGGAAGGACTAAGGCGACTGGC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGCCACCGCGCCATTCTTCGGTTTTACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTAGTGACGCGACCGCTTCCTCGACCAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAAATGGCTTCCGTGAGCAAATCGTGACCAAG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGATGCCCGCGTTGCGCTTTTGGAATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AACACTGAGGGGAACCGTCATGCAAACCGCCG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GTTAAGCAGGCCGCCAATGTACAGCGCTTGGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCTTCCTTGTTTAAATGCAAGTAATCTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGCAAAGCCTGCTGGCTCTGGTTTTTTGTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGCTTGCTCTCTACCTTCACCTTGCCGGAACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AGCCTCGAAGGCTGTACGGATAGCCTCCCAGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TTCTTATTAGCCGTAATAGTTCGTGGACGTTG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTCAGCACCAGAGTCTTTGATGCGCTCAATT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGAAACGGCTCTTGCTCCGGCGAGGATTGCTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TCTCGCAAGTCATGAAGATTCATGCAGTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AATACCCGCCAGCATAGTCATTATCGACATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGCTGTCCATTTCCAAAGTGCCGTCAGC
GTTCGCTGCCGCACAGGCTGCTTAGAAA	AAGTGGTCGTCGAAGGCTCCCGAGGACATCGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGGATATCGTCGCGCAGCGCGATAGAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA

>AP018933|1|1|585349-586696|CRISPRCasFinder
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAGTGGGTGAGCTGTGCTGTCGTGCCCATGAA
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GGCAAATTCTAAGCCAGCAGAGCACTTAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GACACACTGTCGGAAGGACTAAGGCGACTGGC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGCCACCGCGCCATTCTTCGGTTTTACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTAGTGACGCGACCGCTTCCTCGACCAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAAATGGCTTCCGTGAGCAAATCGTGACCAAG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGATGCCCGCGTTGCGCTTTTGGAATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AACACTGAGGGGAACCGTCATGCAAACCGCCG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GTTAAGCAGGCCGCCAATGTACAGCGCTTGGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCTTCCTTGTTTAAATGCAAGTAATCTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGCAAAGCCTGCTGGCTCTGGTTTTTTGTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGCTTGCTCTCTACCTTCACCTTGCCGGAACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AGCCTCGAAGGCTGTACGGATAGCCTCCCAGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TTCTTATTAGCCGTAATAGTTCGTGGACGTTG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTCAGCACCAGAGTCTTTGATGCGCTCAATT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGAAACGGCTCTTGCTCCGGCGAGGATTGCTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TCTCGCAAGTCATGAAGATTCATGCAGTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AATACCCGCCAGCATAGTCATTATCGACATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGCTGTCCATTTCCAAAGTGCCGTCAGC
GTTCGCTGCCGCACAGGCTGCTTAGAAA	AAGTGGTCGTCGAAGGCTCCCGAGGACATCGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGGATATCGTCGCGCAGCGCGATAGAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAAACAAGTCTGCAGGAATCCTACAAACTA
GTGCGCTGCCGCATAGGCAGTTTGAAAA

>AP018933|1|1|585349-586696|CRT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAGTGGGTGAGCTGTGCTGTCGTGCCCATGAA
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GGCAAATTCTAAGCCAGCAGAGCACTTAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GACACACTGTCGGAAGGACTAAGGCGACTGGC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGCCACCGCGCCATTCTTCGGTTTTACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTAGTGACGCGACCGCTTCCTCGACCAGAAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AAAATGGCTTCCGTGAGCAAATCGTGACCAAG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGATGCCCGCGTTGCGCTTTTGGAATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AACACTGAGGGGAACCGTCATGCAAACCGCCG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	GTTAAGCAGGCCGCCAATGTACAGCGCTTGGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCTTCCTTGTTTAAATGCAAGTAATCTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGCAAAGCCTGCTGGCTCTGGTTTTTTGTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGCTTGCTCTCTACCTTCACCTTGCCGGAACG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AGCCTCGAAGGCTGTACGGATAGCCTCCCAGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TTCTTATTAGCCGTAATAGTTCGTGGACGTTG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATTCAGCACCAGAGTCTTTGATGCGCTCAATT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TGAAACGGCTCTTGCTCCGGCGAGGATTGCTC
GTTCGCTGCCGCACAGGCAGCTTAGAAA	TCTCGCAAGTCATGAAGATTCATGCAGTCATG
GTTCGCTGCCGCACAGGCAGCTTAGAAA	AATACCCGCCAGCATAGTCATTATCGACATAT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATCGGGCTGTCCATTTCCAAAGTGCCGTCAGC
GTTCGCTGCCGCACAGGCTGCTTAGAAA	AAGTGGTCGTCGAAGGCTCCCGAGGACATCGT
GTTCGCTGCCGCACAGGCAGCTTAGAAA	ATGCCGGATATCGTCGCGCAGCGCGATAGAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAAACAAGTCTGCAGGAATCCTACAAACTA
GTGCGCTGCCGCATAGGCAGTTTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
AP018933.1\|BBG29332.1\|579109_579346_-\|translation-initiation-factor-1	unknown	unknown	gnl\|CDD\|178954
AP018933.1\|BBG29337.1\|587570_587945_+\|lactoylglutathione-lyase-and-related-lyases	unknown	unknown	gnl\|CDD\|319922
AP018933.1\|BBG29344.1\|594646_595522_-\|citrate-lyase-beta-subunit	unknown	unknown	gnl\|CDD\|225184
AP018933.1\|BBG29336.1\|586813_587497_+\|predicted-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
AP018933.1\|BBG29333.1\|579645_580317_-\|Leu/Phe-tRNA-protein-transferase	unknown	unknown	gnl\|CDD\|234720
AP018933.1\|BBG29340.1\|590310_590661_+\|uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|225197
AP018933.1\|BBG29327.1\|570810_571470_-\|16S-rRNA-uridine-516pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|211334
AP018933.1\|BBG29328.1\|571893_572292_+\|uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|225038
AP018933.1\|BBG29341.1\|590744_591767_-\|citrate-lyase-synthetase	unknown	unknown	gnl\|CDD\|173920
AP018933.1\|BBG29338.1\|588392_589142_+\|dehydrogenases-with-different-specificities	unknown	unknown	gnl\|CDD\|235546
AP018933.1\|BBG29331.1\|575542_579001_-\|ATPase-components-of-ABC-transporters	unknown	unknown	unknown
AP018933.1\|BBG29334.1\|580534_584218_+\|DNA-segregation-ATPase-FtsK/SpoIIIE-family	unknown	unknown	gnl\|CDD\|236669
AP018933.1\|BBG29335.1\|584436_585084_+\|outer-membrane-lipoprotein-sorting-protein	unknown	unknown	gnl\|CDD\|178807
AP018933.1\|BBG29345.1\|595533_595824_-\|citrate-lyase,-gamma-subunit	unknown	unknown	gnl\|CDD\|377721
AP018933.1\|BBG29339.1\|589226_590216_+\|NADPH:quinone-reductase	unknown	unknown	gnl\|CDD\|176248
AP018933.1\|BBG29342.1\|591726_593094_-\|triphosphoribosyl-dephospho-CoA-synthetase	unknown	unknown	gnl\|CDD\|132169
AP018933.1\|BBG29329.1\|572318_574595_+\|ATPase-with-chaperone-activity,-ATP-binding	unknown	unknown	gnl\|CDD\|236828
AP018933.1\|BBG29326.1\|570176_570653_-\|NTP-pyrophosphohydrolases	unknown	unknown	gnl\|CDD\|239647
AP018933.1\|BBG29343.1\|593090_594629_-\|citrate-lyase,-alpha-subunit	unknown	unknown	gnl\|CDD\|225593
AP018933.1\|BBG29330.1\|574701_575565_-\|Sel1-like-protein	unknown	unknown	gnl\|CDD\|223861

Protein	Function_ID	Function_description	E-value
AP018933.1\|BBG29332.1\|579109_579346_-\|translation-initiation-factor-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.70038e-37
AP018933.1\|BBG29337.1\|587570_587945_+\|lactoylglutathione-lyase-and-related-lyases	gnl\|CDD\|319922	cd07261, EhpR_like, phenazine resistance protein, EhpR. Phenazine resistance protein (EhpR) in Enterobacter agglomerans confers resistance by binding D-alanyl-griseoluteic acid and acting as a chaperone involved in exporting the antibiotic rather than by altering it chemically. EhpR is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.	2.39446e-34
AP018933.1\|BBG29336.1\|586813_587497_+\|predicted-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.78262e-59
AP018933.1\|BBG29333.1\|579645_580317_-\|Leu/Phe-tRNA-protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.91563e-122
AP018933.1\|BBG29340.1\|590310_590661_+\|uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	6.90784e-22
AP018933.1\|BBG29327.1\|570810_571470_-\|16S-rRNA-uridine-516pseudouridylate-synthase	gnl\|CDD\|211334	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE. This group is comprised of bacterial proteins similar to E. coli RluE. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. Escherichia coli RluE makes psi2457 in 23S RNA. psi2457 is not universally conserved.	1.56292e-86
AP018933.1\|BBG29328.1\|571893_572292_+\|uncharacterized-conserved-protein	gnl\|CDD\|225038	COG2127, COG2127, Uncharacterized conserved protein [Function unknown].	7.0476e-38
AP018933.1\|BBG29341.1\|590744_591767_-\|citrate-lyase-synthetase	gnl\|CDD\|173920	cd02169, Citrate_lyase_ligase, Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.	1.1321e-104
AP018933.1\|BBG29338.1\|588392_589142_+\|dehydrogenases-with-different-specificities	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.7078e-75
AP018933.1\|BBG29339.1\|589226_590216_+\|NADPH:quinone-reductase	gnl\|CDD\|176248	cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
AP018933.1\|BBG29334.1\|580534_584218_+\|DNA-segregation-ATPase-FtsK/SpoIIIE-family	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
AP018933.1\|BBG29335.1\|584436_585084_+\|outer-membrane-lipoprotein-sorting-protein	gnl\|CDD\|178807	PRK00031, lolA, outer membrane lipoprotein chaperone LolA.	2.45947e-64
AP018933.1\|BBG29345.1\|595533_595824_-\|citrate-lyase,-gamma-subunit	gnl\|CDD\|377721	pfam06857, ACP, Malonate decarboxylase delta subunit (MdcD). This family consists of several bacterial malonate decarboxylase delta subunit (MdcD) proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyzes the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcC is the (apo) ACP subunit. The family also contains the CitD family of citrate lyase acyl carrier proteins.	1.62189e-21
AP018933.1\|BBG29344.1\|594646_595522_-\|citrate-lyase-beta-subunit	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	3.49259e-95
AP018933.1\|BBG29342.1\|591726_593094_-\|triphosphoribosyl-dephospho-CoA-synthetase	gnl\|CDD\|132169	TIGR03125, citrate_citG, triphosphoribosyl-dephospho-CoA synthase CitG. Triphosphoribosyl-dephospho-CoA is transferred to, and becomes the prosthetic group of, the respective acyl carrier protein subunits of both citrate lyase and malonate decarboxylase. Members of this protein family are triphosphoribosyl-dephospho-CoA synthases specifically from citrate lyase systems. This protein sometimes occurs as a fusion protein with CitX, the phosphoribosyl-dephospho-CoA transferase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Energy metabolism, Fermentation].	1.93513e-66
AP018933.1\|BBG29329.1\|572318_574595_+\|ATPase-with-chaperone-activity,-ATP-binding	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
AP018933.1\|BBG29326.1\|570176_570653_-\|NTP-pyrophosphohydrolases	gnl\|CDD\|239647	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	7.74119e-49
AP018933.1\|BBG29343.1\|593090_594629_-\|citrate-lyase,-alpha-subunit	gnl\|CDD\|225593	COG3051, CitF, Citrate lyase, alpha subunit [Energy production and conversion].	0
AP018933.1\|BBG29330.1\|574701_575565_-\|Sel1-like-protein	gnl\|CDD\|223861	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only].	7.92726e-06

>AP018933.1|BBG29335.1|584436_585084_+|outer-membrane-lipoprotein-sorting-protein
MAVMNTMTQWGKACLAGVALMSMTPWAGADELSAAQHLTQRLEPVTSYAADFSQRIEGNGHVSQQSKGQMWVARPGKFRWVVDAPYSQVVVSDGKEVYLHDPDLDQVTIRKLDPQVTNTPALLLSGQASELVHSYSVTEKTQGSKEVYTLKPKSTDSLFDRLQMTFDSSRLSSLDMYDASGQHTQVAFSNVQPNAQISDSTFHFQIPKGAEVIRE
>AP018933.1|BBG29334.1|580534_584218_+|DNA-segregation-ATPase-FtsK/SpoIIIE-family
MVTVSSKKGTPSSRANAKRGASPKTPRKRQNARKRQQAQASRTPGRVTTTLQGAAKDGVTVILLSLGTFLLLAFFSHTMSDPSWFHTGPENTRVANWMGHVGALVSDSLYSLFGTAALWWPALCALGAWQLVRRRIASFTWDTTVLAVRMAGLTLVLLGTCLLEALFSNIQQLKDHSFDIVGQGLRSGLTAPLGQHGATLVGISLVLCGVPLLTGLSWLTLMDEIGKALFRGLRGVGRFVRDRLLMAKERYDERRDARLPVSDELDDDVAAEPSWLSRKLSHLANTLGIHRGEPELDAYRSEPTSAVAPEHNVKPVRYAPYERPYPGSMTDSVDDSEEDAPALTIRARRDEQDERDAAPVPSVSTVADSRIPWDEAEQSDAAVAEQAERYRQTLQSLREAEERKAKEEEEALRRAAVSAPTRVDEPHEHADAPLITPQQEEPAPRREVPIVRAPAPDEVDEKNSDDVDASTIDVVKPMPAPLAAVHPVPVEAVAAWPAIAATQVAVNEPVFTPTAPISASTQDAVDEPEAREAAVHEEQVHERQGSVDDRTAPAARSSAASDDEMPAFTPRFMVDMDDEGEAEHVPEAPAPASAFDATPLSAADEEDDGDYGDDEADDVYAVHEPVRPSSVSMPVQPPASVALHKPEPQYVEDEQDEDEYADDEPLDLPERPLTPLSPRDSDNVAPASTMPISALDDDEDELVEDDGPKLWTVEHLQQRDENQHVEIIGEMPGIQLLTPADEQQPSYSEEELQQMAELLEMRLKEYGVKAEVVNISPGPVITQFEIMPAAGVKGSKISSLSKDLARSLLVKSVRVIEVIYGKPTVGIEIPNPHRAMIRLREVLDSDIYRNARSPLTVALGHNIGGHSVVADLAKMPHVLVAGTTGSGKSVGVNAMLISILMKSRPEDVRMILIDPKMLELSVYDDIPHLLAPVVTDMKEAANALRWCVAEMERRYKLMSKMGVRNIAGFNDKLDQAHAAGAQVADPLWDADTHAPGAQPDTLKKLPYIVVVIDEFADMFMIVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVVTGLIKANIPSRIAFQVSSRIDSRTILDQGGAEALLGHGDMLYLAVGESTPTRIHGAFVDDDEVHRVVEDWKRRGKPEYDEEILSGGVSADALTGLEAEGEGGDAEQDVLYDEAVKFVTQTRRVSISSVQRKFKIGYNRAARLVEAMEMAGVVSSMGSNGSREVLAPPPISD
>AP018933.1|BBG29333.1|579645_580317_-|Leu/Phe-tRNA-protein-transferase
MLYWLEEHPVAFPAVEDALDEPNGLLAAGGALTPEWLLTAYMNGIFPWFNAEDPILWWTPDPRMVLYPNEFRCRRSLAKRIRNGGFTLTFDTAFKEVMQYCGSLRDDTWISPQMVRAYHDLHLLGYAHSLEVWHDGELVGGLYGLALGRIFYGESMFSRCPDASKVALAHLATLPSEYGFALIDCQVHSDHLASLGAREIARSEFNAALRQHASLERWHPPMQ
>AP018933.1|BBG29332.1|579109_579346_-|translation-initiation-factor-1
MAREDHIEMEGFVIDTLPNTQFRVRIGDDMHDEKAPVVTAHISGKMRKNYIRILTGDRVKVELTPYDLTKGRIVYRSR
>AP018933.1|BBG29331.1|575542_579001_-|ATPase-components-of-ABC-transporters
MGKMSTNNFDFDIKSSTQQKSCSNVFALGCKSCMRLPGIPIFPVRYSACSIDGNGAIPKLPNDIISAFTSITLDQYIDNEESIKKGSPFNRYILRKLRKGYMYIYDEIYGGQWQCFGIYPSGELIAFAPEAPIPITSLNNFSCKTPENSYISSIVTIPNGESRNIYVSYVEYPWSIQHMDRLKNDVSMRQDCMQEYKITSSRDDTIKSNNGLLRSYSEITDYLPEYNSKYSKYALGKIDITSIVIPDSPLKTKEKTEEQHAIENALSSVAHDRQSHPGLMMIVHDEIGLIEQLKNLRQEPYNRTQIKVIERPNGLGLRELYWLQSVQKLEEGISLQFEEEIKEIYKKDSPEAHEQFIKEGTKLFEGINENQRNPSPFDIDNYSESSRVVKFHDQEIQNTSLMRSRVISEFRKYYDNDKRKYLEEYFDPCIEDFEKSKFILDANYCDWIRHHLEHALKRYDTTVLEYSAYAVHILGSLLDEGSILTINSQRLWQWLHEESTNNSSSILARGICCNHDETRSHYNASQLTENDPKDLKSNPEEFESNEAPSVFTDTLKIKNWYDVVKKGQKLHEKWKDIRTKELTTPLNAWRAGWKDFWKPYKQLQQALTTSRIALYQKHLAQLRAEIPISWKNATNVSPTLKQLQIAGAIEAAIANEPVESRTFGISKTKVSYETLLKSVEINNNNYKKYSSTSFHDYTPSSFKTGSKNTSSKASGNFTYGIKELYQSTENKNIKEDSKENNGRFYTSEKNQQINSSSEKIQKAKGDLVELNTSHKINYFAISDMHTDIPEAILSDEEKVLIAEQEKVAEAWTKGKSSVIYANLIMSFLNMKNAINSLGKKDAGLEEWWKVIGSSIATLQAAGDLMSNVTSYRSANALRVAQKLDLAKKANILKFETSLLGKTIAIIGIIDSLITFAKAYQKYKNGGTTRDMHIEMAIGTLSLLGSIISLSAGSAVLAPVLLTLIILIIGLSFLLTHLVPKNIENWLRRSLYGKDQETVKGKIFQSMEIEQSSLQMVLKGITVDVELDHAILKSESSEDLKTYVFKSKIEYPKNINENIEMTLKNNMNGNKIATITRNTDGEIKNIFLGKIAMSRLSEKELSIIKNKTSAENFYTIDITYIIGINRDIEKTLDLSFEILLSGSLKRDVFYVSI
>AP018933.1|BBG29330.1|574701_575565_-|Sel1-like-protein
MYFMYPYKSITGIITISILAVYSSYSNASMIVYERDDIEKIANENNIKEIEHCAEKGSSACSTILGGAYYWGLSFYDKRININDSIAIRYFKNSLIESLTSRSILSVIIEKERSLESKALLTSAATERYYPAVYRLAHPDYLKTNEIRQESIKWRKIQMDMEPSTGSDEKGFIGSIYLQMTPPDYTNALYWLNRAITEEDDMLAERNIAKLYAEGKGVEKDYITAYMYYDLAGTAGAEEKSKLAELMTPEQVQEGLSRSHEWQDEHHSYRPGYGAWNDMGGIEWHVH
>AP018933.1|BBG29329.1|572318_574595_+|ATPase-with-chaperone-activity,-ATP-binding
MLSKELELTLNAAFAAARSKRHEFMTVEHLLLALLDNASAADVLTACGAQIDILRAELQSFINSTTPLIPETQVDTRETQPTLGFQRVLQRAVFHVQSSGKEEVDGASVLVAIFSEQESQAVYLLGLQDVSRIDVVNYIAHGISRDDDMSMRSGDAEGEASSEAGSAPEPSPLKRYAVDLNEEARQGNIDPLIGRDHELTRVIQTLVRRRKNNPLLVGEAGVGKTAIAEGLARRIVDGDVPEIMREAVVYSLDMGALLAGTKYRGDFEKRLKALLQALNDVPYSILFIDEIHTIIGAGSASNGVMDASNLLKPLLSSGKLRCVGATTFQEYRGIFEKDHALARRFQKIDVEAPSVEDTCRILKGLRSRFEAHHKVSYTDGAIDAAVRLSERYINDRQLPDKAIDVIDEAGAHQQLKPEGERISTLDVEQIENVVAWMARIPPRQVSRSDREMLGSLERNLKMMIFGQHQAIDGLASAIKLARAGLAAPDRPVGSFLFTGPTGVGKTEVARQLAKQLGIELVRFDMSEYMEHHTVSRLIGAPPGYIGYDQGGLLTEAVTKQPHCVLLLDEIEKAHPDVFNLLLQVMDRGRLTDNNGREADFRNVILIMTSNVGATDSARRSIGFQEQDHTTDTGEAIRRTFTPEFRNRLDSIITFKPLDTDAIHRVVDKCLIELQAQLDEKRVQLDVDHDAREWLAEKGYDKAMGARPMMRLVQTSIKVPLADMLLFGELAEHGGIVRIRVNEKGDALALSTDKAVADA
>AP018933.1|BBG29328.1|571893_572292_+|uncharacterized-conserved-protein
MWPRMHNKTATAASTAPLIMNMSDDSDSAADADGLDHLTEEEERTELAEPRWYDVVLFNDDFTPMDFVVDILERFFGMGGEQAVQIMMTVHTQGKAVCGRYPYDIAATRAWMVNEHAREHEHPLLCDIERAD
>AP018933.1|BBG29327.1|570810_571470_-|16S-rRNA-uridine-516pseudouridylate-synthase
MSTLYLLNKPFHTLCQFTDERHEGEPRKTLAPLIAVPNVYPAGRLDYDSEGLLLLTDDGALAHRITHPSQKLPKTYWVQVEGAPDDDALQRLRHGVTLKDGPTRPAKVRRIDTPEVPERIPPVRFRASIPTHWLEITISEGRNRQVRRMTAHVGLPTLRLIRVAIGPWTLEGIAPGEWRKETVHLPQQAASSSPNRQKRGPRQGPAGKRPVRGTQRPSS
>AP018933.1|BBG29326.1|570176_570653_-|NTP-pyrophosphohydrolases
MKDNRWMPHATVATVIFDGERYLLTEEINRGASRVDYPTLFNQPAGHLEPNETLIEAARRETREECGWEVTLTGYLRLYTRAWKQTVYHSHAFIATPDHPVDTPLDEGIVAAHWLTWEEIQALDAEGKLRSPLVRMRIEDYQAGLCFPLDVLKELHPA
>AP018933.1|BBG29336.1|586813_587497_+|predicted-transcriptional-regulator
MTRAERLLVLIQKLRCYRYPVTAAVLAESLGVSKRTLYRDIAQLQHQGARIEGSAGVGYMLREGFILPPLMFSSDEIEALVLGLQWVAQNADEMLGQAAVDVQAKVRAVLPERMAEVLDLPALKLGPSEHQVTSCHLSALRDAIRHQFVVELAYHDQQGRSSSRRIWPMAIAFFDASRVLVAWCELRQDFRHFRTDRIDSLCVHEERYPRHRQTLLHTWKAQMGITD
>AP018933.1|BBG29337.1|587570_587945_+|lactoylglutathione-lyase-and-related-lyases
MPTADMTILFVENPIKSLAFYSSLFTVRQHEVHPSFVLLVFENGFQLALWSRFTAEPLVTAPAGGCEVMFTVASKDALEALYLEWGVTHGVTIYQKPALLDFGYTFAALDPDGHRLRVAYLRDA
>AP018933.1|BBG29338.1|588392_589142_+|dehydrogenases-with-different-specificities
MRFKNKVAVVTGATNGIGERVAERLYAEGACVVIASRSAALVEKKARALSHDRQRVLGIACDVADPASVRQMIEQAVAHFGRIDLAVNSAGITGDSGRPIAEQSIDNWNQVMATTLSGVFHCMKYELPQLVAAAGGAIVNLSAVNGLVGIAGLGPYTVAKHGVIGLTQTAALEYACDGIRINAVAPGYVDTPRMHEFPEAVRHGFAEAHPLQRMATVDEVASFILFLLSGDAGFCTGGIFPIDGGYLAR
>AP018933.1|BBG29339.1|589226_590216_+|NADPH:quinone-reductase
MFNAIVIRQHDQRQHVAVESLNESLLPQGDVTVAVTCSTVNYKDALAITGRSPVVREFPMVPGIDFAGTVIASSSKAFTCGDQVVLNGWGVGEAWWGGLAEKACVKSEWLIALPAGMVSREAMAIGTAGYTAMLSIMALEQHGVTPDKGPILVTGATGGVGSYAVALLATLGYTVIASTGKAAQADYLRQLGAVDILDREPLSAPGKPLAKAQWAGAIDCVGSHTLANVLAATRYGGTVAACGLAQGMALPASVAPFILRGVTLVGIDSVMQPLPTRIAAWQRLSELLSGSQLQAISTMIGLNEVIGSAEALLNGDIHGRLVVDMASQH
>AP018933.1|BBG29340.1|590310_590661_+|uncharacterized-protein-conserved-in-bacteria
MAIPQVLEYAQQRFGTLPDYPWARDPDHAVLRHATHRKWYGLVARIPGERLGLSTAAKVEILNVKVRPEHVGGLLMQDGIVPAYHMNKEHWVSVLLAQVAMEEVITLLEDSYALTA
>AP018933.1|BBG29341.1|590744_591767_-|citrate-lyase-synthetase
MPTTRQHSMLHINDYPRLPRFQCRALAAFLERHQLHFAEDIDGAVLAETEAGDIVGCLAHQDDVLKYFCVADDHRDEGLGSQLISTLINRLLREYSGVRAFTSPCRAATFESLGFQRLAATSHYALLEFGPRGLDDYLNAVRARLPSTAMPVNAVVLNANPFTLGHRYLVQQAAAHGLQTLVFVVANDHSRFRFKDRLAMVETGCRDLPGVTVCSGGAYMVSGATFPHYFLKQTDHDALAHYQGELDATLFATRIAPALNITQRVIGEEPLSPVTAAYNAALHETLPAYGIQVIELARREQAGSVISASRVRALLDAEDNAWEALVPETTRDYILTHGLN
>AP018933.1|BBG29342.1|591726_593094_-|triphosphoribosyl-dephospho-CoA-synthetase
MNRAAILSAREQRAQEKQRLLAKWPVIVSLSFNLPGLPKSTPLTQAAFDDVAQALTHYLCAHRCALHPQPTVHDAAGDHVLWAGRPSCDAVALKALTERFEGEHPLGRLLDVDIYTPEGPIRSGKNKRCLICDAPALVCMRAQRHSLETLRAYCDQQLADWWDTQQASRHARMLASSMTRALLDEVLLTPKPGLVDQQDCGSHDDMDLPLFVQAISALSPYWERVARQGIAFDGENGHDALIALRRLGLEMEAAMRQATHGINTHKGAIFLGCLAVFAHAYAWRCGSSSHPEDYRRIVRHLSRDLVARDMKALHNDHSYGQRLLQTYEDARVGGPRYQAEHGLPAVFDHGLPALEAALNSGSTADTASLHALLTLMAHVLDTNVLHRSSLSVTHRFMALAQQAAATLPPRAEDIEHLQAFCRRHWISAGGCADLLAITLFFHYADHATTLHAAYQ
>AP018933.1|BBG29343.1|593090_594629_-|citrate-lyase,-alpha-subunit
MNSTLPQHIAGYGDVTPFQGSAAYLDRPIPPRVAAPTRRSTPHGSKQRSSLQAAIEACHPFDGMTVSFHHHLRVGDSVVMQTIELLAQMGIKDIRLAASSLTSAHEGLVPYLQNGTVTRIWTSGVRSGLGEAISAGQLATPVVIHSHGGRARAITTGELTIDLAVIAAASADEQGNCTGTVGPSAFGSIGYAQVDAQYARQTIVVSDTIVPYPCVPVSIPQTQIDHVVKVDAIGDVRKIASGSTRITKSPVDLLLARRVADVLHASQAMTPGFNFQLGSGGASLAVAKFLRPYLRDEQLKGGFLLGGIVAEAVALKQEGFFDAIVDVQSFDSAVATSMAEDPHHLEISADTYANPFNGGCMTDLVDICVLSALEVDTDFNVNVITGSQGVIMAASGGHSDTAFGAKLTVVVCPSFRGRVPTLVERVTTCVTPGEDIDLLVTERGICVNPRRPELEARLKAAHLPVVDIHTLKAKVDKLLGVPAPQRFNDRIVGVVQYRDGSVIDVIRQRRGA
>AP018933.1|BBG29344.1|594646_595522_-|citrate-lyase-beta-subunit
MRIKKYRSMLYVPGNNPAMVQQATIYGADSVLLDLEDAIAPDEKDAARDLLRHHIPLLDRENCVLTVRVNGLDTPLGEQDVRAMVPLQLDAIRVPKVESAVAMQQLDALITELEREHGITQPVEIHAMIETARGVMNAADIATSTPRISALTFGAQDLLADLGLRRTDRAGLTFPRGQILMAAKAARLHVLDTPFIDIEDEDGLRASAEEAKSLGFTGKAVINPRQIDIVNQVFSPSPEEVTHAIRVVGSFNAHKAAGSGVFALDGKMVDRPVVEQAITVLRLADIDPATL
>AP018933.1|BBG29345.1|595533_595824_-|citrate-lyase,-gamma-subunit
MRPLMTQQTSAHAGSLESCDILVTLERCPVGQGRTLQLNIAMPELYGEHIHALIEHHLDQLGLHDVRVTAEDKGALDATILARLDTAFMRLTASAA

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Crispr_ID: AP018933_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018933_2

1055987-1057635

TypeI-F

I-F

Consensus_repeat	Method
GTTCGCTGCCGCATAGGCAGCTTAGAAA	PILER-CR
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CRT

27 spacers

cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of AP018933_2

>merge|AP018933|2|1055987-1057635|PILER-CR,CRISPRCasFinder,CRT
TTTCTAAGCTGCCTATGCGGCAGCGAACCAGAGACGATGCAAGCAAGCTCTCCGTCAAGATTTCTAAGCTGCCTATGCGGCAGCGAACTGGGTAGCCAAGACCGCCACGCAAGCCTTTGTTTTCTAAGCTGCCTATGCGGCAGCGAACGGATTTCATCGATAACTTGACGGCGTTGCGCTTTTCTAAGCTGCCTATGCGGCAGCGAACTTGACCTTGCCCTGTAGCGTGCTGCCCATATTTTTCTAAGCTGCCTATGCGGCAGCGAACCGGTGTTGATTCATTTGTCAACGTAGTGTCTATTTCTAAGCTGCCTATGCGGCAGCGAACTAAATCACCAGACGGTAGGGATTATGCGGTCTTTTCTAAGCTGCCTATGCGGCAGCGAACCCGTATCGAGGGCAACGCAGCAGGCAACCGCTTTTCTAAGCTGCCTATGCGGCAGCGAACTCCTGATGATGCTTTCGTCTTCGCCGCCTTTCTTTCTAAGCTGCCTATGCGGCAGCGAACCTCTAGCGATTCGCGCCAGTCGTAGCCAGCAGTTTCTAAGCTGCCTATGCGGCAGCGAACGCAAGCTGAAATAGATTCAGCCGGATACCCGTTTTCTAAGCTGCCTATGCGGCAGCGAACGTTTCTTTGCCTTTCGGGGGGGCACTCTTCTTTTTCTAAGCTGCCTATGCGGCAGCGAACTTACGCTCTTCAGCAGCAGACTGAGCGGACTTTTTCTAAGCTGCCTATGCGGCAGCGAACAGAGGCTGTTCATGGTATCAATGTGGCACCGTTTTCTAAGCTGCCTATGCGGCAGCGAACAAATGGGGTGATTACTCCGAGGCGGAGCGCCTTTTCTAAGCTGCCTATGCGGCAGCGAACCTGATTCCCCGACAGTTCTGTGTACGTGACCACTTTCTAAGCTGCCTATGCGGCAGCGAACAGAAGTACCAGCGCGCAGAGTCCACTCCCCAGTTTCTAAGCTGCCTATGCGGCAGCGAACATTACAGAGGTGACCTCCACTGCTTCGTCCCCTTTCTAAGCTGCCTATGCGGCAGCGAACTTGCTTGCCGTTGTCAGATACCTTCAGGTAGATTTCTAAGCTGCCTATGCGGCAGCGAACAATGAGGATGGGACACTACAGAGAGCATCTATTTTCTAAGCTGCCTATGCGGCAGCGAACTAGCTCTAGGATATCTCCGCGTAGAGTTTCGCTTTCTAAGCTGCCTATGCGGCAGCGAACAAACGCGACACCCCCACAGCCAGCGGCGTTCATTTCTAAGCTGCCTATGCGGCAGCGAACGGACCGCCTGAACATCCATCAGCTCATCCGGCTTTCTAAGCTGCCTATGCGGCAGCGAACGCGGCCTCCATCAGCCCGCCACAGCTCACTGTTTTCTAAGCTGCCTATGCGGCAGCGAACGCGAACTGCTGCTGCGACAGCACAGCAATGAGTTTCTAAGCTGCCTATGCGGCAGCGAACAGCGAATCGAAGCGATCGGGTGTCGAAGTAGTTTTCTAAGCTGCCTATGCGGCAGCGAACAAGTACACGGTGGGAGGTGGTAAGGGTTCAGATTTCTAAGCTGCCTATGCGGCAGCGAACTCGGTCATGTCGATGAGTAAAGCCTCGGGCAATTTCTAAGCTGCCTATGCGGCAGCGAAC

>AP018933|2|2|1055987-1057635|PILER-CR
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CAGAGACGATGCAAGCAAGCTCTCCGTCAAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TGGGTAGCCAAGACCGCCACGCAAGCCTTTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGATTTCATCGATAACTTGACGGCGTTGCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGACCTTGCCCTGTAGCGTGCTGCCCATATT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CGGTGTTGATTCATTTGTCAACGTAGTGTCTA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAAATCACCAGACGGTAGGGATTATGCGGTCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CCGTATCGAGGGCAACGCAGCAGGCAACCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCCTGATGATGCTTTCGTCTTCGCCGCCTTTC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTCTAGCGATTCGCGCCAGTCGTAGCCAGCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCAAGCTGAAATAGATTCAGCCGGATACCCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GTTTCTTTGCCTTTCGGGGGGGCACTCTTCTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTACGCTCTTCAGCAGCAGACTGAGCGGACTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAGGCTGTTCATGGTATCAATGTGGCACCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAATGGGGTGATTACTCCGAGGCGGAGCGCCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTGATTCCCCGACAGTTCTGTGTACGTGACCAC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAAGTACCAGCGCGCAGAGTCCACTCCCCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	ATTACAGAGGTGACCTCCACTGCTTCGTCCCC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGCTTGCCGTTGTCAGATACCTTCAGGTAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AATGAGGATGGGACACTACAGAGAGCATCTAT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAGCTCTAGGATATCTCCGCGTAGAGTTTCGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAACGCGACACCCCCACAGCCAGCGGCGTTCA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGACCGCCTGAACATCCATCAGCTCATCCGGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGGCCTCCATCAGCCCGCCACAGCTCACTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGAACTGCTGCTGCGACAGCACAGCAATGAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGCGAATCGAAGCGATCGGGTGTCGAAGTAGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAGTACACGGTGGGAGGTGGTAAGGGTTCAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCGGTCATGTCGATGAGTAAAGCCTCGGGCAA
TTTCTAAGCTGCCTATGCGGCAGCGAAC

>AP018933|2|2|1055987-1057635|CRISPRCasFinder
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CAGAGACGATGCAAGCAAGCTCTCCGTCAAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TGGGTAGCCAAGACCGCCACGCAAGCCTTTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGATTTCATCGATAACTTGACGGCGTTGCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGACCTTGCCCTGTAGCGTGCTGCCCATATT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CGGTGTTGATTCATTTGTCAACGTAGTGTCTA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAAATCACCAGACGGTAGGGATTATGCGGTCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CCGTATCGAGGGCAACGCAGCAGGCAACCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCCTGATGATGCTTTCGTCTTCGCCGCCTTTC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTCTAGCGATTCGCGCCAGTCGTAGCCAGCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCAAGCTGAAATAGATTCAGCCGGATACCCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GTTTCTTTGCCTTTCGGGGGGGCACTCTTCTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTACGCTCTTCAGCAGCAGACTGAGCGGACTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAGGCTGTTCATGGTATCAATGTGGCACCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAATGGGGTGATTACTCCGAGGCGGAGCGCCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTGATTCCCCGACAGTTCTGTGTACGTGACCAC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAAGTACCAGCGCGCAGAGTCCACTCCCCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	ATTACAGAGGTGACCTCCACTGCTTCGTCCCC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGCTTGCCGTTGTCAGATACCTTCAGGTAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AATGAGGATGGGACACTACAGAGAGCATCTAT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAGCTCTAGGATATCTCCGCGTAGAGTTTCGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAACGCGACACCCCCACAGCCAGCGGCGTTCA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGACCGCCTGAACATCCATCAGCTCATCCGGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGGCCTCCATCAGCCCGCCACAGCTCACTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGAACTGCTGCTGCGACAGCACAGCAATGAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGCGAATCGAAGCGATCGGGTGTCGAAGTAGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAGTACACGGTGGGAGGTGGTAAGGGTTCAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCGGTCATGTCGATGAGTAAAGCCTCGGGCAA
TTTCTAAGCTGCCTATGCGGCAGCGAAC

>AP018933|2|2|1055987-1057635|CRT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CAGAGACGATGCAAGCAAGCTCTCCGTCAAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TGGGTAGCCAAGACCGCCACGCAAGCCTTTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGATTTCATCGATAACTTGACGGCGTTGCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGACCTTGCCCTGTAGCGTGCTGCCCATATT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CGGTGTTGATTCATTTGTCAACGTAGTGTCTA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAAATCACCAGACGGTAGGGATTATGCGGTCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CCGTATCGAGGGCAACGCAGCAGGCAACCGCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCCTGATGATGCTTTCGTCTTCGCCGCCTTTC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTCTAGCGATTCGCGCCAGTCGTAGCCAGCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCAAGCTGAAATAGATTCAGCCGGATACCCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GTTTCTTTGCCTTTCGGGGGGGCACTCTTCTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTACGCTCTTCAGCAGCAGACTGAGCGGACTT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAGGCTGTTCATGGTATCAATGTGGCACCGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAATGGGGTGATTACTCCGAGGCGGAGCGCCT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	CTGATTCCCCGACAGTTCTGTGTACGTGACCAC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGAAGTACCAGCGCGCAGAGTCCACTCCCCAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	ATTACAGAGGTGACCTCCACTGCTTCGTCCCC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TTGCTTGCCGTTGTCAGATACCTTCAGGTAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AATGAGGATGGGACACTACAGAGAGCATCTAT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TAGCTCTAGGATATCTCCGCGTAGAGTTTCGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAACGCGACACCCCCACAGCCAGCGGCGTTCA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GGACCGCCTGAACATCCATCAGCTCATCCGGC
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGGCCTCCATCAGCCCGCCACAGCTCACTGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	GCGAACTGCTGCTGCGACAGCACAGCAATGAG
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AGCGAATCGAAGCGATCGGGTGTCGAAGTAGT
TTTCTAAGCTGCCTATGCGGCAGCGAAC	AAGTACACGGTGGGAGGTGGTAAGGGTTCAGA
TTTCTAAGCTGCCTATGCGGCAGCGAAC	TCGGTCATGTCGATGAGTAAAGCCTCGGGCAA
TTTCTAAGCTGCCTATGCGGCAGCGAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP018933.1\|BBG29750.1\|1052188_1052881_+\|ATPase	unknown	unknown	gnl\|CDD\|274571
AP018933.1\|BBG29759.1\|1068734_1069322_+\|adenine/guanine-phosphoribosyltransferases	unknown	unknown	gnl\|CDD\|235028
AP018933.1\|BBG29763.1\|1071605_1073375_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
AP018933.1\|BBG29761.1\|1069842_1070547_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
AP018933.1\|BBG29749.1\|1051170_1051887_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
AP018933.1\|BBG29745.1\|1045621_1047664_-\|methionyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234655
AP018933.1\|BBG29758.1\|1065348_1066335_-\|hypothetical-protein	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
AP018933.1\|BBG29760.1\|1069330_1069792_+\|xanthine-guanine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
AP018933.1\|BBG29747.1\|1049072_1049642_+\|deoxycytidine-deaminase	unknown	unknown	gnl\|CDD\|234753
AP018933.1\|BBG29746.1\|1048154_1048958_+\|ATPase	unknown	unknown	gnl\|CDD\|378455
AP018933.1\|BBG29762.1\|1070652_1071282_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
AP018933.1\|BBG29757.1\|1061956_1065352_-\|predicted-helicases	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
AP018933.1\|BBG29751.1\|1052923_1053346_-\|uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|376651
AP018933.1\|BBG29744.1\|1044704_1045619_-\|predicted-NADH:ubiquinone-oxidoreductase	unknown	unknown	gnl\|CDD\|235347
AP018933.1\|BBG29754.1\|1058347_1059367_-\|ABC-type-Fe3+-hydroxamate-transport-system	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
AP018933.1\|BBG29752.1\|1053211_1053340_+\|hypothetical-protein	unknown	unknown	unknown
AP018933.1\|BBG29753.1\|1053749_1055906_+\|arginine/lysine/ornithinede-carboxylases	unknown	unknown	gnl\|CDD\|237434
AP018933.1\|BBG29756.1\|1060411_1061821_-\|exoribonuclease-R	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
AP018933.1\|BBG29755.1\|1059422_1060328_-\|superoxide-dismutase	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|378221
AP018933.1\|BBG29748.1\|1049967_1051101_+\|uncharacterized-protein-conserved-in-bacteria	unknown	unknown	gnl\|CDD\|379191

Protein	Function_ID	Function_description	E-value
AP018933.1\|BBG29750.1\|1052188_1052881_+\|ATPase	gnl\|CDD\|274571	TIGR03420, DnaA_homol_Hda, DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP. [DNA metabolism, DNA replication, recombination, and repair].	1.65251e-97
AP018933.1\|BBG29759.1\|1068734_1069322_+\|adenine/guanine-phosphoribosyltransferases	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.81111e-93
AP018933.1\|BBG29763.1\|1071605_1073375_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
AP018933.1\|BBG29749.1\|1051170_1051887_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.23666e-80
AP018933.1\|BBG29745.1\|1045621_1047664_-\|methionyl-tRNA-synthetase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
AP018933.1\|BBG29758.1\|1065348_1066335_-\|hypothetical-protein	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
AP018933.1\|BBG29760.1\|1069330_1069792_+\|xanthine-guanine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	1.6574e-73
AP018933.1\|BBG29747.1\|1049072_1049642_+\|deoxycytidine-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	2.87236e-111
AP018933.1\|BBG29748.1\|1049967_1051101_+\|uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	8.18544e-93
AP018933.1\|BBG29762.1\|1070652_1071282_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	3.85856e-125
AP018933.1\|BBG29757.1\|1061956_1065352_-\|predicted-helicases	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
AP018933.1\|BBG29751.1\|1052923_1053346_-\|uncharacterized-conserved-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	3.72541e-59
AP018933.1\|BBG29744.1\|1044704_1045619_-\|predicted-NADH:ubiquinone-oxidoreductase	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	6.52238e-70
AP018933.1\|BBG29754.1\|1058347_1059367_-\|ABC-type-Fe3+-hydroxamate-transport-system	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
AP018933.1\|BBG29761.1\|1069842_1070547_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	2.41394e-146
AP018933.1\|BBG29753.1\|1053749_1055906_+\|arginine/lysine/ornithinede-carboxylases	gnl\|CDD\|237434	PRK13578, PRK13578, ornithine decarboxylase; Provisional.	0
AP018933.1\|BBG29756.1\|1060411_1061821_-\|exoribonuclease-R	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.22312e-136
AP018933.1\|BBG29755.1\|1059422_1060328_-\|superoxide-dismutase	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.60407e-104
AP018933.1\|BBG29746.1\|1048154_1048958_+\|ATPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	2.34628e-144

>AP018933.1|BBG29753.1|1053749_1055906_+|arginine/lysine/ornithinede-carboxylases
MKPLKIAANATVACRLITDRPIVALGQTDFTDVGAVVLTRQELDTGILSVLQRTGFGVPAFIVRDEHDASDALPEGCAWLALDEPAHSDKLEQSIKHYRRHLLPPFFDTLSRYVGLGNSSFACPGHQGGRFFLRHPAGRLFHDFYGEHLFRSDICNADVRLGDLLIHEGAALEAQQYAAKVFNADQTFFVLNGTSAANKVVTNALLAPGDLVLFDRNNHKSVHHGALIQAGATPIYLETARNPYGFIGGIDDKALNEANLRGKIRSVAPGRETSARPFRLAVIQLATYDGTLYNAQQIVRRIGHLCDYILFDSAWAGYEQFIDILSDCSPLLLTLTPDDPGIIVTQSVHKQLAGFSQASQIHKKDAHIKGQVRYCNHRQFNNAFMLHASTSPFYPIFAALEVNARIHDGGAGTPLWHECMRLGIDIRKALRTRCTQIRPFIPDAIDGRPWESYPTEQIVHDGRFFACAAKAKWHAFEGYGDRQYLIDPCKLLLTTPGVDAATGQYADFGVPATLLAHYLRVQGIIPEKSDLYSILFLLTPAEDAAKMQHLVEVLVSFERHLEADSPLSEVLPHLYERYRERYCGYTLRQLCQEMHDINVRHDMKALQKAMFRAESMPEVVMLPQQANHALVRGDVELLPLAAVRGRVAAEGALPYPPGILCVVPGEAWSDAAWTYFMALEQLVKTLPGFAPELQGVKIMQSATDDTSQLMAYVVRESA
>AP018933.1|BBG29752.1|1053211_1053340_+|hypothetical-protein
MLDERVKQTHIDLAQFCAQCMLYFIRNEMKASAKRGKSEFFL
>AP018933.1|BBG29751.1|1052923_1053346_-|uncharacterized-conserved-protein
MWLQKELRLSPFRRGFHLITDEIEHALSAELRQINVGLLHAFIKHTSASLTINENADPTVRVDFESFFNHAVPENEPYYRHTYEGSDDMPAHLKSSLLGPSVQIPVSAGRLNLGTWQGIYLCEHRNHGGRRTLVLTLQGE
>AP018933.1|BBG29750.1|1052188_1052881_+|ATPase
MPWQLPLGVGIHDDATFASFLPGDNAGAIAALKLQLQRADEPLVYLWGNEETGRSHLLQAACHDASDQGMRSLYVPLQQLGHFPPLMLEDTEHLDLLALDDIDVVMGRKRWEEGLFHCFNRMRDAGKRMVVSAPCAPRQLDVKLPDLASRLGWGMTFHLSPPTDEQRRDALILRAAMRGMQLPHEVARYILHRGPRRLSELFEVLDRLDMASLSAKRKLTIPFVREALEW
>AP018933.1|BBG29749.1|1051170_1051887_-|phosphoribosylglycinamide-formyltransferase
MDDKTDSGFTPEQVPPRRIVALLSGEGNRLEALIEAQSHDELGGELVAVIADRTDTAGTEKAHAAGIDVAILPRDEYDTPTAYDGALIKTIERHAPDLVVLDGFWHIFSPIFTSRFNGRLLNCHPSLLPALVGRHTHQRALDEGLQEHGASVHFVIEGLNTGPLIIQAVAKVASDDTAETLAEKVLAREELIYPIAIRWFLEGRLKLGAQGAELDGILLPPTGLRLSNEDAEEELNGE
>AP018933.1|BBG29748.1|1049967_1051101_+|uncharacterized-protein-conserved-in-bacteria
MQWFAGSALAVLFSVPLASGMEGATQIRMPCPMGDCSAGVSLNYIGEYSLPWDTQFDGIPFGGISGLDFDPATGHYLAISDDRSQKAPARIYELAIDIQPGQIRRVDVVRTITLKDRNGQPFAAGSVDPESVRRGPNNQLYWTSEGSARAGLPSVVRVADNNGAWVKEFSVPEGFAPTADRQSGIRDNLAFEGLAVLPSGDLIAGMETSLRQDGSIARLTSGSLARFVRYDARSGQPTAAYTYPVSPVPQPALRSPYSNDNGVSEVVALDDHRLLVIERSFASGYGATIKVFMADIAGATDVLHLSSLANTNQRITPIRKSQLIDFRAMGLVPDNIESVALGRAADGSEVLVFASDDNFSVHQKNQFFAFKIEQRPH
>AP018933.1|BBG29747.1|1049072_1049642_+|deoxycytidine-deaminase
MSIKSDHWIRRMARDHGMIEPFEADQVRNAEDGQRVISYGTSSYGYDVRCANEFKVFTNIFSATVDPKNFDDRSFVDVTGDVCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTNLPAKIYANEGVAQMLFFESDEICDVSYGDRNGKYQGQRGVTLPRT
>AP018933.1|BBG29746.1|1048154_1048958_+|ATPase
MANTVGHIIAVASGKGGVGKSTVTANLALAMAARGKRVGVLDADIYGPSQAHMLGVDPQTRPDMIDDKTMRPVDAHGLRVMSIAFLVDVTTPMVWRGPMASTAFQQLYNQTQWGELDYLFIDMPPGTGDIQLTLAQKVPVSGAVIVTTPQDIALLDAERGIEMFRKVHVPVLGIVENMSFHTCSCCGHQEAIFGEGGGQRIAERYNAPVLGRLPLALSVREQMDKGVPPVIAAPDQPAAQHFASIVAQLDEACQAQPEASGPTIGFS
>AP018933.1|BBG29745.1|1045621_1047664_-|methionyl-tRNA-synthetase
MSRRKILVTSALPYANGDIHLGHLLEYIQTDMWVRFQKSRGHECHYVCADDAHGTAIMLRAEQEGITPEELIARVNEAHQADFAKFGVHFDNYSSTNSDENRHFSGEIYRRLRDAGHIATRDIEQMYDPEKGLFLADRFIKGTCPKCHTPDQYGDNCEACGTTYTPAELINPVSAISGATPELRTSTHYFFKLPDFKEFLQEWLQSGTVQPQIANKLQEWFENGLKEWDISRDAPYFGFEIPDAPNKFFYVWVDAPIGYVTSFKQLADREGLDFDSYWGPNADAELYHFIGKDIVYFHALFWPSMLKGANMRLPTGINCHGFVTVNGAKMSKSRGTFIKADTYAQFLEPEYLRYYFAAKLNSRVEDLDLNLEDFVTRVNSDVVGKVVNIASRCAGFIKKAGGRLSSTVTEPELLQRFIDAGDDIAAAFEAREFNQGVRQIMALADDANTYIADKAPWALAKQEGKEQEVLDICSTGINLFRQLMTYLYPILPAMATKAQAFLQVDSLSWDSRLQPLIDHAIAPFKPLAQRVDPKAIEQMLDASKEVLAEEQQIRNGGQDAKAETAAAAMEPIADEITIDDFFKVDLRIARIANAGYVEGSKKLLQLTLDLGGETRNVFSGIRGHYEPEQLIGRLTVMVANLAPRKMRFGVSEGMVLATGNDDGLYLLSPDCGAQPGQRVS
>AP018933.1|BBG29744.1|1044704_1045619_-|predicted-NADH:ubiquinone-oxidoreductase
MQASHITADQIDALLPQTQCGKCGHPGCLPYAKAIVDGEAINRCPPGGQRTADALATLLDKAPLPLAQPAESPLLAVIDEDICIGCTKCIKACPVDAILGAPKQMHSILRDECTGCELCVMPCPVDCISMVPHPGWLAAHAEQEQHAWLAHRATQGRQRHQAHIARIAQWEAEALERRRTRRHQRIATPTSPAASTPTDDAALRRRLKIKLARMKRDDSLRPQLEAQLQALGGQTAARPVTPVVQQARSQRIALAAAEDTLRRAERHLAHCQRQEGPMEVAAAQEQLERAQHQLERARQALDPT
>AP018933.1|BBG29754.1|1058347_1059367_-|ABC-type-Fe3+-hydroxamate-transport-system
MSDLKTASVLAFERKLDPSDALLFAGSWDNRDQEHWQPIAVREKSVRGTISNRLKAKDSDPAKLDAQVQNPNLQTIDVATLPHSADTLRARFTLRVLGEFGRPSACNSAAYQARLQEVTEHYINTFGFSTLAQRYANNLANARFLWRNRMAAEQIEVRVRVLNKGEQEALFSFDALSYSLREFKEDEQINALAVLIADALAGKRHLLLEITAFARMGAGQEVFPSQELILDRESHKSRTLYCLDNVAGIHSQKVGNALRTIDTWYPQPENARDYGPIAIEPYGSITTQGVALRQPKKKPKLDFYNLFDNWLLKNEVPDEEQQHYVMAILIRGGVFGEAG
>AP018933.1|BBG29755.1|1059422_1060328_-|superoxide-dismutase
MTAFIGLMHALERQCAQDGIALCFHGIGVVCHEAKPQTSRSSFGQHSFLLTRNPLKNDGKTAAIVEEGRMHVELSLVLMLSGNASEGTQEERMALAKQLDDYVHRMRIAGGSVLPRENIRSENLRRPHHHQVPHIEPLALEDDAQYTKQLNRLKRRLLPGFALILREDALAQHKNALQEAQPDASLLDAWLDLSRFNYRYDADAAEKQHWPLVRRPSGWLVPIPIGYCALSDEIPANAIANARDPYTPLRFVEPLLSIGEWRSPHRLQCIEEMLWRIKPNSDERLFLLEMLVQAPVDGDVI
>AP018933.1|BBG29756.1|1060411_1061821_-|exoribonuclease-R
MPSPLSADALAIRSLIEGFIAERRDIKLEKLSPDDERYSKIVEQFEREAWLEDAARRVCQLQVVTHVLKGIHPDAKGTNLFVRPEELPTTNALGSHASQGQLSDVTGNAAALDVYKFLKLEHQGRSLLDRLSCQCPDTLAALSDSAVIAKEWAASFAAITVAKGTPASHVCAKQMYWLKGLDATCNDDYVLLAPLFPSSLVHDAFQKIQHDRFSEEAKEARKAYKAGKPSDNEVHRYPEMAIRKLGGTKPQNISQLNSERGGSNILLSGLPPQWNASHIRPILNTRSAFGQLRQQRGFYRPLNELRKFLHSDPIANIATRRKVRRLIERAMDSVIDFTMKMHELPPGWSAINTLLEDGTTQRCDLHKHEKHWLDPFRAATDAAFRHERQHTHWQEELRRDIAREINRVLNRGSNSLGASDTEIQEWRHRALQHTSLRSMDSINADYMCELDKQLEETIAFLGDEEEGLA
>AP018933.1|BBG29757.1|1061956_1065352_-|predicted-helicases
MNILLISQCQKNALKETRRILDQFAERKGERTWQTSITNAGLNTLRMLLRKRARRNTAVACHWIRGQNHSELLWIVGNASQFNETGTVPTNMTRRDILRQDDEDNWHALDKVRWLASIAALFHDLGKATDAFQEKLRGKKLERNRYRHEWVSLRLLEAFVGQDSDEQWLKRLCSQEGKATSAWLDMMKKDGIDVPAAPPFRGLPPLASAIGWLIVTHHRLPLMPSFQDDGSQSWLGDKAVRWQDELTSGLHNVTAYWNEAFRPIEDDISVWWKCSQGLPVADPNWHKRAKRLAEQAFKAPWWKEDHSSLLASPYIMHLARLCLMMADHHYSSLSKGMDDRFKPRVLYANTMLDRQAWPNVKRQPNQTLTDHLLGVTRCAGEVAHRLPSLEKGLRGITQHRLFRRRSCLARFRWQDRAFDLAESLQERSQQQGFFGVNMASTGCGKTLANGRIMYALAHPRRGARFTVALGLRTLTLQTGNAYRRHLKLSEDDLAIRVGGSAQMALYRHAIDQNEKESLSGSSSDEALINDGSQIDYVDRLDPHPLLHTFIHDPRAQQFISAPIMTCTIDHLMPATESIRGGHQIAPMLRLMTSDLVLDEPDDFDIKDFPALTRLVYWAGLYGSRVMLSSATLPPFMVQGLFEAYKTGRQQFRQHQGDPAAQDAICCAWFDEQHCSASNCSTQEDFEHAHDAFVRQRHAFLEEKTLQQPIRHGSILSTERIRHSPDTLYEDMAERLIAQAVALHKKHHGTAPDGQHVSFGLIRMANINPLVAVAHRMFSQEAPRGIVIHLCVYHSQFPLLLRSRKEQMLDAILDRHDPDAIYHHPDIAPLLAEAPNQQHIFIVLGSPVTEVGRDHDYDWAIVEPSSIRSIIQLAGRVQRHRQTPSATPNIALLNTNLCAIKYPQSPAFMRPGFEDDRRWHLQKHYLDQGLLPDGFLNGIDSRPRLVTPAFSRPPNPRQYLAPSDTLCSLEHQRIGYVMKPAFHARYPTIRPQPVVGAFSVYQHPYVTLTGILPQHQPFREQVRRQADFAFMPDESFEHESFCRVQDDYEQTLNTTVEYLIERTDLKPSCNVRPWGDADYLRALTALANLMQISVEECAWRFGRLTLPDVEQENGAPKKWAYHPVVGISHYSD
>AP018933.1|BBG29758.1|1065348_1066335_-|hypothetical-protein
MMDDIHASDLKTILHSKRANLYYLQHCRVLVNGGRVEYVTDEQQRSRYWNIPIANTTCLLLGTGTSITQAAMRELAKAGVMVGFCGGGGTPLFTANEVEMPVSWMSPQSEYRPTEYLQQWCRFWFDDALRLAAAKHFQSARLKQIRQHWLNQRFQRDNDFAPSESALNSALGAMERSLSSIPDTTMLLTEEARMTKHLYALAVRSTGYDTDFTRASRGNGMDPANHFLDHGNYLAYGLAATACWVLGLPHGMAVLHGKTRRGGLVFDVADIVKDALILPQAFISAARGDTEQEFRQACIERMTQHEALDTMINVLQDTAATLSAEVQA
>AP018933.1|BBG29759.1|1068734_1069322_+|adenine/guanine-phosphoribosyltransferases
MTSTLADTSSQQNGTSVYGDYIKSVIRTVRDWPNPGVNFRDITPLLQNSAAFRKLIDSFVHRYQELNIDAIAAIDARGFIIGAPLAYEMGCSFVPVRKKGKLPFKTISETYKLEYGEATVELNSDAFKKGDRIVVVDDLIATGGTMLAAAKLIERTGGEVVETAAIIDLPELGGSRHIREAGHNVFAVCSFTESE
>AP018933.1|BBG29760.1|1069330_1069792_+|xanthine-guanine-phosphoribosyltransferase
MASSERYQRYFKVSWDRLQNDIRELCKDLEGRTFKGIIAIARGGLIPTGLFAQEMGLRNIDTLCVQSYDAMSQREGVTVDKGVDHDGEGWLLIDDLVDTGKTARIVRELLPKALFITVYAKPEGRPLVDRFHTEVSQDTWVVFPWEPNPPADA
>AP018933.1|BBG29761.1|1069842_1070547_+|uracil-DNA-glycosylase
MTTSVLPDDWNAELGQEFEAPYMQKLKAFLRTRKDAHRVIYPHSSNWFRAFQLTPLEQVKVVILGQDPYHGPGQAHGLCFSVRPGVATPPSLVNIYKELATDDVPFQPVNHGFLESWAQQGIMMLNSVLTVEQGQAGSHRNQGWETFTDRAIEVINRRCPHVVFLLWGSYAQKKAAFVDRQRHLVLHAPHPSPLAAHRGFFGCRHFSQANQFLVAKGMAPIEWQLPSHVEPMAH
>AP018933.1|BBG29762.1|1070652_1071282_+|uracil-phosphoribosyltransferase
MAVYAIDHPLVKHKVGLMRSANLSTKLFRELASEVAELLTYEATRGLELEKRTIEGWSGEPLLVDKIKGKKVTIVPILRAGIGMMDGVTNLIPSARISVVGLYRNEETLEPVPYFEKFVSQLDERLALIIDPMLATGGSVIATIDMLKKHKCREIKVIVLVAAPEGIKRVQDAHPDVDIYAASVDDGLNEHGYIVPGLGDAGDKLFGTR
>AP018933.1|BBG29763.1|1071605_1073375_+|gamma-glutamyltransferase
MKLAHTLAFSSFLLGTLPAVSPSVMAATLPAVEARHAMVVSAQALAAQVGADILKQGGNAIDAAVAVGYAEAVVNPCCGNIGGGGFMTLHLADGRDLFVDFRETAPAAASANMYLTPEGNVRKGESMYGYRAVGVPGTVKGLTLVHRQFGRLTRQQVMAPAIKLAREGFVLTRADTDIMDAKVDLFRKDTETARIFLRPDGSAWQPGDRFVQRDLAHTLQAISAKGDEAFYQGRIPAAIAAASRQHGGLLTESDFARYEAKMRTPLSCDYRGYKVISAPPPSSGGVTLCETLNIMEGYDLTKSGFNSAATLHVMTEALRRAYADRNTYLGDPDFIDNPVSHLLDKHYAATLRASITDRATPSADIRPPADLPERPETTHYSVMDEAGNAVSTTFTINGRFGSGIIAPGTGFLLNDEMDDFTVKVGEQNSYGLVQGDRNAIAPNKRPLSSMAPTIVTYKGQVYMVIGTPGGSRIITTVLQTISNVIDHHMSLQEAVDAPRIHHQWWPDRIFYETRGLSADTQAALKAQGYTLQEQTPWSGVAAIMKGLPDISEQSVESSGNDGVLSGKVRAGYVYGSNDARRPAGAAKGF

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Crispr_ID: AP018933_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018933_3

1066572-1067800

TypeI-F

I-F

Consensus_repeat	Method
GTTCGCTGCCGCATAGGCAGCTTAGAAA	PILER-CR
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CRT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	PILER-CR

20 spacers

cas1,cas3-cas2,cas8f,cas5f,cas7f

The CRISPR arrays of AP018933_3

>merge|AP018933|3|1066572-1067800|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTCGCTGCCGCATAGGCAGCTTAGAAATGCCTGTCACTCCGTCCCTGGTGTGCTCGTATGTTCGCTGCCGCATAGGCAGCTTAGAAATTTAAGGGGAAACAGGTTTCAGGAGAAGCAATGTTCGCTGCCGCATAGGCAGCTTAGAAACTTGAAAAACCTAAAGAATTTTTTGATTATTATGTTCGCTGCCGCATAGGCAGCTTAGAAAAAGCAGAGAACCAAAAATTTTCTGAGCCTCTTGTTCGCTGCCGCATAGGCAGCTTAGAAATATATGCTCCGTTACTTTTCCTGATGGGCAGAGTTCGCTGCCGCATAGGCAGCTTAGAAATGCAATCTTATTCCATCATTTGGACTCTTATTGTTCGCTGCCGCATAGGCAGCTTAGAAAGCAAAGGCAGCGATTAACGTTGTGGACCTGCGGTTCGCTGCCGCATAGGCAGCTTAGAAATATTTGTCGCGCTTTCTAAGTTTCCTCTCATGGTTCGCTGCCGCATAGGCAGCTTAGAAAATCACGAACTTAAATCCGGTCGTAATCTCGCTGTTCGCTGCCGCATAGGCAGCTTAGAAAGTGACGCGATCCGCGCAGGGAATGACGTCTTCGTTCGCTGCCGCATAGGCAGCTTAGAAAGTCTGTGCCCGCATGAACACGCCCCGTGCGTCGTTCGCTGCCGCATAGGCAGCTTAGAAAAATAGCGCTCCCCGTCGCCGGGGGTAAGCCCCGTTCGCTGCCGCATAGGCAGCTTAGAAAAAAACTGCGAATGATCCTTACGAATCGTCGGTGTTCGCTGCCGCATAGGCAGCTTAGAAAATCAGTGATGCCGTAGTGATAAAGCTCTGCGCGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGAGTTCGCGACGTATTCAGCAACCCATGTGTTCGCTGCTGCATAGGCAGCTTAGAAATAAGTGACAAATATAGTTTAGCCTCTGCCCTCGTTCGCTGCTGCATAGGCAGCTTAGAAAACGTGACAAATCGTGGGCGCGCGGACTCATCGGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGGCCAAGCCCGTGGACAAGGACGACAGCCGTTCGCTGCCGCATAGGCAGCTTAGAAATTACGAGACGCCGCTAGCGCACGCAACACAACGTTCGCTGCCGCATAGGCAGCTTAGAAAAGTAAACGTGCGGCTATCGCTGACTGTGCCATGTTTGCTGCCGCATAGGCAGCTTAGAAC

>AP018933|3|3|1066572-1067800|PILER-CR
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCCTGTCACTCCGTCCCTGGTGTGCTCGTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTTAAGGGGAAACAGGTTTCAGGAGAAGCAAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CTTGAAAAACCTAAAGAATTTTTTGATTATTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAGCAGAGAACCAAAAATTTTCTGAGCCTCTT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATATGCTCCGTTACTTTTCCTGATGGGCAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAATCTTATTCCATCATTTGGACTCTTATT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GCAAAGGCAGCGATTAACGTTGTGGACCTGCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATTTGTCGCGCTTTCTAAGTTTCCTCTCATG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCACGAACTTAAATCCGGTCGTAATCTCGCT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTGACGCGATCCGCGCAGGGAATGACGTCTTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTCTGTGCCCGCATGAACACGCCCCGTGCGTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AATAGCGCTCCCCGTCGCCGGGGGTAAGCCCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAAACTGCGAATGATCCTTACGAATCGTCGGTGTTCGCTGCCGCATAGGCAGCTTAGAAAATCAGTGATGCCGTAGTGATAAAGCTCTGCGCGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGAGTTCGCGACGTATTCAGCAACCCATGTGTTCGCTGCTGCATAGGCAGCTTAGAAATAAGTGACAAATATAGTTTAGCCTCTGCCCTCGTTCGCTGCTGCATAGGCAGCTTAGAAAACGTGACAAATCGTGGGCGCGCGGACTCATCGGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGGCCAAGCCCGTGGACAAGGACGACAGCCGTTCGCTGCCGCATAGGCAGCTTAGAAATTACGAGACGCCGCTAGCGCACGCAACACAACGTTCGCTGCCGCATAGGCAGCTTAGAAAAGTAAACGTGCGGCTATCGCTGACTGTGCCAT
	ATCAGTGATGCCGTAGTGATAAAGCTCTGCGC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGAGTTCGCGACGTATTCAGCAACCCATGT
GTTCGCTGCTGCATAGGCAGCTTAGAAA	TAAGTGACAAATATAGTTTAGCCTCTGCCCTC
GTTCGCTGCTGCATAGGCAGCTTAGAAA	ACGTGACAAATCGTGGGCGCGCGGACTCATCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGGCCAAGCCCGTGGACAAGGACGACAGCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTACGAGACGCCGCTAGCGCACGCAACACAAC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGTAAACGTGCGGCTATCGCTGACTGTGCCAT
GTTTGCTGCCGCATAGGCAGCTTAGAAC

>AP018933|3|3|1066572-1067800|CRISPRCasFinder
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCCTGTCACTCCGTCCCTGGTGTGCTCGTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTTAAGGGGAAACAGGTTTCAGGAGAAGCAAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CTTGAAAAACCTAAAGAATTTTTTGATTATTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAGCAGAGAACCAAAAATTTTCTGAGCCTCTT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATATGCTCCGTTACTTTTCCTGATGGGCAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAATCTTATTCCATCATTTGGACTCTTATT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GCAAAGGCAGCGATTAACGTTGTGGACCTGCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATTTGTCGCGCTTTCTAAGTTTCCTCTCATG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCACGAACTTAAATCCGGTCGTAATCTCGCT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTGACGCGATCCGCGCAGGGAATGACGTCTTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTCTGTGCCCGCATGAACACGCCCCGTGCGTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AATAGCGCTCCCCGTCGCCGGGGGTAAGCCCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAAACTGCGAATGATCCTTACGAATCGTCGGT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCAGTGATGCCGTAGTGATAAAGCTCTGCGC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGAGTTCGCGACGTATTCAGCAACCCATGT
GTTCGCTGCTGCATAGGCAGCTTAGAAA	TAAGTGACAAATATAGTTTAGCCTCTGCCCTC
GTTCGCTGCTGCATAGGCAGCTTAGAAA	ACGTGACAAATCGTGGGCGCGCGGACTCATCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGGCCAAGCCCGTGGACAAGGACGACAGCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTACGAGACGCCGCTAGCGCACGCAACACAAC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGTAAACGTGCGGCTATCGCTGACTGTGCCAT
GTTTGCTGCCGCATAGGCAGCTTAGAAC

>AP018933|3|3|1066572-1067800|CRT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCCTGTCACTCCGTCCCTGGTGTGCTCGTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTTAAGGGGAAACAGGTTTCAGGAGAAGCAAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CTTGAAAAACCTAAAGAATTTTTTGATTATTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAGCAGAGAACCAAAAATTTTCTGAGCCTCTT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATATGCTCCGTTACTTTTCCTGATGGGCAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAATCTTATTCCATCATTTGGACTCTTATT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GCAAAGGCAGCGATTAACGTTGTGGACCTGCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATTTGTCGCGCTTTCTAAGTTTCCTCTCATG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCACGAACTTAAATCCGGTCGTAATCTCGCT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTGACGCGATCCGCGCAGGGAATGACGTCTTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTCTGTGCCCGCATGAACACGCCCCGTGCGTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AATAGCGCTCCCCGTCGCCGGGGGTAAGCCCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAAACTGCGAATGATCCTTACGAATCGTCGGT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCAGTGATGCCGTAGTGATAAAGCTCTGCGC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGAGTTCGCGACGTATTCAGCAACCCATGT
GTTCGCTGCTGCATAGGCAGCTTAGAAA	TAAGTGACAAATATAGTTTAGCCTCTGCCCTC
GTTCGCTGCTGCATAGGCAGCTTAGAAA	ACGTGACAAATCGTGGGCGCGCGGACTCATCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGGCCAAGCCCGTGGACAAGGACGACAGCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTACGAGACGCCGCTAGCGCACGCAACACAAC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGTAAACGTGCGGCTATCGCTGACTGTGCCAT
GTTTGCTGCCGCATAGGCAGCTTAGAAC

>AP018933|3|4|1067353-1067800|PILER-CR
	TGCCTGTCACTCCGTCCCTGGTGTGCTCGTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTTAAGGGGAAACAGGTTTCAGGAGAAGCAAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	CTTGAAAAACCTAAAGAATTTTTTGATTATTAT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAGCAGAGAACCAAAAATTTTCTGAGCCTCTT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATATGCTCCGTTACTTTTCCTGATGGGCAGA
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TGCAATCTTATTCCATCATTTGGACTCTTATT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GCAAAGGCAGCGATTAACGTTGTGGACCTGCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TATTTGTCGCGCTTTCTAAGTTTCCTCTCATG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	ATCACGAACTTAAATCCGGTCGTAATCTCGCT
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTGACGCGATCCGCGCAGGGAATGACGTCTTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	GTCTGTGCCCGCATGAACACGCCCCGTGCGTC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AATAGCGCTCCCCGTCGCCGGGGGTAAGCCCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AAAACTGCGAATGATCCTTACGAATCGTCGGTGTTCGCTGCCGCATAGGCAGCTTAGAAAATCAGTGATGCCGTAGTGATAAAGCTCTGCGCGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGAGTTCGCGACGTATTCAGCAACCCATGTGTTCGCTGCTGCATAGGCAGCTTAGAAATAAGTGACAAATATAGTTTAGCCTCTGCCCTCGTTCGCTGCTGCATAGGCAGCTTAGAAAACGTGACAAATCGTGGGCGCGCGGACTCATCGGTTCGCTGCCGCATAGGCAGCTTAGAAAAGCGGCCAAGCCCGTGGACAAGGACGACAGCCGTTCGCTGCCGCATAGGCAGCTTAGAAATTACGAGACGCCGCTAGCGCACGCAACACAACGTTCGCTGCCGCATAGGCAGCTTAGAAAAGTAAACGTGCGGCTATCGCTGACTGTGCCAT
	ATCAGTGATGCCGTAGTGATAAAGCTCTGCGC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGAGTTCGCGACGTATTCAGCAACCCATGT
GTTCGCTGCTGCATAGGCAGCTTAGAAA	TAAGTGACAAATATAGTTTAGCCTCTGCCCTC
GTTCGCTGCTGCATAGGCAGCTTAGAAA	ACGTGACAAATCGTGGGCGCGCGGACTCATCG
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGCGGCCAAGCCCGTGGACAAGGACGACAGCC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	TTACGAGACGCCGCTAGCGCACGCAACACAAC
GTTCGCTGCCGCATAGGCAGCTTAGAAA	AGTAAACGTGCGGCTATCGCTGACTGTGCCAT
GTTTGCTGCCGCATAGGCAGCTTAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP018933.1\|BBG29750.1\|1052188_1052881_+\|ATPase	unknown	unknown	gnl\|CDD\|274571
AP018933.1\|BBG29767.1\|1076846_1077905_-\|nucleotidyltransferase/DNA-polymerase	unknown	unknown	gnl\|CDD\|235035
AP018933.1\|BBG29759.1\|1068734_1069322_+\|adenine/guanine-phosphoribosyltransferases	unknown	unknown	gnl\|CDD\|235028
AP018933.1\|BBG29763.1\|1071605_1073375_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
AP018933.1\|BBG29766.1\|1075383_1076229_+\|formyltetrahydrofolate-hydrolase	unknown	unknown	gnl\|CDD\|235676
AP018933.1\|BBG29764.1\|1073536_1075240_-\|beta-lactamase-like-protein	unknown	unknown	gnl\|CDD\|223668
AP018933.1\|BBG29749.1\|1051170_1051887_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
AP018933.1\|BBG29768.1\|1078424_1078799_+\|predicted-ATP-dependent-protease	unknown	unknown	gnl\|CDD\|320084
AP018933.1\|BBG29758.1\|1065348_1066335_-\|hypothetical-protein	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
AP018933.1\|BBG29765.1\|1075272_1076232_-\|dehydrogenases-with-different-specificities	unknown	unknown	unknown
AP018933.1\|BBG29760.1\|1069330_1069792_+\|xanthine-guanine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
AP018933.1\|BBG29757.1\|1061956_1065352_-\|predicted-helicases	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
AP018933.1\|BBG29762.1\|1070652_1071282_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
AP018933.1\|BBG29751.1\|1052923_1053346_-\|uncharacterized-conserved-protein	unknown	unknown	gnl\|CDD\|376651
AP018933.1\|BBG29754.1\|1058347_1059367_-\|ABC-type-Fe3+-hydroxamate-transport-system	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
AP018933.1\|BBG29761.1\|1069842_1070547_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
AP018933.1\|BBG29753.1\|1053749_1055906_+\|arginine/lysine/ornithinede-carboxylases	unknown	unknown	gnl\|CDD\|237434
AP018933.1\|BBG29756.1\|1060411_1061821_-\|exoribonuclease-R	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
AP018933.1\|BBG29755.1\|1059422_1060328_-\|superoxide-dismutase	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|378221
AP018933.1\|BBG29752.1\|1053211_1053340_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
AP018933.1\|BBG29750.1\|1052188_1052881_+\|ATPase	gnl\|CDD\|274571	TIGR03420, DnaA_homol_Hda, DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP. [DNA metabolism, DNA replication, recombination, and repair].	1.65251e-97
AP018933.1\|BBG29767.1\|1076846_1077905_-\|nucleotidyltransferase/DNA-polymerase	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
AP018933.1\|BBG29759.1\|1068734_1069322_+\|adenine/guanine-phosphoribosyltransferases	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.81111e-93
AP018933.1\|BBG29763.1\|1071605_1073375_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
AP018933.1\|BBG29766.1\|1075383_1076229_+\|formyltetrahydrofolate-hydrolase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	0
AP018933.1\|BBG29764.1\|1073536_1075240_-\|beta-lactamase-like-protein	gnl\|CDD\|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	8.48168e-129
AP018933.1\|BBG29749.1\|1051170_1051887_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.23666e-80
AP018933.1\|BBG29768.1\|1078424_1078799_+\|predicted-ATP-dependent-protease	gnl\|CDD\|320084	cd16170, MvaT_DBD, DNA-binding domain of the bacterial xenogeneic silencer MvaT. MvaT is a xenogeneic silencer conserved in Pseudomonas which assists in distinguishing foreign from self DNA. It prefers binding to flexible DNA segments with multiple TpA steps, and forms nucleoprotein filaments through cooperative polymerization.	6.53986e-18
AP018933.1\|BBG29758.1\|1065348_1066335_-\|hypothetical-protein	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
AP018933.1\|BBG29760.1\|1069330_1069792_+\|xanthine-guanine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	1.6574e-73
AP018933.1\|BBG29757.1\|1061956_1065352_-\|predicted-helicases	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
AP018933.1\|BBG29762.1\|1070652_1071282_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	3.85856e-125
AP018933.1\|BBG29751.1\|1052923_1053346_-\|uncharacterized-conserved-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	3.72541e-59
AP018933.1\|BBG29754.1\|1058347_1059367_-\|ABC-type-Fe3+-hydroxamate-transport-system	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
AP018933.1\|BBG29753.1\|1053749_1055906_+\|arginine/lysine/ornithinede-carboxylases	gnl\|CDD\|237434	PRK13578, PRK13578, ornithine decarboxylase; Provisional.	0
AP018933.1\|BBG29756.1\|1060411_1061821_-\|exoribonuclease-R	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.22312e-136
AP018933.1\|BBG29755.1\|1059422_1060328_-\|superoxide-dismutase	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.60407e-104
AP018933.1\|BBG29761.1\|1069842_1070547_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	2.41394e-146

>AP018933.1|BBG29758.1|1065348_1066335_-|hypothetical-protein
MMDDIHASDLKTILHSKRANLYYLQHCRVLVNGGRVEYVTDEQQRSRYWNIPIANTTCLLLGTGTSITQAAMRELAKAGVMVGFCGGGGTPLFTANEVEMPVSWMSPQSEYRPTEYLQQWCRFWFDDALRLAAAKHFQSARLKQIRQHWLNQRFQRDNDFAPSESALNSALGAMERSLSSIPDTTMLLTEEARMTKHLYALAVRSTGYDTDFTRASRGNGMDPANHFLDHGNYLAYGLAATACWVLGLPHGMAVLHGKTRRGGLVFDVADIVKDALILPQAFISAARGDTEQEFRQACIERMTQHEALDTMINVLQDTAATLSAEVQA
>AP018933.1|BBG29757.1|1061956_1065352_-|predicted-helicases
MNILLISQCQKNALKETRRILDQFAERKGERTWQTSITNAGLNTLRMLLRKRARRNTAVACHWIRGQNHSELLWIVGNASQFNETGTVPTNMTRRDILRQDDEDNWHALDKVRWLASIAALFHDLGKATDAFQEKLRGKKLERNRYRHEWVSLRLLEAFVGQDSDEQWLKRLCSQEGKATSAWLDMMKKDGIDVPAAPPFRGLPPLASAIGWLIVTHHRLPLMPSFQDDGSQSWLGDKAVRWQDELTSGLHNVTAYWNEAFRPIEDDISVWWKCSQGLPVADPNWHKRAKRLAEQAFKAPWWKEDHSSLLASPYIMHLARLCLMMADHHYSSLSKGMDDRFKPRVLYANTMLDRQAWPNVKRQPNQTLTDHLLGVTRCAGEVAHRLPSLEKGLRGITQHRLFRRRSCLARFRWQDRAFDLAESLQERSQQQGFFGVNMASTGCGKTLANGRIMYALAHPRRGARFTVALGLRTLTLQTGNAYRRHLKLSEDDLAIRVGGSAQMALYRHAIDQNEKESLSGSSSDEALINDGSQIDYVDRLDPHPLLHTFIHDPRAQQFISAPIMTCTIDHLMPATESIRGGHQIAPMLRLMTSDLVLDEPDDFDIKDFPALTRLVYWAGLYGSRVMLSSATLPPFMVQGLFEAYKTGRQQFRQHQGDPAAQDAICCAWFDEQHCSASNCSTQEDFEHAHDAFVRQRHAFLEEKTLQQPIRHGSILSTERIRHSPDTLYEDMAERLIAQAVALHKKHHGTAPDGQHVSFGLIRMANINPLVAVAHRMFSQEAPRGIVIHLCVYHSQFPLLLRSRKEQMLDAILDRHDPDAIYHHPDIAPLLAEAPNQQHIFIVLGSPVTEVGRDHDYDWAIVEPSSIRSIIQLAGRVQRHRQTPSATPNIALLNTNLCAIKYPQSPAFMRPGFEDDRRWHLQKHYLDQGLLPDGFLNGIDSRPRLVTPAFSRPPNPRQYLAPSDTLCSLEHQRIGYVMKPAFHARYPTIRPQPVVGAFSVYQHPYVTLTGILPQHQPFREQVRRQADFAFMPDESFEHESFCRVQDDYEQTLNTTVEYLIERTDLKPSCNVRPWGDADYLRALTALANLMQISVEECAWRFGRLTLPDVEQENGAPKKWAYHPVVGISHYSD
>AP018933.1|BBG29756.1|1060411_1061821_-|exoribonuclease-R
MPSPLSADALAIRSLIEGFIAERRDIKLEKLSPDDERYSKIVEQFEREAWLEDAARRVCQLQVVTHVLKGIHPDAKGTNLFVRPEELPTTNALGSHASQGQLSDVTGNAAALDVYKFLKLEHQGRSLLDRLSCQCPDTLAALSDSAVIAKEWAASFAAITVAKGTPASHVCAKQMYWLKGLDATCNDDYVLLAPLFPSSLVHDAFQKIQHDRFSEEAKEARKAYKAGKPSDNEVHRYPEMAIRKLGGTKPQNISQLNSERGGSNILLSGLPPQWNASHIRPILNTRSAFGQLRQQRGFYRPLNELRKFLHSDPIANIATRRKVRRLIERAMDSVIDFTMKMHELPPGWSAINTLLEDGTTQRCDLHKHEKHWLDPFRAATDAAFRHERQHTHWQEELRRDIAREINRVLNRGSNSLGASDTEIQEWRHRALQHTSLRSMDSINADYMCELDKQLEETIAFLGDEEEGLA
>AP018933.1|BBG29755.1|1059422_1060328_-|superoxide-dismutase
MTAFIGLMHALERQCAQDGIALCFHGIGVVCHEAKPQTSRSSFGQHSFLLTRNPLKNDGKTAAIVEEGRMHVELSLVLMLSGNASEGTQEERMALAKQLDDYVHRMRIAGGSVLPRENIRSENLRRPHHHQVPHIEPLALEDDAQYTKQLNRLKRRLLPGFALILREDALAQHKNALQEAQPDASLLDAWLDLSRFNYRYDADAAEKQHWPLVRRPSGWLVPIPIGYCALSDEIPANAIANARDPYTPLRFVEPLLSIGEWRSPHRLQCIEEMLWRIKPNSDERLFLLEMLVQAPVDGDVI
>AP018933.1|BBG29754.1|1058347_1059367_-|ABC-type-Fe3+-hydroxamate-transport-system
MSDLKTASVLAFERKLDPSDALLFAGSWDNRDQEHWQPIAVREKSVRGTISNRLKAKDSDPAKLDAQVQNPNLQTIDVATLPHSADTLRARFTLRVLGEFGRPSACNSAAYQARLQEVTEHYINTFGFSTLAQRYANNLANARFLWRNRMAAEQIEVRVRVLNKGEQEALFSFDALSYSLREFKEDEQINALAVLIADALAGKRHLLLEITAFARMGAGQEVFPSQELILDRESHKSRTLYCLDNVAGIHSQKVGNALRTIDTWYPQPENARDYGPIAIEPYGSITTQGVALRQPKKKPKLDFYNLFDNWLLKNEVPDEEQQHYVMAILIRGGVFGEAG
>AP018933.1|BBG29753.1|1053749_1055906_+|arginine/lysine/ornithinede-carboxylases
MKPLKIAANATVACRLITDRPIVALGQTDFTDVGAVVLTRQELDTGILSVLQRTGFGVPAFIVRDEHDASDALPEGCAWLALDEPAHSDKLEQSIKHYRRHLLPPFFDTLSRYVGLGNSSFACPGHQGGRFFLRHPAGRLFHDFYGEHLFRSDICNADVRLGDLLIHEGAALEAQQYAAKVFNADQTFFVLNGTSAANKVVTNALLAPGDLVLFDRNNHKSVHHGALIQAGATPIYLETARNPYGFIGGIDDKALNEANLRGKIRSVAPGRETSARPFRLAVIQLATYDGTLYNAQQIVRRIGHLCDYILFDSAWAGYEQFIDILSDCSPLLLTLTPDDPGIIVTQSVHKQLAGFSQASQIHKKDAHIKGQVRYCNHRQFNNAFMLHASTSPFYPIFAALEVNARIHDGGAGTPLWHECMRLGIDIRKALRTRCTQIRPFIPDAIDGRPWESYPTEQIVHDGRFFACAAKAKWHAFEGYGDRQYLIDPCKLLLTTPGVDAATGQYADFGVPATLLAHYLRVQGIIPEKSDLYSILFLLTPAEDAAKMQHLVEVLVSFERHLEADSPLSEVLPHLYERYRERYCGYTLRQLCQEMHDINVRHDMKALQKAMFRAESMPEVVMLPQQANHALVRGDVELLPLAAVRGRVAAEGALPYPPGILCVVPGEAWSDAAWTYFMALEQLVKTLPGFAPELQGVKIMQSATDDTSQLMAYVVRESA
>AP018933.1|BBG29752.1|1053211_1053340_+|hypothetical-protein
MLDERVKQTHIDLAQFCAQCMLYFIRNEMKASAKRGKSEFFL
>AP018933.1|BBG29751.1|1052923_1053346_-|uncharacterized-conserved-protein
MWLQKELRLSPFRRGFHLITDEIEHALSAELRQINVGLLHAFIKHTSASLTINENADPTVRVDFESFFNHAVPENEPYYRHTYEGSDDMPAHLKSSLLGPSVQIPVSAGRLNLGTWQGIYLCEHRNHGGRRTLVLTLQGE
>AP018933.1|BBG29750.1|1052188_1052881_+|ATPase
MPWQLPLGVGIHDDATFASFLPGDNAGAIAALKLQLQRADEPLVYLWGNEETGRSHLLQAACHDASDQGMRSLYVPLQQLGHFPPLMLEDTEHLDLLALDDIDVVMGRKRWEEGLFHCFNRMRDAGKRMVVSAPCAPRQLDVKLPDLASRLGWGMTFHLSPPTDEQRRDALILRAAMRGMQLPHEVARYILHRGPRRLSELFEVLDRLDMASLSAKRKLTIPFVREALEW
>AP018933.1|BBG29749.1|1051170_1051887_-|phosphoribosylglycinamide-formyltransferase
MDDKTDSGFTPEQVPPRRIVALLSGEGNRLEALIEAQSHDELGGELVAVIADRTDTAGTEKAHAAGIDVAILPRDEYDTPTAYDGALIKTIERHAPDLVVLDGFWHIFSPIFTSRFNGRLLNCHPSLLPALVGRHTHQRALDEGLQEHGASVHFVIEGLNTGPLIIQAVAKVASDDTAETLAEKVLAREELIYPIAIRWFLEGRLKLGAQGAELDGILLPPTGLRLSNEDAEEELNGE
>AP018933.1|BBG29759.1|1068734_1069322_+|adenine/guanine-phosphoribosyltransferases
MTSTLADTSSQQNGTSVYGDYIKSVIRTVRDWPNPGVNFRDITPLLQNSAAFRKLIDSFVHRYQELNIDAIAAIDARGFIIGAPLAYEMGCSFVPVRKKGKLPFKTISETYKLEYGEATVELNSDAFKKGDRIVVVDDLIATGGTMLAAAKLIERTGGEVVETAAIIDLPELGGSRHIREAGHNVFAVCSFTESE
>AP018933.1|BBG29760.1|1069330_1069792_+|xanthine-guanine-phosphoribosyltransferase
MASSERYQRYFKVSWDRLQNDIRELCKDLEGRTFKGIIAIARGGLIPTGLFAQEMGLRNIDTLCVQSYDAMSQREGVTVDKGVDHDGEGWLLIDDLVDTGKTARIVRELLPKALFITVYAKPEGRPLVDRFHTEVSQDTWVVFPWEPNPPADA
>AP018933.1|BBG29761.1|1069842_1070547_+|uracil-DNA-glycosylase
MTTSVLPDDWNAELGQEFEAPYMQKLKAFLRTRKDAHRVIYPHSSNWFRAFQLTPLEQVKVVILGQDPYHGPGQAHGLCFSVRPGVATPPSLVNIYKELATDDVPFQPVNHGFLESWAQQGIMMLNSVLTVEQGQAGSHRNQGWETFTDRAIEVINRRCPHVVFLLWGSYAQKKAAFVDRQRHLVLHAPHPSPLAAHRGFFGCRHFSQANQFLVAKGMAPIEWQLPSHVEPMAH
>AP018933.1|BBG29762.1|1070652_1071282_+|uracil-phosphoribosyltransferase
MAVYAIDHPLVKHKVGLMRSANLSTKLFRELASEVAELLTYEATRGLELEKRTIEGWSGEPLLVDKIKGKKVTIVPILRAGIGMMDGVTNLIPSARISVVGLYRNEETLEPVPYFEKFVSQLDERLALIIDPMLATGGSVIATIDMLKKHKCREIKVIVLVAAPEGIKRVQDAHPDVDIYAASVDDGLNEHGYIVPGLGDAGDKLFGTR
>AP018933.1|BBG29763.1|1071605_1073375_+|gamma-glutamyltransferase
MKLAHTLAFSSFLLGTLPAVSPSVMAATLPAVEARHAMVVSAQALAAQVGADILKQGGNAIDAAVAVGYAEAVVNPCCGNIGGGGFMTLHLADGRDLFVDFRETAPAAASANMYLTPEGNVRKGESMYGYRAVGVPGTVKGLTLVHRQFGRLTRQQVMAPAIKLAREGFVLTRADTDIMDAKVDLFRKDTETARIFLRPDGSAWQPGDRFVQRDLAHTLQAISAKGDEAFYQGRIPAAIAAASRQHGGLLTESDFARYEAKMRTPLSCDYRGYKVISAPPPSSGGVTLCETLNIMEGYDLTKSGFNSAATLHVMTEALRRAYADRNTYLGDPDFIDNPVSHLLDKHYAATLRASITDRATPSADIRPPADLPERPETTHYSVMDEAGNAVSTTFTINGRFGSGIIAPGTGFLLNDEMDDFTVKVGEQNSYGLVQGDRNAIAPNKRPLSSMAPTIVTYKGQVYMVIGTPGGSRIITTVLQTISNVIDHHMSLQEAVDAPRIHHQWWPDRIFYETRGLSADTQAALKAQGYTLQEQTPWSGVAAIMKGLPDISEQSVESSGNDGVLSGKVRAGYVYGSNDARRPAGAAKGF
>AP018933.1|BBG29764.1|1073536_1075240_-|beta-lactamase-like-protein
MLPEPAESGILEHPLPIDSTMNRPQVQIRPRQRPPLDILFLGGCGEIGMNLTLYGHASSWVAIDCGMALRKDLPGTPVQMPDIAPLVKEGITPDALVITHGHEDHIGAITWLWPHWGCAIWATPLVAAMLRYRFSERGLSTHAIKTFQPGEAFEAGEFTLRSLPVTHSIPESCALLLTTPAHRVLHTGDWKIDPAPLLGPASSEEVFRALAPISLVVGDSTNAMEPGHSISEAVVAETLKNTIAQCKGRVVVSCFASNLARIHAAAQAAQACGRRIAIAGRAMQRMIQIARVLGYLTDFPTPVPMKDVGYLPKEEVLVLATGSQGEPQAAVARMAQQRHRDLDLEPGDSVIFSSKIIPGNEEAIGAVCKALRLRDINVLDEQHIPTLHASGHPAQDELRTFYTWVEPQHLLPVHGTLEHQQAHLTLANAMGIQGEHCPVDGEWLQWNGQQIQLHKTLTLTPRLMEQQQAQRQGVRRRTRHALTVIVPLRSDLNGWQRVGRTVIDPPPGIELDEDGVLDWLDDRLADATERDIDDLRHRLLHALKHWLFDNGMAVGFVHLDLFDVTHA
>AP018933.1|BBG29765.1|1075272_1076232_-|dehydrogenases-with-different-specificities
MLAKYNRTITVQQYAVFEMPMQTARQHAAFDIAPQTDKIIRQAGMRYTLNILFDDGTRIQHFRNVVAGSSDQFDTTIIGLVIGTRTHKGRQEAMMNIDDSATIALAQHRRQNLHVTRQHQCIAVVAVDQFSNLVESRLLVVFVHCHVMEGNIMPFRHSAQVVVVGNDGHDIARQFTCRILVQQIDQAVRHLGNHHDNARAFGHVMQTPLHTELFGNGGKALTDMLSIALECDFVAHEETVFDDIGVLSRFENGAAVFGNKTRNARNDTHTVRTGNDQAIGMRHDEQGLRNKRDQRSMTLMLCKEQCFYKPLLLATLHKV
>AP018933.1|BBG29766.1|1075383_1076229_+|formyltetrahydrofolate-hydrolase
MSHTYRLIVSCPDRVGIVARVSGFIAEHGGSILEAAQHSDVIENRFFMRYEIAFECDAEHIRQGFAPIAEEFGMKWRLHDVAERPRVVVMVSKMAHCLVDLLYQNATGELPGDIVAVISNHDDLRGMTEWHNIPFHHVAVDKDNKQPAFDKVAELVDSYNCDTLVLARYMQILPPVLCERYRGRVINIHHSFLPSFVGARPYHQAYDRGVKLIGATCHYVTEVLDAGPIIEQDIQRVTHTCLPDDLVRLGRDVERRVLTRGLHWHLEDRVLLNGNRTVVFS
>AP018933.1|BBG29767.1|1076846_1077905_-|nucleotidyltransferase/DNA-polymerase
MRKILHVDCDCFYAAVEMRDNPSLANVPIAIGGQADQRGVIATSNYVARRYGVRSAMPTAHALRLCPQLKVIRPDFPRYRAVSRQIQAIFHELTDIVEPLSLDEAYLDISDVERFKGSGTWMAQWLKHTIKARTGITVSVGVAPNRFLAKIASDWRKPDGLFVLTPSECDDFIAALDVRYLPGVGPSTRGRLEDMGITTCLQLRDVPLSILLDRFGRFGQRLYELARGVDERPVESVHVRKSISVETTYPQDIIGQDDCWQALQLLITRLQERVAHHGSPRLRKLFVKIRFDDFTHTTMETLDHQMTDSRFRELFEQAWQRRSRPVRLLGVGVRLAEQDDPHQLSLFPTGGA
>AP018933.1|BBG29768.1|1078424_1078799_+|predicted-ATP-dependent-protease
MSLLTDYTLKQQQIEQLKTELQKLEQDERLKNEIEFKNRLEALMKDYGKSARDVIATLDPRGEVANREATKGGKAAGTRRKRKLKVYSNPHNGEVIETRGGNHKQLKEWKEQYGSDVVESWLQS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
AP018933_1	1.1\|585377\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585377-585408	32	AP018933.1	2893488-2893519	0	1.0
AP018933_1	1.2\|585437\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585437-585468	32	AP018933.1	2888769-2888800	0	1.0
AP018933_1	1.3\|585497\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585497-585528	32	AP018933.1	995658-995689	0	1.0
AP018933_1	1.4\|585557\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585557-585588	32	AP018933.1	2879859-2879890	0	1.0
AP018933_2	2.7\|1056375\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056375-1056406	32	AP018933.1	2893189-2893220	0	1.0
AP018933_2	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	AP018933.1	2879937-2879968	0	1.0
AP018933_2	2.25\|1057456\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057456-1057487	32	AP018933.1	1000819-1000850	0	1.0
AP018933_2	2.26\|1057516\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057516-1057547	32	AP018933.1	2878387-2878418	0	1.0
AP018933_2	2.27\|1057576\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057576-1057607	32	AP018933.1	2873988-2874019	0	1.0
AP018933_3	3.1\|1066600\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066600-1066631	32	AP018933.1	1052096-1052127	0	1.0
AP018933_3	3.2\|1066660\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066660-1066691	32	AP018933.1	1052159-1052190	0	1.0
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	AP018933.1	2868333-2868364	1	0.969
AP018933_2	2.24\|1057396\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057396-1057427	32	AP018933.1	2874516-2874547	1	0.969
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	AP018933.1	2874881-2874912	1	0.969
AP018933_3	3.19\|1067621\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067621-1067652	32	AP018933.1	2869644-2869675	1	0.969

1. spacer 1.1|585377|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2893488-2893519, mismatch: 0, identity: 1.0

aagtgggtgagctgtgctgtcgtgcccatgaa	CRISPR spacer
aagtgggtgagctgtgctgtcgtgcccatgaa	Protospacer
********************************

2. spacer 1.2|585437|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2888769-2888800, mismatch: 0, identity: 1.0

ggcaaattctaagccagcagagcacttagaat	CRISPR spacer
ggcaaattctaagccagcagagcacttagaat	Protospacer
********************************

3. spacer 1.3|585497|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 995658-995689, mismatch: 0, identity: 1.0

gacacactgtcggaaggactaaggcgactggc	CRISPR spacer
gacacactgtcggaaggactaaggcgactggc	Protospacer
********************************

4. spacer 1.4|585557|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2879859-2879890, mismatch: 0, identity: 1.0

atgccgccaccgcgccattcttcggttttacg	CRISPR spacer
atgccgccaccgcgccattcttcggttttacg	Protospacer
********************************

5. spacer 2.7|1056375|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2893189-2893220, mismatch: 0, identity: 1.0

ccgtatcgagggcaacgcagcaggcaaccgct	CRISPR spacer
ccgtatcgagggcaacgcagcaggcaaccgct	Protospacer
********************************

6. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2879937-2879968, mismatch: 0, identity: 1.0

gcggcctccatcagcccgccacagctcactgt	CRISPR spacer
gcggcctccatcagcccgccacagctcactgt	Protospacer
********************************

7. spacer 2.25|1057456|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 1000819-1000850, mismatch: 0, identity: 1.0

agcgaatcgaagcgatcgggtgtcgaagtagt	CRISPR spacer
agcgaatcgaagcgatcgggtgtcgaagtagt	Protospacer
********************************

8. spacer 2.26|1057516|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2878387-2878418, mismatch: 0, identity: 1.0

aagtacacggtgggaggtggtaagggttcaga	CRISPR spacer
aagtacacggtgggaggtggtaagggttcaga	Protospacer
********************************

9. spacer 2.27|1057576|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2873988-2874019, mismatch: 0, identity: 1.0

tcggtcatgtcgatgagtaaagcctcgggcaa	CRISPR spacer
tcggtcatgtcgatgagtaaagcctcgggcaa	Protospacer
********************************

10. spacer 3.1|1066600|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 1052096-1052127, mismatch: 0, identity: 1.0

tgcctgtcactccgtccctggtgtgctcgtat	CRISPR spacer
tgcctgtcactccgtccctggtgtgctcgtat	Protospacer
********************************

11. spacer 3.2|1066660|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 1052159-1052190, mismatch: 0, identity: 1.0

tttaaggggaaacaggtttcaggagaagcaat	CRISPR spacer
tttaaggggaaacaggtttcaggagaagcaat	Protospacer
********************************

12. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2868333-2868364, mismatch: 1, identity: 0.969

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
atcagtgacgcgaccgcttcctcgaccagaat	Protospacer
**.*****************************

13. spacer 2.24|1057396|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2874516-2874547, mismatch: 1, identity: 0.969

gcgaactgctgctgcgacagcacagcaatgag	CRISPR spacer
gcgaactgctgctgcgacagcacagcaacgag	Protospacer
****************************.***

14. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to position: 2874881-2874912, mismatch: 1, identity: 0.969

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
gtgacgcgatccgcgcagggaatgacgtcctc	Protospacer
*****************************.**

15. spacer 3.19|1067621|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to position: 2869644-2869675, mismatch: 1, identity: 0.969

agcggccaagcccgtggacaaggacgacagcc	CRISPR spacer
agcggccaagcccgtggacaaggacgatagcc	Protospacer
***************************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065677	UNVERIFIED: Campylobacter phage A13b, complete genome	34680-34711	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MT884010	Escherichia phage vb_EcoM_bov22_2, complete genome	34577-34608	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065682	UNVERIFIED: Campylobacter phage A112b, complete genome	23544-23575	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LR694610	Escherichia phage rV5_ev168 genome assembly, chromosome: 1	2551-2582	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MT884008	Escherichia phage vb_EcoM_bov10K2, complete genome	34577-34608	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LN881735	Escherichia phage slur12, complete genome	105163-105194	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	KP869112	Escherichia coli O157 typing phage 14, partial genome	120226-120257	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MT884009	Escherichia phage vb_EcoM_bov11CS3, complete genome	34577-34608	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065659	UNVERIFIED: Campylobacter phage C5, complete genome	67339-67370	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MK962749	Shigella phage CM1, complete genome	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LR597647	Escherichia phage rV5_ev147 genome assembly, chromosome: 1	2633-2664	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065661	UNVERIFIED: Campylobacter phage C9, complete genome	82065-82096	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850630	Escherichia phage naam, complete genome	66061-66092	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850597	Escherichia phage isim, complete genome	36097-36128	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065655	UNVERIFIED: Campylobacter phage C2, complete genome	117235-117266	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850578	Escherichia phage nomo, complete genome	20215-20246	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850593	Escherichia phage inoa, complete genome	106327-106358	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850646	Escherichia phage nom, complete genome	1534-1565	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850626	Escherichia phage nimi, complete genome	70202-70233	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065644	UNVERIFIED: Campylobacter phage A147, complete genome	25575-25606	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MT884011	Escherichia phage vb_EcoM_bov25_3, complete genome	34577-34608	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850612	Escherichia phage magaca, complete genome	103278-103309	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LR699804	Escherichia phage rV5_ev146 genome assembly, chromosome: 1	3800-3831	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065647	UNVERIFIED: Campylobacter phage D#, complete genome	84750-84781	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	NC_011041	Escherichia coli bacteriophage rv5, complete sequence	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065646	UNVERIFIED: Campylobacter phage D1, complete genome	128227-128258	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG022439	Phage 203, complete genome	2574-2605	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	KR698074	Escherichia phage APCEc02, complete genome	135277-135308	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MT682716	Escherichia phage vB_EcoM_Gotham, complete genome	33456-33487	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	NC_022323	Escherichia phage 2 JES-2013, complete genome	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065635	UNVERIFIED: Campylobacter phage C12, complete genome	35589-35620	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MH752840	Escherichia phage vB_EcoM-Pr121LW, complete genome	101428-101459	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065674	UNVERIFIED: Campylobacter phage A140, complete genome	11555-11586	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065666	UNVERIFIED: Campylobacter phage A12a, complete genome	112623-112654	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MH491969	Escherichia phage LL12, complete genome	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	KP869103	Escherichia coli O157 typing phage 5, complete genome	27424-27455	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MK373780	Escherichia phage vB_EcoM_HdK5, complete genome	34700-34731	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065662	UNVERIFIED: Campylobacter phage A142, complete genome	52671-52702	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LR694611	Escherichia phage rV5_ev158 genome assembly, chromosome: 1	2597-2628	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MK327930	Escherichia phage EdH4, complete genome	33970-34001	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	LR694165	Escherichia phage rV5_ev156 genome assembly, chromosome: 1	2633-2664	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	NC_041937	Escherichia phage V18, complete genome	2642-2673	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG963916	Escherichia phage PDX, complete genome	19718-19749	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065658	UNVERIFIED: Campylobacter phage C7, complete genome	13047-13078	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	NC_028248	Escherichia phage slur16, complete genome	36577-36608	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	KJ190158	Escherichia phage vB_EcoM_FFH2, complete genome	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065672	UNVERIFIED: Campylobacter phage A141, complete genome	63838-63869	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065654	UNVERIFIED: Campylobacter phage C15, complete genome	112650-112681	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850642	Escherichia phage navn, complete genome	120478-120509	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG065690	UNVERIFIED: Campylobacter phage A135, complete genome	54601-54632	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	KT001917	Escherichia phage Murica, complete genome	2573-2604	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850627	Escherichia phage pangalan, complete genome	817-848	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850649	Escherichia phage nomine, complete genome	57669-57700	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MG022440	Phage 206, complete genome	2574-2605	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850595	Escherichia phage naswa, complete genome	74732-74763	6	0.812
AP018933_1	1.17\|586337\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586337-586368	32	MN850576	Escherichia phage ime, complete genome	83400-83431	6	0.812
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	HM029250	Lactococcus phage 949, complete genome	3716-3748	6	0.818
AP018933_1	1.4\|585557\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585557-585588	32	MN694763	Marine virus AFVG_250M1123, complete genome	25919-25950	7	0.781
AP018933_1	1.6\|585677\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585677-585708	32	L31578	Butyrivibrio fibrisolvens plasmid pRJF2, complete sequence	819-850	7	0.781
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	22518-22549	7	0.781
AP018933_2	2.4\|1056195\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056195-1056226	32	HQ683709	Planktothrix phage PaV-LD, complete genome	65881-65912	7	0.781
AP018933_2	2.21\|1057216\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057216-1057247	32	NZ_CP049245	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence	84623-84654	7	0.781
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	KF926093	Lactococcus phage phiL47, complete genome	3715-3747	7	0.788
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	MF417868	Uncultured Caudovirales phage clone 7AX_1, partial genome	57776-57808	7	0.788
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	90780-90812	7	0.788
AP018933_3	3.15\|1067381\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067381-1067412	32	NZ_CP034473	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence	56002-56033	7	0.781
AP018933_3	3.15\|1067381\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067381-1067412	32	NZ_CP034478	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence	17311-17342	7	0.781
AP018933_3	3.19\|1067621\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067621-1067652	32	NZ_LR134470	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence	31341-31372	7	0.781
AP018933_1	1.1\|585377\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585377-585408	32	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	198572-198603	8	0.75
AP018933_1	1.1\|585377\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585377-585408	32	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	198574-198605	8	0.75
AP018933_1	1.2\|585437\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585437-585468	32	MN586021	Arthrobacter phage Beagle, complete genome	48786-48817	8	0.75
AP018933_1	1.2\|585437\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585437-585468	32	MT889394	Arthrobacter phage Odyssey395, complete genome	49023-49054	8	0.75
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	MN694214	Marine virus AFVG_250M996, complete genome	14113-14144	8	0.75
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	MN693828	Marine virus AFVG_250M104, complete genome	21680-21711	8	0.75
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	272072-272103	8	0.75
AP018933_1	1.7\|585737\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585737-585768	32	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	567913-567944	8	0.75
AP018933_1	1.7\|585737\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585737-585768	32	NZ_CP049320	Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence	120067-120098	8	0.75
AP018933_1	1.13\|586097\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586097-586128	32	NC_048021	Gordonia phage Daredevil, complete genome	22533-22564	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	54188-54219	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	142460-142491	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	28218-28249	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NZ_CP017108	Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence	276158-276189	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NZ_CP017109	Lactobacillus salivarius strain CICC23174 plasmid pLS_2 sequence	28697-28728	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	55354-55385	8	0.75
AP018933_1	1.18\|586397\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586397-586428	32	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	142688-142719	8	0.75
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP042262	Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence	231164-231195	8	0.75
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP015032	Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence	218300-218331	8	0.75
AP018933_2	2.12\|1056675\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056675-1056706	32	NZ_CP014127	Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence	404400-404431	8	0.75
AP018933_2	2.12\|1056675\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056675-1056706	32	NZ_CP028350	Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence	368502-368533	8	0.75
AP018933_2	2.12\|1056675\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056675-1056706	32	NC_014258	Pantoea vagans C9-1 plasmid pPag3, complete sequence	203432-203463	8	0.75
AP018933_2	2.12\|1056675\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056675-1056706	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	335533-335564	8	0.75
AP018933_2	2.21\|1057216\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057216-1057247	32	NZ_CP029339	Streptomyces sp. SM17 plasmid pSM17A, complete sequence	28948-28979	8	0.75
AP018933_2	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	79061-79092	8	0.75
AP018933_2	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	80224-80255	8	0.75
AP018933_2	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	79071-79102	8	0.75
AP018933_2	2.26\|1057516\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057516-1057547	32	MK934841	Pseudomonas phage UMP151, complete genome	39346-39377	8	0.75
AP018933_2	2.26\|1057516\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057516-1057547	32	KM389238	UNVERIFIED: Pseudomonas phage F_HA1208sp/Pa1651 clone contig00002 genomic sequence	145-176	8	0.75
AP018933_3	3.4\|1066781\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066781-1066812	32	NZ_AP014822	Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence	28763-28794	8	0.75
AP018933_3	3.6\|1066901\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066901-1066932	32	MN694122	Marine virus AFVG_250M535, complete genome	19954-19985	8	0.75
AP018933_3	3.6\|1066901\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066901-1066932	32	MN871444	UNVERIFIED: Serratia phage KpGz_1, complete genome	167970-168001	8	0.75
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	NZ_CP032314	Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence	9801-9832	8	0.75
AP018933_3	3.11\|1067201\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067201-1067232	32	NC_015146	Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, complete sequence	50148-50179	8	0.75
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	NZ_CP045375	Sulfitobacter sp. THAF37 plasmid pTHAF37_c, complete sequence	56420-56451	9	0.719
AP018933_1	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	NZ_CP037914	Sphingomonas sp. AAP5 plasmid p213, complete sequence	36859-36890	9	0.719
AP018933_1	1.9\|585857\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585857-585888	32	MN694313	Marine virus AFVG_250M1015, complete genome	20587-20618	9	0.719
AP018933_1	1.10\|585917\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585917-585948	32	NZ_CP053290	Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence	123896-123927	9	0.719
AP018933_1	1.11\|585977\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585977-586008	32	MK088078	Marinobacter phage AS1, complete genome	32836-32867	9	0.719
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP035418	Leisingera sp. NJS204 plasmid unnamed1, complete sequence	52898-52929	9	0.719
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP038237	Leisingera sp. NJS201 plasmid unnamed3, complete sequence	82677-82708	9	0.719
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1816101-1816132	9	0.719
AP018933_2	2.2\|1056075\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056075-1056106	32	MN062720	Microbacterium phage FuzzBuster, complete genome	33811-33842	9	0.719
AP018933_2	2.6\|1056315\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056315-1056346	32	HQ615693	Synechococcus phage S-CRM01, complete genome	153171-153202	9	0.719
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	159093-159124	9	0.719
AP018933_2	2.16\|1056916\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056916-1056947	32	NZ_CP015032	Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence	218585-218616	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	KX550443	Mycobacterium phage Magnito, complete genome	44396-44427	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	MK112532	Mycobacterium phage Bones, complete genome	45151-45182	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	NC_028941	Mycobacterium phage Turj99, complete genome	45007-45038	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	EU744249	Mycobacterium phage Lockley, complete genome	44439-44470	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	MH697575	Mycobacterium phage Adahisdi, complete genome	44992-45023	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	EU744252	Mycobacterium phage DD5, complete genome	45277-45308	9	0.719
AP018933_2	2.17\|1056976\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056976-1057007	32	KF024724	Mycobacterium phage Trouble, complete genome	45205-45236	9	0.719
AP018933_2	2.18\|1057036\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057036-1057067	32	NZ_CP043525	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_01, complete sequence	1318-1349	9	0.719
AP018933_2	2.18\|1057036\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057036-1057067	32	NC_007191	Lactococcus lactis cremoris 712 plasmid pAG6, complete sequence	3371-3402	9	0.719
AP018933_2	2.18\|1057036\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057036-1057067	32	NZ_CP016739	Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence	12513-12544	9	0.719
AP018933_2	2.18\|1057036\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057036-1057067	32	NC_017498	Lactococcus lactis plasmid pSK11A, complete sequence	667-698	9	0.719
AP018933_2	2.18\|1057036\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057036-1057067	32	NC_008504	Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence	7323-7354	9	0.719
AP018933_2	2.21\|1057216\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057216-1057247	32	CP054928	Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence	50153-50184	9	0.719
AP018933_2	2.22\|1057276\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057276-1057307	32	NC_012527	Deinococcus deserti VCD115 plasmid 1, complete sequence	276648-276679	9	0.719
AP018933_2	2.22\|1057276\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057276-1057307	32	NZ_CP006570	Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence	209547-209578	9	0.719
AP018933_2	2.24\|1057396\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057396-1057427	32	CP000618	Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence	37497-37528	9	0.719
AP018933_2	2.27\|1057576\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057576-1057607	32	LR745207	uncultured phage genome assembly, chromosome: 1	285934-285965	9	0.719
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	KX229736	Campylobacter phage PC5, complete genome	50280-50312	9	0.727
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	MH321490	Staphylococcus phage Quidividi, complete genome	126767-126799	9	0.727
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	MH321491	Staphylococcus phage Twillingate, complete genome	126734-126766	9	0.727
AP018933_3	3.15\|1067381\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067381-1067412	32	NZ_AP014580	Burkholderia sp. RPE67 plasmid p2, complete sequence	185772-185803	9	0.719
AP018933_1	1.7\|585737\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585737-585768	32	NC_016592	Burkholderia sp. YI23 plasmid byi_3p, complete sequence	57069-57100	10	0.688
AP018933_1	1.8\|585797\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585797-585828	32	NZ_CP033971	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence	129051-129082	10	0.688
AP018933_1	1.10\|585917\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585917-585948	32	MT820023	Cryophage ML09, complete genome	12552-12583	10	0.688
AP018933_1	1.15\|586217\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586217-586248	32	MN694805	Marine virus AFVG_250M201, complete genome	1935-1966	10	0.688
AP018933_1	1.21\|586577\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	586577-586608	32	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	270561-270592	10	0.688
AP018933_1	1.22\|586637\|32\|AP018933\|CRISPRCasFinder,CRT	586637-586668	32	NZ_CP035512	Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence	228203-228234	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1070079-1070110	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1597719-1597750	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	476052-476083	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	175596-175627	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	228570-228601	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1245194-1245225	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1839260-1839291	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1970956-1970987	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1070853-1070884	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1604862-1604893	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1599680-1599711	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1441011-1441042	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1553081-1553112	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1599161-1599192	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	345592-345623	10	0.688
AP018933_2	2.8\|1056435\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056435-1056466	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	345592-345623	10	0.688
AP018933_2	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	784006-784037	10	0.688
AP018933_2	2.24\|1057396\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057396-1057427	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	120081-120112	10	0.688
AP018933_3	3.3\|1066720\|33\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066720-1066752	33	JX569801	Campylobacter phage CP30A, complete genome	96848-96880	10	0.697
AP018933_3	3.9\|1067081\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067081-1067112	32	NC_019522	Pectobacterium phage ZF40, complete genome	9731-9762	10	0.688
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	KX961385	Bordetella virus LK3, complete genome	26524-26555	10	0.688
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	KY000220	Bordetella phage FP1, complete genome	1849-1880	10	0.688
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	KY000221	Bordetella phage CN1, complete genome	1911-1942	10	0.688
AP018933_3	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	NC_047877	Bordetella phage CN2, complete genome	1926-1957	10	0.688
AP018933_3	3.20\|1067681\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067681-1067712	32	NZ_CP044180	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-3, complete sequence	18640-18671	10	0.688
AP018933_3	3.20\|1067681\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067681-1067712	32	NZ_CP030187	Salmonella enterica strain SA20094620 plasmid pSA20094620.2, complete sequence	78313-78344	10	0.688
AP018933_3	3.20\|1067681\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067681-1067712	32	NZ_CP051133	Enterobacter hormaechei strain AMS-38 plasmid pAMS-38a, complete sequence	50442-50473	10	0.688
AP018933_2	2.21\|1057216\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057216-1057247	32	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	97072-97103	11	0.656
AP018933_3	3.2\|1066660\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1066660-1066691	32	NC_012527	Deinococcus deserti VCD115 plasmid 1, complete sequence	78762-78793	11	0.656

1. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065677 (UNVERIFIED: Campylobacter phage A13b, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

2. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT884010 (Escherichia phage vb_EcoM_bov22_2, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

3. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065682 (UNVERIFIED: Campylobacter phage A112b, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

4. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR694610 (Escherichia phage rV5_ev168 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

5. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT884008 (Escherichia phage vb_EcoM_bov10K2, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

6. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LN881735 (Escherichia phage slur12, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

7. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KP869112 (Escherichia coli O157 typing phage 14, partial genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

8. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT884009 (Escherichia phage vb_EcoM_bov11CS3, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

9. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065659 (UNVERIFIED: Campylobacter phage C5, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

10. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK962749 (Shigella phage CM1, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

11. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR597647 (Escherichia phage rV5_ev147 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

12. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065661 (UNVERIFIED: Campylobacter phage C9, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

13. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850630 (Escherichia phage naam, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

14. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850597 (Escherichia phage isim, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

15. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065655 (UNVERIFIED: Campylobacter phage C2, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

16. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850578 (Escherichia phage nomo, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

17. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850593 (Escherichia phage inoa, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

18. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850646 (Escherichia phage nom, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

19. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850626 (Escherichia phage nimi, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

20. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065644 (UNVERIFIED: Campylobacter phage A147, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

21. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT884011 (Escherichia phage vb_EcoM_bov25_3, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

22. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850612 (Escherichia phage magaca, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

23. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR699804 (Escherichia phage rV5_ev146 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

24. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065647 (UNVERIFIED: Campylobacter phage D#, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

25. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_011041 (Escherichia coli bacteriophage rv5, complete sequence) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

26. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065646 (UNVERIFIED: Campylobacter phage D1, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

27. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG022439 (Phage 203, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

28. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KR698074 (Escherichia phage APCEc02, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

29. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT682716 (Escherichia phage vB_EcoM_Gotham, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

30. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_022323 (Escherichia phage 2 JES-2013, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

31. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065635 (UNVERIFIED: Campylobacter phage C12, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

32. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MH752840 (Escherichia phage vB_EcoM-Pr121LW, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

33. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065674 (UNVERIFIED: Campylobacter phage A140, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

34. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065666 (UNVERIFIED: Campylobacter phage A12a, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

35. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MH491969 (Escherichia phage LL12, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

36. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KP869103 (Escherichia coli O157 typing phage 5, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

37. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK373780 (Escherichia phage vB_EcoM_HdK5, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

38. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065662 (UNVERIFIED: Campylobacter phage A142, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

39. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR694611 (Escherichia phage rV5_ev158 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

40. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK327930 (Escherichia phage EdH4, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

41. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR694165 (Escherichia phage rV5_ev156 genome assembly, chromosome: 1) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

42. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_041937 (Escherichia phage V18, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

43. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG963916 (Escherichia phage PDX, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

44. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065658 (UNVERIFIED: Campylobacter phage C7, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

45. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_028248 (Escherichia phage slur16, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

46. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KJ190158 (Escherichia phage vB_EcoM_FFH2, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

47. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065672 (UNVERIFIED: Campylobacter phage A141, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

48. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065654 (UNVERIFIED: Campylobacter phage C15, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

49. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850642 (Escherichia phage navn, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

50. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG065690 (UNVERIFIED: Campylobacter phage A135, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

51. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KT001917 (Escherichia phage Murica, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

52. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850627 (Escherichia phage pangalan, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

53. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850649 (Escherichia phage nomine, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

54. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MG022440 (Phage 206, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

55. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850595 (Escherichia phage naswa, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

56. spacer 1.17|586337|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN850576 (Escherichia phage ime, complete genome) position: , mismatch: 6, identity: 0.812

tctcgcaagtcatgaagattcatgcagtcatg	CRISPR spacer
tctacaaagttatgaagattcatgcactcatc	Protospacer
***   ****.*************** ****

57. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to HM029250 (Lactococcus phage 949, complete genome) position: , mismatch: 6, identity: 0.818

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
cttgaaaaacataacgaattttttgatgaggtt	Protospacer
********** *** ************ *   *

58. spacer 1.4|585557|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN694763 (Marine virus AFVG_250M1123, complete genome) position: , mismatch: 7, identity: 0.781

atgccgcca----ccgcgccattcttcggttttacg	CRISPR spacer
----tgccatgggccgcggcattgttcggttttacg	Protospacer
    .****    ***** **** ************

59. spacer 1.6|585677|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to L31578 (Butyrivibrio fibrisolvens plasmid pRJF2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaatggcttccgtgagcaaatcgtgaccaag	CRISPR spacer
agaacagcttccgagagaaaatcgtgaccatc	Protospacer
*.**..******* *** ************

60. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
ctgctggatctcgtcgcgcagcgcgaagtagc	Protospacer
 ***.**** **************** . **

61. spacer 2.4|1056195|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to HQ683709 (Planktothrix phage PaV-LD, complete genome) position: , mismatch: 7, identity: 0.781

ttgaccttgccctgtagcgtgctgcccatatt-	CRISPR spacer
ttgacctttccctgtagcttgctg-caatgccc	Protospacer
******** ********* ***** * **...

62. spacer 2.21|1057216|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049245 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaacgcgacacccccacagccagcggcgttca	CRISPR spacer
gaacgcgacacccgcacagcctgcggcgacag	Protospacer
.************ ******* ****** . .

63. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 7, identity: 0.788

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
cttgaaaaacataacgaattttttgacgaggtt	Protospacer
********** *** ***********. *   *

64. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MF417868 (Uncultured Caudovirales phage clone 7AX_1, partial genome) position: , mismatch: 7, identity: 0.788

--cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
ggctt--agaacctaaagaaacttttgattattta	Protospacer
  ***  *.*********** .***********

65. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 7, identity: 0.788

--cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
ggctt--agaacctaaagaaacttttgattattta	Protospacer
  ***  *.*********** .***********

66. spacer 3.15|1067381|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034473 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_4, complete sequence) position: , mismatch: 7, identity: 0.781

atcagtgatgccgtagtgataaagctctgcgc	CRISPR spacer
tttcgtattgccgtagtgataaacctctgcgt	Protospacer
 *. **. *************** *******.

67. spacer 3.15|1067381|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034478 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_4, complete sequence) position: , mismatch: 7, identity: 0.781

atcagtgatgccgtagtgataaagctctgcgc	CRISPR spacer
tttcgtattgccgtagtgataaacctctgcgt	Protospacer
 *. **. *************** *******.

68. spacer 3.19|1067621|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 7, identity: 0.781

agcggccaagcccgtggacaaggacgacagcc	CRISPR spacer
actcgccaagcccgtggacaagggcgagtggc	Protospacer
* . *******************.***  * *

69. spacer 1.1|585377|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.75

aagtgggtgagctgtgctgtcgtgcccatgaa	CRISPR spacer
gagaccaggagctgtgctgtcgtgactatgaa	Protospacer
.**   . **************** *.*****

70. spacer 1.1|585377|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.75

aagtgggtgagctgtgctgtcgtgcccatgaa	CRISPR spacer
gagaccaggagctgtgctgtcgtgactatgaa	Protospacer
.**   . **************** *.*****

71. spacer 1.2|585437|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN586021 (Arthrobacter phage Beagle, complete genome) position: , mismatch: 8, identity: 0.75

ggcaaattctaagccagcagagcacttagaat	CRISPR spacer
ggccatttctaagccagcagagcgccacgcag	Protospacer
*** * *****************.*.  * *

72. spacer 1.2|585437|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT889394 (Arthrobacter phage Odyssey395, complete genome) position: , mismatch: 8, identity: 0.75

ggcaaattctaagccagcagagcacttagaat	CRISPR spacer
ggccatttctaagccagcagagcgccacgcag	Protospacer
*** * *****************.*.  * *

73. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN694214 (Marine virus AFVG_250M996, complete genome) position: , mismatch: 8, identity: 0.75

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
gtggccggcgcgaccgcgtcatcgaccagaat	Protospacer
.* . .*.********* ** ***********

74. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN693828 (Marine virus AFVG_250M104, complete genome) position: , mismatch: 8, identity: 0.75

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
gtggccggcgcgaccgcgtcatcgaccagaat	Protospacer
.* . .*.********* ** ***********

75. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
atcaactccgcgtccgcttcctcgagcagaac	Protospacer
**.*..  **** ************ *****.

76. spacer 1.7|585737|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 8, identity: 0.75

atcgggatgcccgcgttgcgctt---ttggaatat	CRISPR spacer
atcgggatgctcacgttgcgcttcgcctggcg---	Protospacer
**********.*.**********   .*** .

77. spacer 1.7|585737|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049320 (Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence) position: , mismatch: 8, identity: 0.75

atcgggatgcccgcgttgcgctt---ttggaatat	CRISPR spacer
atcgggatgctcacgttgcgcttcgcctggcg---	Protospacer
**********.*.**********   .*** .

78. spacer 1.13|586097|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_048021 (Gordonia phage Daredevil, complete genome) position: , mismatch: 8, identity: 0.75

agcctcgaaggctgtacggatagcctcccagt	CRISPR spacer
attcgggaaggctgtacggacagcgtcccaca	Protospacer
* .*  **************.*** *****

79. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

80. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

81. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

82. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

83. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017109 (Lactobacillus salivarius strain CICC23174 plasmid pLS_2 sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

84. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

85. spacer 1.18|586397|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 8, identity: 0.75

aatacccgccagcatagtcattatcgacatat	CRISPR spacer
catgacaatcaccatagtaattatcgacatat	Protospacer
 **. * ..** ****** *************

86. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042262 (Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
aacccggatatcgtcgccccgcgcgagaatgg	Protospacer
*  ************** * ****** *. *.

87. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015032 (Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence) position: , mismatch: 8, identity: 0.75

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
tttcgcttgtgctttcttcttcgcctcctttc	Protospacer
*...* * .******* ******** ******

88. spacer 2.12|1056675|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttacgctcttcagcagcagactgagcggactt	CRISPR spacer
gaacgcttttcagcagcagactgcgcgttttc	Protospacer
  *****.*************** ***  .*.

89. spacer 2.12|1056675|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 8, identity: 0.75

ttacgctcttcagcagcagactgagcggactt	CRISPR spacer
gaacgcttttcagcagcagactgcgcgttttc	Protospacer
  *****.*************** ***  .*.

90. spacer 2.12|1056675|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 8, identity: 0.75

ttacgctcttcagcagcagactgagcggactt	CRISPR spacer
gaacgcttttcagcagcagactgcgcgttttc	Protospacer
  *****.*************** ***  .*.

91. spacer 2.12|1056675|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttacgctcttcagcagcagactgagcggactt	CRISPR spacer
gaacgcttttcagcagcagactgcgcgttttc	Protospacer
  *****.*************** ***  .*.

92. spacer 2.21|1057216|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029339 (Streptomyces sp. SM17 plasmid pSM17A, complete sequence) position: , mismatch: 8, identity: 0.75

aaacgcgacacccccacagccagcggcgttca	CRISPR spacer
caccgcggcaaccccacagccagcggctgact	Protospacer
 * ****.** ****************   *

93. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcctccatcagcccgccaca----gctcactgt	CRISPR spacer
gcggcccgcatcagcccgccacatgcggcgcg----	Protospacer
******. ***************    ** *.

94. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcctccatcagcccgccaca----gctcactgt	CRISPR spacer
gcggcccgcatcagcccgccacatgcggcgcg----	Protospacer
******. ***************    ** *.

95. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 8, identity: 0.75

gcggcctccatcagcccgccaca----gctcactgt	CRISPR spacer
gcggcccgcatcagcccgccacatgcggcgcg----	Protospacer
******. ***************    ** *.

96. spacer 2.26|1057516|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK934841 (Pseudomonas phage UMP151, complete genome) position: , mismatch: 8, identity: 0.75

aagtacacggtgggaggtggtaagggttcaga	CRISPR spacer
cggtacacggtcggaggtggcaaggggagtga	Protospacer
 .********* ********.*****    **

97. spacer 2.26|1057516|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KM389238 (UNVERIFIED: Pseudomonas phage F_HA1208sp/Pa1651 clone contig00002 genomic sequence) position: , mismatch: 8, identity: 0.75

aagtacacggtgggaggtggtaagggttcaga	CRISPR spacer
cggtacacggtcggaggtggcaaggggagtga	Protospacer
 .********* ********.*****    **

98. spacer 3.4|1066781|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014822 (Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence) position: , mismatch: 8, identity: 0.75

---aagcagagaaccaaaaattttctgagcctctt	CRISPR spacer
tctaaac---ctacgaaaaattttctgagactctt	Protospacer
   **.*     ** ************** *****

99. spacer 3.6|1066901|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN694122 (Marine virus AFVG_250M535, complete genome) position: , mismatch: 8, identity: 0.75

tgcaatcttattccatcatttggactcttatt	CRISPR spacer
ttatatctaattccatcatttgaactctgtct	Protospacer
*   **** *************.*****  .*

100. spacer 3.6|1066901|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN871444 (UNVERIFIED: Serratia phage KpGz_1, complete genome) position: , mismatch: 8, identity: 0.75

-tgcaatcttattccatcatttggactcttatt	CRISPR spacer
ccatgat-tgattccctcatttggaatcttatt	Protospacer
 ....** * ***** ********* *******

101. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032314 (Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence) position: , mismatch: 8, identity: 0.75

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
gtgacgggctccgcgcagggaatactgtactt	Protospacer
****** * **************. .** .*.

102. spacer 3.11|1067201|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_015146 (Pseudarthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, complete sequence) position: , mismatch: 8, identity: 0.75

-gtctgtgcccgcatgaacacgccccgtgcgtc	CRISPR spacer
tattcgt-cccgcaggaacacgccccgggcgct	Protospacer
 .*..** ****** ************ ***..

103. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045375 (Sulfitobacter sp. THAF37 plasmid pTHAF37_c, complete sequence) position: , mismatch: 9, identity: 0.719

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
ttctggcgcgcgatcgcttcttcgaccagaag	Protospacer
 *. *  .*****.******.**********

104. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037914 (Sphingomonas sp. AAP5 plasmid p213, complete sequence) position: , mismatch: 9, identity: 0.719

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
ttgagcgacgcgaccgctttctcgacgcgctc	Protospacer
 * **.*************.******  *  .

105. spacer 1.9|585857|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN694313 (Marine virus AFVG_250M1015, complete genome) position: , mismatch: 9, identity: 0.719

gttaagcaggccgccaatgtacagcgcttggt	CRISPR spacer
gctgagcaggccgcgaatgaacagcgcgccaa	Protospacer
*.*.********** **** ******* . .

106. spacer 1.10|585917|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atcttccttgtttaaatgcaagtaatctcatg	CRISPR spacer
cttttccttgtttaaattcaattaattgaaat	Protospacer
 *.************** *** ****.  *

107. spacer 1.11|585977|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK088078 (Marinobacter phage AS1, complete genome) position: , mismatch: 9, identity: 0.719

atcgcaaagcctgctggctctggttttttgtc	CRISPR spacer
ttccttaagcctgctggctctggcgttttccg	Protospacer
 ** . *****************. **** .

108. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035418 (Leisingera sp. NJS204 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
gaacccgatatcatcgcgcagcgcgaatttga	Protospacer
. .** ******.*************    **

109. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038237 (Leisingera sp. NJS201 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
gaacccgatatcatcgcgcagcgcgaatttga	Protospacer
. .** ******.*************    **

110. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

-atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
cgcgtc-catatcggcgcgcagcgcgatcgaac	Protospacer
 ..*.*  ****** ************* **.

111. spacer 2.2|1056075|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719

tgggtagccaagaccgccacgcaagcctttgt	CRISPR spacer
gcgcgcgccaagaccgccgcgcacgccttcgc	Protospacer
  *   ************.**** *****.*.

112. spacer 2.6|1056315|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to HQ615693 (Synechococcus phage S-CRM01, complete genome) position: , mismatch: 9, identity: 0.719

taaatcaccagacggtagggattatgcggtct	CRISPR spacer
taaatcaccagccggaagggatttcgacaagt	Protospacer
*********** *** ******* .*  .  *

113. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
gggcaatgatactttcgtctttgccgccaatc	Protospacer
   ..*****.**********.******  **

114. spacer 2.16|1056916|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015032 (Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence) position: , mismatch: 9, identity: 0.719

agaagtaccagcgcgcagagtccac-----tccccag	CRISPR spacer
cgaggtacccgcgcgcagagtccatgtatgtc-----	Protospacer
 **.***** **************.     **

115. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KX550443 (Mycobacterium phage Magnito, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

116. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MK112532 (Mycobacterium phage Bones, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

117. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_028941 (Mycobacterium phage Turj99, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

118. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to EU744249 (Mycobacterium phage Lockley, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

119. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MH697575 (Mycobacterium phage Adahisdi, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

120. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to EU744252 (Mycobacterium phage DD5, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

121. spacer 2.17|1056976|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KF024724 (Mycobacterium phage Trouble, complete genome) position: , mismatch: 9, identity: 0.719

attacagaggtgacctccactgcttcgtcccc	CRISPR spacer
ggaggccaggtgaccttcactgcttcttcccc	Protospacer
.  .   *********.********* *****

122. spacer 2.18|1057036|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043525 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcttgccgttgtcagataccttcaggtaga	CRISPR spacer
atgcttgtcgttgtcagatactttaaaaaaag	Protospacer
 ******.*************.** *.. *..

123. spacer 2.18|1057036|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_007191 (Lactococcus lactis cremoris 712 plasmid pAG6, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcttgccgttgtcagataccttcaggtaga	CRISPR spacer
atgcttgtcgttgtcagatactttaaaaaaag	Protospacer
 ******.*************.** *.. *..

124. spacer 2.18|1057036|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016739 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcttgccgttgtcagataccttcaggtaga	CRISPR spacer
atgcttgtcgttgtcagatactttaaaaaaag	Protospacer
 ******.*************.** *.. *..

125. spacer 2.18|1057036|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_017498 (Lactococcus lactis plasmid pSK11A, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcttgccgttgtcagataccttcaggtaga	CRISPR spacer
atgcttgtcgttgtcagatactttaaaaaaag	Protospacer
 ******.*************.** *.. *..

126. spacer 2.18|1057036|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_008504 (Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcttgccgttgtcagataccttcaggtaga	CRISPR spacer
atgcttgtcgttgtcagatactttaaaaaaag	Protospacer
 ******.*************.** *.. *..

127. spacer 2.21|1057216|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to CP054928 (Streptomyces fulvissimus strain NA06532 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aaacgcgacacccccacagccagcggcgttca	CRISPR spacer
cgacgcgatccccccacagccagcgcagcgcc	Protospacer
 .******. ***************  *. *

128. spacer 2.22|1057276|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_012527 (Deinococcus deserti VCD115 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

ggaccgcctgaacatccatcagctcatccggc	CRISPR spacer
ggaccgccggaacatccttcagcaggacgcgg	Protospacer
******** ******** *****  . *  *

129. spacer 2.22|1057276|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 9, identity: 0.719

ggaccgcctgaacatccatcagctcatccggc	CRISPR spacer
agtgttcctgaacatccatcacctcacccccc	Protospacer
.*  . *************** ****.**  *

130. spacer 2.24|1057396|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to CP000618 (Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence) position: , mismatch: 9, identity: 0.719

gcgaactgctgctgcgacagcacagcaatgag	CRISPR spacer
gcgatctgctgctgcgtcagcacgtcacgtgc	Protospacer
**** *********** ******. **   .

131. spacer 2.27|1057576|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to LR745207 (uncultured phage genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

tcggtcatgtcgatgagtaaagcctcgggcaa	CRISPR spacer
ataataacgtcgatgggtacagcctcgggcac	Protospacer
 ...* *.*******.*** ***********

132. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 9, identity: 0.727

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
ccacaaaaacctaaagagttttttaatttaaac	Protospacer
*.  *************.******.***   *.

133. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 9, identity: 0.727

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
ggtttagaacctaaagaaacttttgattattta	Protospacer
  *  *.*********** .***********

134. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MH321491 (Staphylococcus phage Twillingate, complete genome) position: , mismatch: 9, identity: 0.727

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
ggtttagaacctaaagaaacttttgattattta	Protospacer
  *  *.*********** .***********

135. spacer 3.15|1067381|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014580 (Burkholderia sp. RPE67 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

atcagtgatgccgtagtgataaagctctgcgc	CRISPR spacer
cgcggtgatgccgtagtcacaaagctccaccg	Protospacer
  *.************* *.*******..*

136. spacer 1.7|585737|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_016592 (Burkholderia sp. YI23 plasmid byi_3p, complete sequence) position: , mismatch: 10, identity: 0.688

atcgggatgcccgcgttgcgcttttggaatat	CRISPR spacer
tccgggaagcccgcgttgcgcatttgctcggc	Protospacer
 .***** ************* ****    ..

137. spacer 1.8|585797|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033971 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

aacactgaggggaaccgtcatgcaaaccgccg	CRISPR spacer
tcgactgagggggagcgtcatgcaaaagcact	Protospacer
   *********.* ***********    *

138. spacer 1.10|585917|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MT820023 (Cryophage ML09, complete genome) position: , mismatch: 10, identity: 0.688

atcttccttgtttaaatgcaagtaatctcatg	CRISPR spacer
tgcccatatgtttaaatgcaaataatttcata	Protospacer
  *.. . *************.****.****.

139. spacer 1.15|586217|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to MN694805 (Marine virus AFVG_250M201, complete genome) position: , mismatch: 10, identity: 0.688

attcagcaccagagtctttgatgcgctcaatt	CRISPR spacer
attcaggaccagagtctttcatgggaaaggca	Protospacer
****** ************ *** *   ...

140. spacer 1.21|586577|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.688

atgccggatatcgtcgcgcagcgcgatagaga	CRISPR spacer
cagccggatgtcggcgcgcagcgcgcggttca	Protospacer
  *******.*** ***********  .   *

141. spacer 1.22|586637|32|AP018933|CRISPRCasFinder,CRT matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 10, identity: 0.688

tgcaaacaagtctgcaggaatcctacaaacta	CRISPR spacer
acctcgcaagtctgaaggattcctacaaaggc	Protospacer
  *  .******** **** *********

142. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

143. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

144. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

145. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

146. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

147. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctcgggcg	Protospacer
. *********** .********** *   .

148. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

149. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

150. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

151. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

152. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

153. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

154. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

155. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

156. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

157. spacer 2.8|1056435|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.688

tcctgatgatgctttcgtcttcgccgcctttc	CRISPR spacer
cactgatgatgctgccgtcttcgcctctggcg	Protospacer
. *********** .********** *.  .

158. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcctccatcagcccgccacagctcactgt	CRISPR spacer
aagtcctccatcagctcgccatagctctgcag	Protospacer
. * ***********.*****.*****  ..

159. spacer 2.24|1057396|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 10, identity: 0.688

gcgaactgctgctgcgacagcacagcaatgag	CRISPR spacer
gcgatctgctgcggcgacagcacgtcgcgcgc	Protospacer
**** ******* **********. *.   .

160. spacer 3.3|1066720|33|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 10, identity: 0.697

cttgaaaaacctaaagaattttttgattattat	CRISPR spacer
tcacaaaaacctaaagagttttttaatttaaac	Protospacer
..  *************.******.***   *.

161. spacer 3.9|1067081|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 10, identity: 0.688

atcacgaacttaaatccggtcgtaatctcgct	CRISPR spacer
gctaaattctttaatccggtcgtaatcgcgcc	Protospacer
...* .  *** *************** ***.

162. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KX961385 (Bordetella virus LK3, complete genome) position: , mismatch: 10, identity: 0.688

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
aggcggcgattcgcgccgggaatgacgtacag	Protospacer
. *  *****.***** *********** .

163. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KY000220 (Bordetella phage FP1, complete genome) position: , mismatch: 10, identity: 0.688

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
aggcggcgattcgcgccgggaatgacgtacag	Protospacer
. *  *****.***** *********** .

164. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to KY000221 (Bordetella phage CN1, complete genome) position: , mismatch: 10, identity: 0.688

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
aggcggcgattcgcgccgggaatgacgtacag	Protospacer
. *  *****.***** *********** .

165. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_047877 (Bordetella phage CN2, complete genome) position: , mismatch: 10, identity: 0.688

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
aggcggcgattcgcgccgggaatgacgtacag	Protospacer
. *  *****.***** *********** .

166. spacer 3.20|1067681|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044180 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-3, complete sequence) position: , mismatch: 10, identity: 0.688

ttacgagacgccgctagcgcacgcaacacaac	CRISPR spacer
aaccgagacgcagctcgcgcacgcaatcctct	Protospacer
   ******** *** **********. *  .

167. spacer 3.20|1067681|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030187 (Salmonella enterica strain SA20094620 plasmid pSA20094620.2, complete sequence) position: , mismatch: 10, identity: 0.688

ttacgagacgccgctagcgcacgcaacacaac	CRISPR spacer
aaccgagacgcagctcgcgcacgcaatcctct	Protospacer
   ******** *** **********. *  .

168. spacer 3.20|1067681|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051133 (Enterobacter hormaechei strain AMS-38 plasmid pAMS-38a, complete sequence) position: , mismatch: 10, identity: 0.688

ttacgagacgccgctagcgcacgcaacacaac	CRISPR spacer
aaccgagacgcagctcgcgcacgcaatcctct	Protospacer
   ******** *** **********. *  .

169. spacer 2.21|1057216|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 11, identity: 0.656

aaacgcgacacccccacagccagcggcgttca	CRISPR spacer
gggatcgacacccgcaccgccagcggcgccac	Protospacer
...  ******** *** **********..

170. spacer 3.2|1066660|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to NC_012527 (Deinococcus deserti VCD115 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.656

tttaaggggaaacaggtttcaggagaagcaat	CRISPR spacer
ccgccagggaaaccggtgtcaggagaagcgtc	Protospacer
..   .******* *** ***********. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1307702 : 1348153

Pectobacterium_phage(51.85%)

terminase,integrase,tRNA,tail,transposase,holin

attL 1300216:1300230|attR 1353165:1353179

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1300216:1300230	attL	NA	NA	NA	NA
BBG29961.1\|1307702_1309979_-	soluble lytic murein transglycosylase	G0YQ25	Erwinia_phage	1.5e-17	40.2
BBG29962.1\|1309577_1309691_+	site-specific recombinases, DNA invertase	NA	NA	NA	NA
BBG29963.1\|1309988_1310135_-	alanine racemase	NA	NA	NA	NA
BBG29964.1\|1310179_1310581_-	permeases of thedrug/metabolite transporter	H9C1A4	Pectobacterium_phage	2.5e-08	32.8
BBG29965.1\|1310179_1310569_-	polyphosphate kinase	H9C1A4	Pectobacterium_phage	2.4e-08	32.8
BBG29966.1\|1310661_1311066_-	pyruvate kinase	H9C1A3	Pectobacterium_phage	6.3e-36	56.0
BBG29967.1\|1311070_1312222_-	membrane carboxypeptidase	H9C1A2	Pectobacterium_phage	2.0e-74	39.6
BBG29968.1\|1312224_1312785_-	CBS-domain-containing membrane protein	H9C1A1	Pectobacterium_phage	1.2e-29	44.7
BBG29969.1\|1312784_1313213_-	hypothetical protein	H9C1A0	Pectobacterium_phage	7.1e-30	49.0
BBG29970.1\|1313217_1313715_-\|transposase	transposase	H9C199	Pectobacterium_phage	2.4e-21	38.8
BBG29971.1\|1313711_1314131_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C198	Pectobacterium_phage	1.2e-21	46.6
BBG29972.1\|1314102_1314378_-	IMP dehydrogenase/GMP reductase	NA	NA	NA	NA
BBG29973.1\|1314429_1315389_-	uncharacterized protein conserved in bacteria	H9C196	Pectobacterium_phage	7.1e-78	50.2
BBG29974.1\|1315406_1315925_-	uncharacterized protein conserved in bacteria	H9C195	Pectobacterium_phage	1.4e-24	43.1
BBG29975.1\|1315924_1317331_-	uncharacterized protein conserved in bacteria	H9C194	Pectobacterium_phage	2.3e-56	39.1
BBG29976.1\|1317167_1318223_-	uncharacterized protein, homolog of phage Mu	H9C193	Pectobacterium_phage	1.3e-45	43.5
BBG29977.1\|1318131_1319496_-	uncharacterized protein conserved in bacteria	H9C192	Pectobacterium_phage	4.2e-116	49.8
BBG29978.1\|1319513_1319936_-	Myb superfamily proteins	NA	NA	NA	NA
BBG29979.1\|1319929_1321570_-	uncharacterized protein conserved in bacteria	H9C191	Pectobacterium_phage	6.4e-228	67.7
BBG29980.1\|1321574_1322561_-\|terminase	phage terminase, small subunit	A0A248SKT2	Klebsiella_phage	3.9e-39	43.1
BBG29981.1\|1321892_1322174_+	permeases of the major facilitator	NA	NA	NA	NA
BBG29982.1\|1323442_1324123_-	uncharacterized phage-encoded protein	Q9XJS9	Pseudomonas_phage	6.6e-54	58.4
BBG29983.1\|1324462_1324870_+	uncharacterized conserved protein	A0A0D4DCG1	Acinetobacter_phage	3.2e-40	60.9
BBG29984.1\|1324937_1326350_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG29985.1\|1326427_1326781_-\|holin	phage holin, lambda family	NA	NA	NA	NA
BBG29986.1\|1328028_1328757_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
BBG29987.1\|1328028_1328721_-	conserved PrkA cluster protein	NA	NA	NA	NA
BBG29988.1\|1328717_1329095_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG29989.1\|1329091_1329412_-	cytochrome c5	A0A2I7RNU4	Vibrio_phage	5.1e-25	54.8
BBG29990.1\|1329408_1329909_-	protein implicated in iron transport	A0A2K8I9A9	Pseudomonas_phage	2.2e-30	40.3
BBG29991.1\|1329905_1330667_-	restriction endonuclease	A0A1B0VMD9	Pseudomonas_phage	2.4e-28	40.1
BBG29992.1\|1330660_1331623_-	pyocin large subunit	L7TIA9	Pseudomonas_virus	3.5e-32	52.6
BBG29993.1\|1332160_1332409_-\|transposase	transposase and inactivated derivatives	NA	NA	NA	NA
BBG29994.1\|1337636_1337882_+	hypothetical protein	NA	NA	NA	NA
BBG29995.1\|1338131_1338503_+\|tail	phage-related minor tail protein	NA	NA	NA	NA
BBG29996.1\|1338570_1338840_+	DNA mismatch repair protein MutS	NA	NA	NA	NA
BBG29997.1\|1338836_1338992_+	hypothetical protein	NA	NA	NA	NA
BBG29998.1\|1339059_1339836_+	membrane-associated lipoprotein	K4NWX3	Pseudomonas_phage	2.4e-60	53.5
BBG29999.1\|1339822_1340437_+	phage-related protein, predicted endonuclease	A0A1B0VMB3	Pseudomonas_phage	4.9e-64	58.0
BBG30000.1\|1340260_1340977_-	uncharacterized conserved protein	NA	NA	NA	NA
BBG30001.1\|1340446_1340953_+	single-stranded DNA-binding protein	A0A1J0GVQ0	Pseudoalteromonas_phage	5.3e-24	54.2
BBG30002.1\|1342071_1342266_+	chromosome segregation ATPase	NA	NA	NA	NA
BBG30003.1\|1342360_1343233_-	signal transduction histidine kinase	NA	NA	NA	NA
BBG30004.1\|1345702_1346794_+	phage anti-repressor protein	A0A0P0ZAZ7	Stx2-converting_phage	7.9e-33	59.3
BBG30005.1\|1347106_1348153_+\|integrase	integrase	Q9T1P3	Pseudomonas_phage	5.5e-76	42.1
1353165:1353179	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1837652 : 1846578

uncultured_Caudovirales_phage(12.5%)

integrase

attL 1835794:1835808|attR 1841777:1841791

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1835794:1835808	attL	NA	NA	NA	NA
BBG30432.1\|1837652_1838927_+\|integrase	integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	2.4e-118	53.1
BBG30433.1\|1839376_1839895_-	ABC-type sugar transport system, ATPase	A0A2I7R2D6	Vibrio_phage	9.9e-18	52.7
BBG30434.1\|1840311_1841160_-	site-specific DNA methylase	A0A0K1LM14	Caulobacter_phage	7.4e-63	45.6
BBG30435.1\|1841164_1841605_-	predicted pyrophosphatase	D9J0X5	Brochothrix_phage	6.0e-16	45.2
BBG30436.1\|1843440_1844394_-	DNA recombination-dependent growth factor C	A0A1J0GUV6	Halomonas_phage	1.5e-72	47.2
1841777:1841791	attR	NA	NA	NA	NA
BBG30437.1\|1844403_1844949_-	single-stranded DNA-binding protein	M4SRQ0	Psychrobacter_phage	1.1e-35	62.1
BBG30438.1\|1844959_1845751_-	recombinational DNA repair protein	Q858E1	Salmonella_phage	6.2e-72	55.8
BBG30439.1\|1845747_1846578_-	dehydrogenases	A0A1P8DTH1	Proteus_phage	1.7e-75	51.7

DBSCAN-SWA_3

1854208 : 1868462

Aeromonas_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30447.1\|1854208_1855129_+	chemotaxis protein histidine kinase	A5LH71	Enterobacteria_phage	1.3e-33	52.9
BBG30448.1\|1855122_1855428_+	delta 1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
BBG30449.1\|1855364_1856297_+	autotransporter adhesin	Q8HAQ4	Burkholderia_phage	1.6e-42	35.9
BBG30450.1\|1856309_1856747_+	ABC-type multidrug transport system, ATPase	NA	NA	NA	NA
BBG30451.1\|1856747_1857161_+	dioxygenases related to 2-nitropropane	H9C0W7	Aeromonas_phage	3.2e-11	38.2
BBG30452.1\|1857363_1859805_+	soluble lytic mureintransglycosylase	G0YQ25	Erwinia_phage	8.0e-17	48.0
BBG30453.1\|1859785_1860547_+	glutamate decarboxylase	A0A2R3UAZ1	Myoviridae_environmental_samples	2.9e-10	32.6
BBG30454.1\|1860543_1860837_+	non-ribosomal peptide synthetase modules	A0A077K9U4	Edwardsiella_phage	1.3e-14	41.5
BBG30455.1\|1862500_1863409_+	type V secretory pathway, adhesin AidA	A0A1V0DZ87	Acinetobacter_phage	5.0e-17	26.9
BBG30456.1\|1863401_1864130_+	uncharacterized conserved protein	Q2NPA1	Xanthomonas_phage	1.4e-30	32.8
BBG30457.1\|1864140_1864434_+	uncharacterized conserved protein	NA	NA	NA	NA
BBG30458.1\|1864509_1864863_+	pyridoxamine-phosphate oxidase	NA	NA	NA	NA
BBG30459.1\|1864872_1866087_+	uncharacterized homolog of phage Mu protein gp47	A0A2R3UAL9	Myoviridae_environmental_samples	3.2e-83	42.7
BBG30460.1\|1866083_1866689_+	DNA-directed RNA polymerase	H9C0Y0	Aeromonas_phage	3.7e-32	43.3
BBG30461.1\|1866692_1868462_+	predicted Fe-S oxidoreductases	H9C0Y1	Aeromonas_phage	4.4e-17	38.4

DBSCAN-SWA_4

1897746 : 1903584

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30485.1\|1897746_1898679_-	predicted transcriptional regulator	A0A1B1IVT7	uncultured_Mediterranean_phage	2.2e-20	32.2
BBG30486.1\|1898694_1899615_-	uncharacterized conserved protein	A0A1B1IVW1	uncultured_Mediterranean_phage	3.9e-09	26.0
BBG30487.1\|1898697_1898949_+	hypothetical protein	NA	NA	NA	NA
BBG30488.1\|1899739_1901656_-	DNA or RNA helicases of superfamily II	A0A0K0MD54	Pseudoalteromonas_phage	2.2e-91	38.2
BBG30489.1\|1899739_1901641_-	DNA or RNA helicases of superfamily II	A0A0K0MD54	Pseudoalteromonas_phage	2.2e-91	38.2
BBG30490.1\|1901595_1902201_+	4-hydroxybenzoate synthetase	NA	NA	NA	NA
BBG30491.1\|1902192_1902714_-	cytosine/adenosine deaminases	S4VYT2	Pandoravirus	6.5e-09	46.9
BBG30492.1\|1902753_1903584_-	NAD synthase	G3MA24	Bacillus_virus	1.6e-81	57.4

DBSCAN-SWA_5

1960577 : 1972315

Klosneuvirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30540.1\|1960577_1963187_-\|tRNA	alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	7.8e-79	37.7
BBG30541.1\|1963426_1963933_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30542.1\|1964084_1965158_-	RecA/RadA recombinase	A0A2D1GPX2	Mycobacterium_phage	1.1e-111	60.1
BBG30543.1\|1965367_1965916_-	uncharacterized protein	B5TK85	Pseudomonas_phage	1.2e-34	51.9
BBG30544.1\|1966174_1968772_+	mismatch repair ATPase	A0A1V0SDQ0	Indivirus	1.1e-29	24.5
BBG30545.1\|1968927_1969251_+	ferredoxin	NA	NA	NA	NA
BBG30546.1\|1969579_1971241_+	predicted membrane protein	NA	NA	NA	NA
BBG30547.1\|1969927_1971223_-	enolase	A0A1X9I5Z8	Streptococcus_phage	5.9e-128	56.9
BBG30548.1\|1971463_1972315_-	2-dehydro-3-deoxyphosphooctonate aldolase	E3T537	Cafeteria_roenbergensis_virus	2.8e-46	40.6

DBSCAN-SWA_6

2142160 : 2150819

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30694.1\|2142160_2142772_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-26	38.2
BBG30695.1\|2142768_2143860_-	phosphoribosylaminoimidazole(AIR) synthetase	A0A0E3F760	Synechococcus_phage	1.3e-59	45.7
BBG30696.1\|2143846_2145259_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	7.3e-55	34.0
BBG30697.1\|2145234_2147460_-	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	5.2e-156	42.6
BBG30698.1\|2147464_2148148_-	phosphoribosylformylglycinamidine synthase subunit I	NA	NA	NA	NA
BBG30699.1\|2148132_2148414_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
BBG30700.1\|2148400_2149117_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0E3ELL5	Synechococcus_phage	1.7e-47	43.9
BBG30701.1\|2149170_2150334_-	phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA
BBG30702.1\|2150330_2150819_-	phosphoribosylaminoimidazole carboxylase I	A0A2P0VNU7	Tetraselmis_virus	8.7e-16	38.2

DBSCAN-SWA_7

2329099 : 2389482

Planktothrix_phage(20.0%)

integrase,tRNA,holin,protease

attL 2348703:2348719|attR 2397226:2397242

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30853.1\|2329099_2330527_+\|protease	trypsin-like serine proteases	A0A1B1IT49	uncultured_Mediterranean_phage	8.2e-22	29.3
BBG30854.1\|2330609_2331932_-	histidinol dehydrogenase	NA	NA	NA	NA
BBG30855.1\|2332018_2332681_-	ATP phosphoribosyltransferase	NA	NA	NA	NA
BBG30856.1\|2332784_2334041_-	UDP-N-acetylglucosamine enolpyruvyl transferase	NA	NA	NA	NA
BBG30857.1\|2334118_2334361_-	predicted transcriptional regulator, BolA	NA	NA	NA	NA
BBG30858.1\|2334501_2334831_-	anti-sigma-factor antagonist (STAS) domain protein	NA	NA	NA	NA
BBG30859.1\|2334842_2335652_-	ABC-type transport system	NA	NA	NA	NA
BBG30860.1\|2335660_2336179_-	putative ABC transport system substrate-binding protein	NA	NA	NA	NA
BBG30861.1\|2336175_2336961_-	putative ABC transport system permease protein	NA	NA	NA	NA
BBG30862.1\|2336960_2337773_-	putative ABC transport system ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-24	33.3
BBG30863.1\|2338175_2339147_+	arabinose-5-phosphate isomerase	NA	NA	NA	NA
BBG30864.1\|2339272_2339893_+	low specificity phosphatase	A0A222YVZ6	Synechococcus_phage	8.0e-06	29.5
BBG30865.1\|2339986_2340601_+	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30866.1\|2340626_2341154_+	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30867.1\|2341193_2341997_-	pyruvate decarboxylase	NA	NA	NA	NA
BBG30868.1\|2341286_2342012_+	ABC-type (unclassified) transport system, ATPase	A0A2H4PQG7	Staphylococcus_phage	7.6e-24	27.9
BBG30869.1\|2342108_2342336_-	ketopantoate hydroxymethyltransferase	NA	NA	NA	NA
BBG30870.1\|2342707_2344150_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
BBG30871.1\|2344261_2344642_+	ribosome-associated protein Y	NA	NA	NA	NA
BBG30872.1\|2344907_2345807_+	predicted P-loop-containing kinase	A0A0R8VB27	Thermobifida_phage	1.9e-08	30.6
BBG30873.1\|2345930_2346527_-	amino acid permeases	NA	NA	NA	NA
BBG30874.1\|2346752_2348090_-\|protease	predicted Zn-dependent proteases	NA	NA	NA	NA
BBG30875.1\|2348217_2348739_+	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
2348703:2348719	attL	NA	NA	NA	NA
BBG30876.1\|2348896_2350582_-	formyltetrahydrofolate synthetase	NA	NA	NA	NA
BBG30877.1\|2350778_2352317_-\|protease	predicted Zn-dependent proteases	NA	NA	NA	NA
BBG30878.1\|2352282_2356176_-	predicted membrane protein	NA	NA	NA	NA
BBG30879.1\|2356180_2357644_-	ribonucleases G and E	NA	NA	NA	NA
BBG30880.1\|2357819_2358404_-	nucleotide-binding protein	NA	NA	NA	NA
BBG30881.1\|2358428_2358914_-	rod shape-determining protein MreD	NA	NA	NA	NA
BBG30882.1\|2358903_2359974_-	rod shape-determining protein MreC	NA	NA	NA	NA
BBG30883.1\|2359959_2361012_+	homoserine acetyltransferase	NA	NA	NA	NA
BBG30884.1\|2360010_2361048_-	actin-like ATPase	NA	NA	NA	NA
BBG30885.1\|2361304_2361592_+\|tRNA	asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase C	NA	NA	NA	NA
BBG30886.1\|2361680_2363129_+\|tRNA	asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A	NA	NA	NA	NA
BBG30887.1\|2363147_2364608_+\|tRNA	asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase B	NA	NA	NA	NA
BBG30888.1\|2366590_2367394_+	chemotaxis protein histidine kinase	NA	NA	NA	NA
BBG30889.1\|2367312_2367822_-	histone acetyltransferase HPA2	NA	NA	NA	NA
BBG30890.1\|2367879_2368992_-\|holin	putative glycine betaine/choline/proline transport system ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-25	31.8
BBG30891.1\|2368988_2369642_-	probable permease of ABC transporter	NA	NA	NA	NA
BBG30892.1\|2369651_2370587_-	glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein	NA	NA	NA	NA
BBG30893.1\|2370585_2370813_+	transcriptional regulators	NA	NA	NA	NA
BBG30894.1\|2370594_2371500_-	substrate-binding region of ABC-type glycine betaine transport system	NA	NA	NA	NA
BBG30895.1\|2371576_2372263_-\|holin	betaine/choline/proline family transporter, inner membrane subunit	NA	NA	NA	NA
BBG30896.1\|2372594_2373689_-	spermidine/putrescine transport system substrate-binding protein	NA	NA	NA	NA
BBG30897.1\|2373685_2374492_-	binding-protein-dependent transport systems inner membrane component	NA	NA	NA	NA
BBG30898.1\|2374488_2375403_-	binding-protein-dependent transport systems inner membrane component	Q6GZ02	Mycoplasma_phage	1.3e-07	22.8
BBG30899.1\|2375450_2376620_-	ABC-type spermidine/putrescine transport	Q6GZ03	Mycoplasma_phage	8.8e-30	39.2
BBG30900.1\|2376818_2377679_-	methylase of polypeptide chain release factors	NA	NA	NA	NA
BBG30901.1\|2377675_2378758_-	protein chain release factorA	NA	NA	NA	NA
BBG30902.1\|2378754_2380110_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
BBG30903.1\|2380602_2382405_+	tetratricopeptide TPR_4	NA	NA	NA	NA
BBG30904.1\|2381943_2382036_-	hypothetical protein	NA	NA	NA	NA
BBG30905.1\|2382581_2383211_+	outer membrane lipoprotein LolB	NA	NA	NA	NA
BBG30906.1\|2383760_2384651_+	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA
BBG30907.1\|2384866_2385808_+	phosphoribosylpyrophosphate synthetase	A0A1V0SHF7	Hokovirus	1.0e-44	36.6
BBG30908.1\|2385881_2386628_+	ribosomal protein L25	NA	NA	NA	NA
BBG30909.1\|2386713_2387298_+\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
BBG30910.1\|2387336_2388431_+	predicted GTPase, probable translation factor	NA	NA	NA	NA
BBG30911.1\|2388645_2389482_+\|integrase	integrase	Q7M297	Enterobacteria_phage	8.4e-43	37.5
2397226:2397242	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2403407 : 2468242

Staphylococcus_phage(37.5%)

transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG30919.1\|2403407_2405462_+\|protease	periplasmic protease	A0A0R6PIZ1	Moraxella_phage	1.4e-86	32.4
BBG30920.1\|2406684_2406897_-	similar to 2 alpha fibrillar collagen, partial	NA	NA	NA	NA
BBG30921.1\|2407187_2407445_+	uncharacterized conserved protein	NA	NA	NA	NA
BBG30922.1\|2407435_2408551_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
BBG30923.1\|2408581_2409691_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30924.1\|2409689_2410373_+\|holin	choline dehydrogenases	NA	NA	NA	NA
BBG30925.1\|2409887_2410421_-	hemolysin-coregulated protein	NA	NA	NA	NA
BBG30926.1\|2410776_2413260_-	OmpA/MotB	NA	NA	NA	NA
BBG30927.1\|2413284_2414205_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30928.1\|2414226_2418375_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30929.1\|2418391_2419099_-	uncharacterized proteinconserved in bacteria	NA	NA	NA	NA
BBG30930.1\|2419095_2420442_-	uncharacterized proteinconserved in bacteria	NA	NA	NA	NA
BBG30931.1\|2420481_2421060_-	lipoprotein, putative	NA	NA	NA	NA
BBG30932.1\|2421118_2423755_-	ATPase with chaperone activity, ATP-binding	A0A223W0B1	Agrobacterium_phage	3.4e-90	32.9
BBG30933.1\|2423751_2424825_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30934.1\|2424788_2426630_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30935.1\|2426626_2427103_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30936.1\|2427158_2428661_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30937.1\|2428680_2429214_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG30938.1\|2429281_2430034_-	preprotein translocase subunit SecA	NA	NA	NA	NA
BBG30939.1\|2430083_2430530_-	uncharacterized lipoprotein NlpE	NA	NA	NA	NA
BBG30940.1\|2431273_2432218_+	transcriptional regulator	NA	NA	NA	NA
BBG30941.1\|2432251_2435371_-	probable drug efflux pump transmembrane protein	S5VTK5	Leptospira_phage	5.2e-61	22.7
BBG30942.1\|2435367_2438499_-	cation/multidrug efflux pump	NA	NA	NA	NA
BBG30943.1\|2438495_2439689_-	putative efflux transport protein	NA	NA	NA	NA
BBG30944.1\|2447072_2449508_-\|protease	ATP-dependent Lon protease, bacterial type	A0A0R6PGP8	Moraxella_phage	5.3e-138	37.7
BBG30945.1\|2449750_2451025_-	ATP phosphoribosyltransferase	NA	NA	NA	NA
BBG30946.1\|2451195_2452887_-	ADP-heptose:LPS heptosyltransferase	NA	NA	NA	NA
BBG30947.1\|2453143_2454496_-\|protease	subtilisin-like serine proteases	NA	NA	NA	NA
BBG30948.1\|2454563_2455799_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
BBG30949.1\|2456066_2457047_-	thiamine monophosphate kinase	NA	NA	NA	NA
BBG30950.1\|2457059_2457560_-	transcription termination factor	NA	NA	NA	NA
BBG30951.1\|2457556_2458060_-	riboflavin synthase beta-chain	A0A2H4PQS3	Staphylococcus_phage	2.0e-23	36.9
BBG30952.1\|2457565_2458111_+	ubiquitin-protein ligase	NA	NA	NA	NA
BBG30953.1\|2458174_2459317_-	3,4-dihydroxy-2-butanone4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.6e-52	35.9
BBG30954.1\|2459380_2460553_-	pyrimidine reductase, riboflavin biosynthesis	A0A2I2L4R9	Orpheovirus	3.4e-42	30.7
BBG30955.1\|2460515_2460998_-	hypothetical protein	NA	NA	NA	NA
BBG30956.1\|2460524_2461049_+	arginine/ornithine N-succinyltransferase	NA	NA	NA	NA
BBG30957.1\|2461195_2461855_+	putative alkylated DNA repair protein	NA	NA	NA	NA
BBG30958.1\|2461948_2462209_+	putative alkylated DNA repair protein	NA	NA	NA	NA
BBG30959.1\|2462292_2463294_-	16S RNA G1207 methylase RsmC	NA	NA	NA	NA
BBG30960.1\|2463384_2464155_-	SAM-dependent methyltransferases	NA	NA	NA	NA
BBG30961.1\|2465142_2465787_+\|transposase	transposase and inactivated derivatives, IS30	W5R8L2	Staphylococcus_phage	6.1e-25	36.2
BBG30962.1\|2466157_2468242_-\|protease	predicted ATP-dependent Lon-type protease	NA	NA	NA	NA

DBSCAN-SWA_9

2609115 : 2621533

uncultured_Caudovirales_phage(33.33%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG31076.1\|2609115_2609328_-\|tail	P2-like prophage tailprotein X	A2I2Y3	Vibrio_virus	1.9e-12	51.5
BBG31077.1\|2609317_2609704_-	phage protein U	A0A2H4JAC8	uncultured_Caudovirales_phage	1.9e-34	52.0
BBG31078.1\|2609721_2612886_-\|tail	phage-related tail protein	NA	NA	NA	NA
BBG31079.1\|2611089_2611359_+	ribosomal protein L21	NA	NA	NA	NA
BBG31080.1\|2613018_2613594_-	GTPase-activating protein that regulates ARFs	B0ZSH0	Halomonas_phage	1.4e-36	42.5
BBG31081.1\|2613744_2614254_-\|tail	phage tail tube protein FII	B0ZSG9	Halomonas_phage	2.0e-31	41.6
BBG31082.1\|2614246_2615437_-\|tail	phage tail sheath protein FI	B0ZSG8	Halomonas_phage	8.1e-116	53.0
BBG31083.1\|2615448_2615634_-	predicted drug exporters of the RND superfamily	NA	NA	NA	NA
BBG31084.1\|2615729_2616983_-\|tail	phage-related tail fibre protein	A0A1W6JT73	Escherichia_phage	7.6e-56	34.1
BBG31085.1\|2617004_2618126_-\|tail	phage-related tail fibre protein	A0A2I8TVA9	Erwinia_phage	2.6e-47	39.8
BBG31086.1\|2618136_2618937_-\|tail	bacteriophage P2-related tail formation protein	A0A2H4JDK0	uncultured_Caudovirales_phage	2.3e-42	51.1
BBG31087.1\|2618933_2619923_-\|plate	phage-related baseplate assemblyprotein	A0A2H4JC04	uncultured_Caudovirales_phage	5.7e-99	57.0
BBG31088.1\|2619916_2620252_-\|plate	phage baseplate assemblyprotein W	A2I2X7	Vibrio_virus	6.4e-26	50.9
BBG31089.1\|2620254_2620995_-\|plate	phage P2 baseplate assemblyprotein gpV	A0A2H4JBW8	uncultured_Caudovirales_phage	8.5e-31	33.8
BBG31090.1\|2620987_2621533_-	aspartatecarbamoyltransferase, catalytic chain	A2I2X3	Vibrio_virus	8.5e-20	37.6

DBSCAN-SWA_10

2829638 : 2938702

108

Ralstonia_phage(17.14%)

terminase,plate,capsid,integrase,tRNA,tail,portal,protease

attL 2830789:2830806|attR 2899459:2899476

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG31278.1\|2829638_2830073_-\|tRNA	N-formylmethionyl-tRNA deformylase	NA	NA	NA	NA
BBG31279.1\|2830223_2831696_-	sulfate permease and related transporters	A0A2H4J153	uncultured_Caudovirales_phage	2.1e-73	38.2
2830789:2830806	attL	NA	NA	NA	NA
BBG31280.1\|2832292_2833585_+	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	A0A2H4J162	uncultured_Caudovirales_phage	7.0e-12	38.5
BBG31281.1\|2834032_2834437_+	lactoylglutathione lyase and related lyases	NA	NA	NA	NA
BBG31282.1\|2834841_2835231_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
BBG31283.1\|2835242_2836784_-	anaerobic nitric oxide reductase transcription regulator	NA	NA	NA	NA
BBG31284.1\|2836961_2838401_+	uncharacterized flavoproteins	NA	NA	NA	NA
BBG31285.1\|2838411_2839554_+	nitric oxide reductase	NA	NA	NA	NA
BBG31286.1\|2839613_2840498_+	tellurite resistance protein TehB	NA	NA	NA	NA
BBG31287.1\|2840675_2842184_+	dipeptide/tripeptide permease	NA	NA	NA	NA
BBG31288.1\|2842287_2842959_+	lysophospholipase L1 and related esterases	NA	NA	NA	NA
BBG31289.1\|2843065_2843947_-	twin-arginine translocation pathway signal	A0A2N9QUX2	Trichoplusia_ni_ascovirus	6.1e-76	53.2
BBG31290.1\|2844539_2845385_+	pseudouridylate synthase	NA	NA	NA	NA
BBG31291.1\|2845504_2846500_-	Zn-dependent alcohol dehydrogenases, class III	NA	NA	NA	NA
BBG31292.1\|2845600_2846530_+	parvulin-like peptidyl-prolyl isomerase	NA	NA	NA	NA
BBG31293.1\|2846609_2847875_+	halovibrin	NA	NA	NA	NA
BBG31294.1\|2846629_2847082_-	hypothetical protein	NA	NA	NA	NA
BBG31295.1\|2848285_2849557_+	monoamine oxidase	NA	NA	NA	NA
BBG31296.1\|2849584_2850421_-	araC-type DNA-binding domain-containing proteins	NA	NA	NA	NA
BBG31297.1\|2850487_2850982_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
BBG31298.1\|2851292_2851463_-	large exoproteins	NA	NA	NA	NA
BBG31299.1\|2851390_2851567_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
BBG31300.1\|2851630_2851873_-	probable outer membrane efflux protein	NA	NA	NA	NA
BBG31301.1\|2851854_2852046_+	hypothetical protein	NA	NA	NA	NA
BBG31302.1\|2851890_2852094_-	hypothetical protein	NA	NA	NA	NA
BBG31303.1\|2852451_2854647_+	iron complex outer membrane recepter protein	NA	NA	NA	NA
BBG31304.1\|2854671_2855781_+	uncharacterized conserved protein	NA	NA	NA	NA
BBG31305.1\|2855827_2856727_-	transcriptional regulator, LysR family	NA	NA	NA	NA
BBG31306.1\|2856826_2857132_+	putative carboxymuconolactone decarboxylase	NA	NA	NA	NA
BBG31307.1\|2857134_2857524_+	probable tautomerase	NA	NA	NA	NA
BBG31308.1\|2857520_2858078_+	ppermeases of the major facilitator	NA	NA	NA	NA
BBG31309.1\|2858268_2859465_+	putative GTPase	NA	NA	NA	NA
BBG31310.1\|2859599_2861258_+	ATPase components of ABC transporters	A0A2K9L3Z8	Tupanvirus	3.6e-61	28.7
BBG31311.1\|2862525_2862975_+	NAD-dependent aldehyde dehydrogenases	NA	NA	NA	NA
BBG31312.1\|2863230_2864226_-\|capsid,portal	bacteriophage capsid portal protein	A4PE27	Ralstonia_virus	7.5e-99	55.5
BBG31313.1\|2864225_2866265_-	uncharacterized conserved protein	A0A077K8Q7	Ralstonia_phage	1.1e-189	54.9
BBG31314.1\|2866136_2866949_+	uncharacterized membrane-bound protein	A0A077K9W8	Ralstonia_phage	1.9e-60	47.6
BBG31315.1\|2866959_2867967_+	DNA polymerase III, alpha subunit	A0A077KEQ8	Ralstonia_phage	1.9e-118	61.3
BBG31316.1\|2867963_2868629_+\|terminase	phage small terminase subunit	A0A218M4L0	Erwinia_phage	3.3e-34	41.5
BBG31317.1\|2868738_2869215_+	anthranilate/para-aminobenzoate synthases	NA	NA	NA	NA
BBG31318.1\|2869211_2869430_+\|tail	P2-like prophage tail protein X	F1BUQ5	Erwinia_phage	1.1e-07	47.8
BBG31319.1\|2869401_2869680_+	hypothetical protein	NA	NA	NA	NA
BBG31320.1\|2869676_2870153_+	phage-related lysozyme	B6SD29	Bacteriophage	4.3e-28	45.9
BBG31321.1\|2870145_2870583_+	molecular chaperone	NA	NA	NA	NA
BBG31322.1\|2870419_2870680_+	uncharacterized conserved protein	NA	NA	NA	NA
BBG31323.1\|2870655_2871141_+	hypothetical protein	S4TTA5	Salmonella_phage	2.3e-08	25.0
BBG31324.1\|2870676_2871141_+	FOG: LysM repeat	A0A218M4K6	Erwinia_phage	2.9e-08	25.4
BBG31325.1\|2871128_2871581_+\|tail	phage virion morphogenesis (putative tail completion) protein	Q9ZXL2	Pseudomonas_virus	1.6e-24	43.8
BBG31326.1\|2871736_2873161_+	levansucrase	NA	NA	NA	NA
BBG31327.1\|2873294_2873987_+\|plate	phage baseplate assembly protein V	A0A2H4JFJ8	uncultured_Caudovirales_phage	2.4e-19	29.6
BBG31328.1\|2873993_2874335_+\|plate	phage baseplate assemblyprotein W	A0A077K8R5	Ralstonia_phage	8.5e-18	59.2
BBG31329.1\|2874331_2875204_+\|plate	baseplate J-like protein	F1BUP3	Erwinia_phage	5.4e-85	57.5
BBG31330.1\|2875063_2875249_-	uroporphyrinogen-III methylase	NA	NA	NA	NA
BBG31331.1\|2875196_2875811_+\|tail	phage tail protein I	A0A077KER5	Ralstonia_phage	2.3e-58	59.3
BBG31332.1\|2875814_2876972_+\|tail	phage-related tail fibre	A0A0M3ULH6	Salmonella_phage	9.5e-45	60.0
BBG31333.1\|2876973_2877549_+	SAM-dependent methyltransferases	NA	NA	NA	NA
BBG31334.1\|2877690_2878479_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	2.3e-122	79.2
BBG31335.1\|2878577_2879753_+\|tail	phage tail sheath protein FI	A0A077K9Y4	Ralstonia_phage	2.9e-113	56.2
BBG31336.1\|2879762_2880269_+\|tail	phage tail tube protein FII	A0A1S5NNH7	Burkholderia_phage	1.5e-39	52.1
BBG31337.1\|2880309_2880609_+	small-conductance mechanosensitive channel	NA	NA	NA	NA
BBG31338.1\|2880623_2880755_+	NMD protein affecting ribosome stability	E5E3U7	Burkholderia_phage	6.1e-09	73.0
BBG31339.1\|2880767_2883023_+\|tail	probable phage-related tail transmembrane protein	A4PE52	Ralstonia_virus	1.8e-79	36.2
BBG31340.1\|2882999_2883137_-	restriction endonuclease S subunits	NA	NA	NA	NA
BBG31341.1\|2883038_2883743_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
BBG31342.1\|2883747_2884227_+	phage protein U	A0A2H4JG54	uncultured_Caudovirales_phage	1.6e-33	54.5
BBG31343.1\|2884226_2885231_+	phage protein D	A0A2H4JAV0	uncultured_Caudovirales_phage	3.1e-76	45.4
BBG31344.1\|2891018_2891327_+	NTP pyrophosphohydrolases	NA	NA	NA	NA
BBG31345.1\|2891416_2891809_+	Kef-type K+ transport systems, membrane	NA	NA	NA	NA
BBG31346.1\|2891763_2891883_+	ribonuclease BN, putative	NA	NA	NA	NA
BBG31347.1\|2892175_2892325_+	hypothetical protein	NA	NA	NA	NA
BBG31348.1\|2892321_2892615_+\|tRNA	tRNA (guanine-N(7))-methyltransferase	NA	NA	NA	NA
BBG31349.1\|2892614_2893052_+\|tRNA	tRNA (guanine-N(7))-methyltransferase	NA	NA	NA	NA
BBG31350.1\|2893048_2895268_+	ATPase with chaperone activity, ATP-binding	F1BUS0	Erwinia_phage	4.3e-78	39.5
BBG31351.1\|2895261_2895531_-	signal transduction histidine kinase	NA	NA	NA	NA
BBG31352.1\|2895502_2895775_+	glutamate decarboxylase	A0A1J0GUZ1	Halomonas_phage	3.6e-11	40.4
BBG31353.1\|2896316_2897147_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	1.7e-56	44.8
BBG31354.1\|2897651_2897930_-	trafficking protein YggX	NA	NA	NA	NA
BBG31355.1\|2898017_2899127_-	A/G-specific DNA glycosylase	NA	NA	NA	NA
BBG31356.1\|2899202_2901467_-	uncharacterized protein	NA	NA	NA	NA
2899459:2899476	attR	NA	NA	NA	NA
BBG31357.1\|2901194_2901632_+	uncharacterized protein	NA	NA	NA	NA
BBG31358.1\|2901697_2902306_+	Imidazoleglycerol-phosphate dehydratase	NA	NA	NA	NA
BBG31359.1\|2902392_2903043_+	glutamine amidotransferase	NA	NA	NA	NA
BBG31360.1\|2903100_2903841_+	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	NA	NA	NA	NA
BBG31361.1\|2903865_2904639_+	imidazoleglycerol phosphate synthase, cyclase subunit	NA	NA	NA	NA
BBG31362.1\|2904743_2905352_-	uncharacterized protein conserved in bacteria	NA	NA	NA	NA
BBG31363.1\|2905377_2905683_-	imidazoleglycerol phosphate synthase, cyclase subunit	NA	NA	NA	NA
BBG31364.1\|2905685_2907059_-\|protease	predicted ATP-dependent serine protease	NA	NA	NA	NA
BBG31365.1\|2907138_2907642_-	hypothetical protein	NA	NA	NA	NA
BBG31366.1\|2907901_2908975_+	histidinol-phosphate aminotransferase	NA	NA	NA	NA
BBG31367.1\|2908971_2909385_+	hypothetical protein	NA	NA	NA	NA
BBG31368.1\|2909592_2911236_+	probable coenzyme A ligase	NA	NA	NA	NA
BBG31369.1\|2911563_2912856_-	permeases of the major facilitator	Q6JIH2	Burkholderia_virus	1.4e-41	32.4
BBG31370.1\|2920076_2920757_-	hypothetical protein	NA	NA	NA	NA
BBG31371.1\|2920874_2921411_-	anhydrase, family 3 protein	NA	NA	NA	NA
BBG31372.1\|2921383_2922790_-	sodium:neurotransmitter symporter	NA	NA	NA	NA
BBG31373.1\|2923064_2925119_+	Zn-dependent oligopeptidases	NA	NA	NA	NA
BBG31374.1\|2925255_2926098_-	5,10-methylene tetrahydrofolate reductase	NA	NA	NA	NA
BBG31375.1\|2926216_2926702_-	signal transduction histidine kinase	NA	NA	NA	NA
BBG31376.1\|2926933_2928496_+	endo polygalacturonase	NA	NA	NA	NA
BBG31377.1\|2928541_2929420_-	peptidase	A0A075BS18	Microcystis_phage	3.0e-14	39.7
BBG31378.1\|2929645_2929972_-	thioredoxin	NA	NA	NA	NA
BBG31379.1\|2929968_2930418_-	flavodoxins	A0A060AL80	Listeria_phage	2.7e-19	39.2
BBG31380.1\|2930574_2931624_-	ribonucleotide reductase, beta subunit	A0A059T7I4	Listeria_phage	1.0e-154	77.5
BBG31381.1\|2931724_2934013_-	ribonucleotide reductase, alpha subunit	A0A060AGL6	Listeria_phage	0.0e+00	70.2
BBG31382.1\|2934638_2935649_-	nucleoside phosphorylase	NA	NA	NA	NA
BBG31383.1\|2935790_2937176_-	amino acid transporters	NA	NA	NA	NA
BBG31384.1\|2937448_2938669_-	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	2.0e-122	55.4
BBG31385.1\|2937523_2938702_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: AP018933.1|BBG31311.1|2862525_2862975_+|NAD-dependent-aldehyde-dehydrogenases

Click the colored protein region to show detailed information

Acr_ID: AP018933.1|BBG31298.1|2851292_2851463_-|large-exoproteins

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

AP018933.1|BBG31311.1|2862525_2862975_+|NAD-dependent-aldehyde-dehydrogenases

2862525_2862975_+

149 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|33	0.41843971631205673	0.9463087248322147	0.9276315789473685

2829638-2938702

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
AP018933_1	Orphan	1.1\|585377\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585377-585408	32	2893488-2893519	0
AP018933_1	Orphan	1.2\|585437\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585437-585468	32	2888769-2888800	0
AP018933_1	Orphan	1.4\|585557\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585557-585588	32	2879890-2879859	0
AP018933_1	Orphan	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	2868364-2868333	1
AP018933_2	TypeI-F	2.7\|1056375\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056375-1056406	32	2893189-2893220	0
AP018933_2	TypeI-F	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	2879968-2879937	0
AP018933_2	TypeI-F	2.24\|1057396\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057396-1057427	32	2874516-2874547	1
AP018933_2	TypeI-F	2.26\|1057516\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057516-1057547	32	2878387-2878418	0
AP018933_2	TypeI-F	2.27\|1057576\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057576-1057607	32	2873988-2874019	0
AP018933_3	TypeI-F	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	2874912-2874881	1
AP018933_3	TypeI-F	3.19\|1067621\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067621-1067652	32	2869644-2869675	1

1. spacer 1.1|585377|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2893488-2893519, mismatch: 0

aagtgggtgagctgtgctgtcgtgcccatgaa	CRISPR spacer
aagtgggtgagctgtgctgtcgtgcccatgaa	Protospacer
********************************

2. spacer 1.2|585437|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2888769-2888800, mismatch: 0

ggcaaattctaagccagcagagcacttagaat	CRISPR spacer
ggcaaattctaagccagcagagcacttagaat	Protospacer
********************************

3. spacer 1.4|585557|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2879890-2879859, mismatch: 0

atgccgccaccgcgccattcttcggttttacg	CRISPR spacer
atgccgccaccgcgccattcttcggttttacg	Protospacer
********************************

4. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2868364-2868333, mismatch: 1

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
atcagtgacgcgaccgcttcctcgaccagaat	Protospacer
**.*****************************

5. spacer 2.7|1056375|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2893189-2893220, mismatch: 0

ccgtatcgagggcaacgcagcaggcaaccgct	CRISPR spacer
ccgtatcgagggcaacgcagcaggcaaccgct	Protospacer
********************************

6. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2879968-2879937, mismatch: 0

gcggcctccatcagcccgccacagctcactgt	CRISPR spacer
gcggcctccatcagcccgccacagctcactgt	Protospacer
********************************

7. spacer 2.24|1057396|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2874516-2874547, mismatch: 1

gcgaactgctgctgcgacagcacagcaatgag	CRISPR spacer
gcgaactgctgctgcgacagcacagcaacgag	Protospacer
****************************.***

8. spacer 2.26|1057516|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2878387-2878418, mismatch: 0

aagtacacggtgggaggtggtaagggttcaga	CRISPR spacer
aagtacacggtgggaggtggtaagggttcaga	Protospacer
********************************

9. spacer 2.27|1057576|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2873988-2874019, mismatch: 0

tcggtcatgtcgatgagtaaagcctcgggcaa	CRISPR spacer
tcggtcatgtcgatgagtaaagcctcgggcaa	Protospacer
********************************

10. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2874912-2874881, mismatch: 1

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
gtgacgcgatccgcgcagggaatgacgtcctc	Protospacer
*****************************.**

11. spacer 3.19|1067621|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to AP018933 position: 2869644-2869675, mismatch: 1

agcggccaagcccgtggacaaggacgacagcc	CRISPR spacer
agcggccaagcccgtggacaaggacgatagcc	Protospacer
***************************.****

AP018933.1|BBG31298.1|2851292_2851463_-|large-exoproteins

2851292_2851463_-

56 aa aa

2829638-2938702

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
AP018933_1	Orphan	1.1\|585377\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585377-585408	32	2893488-2893519	0
AP018933_1	Orphan	1.2\|585437\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585437-585468	32	2888769-2888800	0
AP018933_1	Orphan	1.4\|585557\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585557-585588	32	2879890-2879859	0
AP018933_1	Orphan	1.5\|585617\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	585617-585648	32	2868364-2868333	1
AP018933_2	TypeI-F	2.7\|1056375\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1056375-1056406	32	2893189-2893220	0
AP018933_2	TypeI-F	2.23\|1057336\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057336-1057367	32	2879968-2879937	0
AP018933_2	TypeI-F	2.24\|1057396\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057396-1057427	32	2874516-2874547	1
AP018933_2	TypeI-F	2.26\|1057516\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057516-1057547	32	2878387-2878418	0
AP018933_2	TypeI-F	2.27\|1057576\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1057576-1057607	32	2873988-2874019	0
AP018933_3	TypeI-F	3.10\|1067141\|32\|AP018933\|PILER-CR,CRISPRCasFinder,CRT	1067141-1067172	32	2874912-2874881	1
AP018933_3	TypeI-F	3.19\|1067621\|32\|AP018933\|CRISPRCasFinder,CRT,PILER-CR	1067621-1067652	32	2869644-2869675	1

1. spacer 1.1|585377|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2893488-2893519, mismatch: 0

aagtgggtgagctgtgctgtcgtgcccatgaa	CRISPR spacer
aagtgggtgagctgtgctgtcgtgcccatgaa	Protospacer
********************************

2. spacer 1.2|585437|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2888769-2888800, mismatch: 0

ggcaaattctaagccagcagagcacttagaat	CRISPR spacer
ggcaaattctaagccagcagagcacttagaat	Protospacer
********************************

3. spacer 1.4|585557|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2879890-2879859, mismatch: 0

atgccgccaccgcgccattcttcggttttacg	CRISPR spacer
atgccgccaccgcgccattcttcggttttacg	Protospacer
********************************

4. spacer 1.5|585617|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2868364-2868333, mismatch: 1

attagtgacgcgaccgcttcctcgaccagaat	CRISPR spacer
atcagtgacgcgaccgcttcctcgaccagaat	Protospacer
**.*****************************

5. spacer 2.7|1056375|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2893189-2893220, mismatch: 0

ccgtatcgagggcaacgcagcaggcaaccgct	CRISPR spacer
ccgtatcgagggcaacgcagcaggcaaccgct	Protospacer
********************************

6. spacer 2.23|1057336|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2879968-2879937, mismatch: 0

gcggcctccatcagcccgccacagctcactgt	CRISPR spacer
gcggcctccatcagcccgccacagctcactgt	Protospacer
********************************

7. spacer 2.24|1057396|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2874516-2874547, mismatch: 1

gcgaactgctgctgcgacagcacagcaatgag	CRISPR spacer
gcgaactgctgctgcgacagcacagcaacgag	Protospacer
****************************.***

8. spacer 2.26|1057516|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2878387-2878418, mismatch: 0

aagtacacggtgggaggtggtaagggttcaga	CRISPR spacer
aagtacacggtgggaggtggtaagggttcaga	Protospacer
********************************

9. spacer 2.27|1057576|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2873988-2874019, mismatch: 0

tcggtcatgtcgatgagtaaagcctcgggcaa	CRISPR spacer
tcggtcatgtcgatgagtaaagcctcgggcaa	Protospacer
********************************

10. spacer 3.10|1067141|32|AP018933|PILER-CR,CRISPRCasFinder,CRT matches to AP018933 position: 2874912-2874881, mismatch: 1

gtgacgcgatccgcgcagggaatgacgtcttc	CRISPR spacer
gtgacgcgatccgcgcagggaatgacgtcctc	Protospacer
*****************************.**

11. spacer 3.19|1067621|32|AP018933|CRISPRCasFinder,CRT,PILER-CR matches to AP018933 position: 2869644-2869675, mismatch: 1

agcggccaagcccgtggacaaggacgacagcc	CRISPR spacer
agcggccaagcccgtggacaaggacgatagcc	Protospacer
***************************.****

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP018933

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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