CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	0 crisprs	RT,DEDDh	1
CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	0 crisprs	DEDDh	0
CP032684	Rhizobium sp. CCGE531 chromosome, complete genome	0 crisprs	WYL,csa3,cas3,RT	5
CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	0 crisprs	csa3	0
CP032688	Rhizobium sp. CCGE531 plasmid pRCCGE531a, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

269851 : 394482

Stx2-converting_phage(30.77%)

integrase,transposase

attL 340295:340314|attR 392465:392484

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG70483.1\|269851_271354_+	SDR family oxidoreductase	L7Y2R3	Megavirus	3.3e-05	35.1
AYG70484.1\|271600_272665_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
AYG70747.1\|272834_273383_-	hypothetical protein	A0A0H3UZE4	Geobacillus_virus	4.5e-37	46.1
AYG70485.1\|273716_275282_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	4.1e-59	33.3
AYG70486.1\|275336_275615_-	hypothetical protein	S5VXZ8	Leptospira_phage	1.4e-07	45.3
AYG70487.1\|275568_277659_-	recombinase family protein	A0A0U4IB69	Exiguobacterium_phage	7.6e-08	22.2
AYG70488.1\|277655_278072_-	hypothetical protein	NA	NA	NA	NA
AYG70489.1\|277992_278301_-	hypothetical protein	NA	NA	NA	NA
AYG70748.1\|278281_278731_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-07	48.6
AYG70490.1\|279597_281679_+	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	2.8e-18	30.5
AYG70491.1\|281873_282839_-	hypothetical protein	NA	NA	NA	NA
AYG70492.1\|283397_283586_-	hypothetical protein	NA	NA	NA	NA
AYG70493.1\|283837_284812_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYG70749.1\|285421_286315_+	nitrogenase iron protein	NA	NA	NA	NA
AYG70494.1\|286418_287921_+	nitrogenase molybdenum-iron protein alpha chain	NA	NA	NA	NA
AYG70495.1\|288046_289588_+	nitrogenase molybdenum-iron protein subunit beta	NA	NA	NA	NA
AYG70496.1\|289619_291146_+	nitrogenase iron-molybdenum cofactor biosynthesis protein NifE	NA	NA	NA	NA
AYG70497.1\|291145_292537_+	nitrogenase iron-molybdenum cofactor biosynthesis protein NifN	NA	NA	NA	NA
AYG70498.1\|292502_293003_+	nitrogen fixation protein NifX	NA	NA	NA	NA
AYG70499.1\|293015_293504_+	NifX-associated nitrogen fixation protein	NA	NA	NA	NA
AYG70500.1\|293528_293732_+	hypothetical protein	NA	NA	NA	NA
AYG70501.1\|293728_294058_+	ferredoxin III, nif-specific	NA	NA	NA	NA
AYG70502.1\|294073_294337_+	hypothetical protein	NA	NA	NA	NA
AYG70503.1\|294697_295711_+	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
AYG70504.1\|296003_296717_-	transcriptional regulator	NA	NA	NA	NA
AYG70750.1\|297304_297970_+	hypothetical protein	NA	NA	NA	NA
AYG70505.1\|298317_299301_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AYG70751.1\|299541_300816_+	diaminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	1.5e-19	24.5
AYG70506.1\|301589_302483_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYG70507.1\|303544_303922_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG70508.1\|303918_304266_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	9.2e-28	51.4
AYG70509.1\|307847_308027_-	hypothetical protein	NA	NA	NA	NA
AYG70510.1\|308550_308784_-	hypothetical protein	NA	NA	NA	NA
AYG70511.1\|310284_310638_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	8.2e-32	55.6
AYG70512.1\|311595_313137_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-145	55.7
AYG70752.1\|315081_315951_-	cupin-like domain-containing protein	NA	NA	NA	NA
AYG70513.1\|316611_316851_-	hypothetical protein	NA	NA	NA	NA
AYG70514.1\|318858_319191_+\|transposase	transposase	NA	NA	NA	NA
AYG70753.1\|319098_320955_-	recombinase family protein	NA	NA	NA	NA
AYG70515.1\|320957_321221_-	hypothetical protein	NA	NA	NA	NA
AYG70516.1\|321247_321709_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYG70517.1\|321832_322078_-	hypothetical protein	NA	NA	NA	NA
AYG70518.1\|322173_322359_+	hypothetical protein	NA	NA	NA	NA
AYG70519.1\|322417_324070_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-81	39.6
AYG70520.1\|324342_325590_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
AYG70521.1\|326040_326466_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	5.8e-16	33.8
AYG70522.1\|326562_327426_+\|integrase	integrase	S5W9T9	Leptospira_phage	1.5e-31	32.6
AYG70523.1\|327430_328618_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AYG70524.1\|329121_330657_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.6e-116	43.5
AYG70525.1\|330670_331426_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	5.6e-54	45.0
AYG70526.1\|332956_334102_-	lysine 2,3-aminomutase	NA	NA	NA	NA
AYG70527.1\|335971_337149_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.2e-90	64.6
AYG70528.1\|337963_338341_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG70529.1\|338337_338685_+\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	9.2e-28	51.4
AYG70754.1\|338752_340411_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-103	43.8
340295:340314	attL	NA	NA	NA	NA
AYG70530.1\|340391_340625_-	hypothetical protein	NA	NA	NA	NA
AYG70531.1\|340804_341650_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.2e-38	35.1
AYG70532.1\|341728_343012_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
AYG70533.1\|343639_344671_+	peptidase C45	NA	NA	NA	NA
AYG70534.1\|347632_348823_-	aminopeptidase P family protein	NA	NA	NA	NA
AYG70535.1\|349152_349347_-	hypothetical protein	NA	NA	NA	NA
AYG70536.1\|349370_350474_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG70537.1\|350611_351706_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-27	38.4
AYG70538.1\|351724_353497_+	ABC transporter permease subunit	NA	NA	NA	NA
AYG70755.1\|353878_354763_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYG70756.1\|354997_356323_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AYG70539.1\|356335_356872_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AYG70540.1\|357044_358223_+	M24 family metallopeptidase	NA	NA	NA	NA
AYG70541.1\|358404_358872_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYG70542.1\|359013_360198_+	amidohydrolase	NA	NA	NA	NA
AYG70543.1\|360227_361217_+	hydroxyectoine utilization dehydratase EutB	NA	NA	NA	NA
AYG70544.1\|361213_362203_+	ectoine utilization protein EutC	NA	NA	NA	NA
AYG70545.1\|362324_363041_+	hypothetical protein	NA	NA	NA	NA
AYG70546.1\|363071_364253_+	M24 family metallopeptidase	NA	NA	NA	NA
AYG70547.1\|364371_365427_+	peptidase C45	NA	NA	NA	NA
AYG70548.1\|365836_367240_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	6.0e-17	28.9
AYG70549.1\|367378_368788_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AYG70550.1\|368892_369591_+	CoA transferase subunit A	NA	NA	NA	NA
AYG70551.1\|369607_370237_+	CoA transferase subunit B	NA	NA	NA	NA
AYG70552.1\|370307_371441_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
AYG70553.1\|371453_371951_+	UPF0262 family protein	NA	NA	NA	NA
AYG70757.1\|372085_373441_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AYG70554.1\|376946_377165_+	MarR family transcriptional regulator	NA	NA	NA	NA
AYG70555.1\|377292_378894_+	flavin monoamine oxidase family protein	NA	NA	NA	NA
AYG70556.1\|378927_379329_+	cytochrome c	NA	NA	NA	NA
AYG70557.1\|380833_382084_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
AYG70558.1\|382135_382369_+	hypothetical protein	NA	NA	NA	NA
AYG70559.1\|382602_383892_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
AYG70560.1\|384168_384639_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG70561.1\|384897_386136_+\|integrase	integrase	A0A1B1P7C7	Bacillus_phage	3.2e-06	31.0
AYG70562.1\|386132_387065_+\|integrase	integrase	NA	NA	NA	NA
AYG70563.1\|387061_388069_+\|integrase	integrase	A0A0K2CP59	Brevibacillus_phage	3.0e-10	24.2
AYG70564.1\|388286_389165_+\|integrase	integrase	S5W9T9	Leptospira_phage	2.4e-32	31.1
AYG70565.1\|389172_390369_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AYG70566.1\|391021_392596_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.6e-74	34.6
392465:392484	attR	NA	NA	NA	NA
AYG70567.1\|392592_393156_+	YecA family protein	NA	NA	NA	NA
AYG70568.1\|393336_394482_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032684

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1705914 : 1719490

uncultured_Mediterranean_phage(90.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG68150.1\|1705914_1706928_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	3.5e-27	44.3
AYG68151.1\|1706998_1707796_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.3e-32	36.4
AYG68152.1\|1707833_1708526_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.8e-38	45.9
AYG66015.1\|1708559_1708751_+	hypothetical protein	NA	NA	NA	NA
AYG66016.1\|1708806_1709022_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	3.8e-08	55.6
AYG66017.1\|1709077_1709779_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
AYG66018.1\|1709775_1710603_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	4.9e-51	46.5
AYG66019.1\|1710702_1711986_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.0e-95	45.3
AYG66020.1\|1712001_1712766_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.5e-25	31.3
AYG66021.1\|1712770_1713424_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.4e-16	34.8
AYG66022.1\|1713593_1715282_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	3.3e-14	35.4
AYG68153.1\|1715360_1716233_-	ATP-binding protein	NA	NA	NA	NA
AYG66023.1\|1716439_1716787_+	preprotein translocase subunit YajC	NA	NA	NA	NA
AYG66024.1\|1716946_1719490_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.4e-58	48.2

DBSCAN-SWA_2

1796977 : 1846339

Leptospira_phage(12.5%)

transposase,tRNA,integrase

attL 1797019:1797033|attR 1851547:1851561

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG66085.1\|1796977_1797361_+\|transposase	transposase	NA	NA	NA	NA
1797019:1797033	attL	NA	NA	NA	NA
AYG66086.1\|1797357_1797702_+\|transposase	transposase	S5WJH4	Leptospira_phage	2.1e-08	36.8
AYG66087.1\|1797777_1799376_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.7e-50	32.6
AYG66088.1\|1799858_1800650_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYG66089.1\|1800775_1802395_-	pyridoxal-phosphate dependent enzyme	A0A1X9I5F1	Streptococcus_phage	1.3e-20	29.2
AYG66090.1\|1802418_1803300_-	GHMP kinase	NA	NA	NA	NA
AYG66091.1\|1803853_1804861_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
AYG66092.1\|1804857_1805202_+	conjugal transfer protein TrbC	NA	NA	NA	NA
AYG66093.1\|1805201_1805483_+	conjugal transfer protein	NA	NA	NA	NA
AYG66094.1\|1805492_1807997_+	conjugal transfer protein TrbE	NA	NA	NA	NA
AYG66095.1\|1807993_1808764_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
AYG66096.1\|1808777_1809095_+	hypothetical protein	NA	NA	NA	NA
AYG66097.1\|1809091_1810447_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
AYG66098.1\|1810443_1811133_+	conjugal transfer protein TrbF	NA	NA	NA	NA
AYG68162.1\|1811153_1812194_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
AYG66099.1\|1812190_1813387_+	TrbI/VirB10 family protein	NA	NA	NA	NA
AYG66100.1\|1813383_1813638_+	DUF2274 domain-containing protein	NA	NA	NA	NA
AYG68163.1\|1813708_1816831_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AYG66101.1\|1816827_1818690_-	hypothetical protein	NA	NA	NA	NA
AYG68164.1\|1818679_1819846_-	hypothetical protein	NA	NA	NA	NA
AYG66102.1\|1819957_1823356_-	ATP-dependent endonuclease	NA	NA	NA	NA
AYG68165.1\|1823355_1826010_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
AYG66103.1\|1826176_1826620_-	hypothetical protein	NA	NA	NA	NA
AYG66104.1\|1826616_1827789_-	ThiF family adenylyltransferase	NA	NA	NA	NA
AYG66105.1\|1827763_1828519_-	hypothetical protein	NA	NA	NA	NA
AYG66106.1\|1828600_1832002_-	ImmA/IrrE family metallo-endopeptidase	A7KV33	Bacillus_phage	4.6e-47	26.6
AYG66107.1\|1832003_1832588_-	hypothetical protein	NA	NA	NA	NA
AYG66108.1\|1832584_1833436_-	DNA-binding response regulator	NA	NA	NA	NA
AYG66109.1\|1833567_1834101_-\|tRNA	methionyl-tRNA formyltransferase-like protein	NA	NA	NA	NA
AYG66110.1\|1834401_1838469_+	restriction endonuclease	A0A1B1IUC6	uncultured_Mediterranean_phage	3.2e-47	24.5
AYG66111.1\|1838834_1840487_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-80	39.4
AYG66112.1\|1840549_1840903_-\|transposase	transposase	NA	NA	NA	NA
AYG66113.1\|1840899_1841343_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AYG66114.1\|1841604_1841784_+	hypothetical protein	NA	NA	NA	NA
AYG68166.1\|1841795_1843043_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA
AYG68167.1\|1843068_1843851_-	DUF5131 family protein	A0A2P1A0W3	Gordonia_phage	3.3e-49	45.1
AYG66115.1\|1843901_1844279_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYG66116.1\|1844283_1844649_-	addiction module toxin RelE	NA	NA	NA	NA
AYG66117.1\|1844645_1845089_-	nuclease	NA	NA	NA	NA
AYG66118.1\|1845085_1846339_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	5.3e-158	65.1
1851547:1851561	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1871334 : 1923416

uncultured_Mediterranean_phage(21.43%)

transposase,integrase,protease

attL 1852386:1852402|attR 1912919:1912935

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1852386:1852402	attL	NA	NA	NA	NA
AYG66128.1\|1871334_1871754_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	2.4e-06	47.8
AYG66129.1\|1871734_1872043_+	hypothetical protein	NA	NA	NA	NA
AYG66130.1\|1871963_1872380_+	hypothetical protein	NA	NA	NA	NA
AYG66131.1\|1872376_1874467_+	recombinase family protein	NA	NA	NA	NA
AYG66132.1\|1874420_1874699_+	hypothetical protein	S5VXZ8	Leptospira_phage	2.1e-06	41.5
AYG66133.1\|1874752_1876339_+\|transposase	IS66 family transposase	S5VTP8	Leptospira_phage	6.1e-26	38.1
AYG66134.1\|1876862_1878104_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	3.5e-162	67.1
AYG66135.1\|1879008_1879845_-	type I methionyl aminopeptidase	NA	NA	NA	NA
AYG66136.1\|1879847_1880597_-	DNA/RNA nuclease SfsA	NA	NA	NA	NA
AYG66137.1\|1880609_1882457_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AYG66138.1\|1882617_1883070_+	hypothetical protein	NA	NA	NA	NA
AYG66139.1\|1883292_1884510_+	LL-diaminopimelate aminotransferase	NA	NA	NA	NA
AYG66140.1\|1884567_1885887_+	homoserine dehydrogenase	NA	NA	NA	NA
AYG68169.1\|1885944_1887747_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.1e-54	28.8
AYG66141.1\|1888534_1889329_-	hypothetical protein	NA	NA	NA	NA
AYG66142.1\|1889533_1889974_-	lactoylglutathione lyase	NA	NA	NA	NA
AYG66143.1\|1890172_1890751_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.5e-06	36.9
AYG66144.1\|1890752_1891271_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	3.5e-07	31.7
AYG66145.1\|1891692_1891998_+	NADH-ubiquinone oxidoreductase	NA	NA	NA	NA
AYG66146.1\|1893079_1893853_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-31	38.9
AYG66147.1\|1893872_1895027_-	amino acid ABC transporter permease	NA	NA	NA	NA
AYG66148.1\|1895028_1896222_-	amino acid ABC transporter permease	NA	NA	NA	NA
AYG66149.1\|1896317_1897343_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.9e-81	43.1
AYG66150.1\|1897715_1898906_+	cystathionine beta-lyase	NA	NA	NA	NA
AYG66151.1\|1898906_1900070_-	salicylate hydroxylase	NA	NA	NA	NA
AYG66152.1\|1900098_1900344_-	zinc-finger domain-containing protein	NA	NA	NA	NA
AYG68170.1\|1900564_1901365_+	alpha/beta hydrolase	NA	NA	NA	NA
AYG68171.1\|1901577_1902378_-	enoyl-CoA hydratase	NA	NA	NA	NA
AYG66153.1\|1902454_1903318_+	serine O-acetyltransferase	NA	NA	NA	NA
AYG66154.1\|1903443_1903647_+	DUF3126 family protein	NA	NA	NA	NA
AYG66155.1\|1903998_1904364_+	phasin family protein	NA	NA	NA	NA
AYG66156.1\|1904652_1905006_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	7.7e-14	45.1
AYG66157.1\|1905016_1907548_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.8e-174	42.5
AYG66158.1\|1907657_1908086_-	HIT family protein	NA	NA	NA	NA
AYG66159.1\|1908127_1909315_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYG66160.1\|1909438_1910158_-	glycerophosphodiester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	5.6e-11	26.6
AYG66161.1\|1910157_1910625_-	RidA family protein	NA	NA	NA	NA
AYG66162.1\|1910760_1911588_+	DUF1849 family protein	NA	NA	NA	NA
AYG66163.1\|1911810_1912890_+	toxic anion resistance protein	H6X3X9	Enterobacteria_phage	1.9e-10	22.1
AYG66164.1\|1912895_1914470_+	VWA domain-containing protein	NA	NA	NA	NA
1912919:1912935	attR	NA	NA	NA	NA
AYG66165.1\|1914579_1915197_+	5-bromo-4-chloroindolyl phosphate hydrolase	NA	NA	NA	NA
AYG66166.1\|1915196_1916303_+	hypothetical protein	NA	NA	NA	NA
AYG66167.1\|1916491_1917259_+	30S ribosomal protein S2	NA	NA	NA	NA
AYG66168.1\|1917635_1918562_+	elongation factor Ts	NA	NA	NA	NA
AYG66169.1\|1918696_1919416_+	UMP kinase	NA	NA	NA	NA
AYG66170.1\|1919471_1920032_+	ribosome recycling factor	NA	NA	NA	NA
AYG66171.1\|1920141_1920885_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	6.8e-20	41.1
AYG66172.1\|1920884_1921718_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AYG66173.1\|1921742_1923416_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_4

2603806 : 2611777

uncultured_Caudovirales_phage(42.86%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG66759.1\|2603806_2604292_-	hypothetical protein	W6EKF5	Rhizobium_phage	1.1e-29	45.1
AYG66760.1\|2604295_2604727_-	hypothetical protein	NA	NA	NA	NA
AYG66761.1\|2604763_2605156_-	HK97 gp10 family phage protein	NA	NA	NA	NA
AYG66762.1\|2605176_2605404_-	hypothetical protein	NA	NA	NA	NA
AYG66763.1\|2605400_2605757_-	hypothetical protein	NA	NA	NA	NA
AYG66764.1\|2605756_2606254_-	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	2.3e-16	38.3
AYG66765.1\|2606326_2607298_-	DUF2184 domain-containing protein	A0A2H4J526	uncultured_Caudovirales_phage	1.5e-131	71.0
AYG66766.1\|2607301_2607772_-	hypothetical protein	A0A2H4J1G1	uncultured_Caudovirales_phage	2.8e-35	57.1
AYG66767.1\|2607799_2608915_-	DUF2213 domain-containing protein	A0A2R3UA67	Siphoviridae_environmental_samples	2.2e-67	40.7
AYG66768.1\|2609017_2610358_-	DUF1073 domain-containing protein	L7TRA1	Rhizobium_phage	2.6e-118	51.1
AYG68233.1\|2610406_2611777_-\|terminase	terminase	H9C0U8	Aeromonas_phage	8.5e-93	44.5

DBSCAN-SWA_5

2716404 : 2778017

Roseobacter_phage(12.5%)

protease,holin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYG66864.1\|2716404_2716881_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
AYG66865.1\|2717093_2718251_+	hypothetical protein	NA	NA	NA	NA
AYG66866.1\|2718336_2718594_-	hypothetical protein	NA	NA	NA	NA
AYG66867.1\|2718768_2719680_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA
AYG66868.1\|2719872_2720151_+	hypothetical protein	NA	NA	NA	NA
AYG66869.1\|2720297_2720483_+	DUF1059 domain-containing protein	NA	NA	NA	NA
AYG66870.1\|2720610_2721867_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A1B0V011	Roseobacter_phage	1.1e-49	47.0
AYG66871.1\|2721863_2722499_-	CoA pyrophosphatase	NA	NA	NA	NA
AYG66872.1\|2722495_2723119_-	DUF1285 domain-containing protein	NA	NA	NA	NA
AYG66873.1\|2723286_2724300_+	MoxR family ATPase	NA	NA	NA	NA
AYG66874.1\|2724326_2725247_+	DUF58 domain-containing protein	NA	NA	NA	NA
AYG66875.1\|2725243_2728069_+	DUF4159 domain-containing protein	NA	NA	NA	NA
AYG66876.1\|2728070_2730143_+	hypothetical protein	NA	NA	NA	NA
AYG68246.1\|2730145_2730571_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYG66877.1\|2730713_2731286_-	N-acetyltransferase	NA	NA	NA	NA
AYG66878.1\|2731634_2732624_+	glutathione S-transferase family protein	NA	NA	NA	NA
AYG66879.1\|2732639_2733131_-	NUDIX domain-containing protein	NA	NA	NA	NA
AYG68247.1\|2733181_2734120_+	metallophosphoesterase	NA	NA	NA	NA
AYG66880.1\|2734212_2734779_+	hypothetical protein	NA	NA	NA	NA
AYG66881.1\|2734987_2735500_+	RNA polymerase sigma factor	NA	NA	NA	NA
AYG66882.1\|2735512_2736346_+	anti-sigma factor	NA	NA	NA	NA
AYG66883.1\|2736444_2736648_+	hypothetical protein	NA	NA	NA	NA
AYG66884.1\|2736895_2738740_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-31	27.0
AYG66885.1\|2738813_2740520_-	2-isopropylmalate synthase	NA	NA	NA	NA
AYG68248.1\|2740848_2742033_-	benzoate transporter BenE	NA	NA	NA	NA
AYG66886.1\|2742223_2743009_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AYG68249.1\|2743031_2744216_+	MFS transporter	NA	NA	NA	NA
AYG66887.1\|2744181_2744565_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
AYG66888.1\|2744786_2745374_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	4.4e-30	37.8
AYG68250.1\|2745606_2746416_+	DUF2076 domain-containing protein	NA	NA	NA	NA
AYG66889.1\|2746472_2746937_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.0e-30	52.0
AYG68251.1\|2746937_2747852_-	cation transporter	NA	NA	NA	NA
AYG68252.1\|2748327_2748996_+	5,6-dimethylbenzimidazole synthase	NA	NA	NA	NA
AYG66890.1\|2749035_2749671_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
AYG68253.1\|2749790_2750594_-	TIGR02117 family protein	NA	NA	NA	NA
AYG66891.1\|2750646_2752818_-	anthranilate synthase	NA	NA	NA	NA
AYG66892.1\|2753445_2753985_+	hypothetical protein	NA	NA	NA	NA
AYG66893.1\|2753985_2754456_+	hypothetical protein	NA	NA	NA	NA
AYG66894.1\|2754645_2756166_-	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	3.2e-32	23.0
AYG66895.1\|2756582_2758814_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
AYG66896.1\|2759089_2759932_+	extensin	NA	NA	NA	NA
AYG66897.1\|2759988_2760834_-	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA
AYG66898.1\|2761010_2762690_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
AYG66899.1\|2762856_2763366_+	TIGR00645 family protein	NA	NA	NA	NA
AYG66900.1\|2763380_2764331_-	hypothetical protein	NA	NA	NA	NA
AYG68254.1\|2764887_2765619_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AYG66901.1\|2765775_2766915_-	DUF2333 family protein	NA	NA	NA	NA
AYG66902.1\|2767113_2768151_-	hypothetical protein	NA	NA	NA	NA
AYG66903.1\|2768326_2768713_-	cytochrome c family protein	NA	NA	NA	NA
AYG66904.1\|2768772_2769354_-	thymidine kinase	A0A023W530	Serratia_phage	2.1e-53	51.6
AYG66905.1\|2769584_2770541_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AYG66906.1\|2770709_2771567_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AYG66907.1\|2771563_2772613_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.1e-21	32.3
AYG66908.1\|2772648_2773140_+	HugZ family protein	NA	NA	NA	NA
AYG66909.1\|2773507_2773825_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AYG66910.1\|2774189_2775518_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AYG66911.1\|2775810_2776740_+\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	2.6e-24	32.8
AYG68255.1\|2776778_2778017_-\|transposase	IS4 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032687

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032684

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection