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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032637 Lactobacillus paracasei strain ZFM54 chromosome, complete genome 6 crisprs DinG,csa3,DEDDh,cas3,WYL,cas9,cas1,cas2,csn2,RT 0 9 6 0
CP032639 Lactobacillus paracasei strain ZFM54 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0
CP032638 Lactobacillus paracasei strain ZFM54 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP032637
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_1 50722-50828 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_2 72053-72173 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_3 1277947-1278055 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_4 1671151-1671295 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_5 2673923-2675146 TypeII NA
18 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032637_6 2770915-2771004 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP032637_5 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2673959-2673988 30 NC_004985 Lactobacillus acidophilus plasmid pLA106 DNA, complete sequence 257-286 0 1.0
CP032637_5 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2673959-2673988 30 NC_017466 Lactobacillus casei strain TISTR1341 plasmid pRCEID2.9, complete sequence 258-287 0 1.0
CP032637_5 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2673959-2673988 30 NC_013952 Lactobacillus paracasei TXW plasmid pTXW, complete sequence 1716-1745 0 1.0
CP032637_5 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674025-2674054 30 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 787988-788017 6 0.8
CP032637_5 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674025-2674054 30 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 170192-170221 7 0.767
CP032637_5 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674025-2674054 30 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1643071-1643100 7 0.767
CP032637_5 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674025-2674054 30 MG757157 Gordonia phage Flapper, complete genome 3335-3364 7 0.767
CP032637_5 5.3|2674091|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674091-2674120 30 MN693516 Marine virus AFVG_25M345, complete genome 20383-20412 7 0.767
CP032637_5 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674157-2674186 30 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 347900-347929 7 0.767
CP032637_5 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674157-2674186 30 NZ_CP016290 Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence 472321-472350 7 0.767
CP032637_5 5.9|2674487|30|CP032637|CRISPRCasFinder,CRT 2674487-2674516 30 NZ_CP049251 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed4, complete sequence 110306-110335 7 0.767
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MN497953 Mycobacterium phage GtownJaz, complete genome 25204-25233 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MG925341 Mycobacteriophage EpicPhail, complete genome 25203-25232 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KX808129 Mycobacterium phage Sabinator, complete genome 25201-25230 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MK359341 Mycobacterium phage GingkoMaracino, complete genome 25089-25118 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 JF704114 Mycobacterium phage Vix, complete genome 25285-25314 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MK279913 Mycobacterium phage PotatoSplit, complete genome 25203-25232 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MG757161 Mycobacterium phage LugYA, complete genome 25203-25232 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH536825 Mycobacterium phage Ollie, complete genome 25073-25102 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH020238 Mycobacterium phage Lilith, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH077583 Mycobacterium phage PGHhamlin, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH155864 Mycobacterium phage Beauxregard13, complete genome 25203-25232 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH727554 Mycobacterium phage MuchMore, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH338240 Mycobacterium phage Sabia, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MN813699 Mycobacterium phage P28Green, complete genome 25204-25233 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KM233455 Mycobacterium phage Farber, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 HM755814 Mycobacterium phage Wonder, complete genome 24652-24681 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KU578077 Mycobacterium phage Marie, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KT381277 Mycobacterium phage Wooldri, complete genome 25114-25143 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MK875800 Mycobacterium phage MoneyMay, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KX664448 Mycobacterium phage Watson, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KX507362 Mycobacterium phage Aglet, complete genome 25204-25233 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MN586048 Mycobacterium phage Fernando, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KU985091 Mycobacterium phage Hercules11, complete genome 25210-25239 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 NC_042310 Mycobacterium virus JHC117, complete genome 25201-25230 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH576949 Mycobacterium phage BreSam8, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KP027202 Mycobacterium phage Taurus, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH399776 Mycobacterium phage Grum1, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MN585969 Mycobacterium phage Dieselweasel, complete genome 25204-25233 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KU255188 Mycobacterium phage JenCasNa, complete genome 25202-25231 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KX458237 Mycobacterium phage Penny1, complete genome 25203-25232 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH536813 Mycobacterium phage AugsMagnumOpus, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MF185733 Mycobacterium phage StepMih, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MF185732 Mycobacterium phage Stagni, complete genome 25205-25234 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MK494096 Mycobacterium phage Mainiac, complete genome 25196-25225 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KU984914 Mycobacterium phage Malinsilva, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 JF704101 Mycobacterium virus Microwolf, complete genome 25204-25233 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KT359365 Mycobacterium phage DaHudson, complete genome 25195-25224 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 MH651179 Mycobacterium phage MadMarie, complete genome 25205-25234 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 KF279418 Mycobacterium phage Anubis, complete genome 25089-25118 8 0.733
CP032637_5 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674421-2674450 30 NC_028798 Mycobacterium phage MarQuardt, complete genome 25204-25233 8 0.733
CP032637_5 5.11|2674619|30|CP032637|CRISPRCasFinder,CRT,PILER-CR 2674619-2674648 30 NZ_CP034227 Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence 3216-3245 8 0.733
CP032637_5 5.18|2675081|30|CP032637|CRISPRCasFinder,CRT 2675081-2675110 30 NZ_CP016024 Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence 227967-227996 8 0.733
CP032637_5 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674157-2674186 30 NC_021920 Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence 44607-44636 9 0.7
CP032637_5 5.6|2674289|30|CP032637|PILER-CR,CRISPRCasFinder,CRT 2674289-2674318 30 KY653117 Staphylococcus phage IME1323_01, complete genome 20139-20168 9 0.7
CP032637_5 5.11|2674619|30|CP032637|CRISPRCasFinder,CRT,PILER-CR 2674619-2674648 30 MN693950 Marine virus AFVG_250M300, complete genome 1356-1385 10 0.667

1. spacer 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_004985 (Lactobacillus acidophilus plasmid pLA106 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcttcgctccctaaaaatcaaacccgcc	CRISPR spacer
tcgcttcgctccctaaaaatcaaacccgcc	Protospacer
******************************

2. spacer 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_017466 (Lactobacillus casei strain TISTR1341 plasmid pRCEID2.9, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcttcgctccctaaaaatcaaacccgcc	CRISPR spacer
tcgcttcgctccctaaaaatcaaacccgcc	Protospacer
******************************

3. spacer 5.1|2673959|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_013952 (Lactobacillus paracasei TXW plasmid pTXW, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcttcgctccctaaaaatcaaacccgcc	CRISPR spacer
tcgcttcgctccctaaaaatcaaacccgcc	Protospacer
******************************

4. spacer 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 6, identity: 0.8

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
caatccggcactggttcaacatgcggcacg	Protospacer
*.* .****** *.***************.

5. spacer 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
ccacggggcgcggattcgacatgcggcacg	Protospacer
* *   ***.*******.***********.

6. spacer 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
ccacggggcgcggattcgacatgcggcacg	Protospacer
* *   ***.*******.***********.

7. spacer 5.2|2674025|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MG757157 (Gordonia phage Flapper, complete genome) position: , mismatch: 7, identity: 0.767

cgagtcggcacggattcaacatgcggcaca	CRISPR spacer
catgtcggtacggattcaacgtgcgggtcg	Protospacer
*. *****.***********.*****  *.

8. spacer 5.3|2674091|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MN693516 (Marine virus AFVG_25M345, complete genome) position: , mismatch: 7, identity: 0.767

atacaaaaaaaatcatacagcctgcatcac-	CRISPR spacer
ttacaaaaaatatcttacagcctg-gttatg	Protospacer
 ********* *** ********* .*.*. 

9. spacer 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
cttcgacttcgcgaacatcattcaggctaa	Protospacer
**  .  ********* *******.*****

10. spacer 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
cttcgacttcgcgaacatcattcaggctaa	Protospacer
**  .  ********* *******.*****

11. spacer 5.9|2674487|30|CP032637|CRISPRCasFinder,CRT matches to NZ_CP049251 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

ccctttcgccgccatctttgatcgcccacg	CRISPR spacer
cattttcgccgccatcgttcatcgccatct	Protospacer
* .************* ** ******  * 

12. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MN497953 (Mycobacterium phage GtownJaz, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

13. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MG925341 (Mycobacteriophage EpicPhail, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

14. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KX808129 (Mycobacterium phage Sabinator, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

15. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MK359341 (Mycobacterium phage GingkoMaracino, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

16. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to JF704114 (Mycobacterium phage Vix, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

17. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MK279913 (Mycobacterium phage PotatoSplit, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

18. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MG757161 (Mycobacterium phage LugYA, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

19. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH536825 (Mycobacterium phage Ollie, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

20. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH020238 (Mycobacterium phage Lilith, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

21. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH077583 (Mycobacterium phage PGHhamlin, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

22. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH155864 (Mycobacterium phage Beauxregard13, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

23. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH727554 (Mycobacterium phage MuchMore, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

24. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH338240 (Mycobacterium phage Sabia, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

25. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MN813699 (Mycobacterium phage P28Green, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

26. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KM233455 (Mycobacterium phage Farber, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

27. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to HM755814 (Mycobacterium phage Wonder, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

28. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KU578077 (Mycobacterium phage Marie, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

29. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KT381277 (Mycobacterium phage Wooldri, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

30. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MK875800 (Mycobacterium phage MoneyMay, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

31. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KX664448 (Mycobacterium phage Watson, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

32. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KX507362 (Mycobacterium phage Aglet, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

33. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MN586048 (Mycobacterium phage Fernando, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

34. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KU985091 (Mycobacterium phage Hercules11, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

35. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_042310 (Mycobacterium virus JHC117, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

36. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH576949 (Mycobacterium phage BreSam8, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

37. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KP027202 (Mycobacterium phage Taurus, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

38. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH399776 (Mycobacterium phage Grum1, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

39. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MN585969 (Mycobacterium phage Dieselweasel, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

40. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KU255188 (Mycobacterium phage JenCasNa, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

41. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KX458237 (Mycobacterium phage Penny1, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

42. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH536813 (Mycobacterium phage AugsMagnumOpus, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

43. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MF185733 (Mycobacterium phage StepMih, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

44. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MF185732 (Mycobacterium phage Stagni, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

45. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MK494096 (Mycobacterium phage Mainiac, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

46. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KU984914 (Mycobacterium phage Malinsilva, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

47. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to JF704101 (Mycobacterium virus Microwolf, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

48. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KT359365 (Mycobacterium phage DaHudson, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

49. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to MH651179 (Mycobacterium phage MadMarie, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

50. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KF279418 (Mycobacterium phage Anubis, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

51. spacer 5.8|2674421|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_028798 (Mycobacterium phage MarQuardt, complete genome) position: , mismatch: 8, identity: 0.733

agaactggacgccgaacgcttggacacgcc	CRISPR spacer
actgttggacgccgaacgcttcgacgcgat	Protospacer
*  ..**************** ***.** .

52. spacer 5.11|2674619|30|CP032637|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034227 (Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence) position: , mismatch: 8, identity: 0.733

aagccgatgatataaagaaagacgcccctt	CRISPR spacer
tatgagcggatataaaaaaagacgccccta	Protospacer
 *   *  ********.************ 

53. spacer 5.18|2675081|30|CP032637|CRISPRCasFinder,CRT matches to NZ_CP016024 (Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence) position: , mismatch: 8, identity: 0.733

gacgatctcgcacatgctcagtgatatgcg	CRISPR spacer
ccgtttttcgcacatgctcagtggtatggg	Protospacer
     *.****************.**** *

54. spacer 5.4|2674157|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to NC_021920 (Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence) position: , mismatch: 9, identity: 0.7

ctaaacgttcgcgaacctcattcaagctaa	CRISPR spacer
agccgcgttcgcgaacctcactcgagcttc	Protospacer
    .***************.**.****  

55. spacer 5.6|2674289|30|CP032637|PILER-CR,CRISPRCasFinder,CRT matches to KY653117 (Staphylococcus phage IME1323_01, complete genome) position: , mismatch: 9, identity: 0.7

gtgttagacttagatgtggatgttgccccg	CRISPR spacer
aatgtagacttagatgaggatgtagccaaa	Protospacer
.   ************ ****** ***  .

56. spacer 5.11|2674619|30|CP032637|CRISPRCasFinder,CRT,PILER-CR matches to MN693950 (Marine virus AFVG_250M300, complete genome) position: , mismatch: 10, identity: 0.667

aagccgatgatataaagaaagacgcccctt	CRISPR spacer
cagccgatgataaaaagaaagaaaaagaag	Protospacer
 *********** ********* .      

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 200 : 47754 60 Lactobacillus_phage(68.29%) capsid,protease,integrase,portal,holin,tail,terminase,transposase,head attL 2609:2622|attR 55389:55402
DBSCAN-SWA_2 693790 : 759975 87 Lactobacillus_phage(79.03%) capsid,integrase,holin,portal,tail,transposase,terminase,head attL 716019:716078|attR 760100:760177
DBSCAN-SWA_3 1300908 : 1384503 85 Lactobacillus_phage(34.48%) holin,transposase,protease NA
DBSCAN-SWA_4 1834818 : 1883600 53 Burkholderia_virus(20.0%) transposase,protease NA
DBSCAN-SWA_5 2476257 : 2524998 58 Bacillus_phage(40.0%) bacteriocin,transposase,protease NA
DBSCAN-SWA_6 2779722 : 2841000 60 Listeria_phage(18.18%) transposase,integrase attL 2778848:2778867|attR 2780758:2780777
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage