CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP032746	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed2, complete sequence	0 crisprs	RT	0	0
CP032750	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed6, complete sequence	0 crisprs	csa3	0	0
CP032748	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed4, complete sequence	0 crisprs	NA	0	0
CP032749	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed5, complete sequence	0 crisprs	NA	0	0
CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	0 crisprs	NA	0	1
CP032747	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed3, complete sequence	0 crisprs	csa3	0	0
CP032744	Lactobacillus paraplantarum strain DSM 10667 chromosome, complete genome	1 crisprs	csa3,DinG,cas3,DEDDh,WYL	1	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17722 : 58038

Lactobacillus_phage(20.0%)

protease,transposase,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ40191.1\|17722_18358_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ40192.1\|18638_18764_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AYJ40193.1\|19306_21469_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	3.4e-104	47.1
AYJ40194.1\|21626_21929_+	hypothetical protein	NA	NA	NA	NA
AYJ40195.1\|21959_22589_+	hypothetical protein	NA	NA	NA	NA
AYJ40196.1\|22664_23630_+	DUF3991 domain-containing protein	NA	NA	NA	NA
AYJ40197.1\|23626_23821_+	hypothetical protein	NA	NA	NA	NA
AYJ40198.1\|23823_24429_+	hypothetical protein	NA	NA	NA	NA
AYJ40199.1\|24431_26216_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	3.0e-82	33.7
AYJ40200.1\|26282_26597_+	hypothetical protein	NA	NA	NA	NA
AYJ40201.1\|26692_28813_+	hypothetical protein	NA	NA	NA	NA
AYJ40202.1\|28822_29602_+	sortase	NA	NA	NA	NA
AYJ40203.1\|29630_32570_+	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
AYJ40204.1\|32646_32943_+	hypothetical protein	NA	NA	NA	NA
AYJ40205.1\|33388_33676_+\|transposase	transposase	NA	NA	NA	NA
AYJ40206.1\|33699_34578_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
AYJ40207.1\|34641_35439_+	hypothetical protein	NA	NA	NA	NA
AYJ40208.1\|35754_36597_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	5.1e-157	98.9
AYJ40209.1\|36650_36902_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	7.8e-37	95.2
AYJ40210.1\|37578_38754_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.8e-27	29.2
AYJ40211.1\|40754_40952_+	hypothetical protein	NA	NA	NA	NA
AYJ40212.1\|41002_41824_+	filamentation induced by cAMP protein fic	NA	NA	NA	NA
AYJ40213.1\|41859_41943_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AYJ40214.1\|42272_43043_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
AYJ40215.1\|43054_43783_+	tyrosine-protein kinase family protein	NA	NA	NA	NA
AYJ40216.1\|43769_44543_+	tyrosine protein phosphatase	NA	NA	NA	NA
AYJ40217.1\|44560_45505_+	SDR family NAD(P)-dependent oxidoreductase	A0A2K9L4U8	Tupanvirus	5.8e-40	34.7
AYJ40218.1\|45488_46160_+	sugar transferase	NA	NA	NA	NA
AYJ40219.1\|46156_47008_+	glycosyltransferase	NA	NA	NA	NA
AYJ40220.1\|47046_47439_+	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.8e-19	43.0
AYJ40221.1\|48037_48811_+	tyrosine protein phosphatase	NA	NA	NA	NA
AYJ40222.1\|48828_49776_+	SDR family NAD(P)-dependent oxidoreductase	A0A2K9L4U8	Tupanvirus	5.8e-40	34.7
AYJ40223.1\|49756_50434_+	sugar transferase	NA	NA	NA	NA
AYJ40224.1\|50430_51321_+	glycosyltransferase	NA	NA	NA	NA
AYJ40225.1\|51324_52509_+	hypothetical protein	NA	NA	NA	NA
AYJ40226.1\|52505_53504_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AYJ40227.1\|53500_54682_+	teichoic acid biosynthesis protein F	NA	NA	NA	NA
AYJ40228.1\|54704_55589_+	glycosyl transferase	NA	NA	NA	NA
AYJ40229.1\|55630_57076_+	teichoic acid transporter	NA	NA	NA	NA
AYJ40230.1\|57108_58038_-\|transposase	IS30-like element ISLpl1 family transposase	H7BW47	unidentified_phage	3.0e-25	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032744

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CRISPR-Cas detection and classification

Crispr_ID: CP032744_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032744_1

1314697-1314783

Orphan

Consensus_repeat	Method
ATCACCCCCGCATACACGGGAAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032744_1

>merge|CP032744|1|1314697-1314783|CRISPRCasFinder
ATCACCCCCGCATACACGGGAAACAGGGAAATTGATGTGCGCTAAGGGCTGGTATGACGGGATCACCCCCGCATACACGGGGAACAG

>CP032744|1|1|1314697-1314783|CRISPRCasFinder
ATCACCCCCGCATACACGGGAAACAG	GGAAATTGATGTGCGCTAAGGGCTGGTATGACGGG
ATCACCCCCGCATACACGGGGAACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP032744.1\|AYJ38447.1\|1317973_1318186_-\|hypothetical-protein	unknown	unknown	unknown
CP032744.1\|AYJ38442.1\|1312680_1312992_+\|hypothetical-protein	unknown	unknown	unknown
CP032744.1\|AYJ38449.1\|1320949_1321480_+\|YqeG-family-HAD-IIIA-type-phosphatase	unknown	unknown	gnl\|CDD\|225090
CP032744.1\|AYJ38444.1\|1314965_1316033_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176214
CP032744.1\|AYJ38443.1\|1313162_1314425_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
CP032744.1\|AYJ38434.1\|1305261_1305855_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
CP032744.1\|AYJ38451.1\|1322692_1323007_+\|ribosome-assembly-RNA-binding-protein-YhbY	unknown	unknown	gnl\|CDD\|198171
CP032744.1\|AYJ38435.1\|1305896_1306412_+\|transcriptional-regulator-NrdR	unknown	unknown	gnl\|CDD\|234774
CP032744.1\|AYJ38452.1\|1323019_1323655_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
CP032744.1\|AYJ38437.1\|1307840_1308776_+\|primosomal-protein-DnaI	unknown	unknown	gnl\|CDD\|236353
CP032744.1\|AYJ40103.1\|1319887_1320352_-\|hypothetical-protein	unknown	unknown	unknown
CP032744.1\|AYJ38438.1\|1309107_1311072_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
CP032744.1\|AYJ38445.1\|1316194_1316542_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP032744.1\|AYJ38439.1\|1311294_1311816_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
CP032744.1\|AYJ38440.1\|1311837_1312032_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
CP032744.1\|AYJ38436.1\|1306433_1307837_+\|helicase-DnaB	unknown	unknown	gnl\|CDD\|226138
CP032744.1\|AYJ38448.1\|1318570_1319884_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|236882
CP032744.1\|AYJ38441.1\|1312068_1312425_+\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
CP032744.1\|AYJ38450.1\|1321476_1322613_+\|ribosome-biogenesis-GTPase-YqeH	unknown	unknown	gnl\|CDD\|237511
CP032744.1\|AYJ38446.1\|1316937_1317687_+\|aspartate/glutamate-racemase-family-protein	unknown	unknown	gnl\|CDD\|213495

Protein	Function_ID	Function_description	E-value
CP032744.1\|AYJ38448.1\|1318570_1319884_-\|glycosyltransferase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	3.63544e-107
CP032744.1\|AYJ38449.1\|1320949_1321480_+\|YqeG-family-HAD-IIIA-type-phosphatase	gnl\|CDD\|225090	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only].	8.71681e-67
CP032744.1\|AYJ38444.1\|1314965_1316033_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176214	cd08252, AL_MDR, Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
CP032744.1\|AYJ38443.1\|1313162_1314425_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	1.13158e-179
CP032744.1\|AYJ38434.1\|1305261_1305855_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	5.15386e-83
CP032744.1\|AYJ38451.1\|1322692_1323007_+\|ribosome-assembly-RNA-binding-protein-YhbY	gnl\|CDD\|198171	smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been retained in plants. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome.	8.74273e-30
CP032744.1\|AYJ38435.1\|1305896_1306412_+\|transcriptional-regulator-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	4.13817e-88
CP032744.1\|AYJ38452.1\|1323019_1323655_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	2.61183e-89
CP032744.1\|AYJ38437.1\|1307840_1308776_+\|primosomal-protein-DnaI	gnl\|CDD\|236353	PRK08939, PRK08939, primosomal protein DnaI; Reviewed.	2.33305e-168
CP032744.1\|AYJ38438.1\|1309107_1311072_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
CP032744.1\|AYJ38445.1\|1316194_1316542_+\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	5.62301e-40
CP032744.1\|AYJ38439.1\|1311294_1311816_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	8.07718e-91
CP032744.1\|AYJ38440.1\|1311837_1312032_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.32915e-16
CP032744.1\|AYJ38436.1\|1306433_1307837_+\|helicase-DnaB	gnl\|CDD\|226138	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].	6.79263e-45
CP032744.1\|AYJ38441.1\|1312068_1312425_+\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	5.89656e-62
CP032744.1\|AYJ38450.1\|1321476_1322613_+\|ribosome-biogenesis-GTPase-YqeH	gnl\|CDD\|237511	PRK13796, PRK13796, GTPase YqeH; Provisional.	0
CP032744.1\|AYJ38446.1\|1316937_1317687_+\|aspartate/glutamate-racemase-family-protein	gnl\|CDD\|213495	TIGR00035, Aspartate_racemase, aspartate racemase. Asparate racemases and some close homologs of unknown function are related to the more common glutamate racemases, but form a distinct evolutionary branch. This model identifies members of the aspartate racemase-related subset of amino acid racemases. [Energy metabolism, Amino acids and amines].	3.14122e-61

>CP032744.1|AYJ38443.1|1313162_1314425_-|replication-associated-recombination-protein-A
MAFKTPLADQMRPQSLDQMVGQQDLLKSGQPLRQIIDQHVNIPLILWGPPGTGKTSLAQIIASQDDYPFVAFNASTENKAQLTKAIAQYPNQSFVLLIDEIHRMTKTLQDFLLPYLENGHVMLIGSTTENPIMSIVPAIRSRCQIFEFQPLSDTDIEIALRRAVTDIYELTDDQVDTQALNLIAISADGDLRIALNILETLHATDQHQITVAAVQNFAKQQHFSYDRKATKHYDYLSAYSDSMAGSDTDAALYYLTILLKNDDLPSVVRRLREIPYTYIGLANPEQVTQIVVAANQAEKIGMPKAKYPLMFATMLMCISPKSGSFDQSWEKLDQDTQNPSQHPMPRGLRDMHYKHSEEITGGGLINNPFQMPHQIAQQNYMPKGLAGRRYYFPKDNENERKLGAQYLKLHRFIYDEDYHE
>CP032744.1|AYJ38442.1|1312680_1312992_+|hypothetical-protein
MATVLPKAVKVWMGANILQIEFDNGEFRYLRTHFIDDYISAWSPKKGKGKRRNLWLMPSWEWLGANARIEPDGTVVLFEKDVYTAQELWHNSVMRIDLVSGVH
>CP032744.1|AYJ38441.1|1312068_1312425_+|50S-ribosomal-protein-L20
MARVKGGTVTRKRRKRILKLAKGYRGAKHIQFKVAKDQVMKSYEYAFRDRRRRKSDFRRLWIARINAAARINDISYSQLMHGLKLANVDVNRKMLADLAVNDADAFKALVDTAKKALA
>CP032744.1|AYJ38440.1|1311837_1312032_+|50S-ribosomal-protein-L35
MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHKLLQK
>CP032744.1|AYJ38439.1|1311294_1311816_+|translation-initiation-factor-IF-3
MTIAKDSMVNDGIRAREVRLIASDGEQLGVKSRQEAMQIAEDASLDLVLVAPKAKPPVARIMDYGKYRFEQQKKDREARKKQKVVSIKEVRLSPAIDTNDFNTKLKHAEKFLSKGDKVRVSIRFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYPKMDGRSMFLVLAPKTDK
>CP032744.1|AYJ38438.1|1309107_1311072_+|threonine--tRNA-ligase
MASINVKFPDGAEKQFDAGVTTEAIAKSISPSLAKRSVAGKFNDQIVDYRQPLTTDGSIEIIAADSEDGLNVLRQTAAQVLANAVKQLFPNIHFGSGEGNANGFFFDTDNPDEDGKQVSEDDLEAISDKMAAIIKQDLPIEREVLSKADALALVGDNPYQQDLVNERAAANNDQVVVYKQGDFVDLSDGAQLASTGKVKVFKLLSVAGAYWQGKSSNPMLQRIYGTAFLKQKDLDADLKRRQEARERDHRVIGNELDLFFVDPKVGNGLPYWMPNGATIRRQIERYIIDKEVANGYQHVYTPVLANLDVYKQSGHWEHYREDMFPPMDMGDGEQLELRPMNCPSHIQIYNHHIRSYRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHTFVAMDQIEEEFKKILSLMVEVYEDFDISDYRFRLSYRDPENKEKYFDDDAMWERSQKMLKSAMDDMGLDYFEAEGEAAFYGPKLDVQTKTALGGEETLSTIQLDFLLPERFDLKYVGADGEEHRPVMIHRGLVSTMERFVAYLTEIYKGAFPTWLAPKQVTIIPVNNGAHGAYAETVRRRLAAEGVRVSIDDRNEKMGYKIRESQTKKVPYLLVVGDQEVANGSVSVRKYGEERTESEAVDMFIGAITQEIKHYSRGASK
>CP032744.1|AYJ38437.1|1307840_1308776_+|primosomal-protein-DnaI
MENISETLRTLMNRKNLNHRYEALMTAVYQDPDVRQFLAAHQNELSSDALERSAAKLYEFCEEKRKIARHEPTQAPGYQPALVMSNHLIDIAYQPTPQLQKQQAAHELQQRVRSISMPKNIQTADLKTYDQDGDRATALMAALDFIDAYTQAPKRFHRGLYLYGSFGVGKTYLLGGMANALAAKGFNTTLIHFPSFAVEMKRSISNNTSADKVDAIKRAPILMIDDIGADSSSTWIRDDVLGVILEYRMQEELPTCFSSNFSMQELQDGYLTLSQKGDEEPVKAQRIMQRVRYLASEIEMVGRNRRLNPDA
>CP032744.1|AYJ38436.1|1306433_1307837_+|helicase-DnaB
MPNDKPLTPKTGLVVPQAPALSAAQQAVLAELYLPLMGPLAYSLYAALRSLQSSENELSNRRSHAELLGILNVDLPAVLAARRKLEATGLLRSYYQQDELGVVYIYQLQAPLLALQFFADDLLSVLLLDTVGELRYQQLASDFSAQPIDLTAAKDVTANILDVFHVDSQKVTTPPLSVQKVRAQLAANEPAEDHSPVLSDDDFDWQLLGQILKQNYVDLKQVASSRQLIITESRVYGISEIEMAKLISEVASLTTGQFDENQLKLLIARRYERPAVPSQQVATEVSVATSAIKDTKTSAQLSTAEQQLVTYAKQVAPYEFLTALKQEKHGFVTSGENRLVHDLIGRGVLPNAVINMVIYYLLQNRELAALNRNLLETVANDWQQHGITTPEAALIYLRQRKQPKSTPTRRKNNRPTRKEIMPRWAQQQQQTERGKQPAQTGKQITAAQRKQLADRLAKLETNSEKED
>CP032744.1|AYJ38435.1|1305896_1306412_+|transcriptional-regulator-NrdR
MQCPHCHHNGSRVVDSRPTDDGRVIRRRRECENCGFRFTTFERVEATPLLVIKKNGAREEFNREKVLRGIIRSAEKRPVSMETMTGVVDDVENKVRSLGENEISSQVIGEYVMEQLADIDEISYIRFASVYRQFKDMHVFLNELQDMMERDKVKLAKPSAKTTHAPKRKKD
>CP032744.1|AYJ38434.1|1305261_1305855_+|dephospho-CoA-kinase
MTKLIGLTGGIATGKSTVSKLLAAKLPIVDADKIAWQVEGPGQPTTQKIAAYFGQQAVLADGQLNRPWLGQLVFNDPQALQALTAITRLPIQYAMFEAIVAANQHQPAAIILDIPLLFESGWQHICDQVLVVTAPPTVVLQRLMARNHLSQQAAQARIDSQMPLAQKVAQADVVIDNGANIDKTEAAVLKWLKTITN
>CP032744.1|AYJ38444.1|1314965_1316033_-|zinc-binding-alcohol-dehydrogenase-family-protein
MHAIGFTDHLPIENPASLQDVTITKPTPHGHDILVQIQAVAVNPVDVGVRKAGHEHLTRPKILGWDATGIVTAVGKAVTLFQPGDWVFYAGSFNRPGCDSAYHLVDERLVGHAPKTLTPAACAAMPLTSLTAYEALFEQLHISFDPAKPNSQKHNQTILIINGAGGVGSIATQLAKLTGLTVISSASRPESITWTQQHGADLVVNHRHDLVREVHALGIKDVDYILGLSDLNSHWDEMCALIKPGGHIASITENRRPIDLKKLTKKRRTFAWEWMYSKSYYHTADMISQHYILDTIANLLDHDLLKSTLSQTLQPINALNLRQAHQLIEQRHMIGKVVIEGWNDLTPYCGSGNLL
>CP032744.1|AYJ38445.1|1316194_1316542_+|transcriptional-regulator
MQRQIYDCAAGCPVESTLQVIAGKWKSVILYHLLTTGTCRFSTLQKRLPGCSRRMLARQLQEMLQDGVIAKRVYPVVPPKTEYWVTPFGQTLKPVIMAMEAWGRQYNSVNGNIIS
>CP032744.1|AYJ38446.1|1316937_1317687_+|aspartate/glutamate-racemase-family-protein
MENCFGIIGGMGTMATEDFVHTVNRLTVTHRDQDYLNYVVLNDAQIPDRTAYILDHNCTNPLPSLKADVRLLNRLGAKFIVMTCNTAHYFIPALTAITNVPILNMPALAVEAACQLQQPRPLRIGILATTGTLKSQLYQQLIRSNGHMPVVPTEQQQAQVMALIYEDIKQHDYVDRVKFHGLIDQLLNAADCDAVILGCTELSVAQDAVPYGSERVIDAQYELARVTVQCAQAAKPTMILQRQQSMNGY
>CP032744.1|AYJ38447.1|1317973_1318186_-|hypothetical-protein
MDANLAGPVEPFATYIEDVTSYKIYIEKGEKMFELLEAIINIIKYLGMAIVFGFLAYALIYIMIGVFTMN
>CP032744.1|AYJ38448.1|1318570_1319884_-|glycosyltransferase
MEIMQTLKPFESIWNFVLLLLVSYPILGAFAWFVGVLCYQLIYRHRHTDDVEFKELAPAEQPLITIMIPAHNEEVMIEHTIDYLMTSLNYTNYEVLVTDDGSTDKTPEILARLQDKYAKLRVVTIRKNQGKAHAFNVGVGFARGEFILSNDADSIPEPDALWKYMSYFMGEEHANTAAVTANMDVQNRSTIIAKSQTVEFSSIVGVIKRSQVSALGNMYAYSGANTMYRRDALIDVGLFRQDRATEDISIAWDHQLNGWTTVFSPDILFYMNVPETLKALYHQRKRWAKGGTEVLLTNFRRVMSHPGKYLKQWAFITDQTLSIIWSLFFFVSTLIFLFSLISFFFTGNYERVYHMFCMAFIFVTFEMFAGLLQLLSALIVDDRGKKFKYLIFMPLYMLVYWQVNALALVMTLIPAVKTILGYGSGTWVSPVRKHHME
>CP032744.1|AYJ40103.1|1319887_1320352_-|hypothetical-protein
MQQYVTDKYFTKGHWWTKIWQTLVAIIGWICVAIPVYWTISSTLLANNPRFIHAWKYEEGKTLFYFFDRFFIFAFILIAIIVIISTIHNNHRVKQHISKERQYDEEQLAIRKRRLNNFYTTRFGQETFRQHVKHYTVDPEQNLDVHEIHKLYED
>CP032744.1|AYJ38449.1|1320949_1321480_+|YqeG-family-HAD-IIIA-type-phosphatase
MIKQFKPTWMIPAIYNVTPAQLRAQGIKAVFTDLDNTLIAWNNPDGTPELKKWLHALQDAGIPLVVVSNNSEDRIAKALTSLELPFVSRSLKPLPIGITKARRDLGLQPNEVVMVGDQYITDMWAAHLAGVSSILVKPIVTTDAWNTRINRFFERFIKLRLAHVYPEMHFQEDLNK
>CP032744.1|AYJ38450.1|1321476_1322613_+|ribosome-biogenesis-GTPase-YqeH
MSETSEETLYCIGCGAAIQTTDPKAAGYTPNSALQKSLASDVQDLYCQRCFRLRHYNEIVPVGLTDDDFRHLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHSIDELLAMIEKYRRGRDVYVVGVTNVGKSTLINRIIANNTGLKDLITTSRFPGTTLDKIEIPLDDGHMMVDTPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLDIVDTMKPTGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDAVADFPALVRHEFKVTEISDIVFEGLGWVTVAADTRVAAWAPQGVAVLTRPAMINKR
>CP032744.1|AYJ38451.1|1322692_1323007_+|ribosome-assembly-RNA-binding-protein-YhbY
MENLRGKQKHYLRGEAHHMRPLFAVGKNGLTDDWLMQLTGALDKRELIKVNILQNADVTTAEVKAAIEQHTAITVVQTIGRVLVLYLPASHEEDRHYSLEVAKL
>CP032744.1|AYJ38452.1|1323019_1323655_+|nicotinate-nucleotide-adenylyltransferase
MQTVNQTATKVLTETVTAIPHRRVGILGGTFNPPHLGHLIMAQQVGDQLGLDEVRFMPDAQPPHVDEKKTIAIEDRANMVQEAIVDNPLFRLETAEITRGGKSYTYETMKLLKAQHPDTQYYFIIGGDMVDYLHTWYHIDDLVKLVTFVGIKRTGYPTTSQYPVIWVDAPLIDISSTQIRQKISHGHSVRYLVPETVAAYIKEHHLYEQND

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032744_1	1.1\|1314723\|35\|CP032744\|CRISPRCasFinder	1314723-1314757	35	NC_004305	Lactobacillus phage phig1e, complete genome	34777-34811	5	0.857
CP032744_1	1.1\|1314723\|35\|CP032744\|CRISPRCasFinder	1314723-1314757	35	X98106	Lactobacillus bacteriophage phig1e complete genomic DNA	34777-34811	5	0.857

1. spacer 1.1|1314723|35|CP032744|CRISPRCasFinder matches to NC_004305 (Lactobacillus phage phig1e, complete genome) position: , mismatch: 5, identity: 0.857

ggaaattgatgtgcgctaagggctggtatgacggg	CRISPR spacer
ggaaattgatgtgtgccaagggctggtatgatgtc	Protospacer
*************.**.**************.*

2. spacer 1.1|1314723|35|CP032744|CRISPRCasFinder matches to X98106 (Lactobacillus bacteriophage phig1e complete genomic DNA) position: , mismatch: 5, identity: 0.857

ggaaattgatgtgcgctaagggctggtatgacggg	CRISPR spacer
ggaaattgatgtgtgccaagggctggtatgatgtc	Protospacer
*************.**.**************.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

361681 : 435408

Tupanvirus(20.0%)

bacteriocin,protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ37625.1\|361681_362350_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
AYJ37626.1\|362778_363009_+	hypothetical protein	NA	NA	NA	NA
AYJ37627.1\|363731_363926_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
AYJ37628.1\|363949_364105_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
AYJ37629.1\|364425_364614_+	pirin	NA	NA	NA	NA
AYJ37630.1\|364950_365097_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
AYJ37631.1\|365287_366616_+	GHKL domain-containing protein	NA	NA	NA	NA
AYJ37632.1\|366616_367360_+	DNA-binding response regulator	NA	NA	NA	NA
AYJ37633.1\|367479_368223_+	DNA-binding response regulator	NA	NA	NA	NA
AYJ37634.1\|368526_369300_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ37635.1\|369393_369552_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	NA	NA	NA	NA
AYJ37636.1\|369576_369747_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	NA	NA	NA	NA
AYJ37637.1\|370012_372163_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.7e-45	27.9
AYJ37638.1\|372179_373556_+	HlyD family secretion protein	NA	NA	NA	NA
AYJ37639.1\|373646_374336_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ37640.1\|374403_375072_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ37641.1\|375159_375840_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ37642.1\|375935_376622_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYJ37643.1\|376777_376981_+	hypothetical protein	NA	NA	NA	NA
AYJ37644.1\|377073_379383_-	ATP-dependent DNA helicase	NA	NA	NA	NA
AYJ37645.1\|379641_380418_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
AYJ37646.1\|380855_381872_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AYJ37647.1\|382262_382973_+	GntR family transcriptional regulator	NA	NA	NA	NA
AYJ37648.1\|383045_384407_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AYJ37649.1\|384413_384602_+	hypothetical protein	NA	NA	NA	NA
AYJ37650.1\|384591_385014_+	DUF3284 domain-containing protein	NA	NA	NA	NA
AYJ37651.1\|386605_388042_+	glycosyl hydrolase family protein	A0A0B5JD41	Pandoravirus	6.3e-30	25.5
AYJ37652.1\|388162_389059_+	ROK family protein	NA	NA	NA	NA
AYJ37653.1\|389210_389957_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYJ37654.1\|390069_391083_+\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
AYJ37655.1\|391499_392417_+	Ppx/GppA family phosphatase	NA	NA	NA	NA
AYJ37656.1\|392444_393719_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
AYJ37657.1\|393711_394671_+	IpaB/EvcA family protein	NA	NA	NA	NA
AYJ37658.1\|394692_395397_+	NAD-dependent protein deacylase	NA	NA	NA	NA
AYJ37659.1\|395396_396239_+	DUF72 domain-containing protein	NA	NA	NA	NA
AYJ37660.1\|396566_398618_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.8e-91	36.3
AYJ37661.1\|398853_400035_+	Bcr/CflA family efflux MFS transporter	NA	NA	NA	NA
AYJ37662.1\|400103_400517_-	MerR family transcriptional regulator	NA	NA	NA	NA
AYJ37663.1\|400605_401346_+	SDR family oxidoreductase	NA	NA	NA	NA
AYJ37664.1\|401488_402265_+	TatD family deoxyribonuclease	NA	NA	NA	NA
AYJ37665.1\|402251_402815_+	ribonuclease M5	NA	NA	NA	NA
AYJ37666.1\|402811_403702_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
AYJ37667.1\|403806_404058_+	hypothetical protein	NA	NA	NA	NA
AYJ37668.1\|404188_405055_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
AYJ37669.1\|405354_406299_+	alpha/beta hydrolase	NA	NA	NA	NA
AYJ37670.1\|406591_407290_+	ABC transporter ATP-binding protein	A0A1V0SGN0	Hokovirus	2.8e-15	26.5
AYJ37671.1\|407276_408080_+	metal ABC transporter permease	NA	NA	NA	NA
AYJ37672.1\|408556_409393_+	pur operon repressor	NA	NA	NA	NA
AYJ37673.1\|409461_410844_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L140	Tupanvirus	3.7e-27	32.4
AYJ37674.1\|411013_411838_+	serine hydrolase	NA	NA	NA	NA
AYJ37675.1\|412227_413208_+	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	4.9e-42	36.3
AYJ37676.1\|413497_414520_+	YdcF family protein	NA	NA	NA	NA
AYJ37677.1\|414602_415589_+	hypothetical protein	NA	NA	NA	NA
AYJ37678.1\|415971_416781_-	sugar-phosphatase	NA	NA	NA	NA
AYJ37679.1\|416801_418154_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	5.2e-26	32.9
AYJ37680.1\|418168_418978_-	lipoate--protein ligase family protein	NA	NA	NA	NA
AYJ37681.1\|419451_419892_+	DUF1934 domain-containing protein	NA	NA	NA	NA
AYJ37682.1\|419936_420545_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
AYJ37683.1\|420718_422332_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.9e-145	49.4
AYJ37684.1\|422811_424083_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.9e-95	43.7
AYJ37685.1\|424434_425715_+	HAAAP family serine/threonine permease	NA	NA	NA	NA
AYJ37686.1\|426066_426720_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA
AYJ37687.1\|426739_427639_+	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
AYJ37688.1\|427789_428518_+	hypothetical protein	NA	NA	NA	NA
AYJ37689.1\|429349_429544_+	hypothetical protein	NA	NA	NA	NA
AYJ37690.1\|430316_430511_-	hypothetical protein	NA	NA	NA	NA
AYJ37691.1\|431001_432282_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AYJ37692.1\|432311_433604_+	transcription termination factor Rho	NA	NA	NA	NA
AYJ37693.1\|433730_433976_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
AYJ37694.1\|434109_435408_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.8e-42	30.8

DBSCAN-SWA_2

566868 : 575579

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ37802.1\|566868_568566_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.0e-55	37.0
AYJ37803.1\|568587_568896_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AYJ37804.1\|568911_569511_+	recombination protein RecR	NA	NA	NA	NA
AYJ37805.1\|569525_569777_+	DUF2508 family protein	NA	NA	NA	NA
AYJ37806.1\|570265_570931_+	dTMP kinase	M1PSC7	Streptococcus_phage	2.5e-53	52.2
AYJ37807.1\|570927_571257_+	hypothetical protein	NA	NA	NA	NA
AYJ37808.1\|571273_572293_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.8e-32	33.2
AYJ37809.1\|572317_572665_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.4e-12	33.3
AYJ37810.1\|572764_573661_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.9e-81	55.3
AYJ37811.1\|573664_574450_+	acyl-ACP thioesterase	NA	NA	NA	NA
AYJ37812.1\|574583_575579_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	7.7e-51	37.9

DBSCAN-SWA_3

949467 : 1029350

Lactobacillus_phage(80.36%)

tRNA,holin,head,tail,terminase,capsid,transposase,portal,integrase,protease

attL 971609:971624|attR 1013403:1013418

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ38137.1\|949467_949788_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	NA	NA	NA	NA
AYJ38138.1\|949787_951251_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
AYJ38139.1\|951250_952675_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B	NA	NA	NA	NA
AYJ38140.1\|952783_953800_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.5e-17	26.8
AYJ38141.1\|954140_955514_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	5.0e-125	50.0
AYJ38142.1\|956139_956679_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYJ38143.1\|956667_957498_-	N-acyl homoserine lactonase family protein	NA	NA	NA	NA
AYJ38144.1\|958079_958655_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYJ38145.1\|958983_961323_+	HAD family hydrolase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.3e-40	25.3
AYJ38146.1\|961718_962078_+	PadR family transcriptional regulator	NA	NA	NA	NA
AYJ38147.1\|962061_963375_+	hypothetical protein	NA	NA	NA	NA
AYJ38148.1\|963708_965025_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AYJ38149.1\|965017_965902_+	alpha/beta hydrolase	NA	NA	NA	NA
AYJ38150.1\|966026_966905_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYJ38151.1\|966929_967706_+	lysozyme	A0A141HSE6	Bacillus_phage	9.0e-07	31.0
AYJ38152.1\|967934_968303_-	DUF4828 domain-containing protein	NA	NA	NA	NA
AYJ38153.1\|968648_968849_+	cold-shock protein	Q9AZD3	Lactococcus_phage	3.1e-20	71.4
AYJ38154.1\|969037_970045_+	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AYJ38155.1\|970057_971392_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-38	31.2
971609:971624	attL	NA	NA	NA	NA
AYJ38156.1\|971633_972815_-\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	3.1e-59	37.9
AYJ38157.1\|973031_973754_-	hypothetical protein	U5U717	Lactobacillus_phage	9.5e-35	41.9
AYJ38158.1\|973792_974023_+	2-hydroxymuconic semialdehyde hydrolase	U5U783	Lactobacillus_phage	5.4e-08	47.5
AYJ38159.1\|974094_974409_-	hypothetical protein	NA	NA	NA	NA
AYJ38160.1\|974726_975599_-	hypothetical protein	NA	NA	NA	NA
AYJ38161.1\|975659_976067_-	ImmA/IrrE family metallo-endopeptidase	A0A1B0Y2S4	Lactobacillus_phage	6.8e-30	47.8
AYJ38162.1\|976059_976392_-	XRE family transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	6.7e-28	58.1
AYJ38163.1\|976652_976874_+	hypothetical protein	NA	NA	NA	NA
AYJ40095.1\|976879_977623_+	hypothetical protein	A0A1P8BM06	Lactococcus_phage	8.8e-52	45.7
AYJ38164.1\|977634_977844_+	hypothetical protein	NA	NA	NA	NA
AYJ38165.1\|977959_978286_-	RNA polymerase III	E9LUT2	Lactobacillus_phage	3.5e-53	98.1
AYJ38166.1\|978353_978632_+	hypothetical protein	A0A2P0ZLA9	Lactobacillus_phage	1.7e-32	78.2
AYJ38167.1\|978766_979006_+	tagatose-bisphosphate aldolase	E9LUT6	Lactobacillus_phage	2.1e-31	80.0
AYJ38168.1\|979017_979218_+	hypothetical protein	E9LUT7	Lactobacillus_phage	1.0e-26	89.4
AYJ38169.1\|979542_980403_+	DUF1351 domain-containing protein	A0A0P0IV40	Lactobacillus_phage	3.2e-37	34.4
AYJ38170.1\|980403_981066_+	nucleotide-binding protein	E9LUU1	Lactobacillus_phage	1.4e-120	99.5
AYJ38171.1\|981067_981727_+	DUF669 domain-containing protein	E9LUU2	Lactobacillus_phage	1.3e-91	92.2
AYJ38172.1\|981773_982466_+	hypothetical protein	E9LUU3	Lactobacillus_phage	1.2e-130	97.8
AYJ38173.1\|982515_983259_+	replisome organizer	E9LUM6	Lactobacillus_phage	4.1e-41	57.5
AYJ38174.1\|983258_984044_+	ATP-binding protein	E9LUN6	Lactobacillus_phage	1.6e-131	90.4
AYJ38175.1\|984179_984488_+	hypothetical protein	E9LUN7	Lactobacillus_phage	1.9e-45	90.2
AYJ38176.1\|984480_984639_+	hypothetical protein	A0A2P0ZLB5	Lactobacillus_phage	1.5e-17	90.4
AYJ38177.1\|984814_985144_+	hypothetical protein	NA	NA	NA	NA
AYJ38178.1\|985147_985591_+	hypothetical protein	A0A2P0ZLC1	Lactobacillus_phage	1.5e-11	43.8
AYJ38179.1\|985587_985800_+	hypothetical protein	A0A1I9KKE0	Lactobacillus_phage	1.5e-28	74.3
AYJ38180.1\|985796_986195_+	hypothetical protein	A0A2K9VC51	Lactobacillus_phage	4.1e-32	51.0
AYJ38181.1\|986191_986362_+	hypothetical protein	E9LUP4	Lactobacillus_phage	2.0e-20	94.6
AYJ38182.1\|986342_986768_+	transcriptional regulator	E9LUP5	Lactobacillus_phage	7.2e-67	87.2
AYJ38183.1\|987234_987786_+	hypothetical protein	A8ASQ2	Listeria_phage	1.6e-21	38.3
AYJ38184.1\|988011_988323_+	hypothetical protein	NA	NA	NA	NA
AYJ38185.1\|988464_988977_+	HNH endonuclease	E9LUP7	Lactobacillus_phage	2.4e-80	91.7
AYJ38186.1\|989184_989643_+\|terminase	phage terminase small subunit P27 family	E9LUP8	Lactobacillus_phage	6.1e-80	96.7
AYJ38187.1\|989645_991544_+\|terminase	terminase large subunit	E9LUP9	Lactobacillus_phage	0.0e+00	96.0
AYJ38188.1\|991533_991728_+	DUF1056 family protein	E9LUQ0	Lactobacillus_phage	6.3e-26	92.2
AYJ38189.1\|991730_992921_+\|portal	phage portal protein	E9LUQ1	Lactobacillus_phage	8.4e-214	95.9
AYJ38190.1\|992901_993612_+\|protease	Clp protease ClpP	Q9T1F7	Lactobacillus_phage	6.9e-54	48.5
AYJ38191.1\|993626_994865_+\|capsid	phage major capsid protein	E9LUQ3	Lactobacillus_phage	2.0e-72	41.9
AYJ38192.1\|994937_995276_+\|head,tail	phage gp6-like head-tail connector protein	E9LUQ4	Lactobacillus_phage	3.6e-53	94.6
AYJ38193.1\|995259_995622_+\|head,tail	head-tail adaptor protein	E9LUQ5	Lactobacillus_phage	1.2e-62	95.8
AYJ38194.1\|995611_996052_+\|tail	phage tail protein	E9LUQ6	Lactobacillus_phage	2.1e-77	97.3
AYJ38195.1\|996048_996432_+	hypothetical protein	E9LUQ7	Lactobacillus_phage	3.3e-63	95.3
AYJ38196.1\|996432_997071_+\|tail	phage tail protein	E9LUQ8	Lactobacillus_phage	3.7e-107	92.9
AYJ38197.1\|997272_997656_+	hypothetical protein	E9LUQ9	Lactobacillus_phage	8.8e-64	99.2
AYJ38198.1\|997652_997844_+	hypothetical protein	E9LUR0	Lactobacillus_phage	1.5e-27	100.0
AYJ38199.1\|997856_1003079_+\|tail	phage tail protein	E9LUR1	Lactobacillus_phage	0.0e+00	77.5
AYJ40096.1\|1003220_1004861_+\|tail	phage tail protein	E9LUR2	Lactobacillus_phage	1.0e-217	65.3
AYJ38200.1\|1004925_1007316_+	hypothetical protein	E9LUR3	Lactobacillus_phage	0.0e+00	69.4
AYJ38201.1\|1007332_1009810_+	hypothetical protein	A0A2K9VDF2	Lactobacillus_phage	3.4e-31	58.9
AYJ38202.1\|1009802_1010066_+	hypothetical protein	NA	NA	NA	NA
AYJ38203.1\|1010214_1011270_+	collagen-like protein	A0A2P0ZLF6	Lactobacillus_phage	1.2e-57	88.9
AYJ38204.1\|1011266_1011512_+	hypothetical protein	A0A0A1ENR9	Lactobacillus_phage	1.2e-18	69.6
AYJ40097.1\|1011556_1012690_+	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	6.9e-32	66.7
AYJ38205.1\|1012689_1012953_+\|holin	holin	E9LUR9	Lactobacillus_phage	4.5e-35	92.0
AYJ40098.1\|1012967_1013342_+\|holin	holin	A0A2K9VCG4	Lactobacillus_phage	7.9e-17	67.5
AYJ38206.1\|1013646_1014438_-	hypothetical protein	NA	NA	NA	NA
1013403:1013418	attR	NA	NA	NA	NA
AYJ38207.1\|1014656_1015283_-	DUF3862 domain-containing protein	NA	NA	NA	NA
AYJ38208.1\|1016078_1016519_-	universal stress protein	NA	NA	NA	NA
AYJ38209.1\|1016651_1017959_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AYJ38210.1\|1017951_1018818_+	alpha/beta hydrolase	NA	NA	NA	NA
AYJ38211.1\|1019131_1019332_-	hypothetical protein	NA	NA	NA	NA
AYJ38212.1\|1019532_1019973_+	hypothetical protein	NA	NA	NA	NA
AYJ38213.1\|1020408_1020972_+	hypothetical protein	NA	NA	NA	NA
AYJ38214.1\|1021090_1022437_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
AYJ38215.1\|1022709_1023891_+	class A beta-lactamase-related serine hydrolase	NA	NA	NA	NA
AYJ38216.1\|1024209_1025328_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	1.4e-21	32.2
AYJ38217.1\|1025724_1026654_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
AYJ38218.1\|1026863_1027580_+	aquaporin family protein	A0A1J0F964	Only_Syngen_Nebraska_virus	1.6e-18	32.3
AYJ38219.1\|1028429_1029350_+\|transposase	IS30-like element ISLsa1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-51	38.6

DBSCAN-SWA_4

1729616 : 1879988

175

Lactobacillus_phage(47.06%)

tRNA,plate,portal,capsid,terminase,tail,integrase,protease,lysis

attL 1814205:1814264|attR 1855271:1855366

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ38818.1\|1729616_1730540_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
AYJ38819.1\|1731351_1731873_-	shikimate kinase	NA	NA	NA	NA
AYJ38820.1\|1731875_1732973_-	prephenate dehydrogenase	NA	NA	NA	NA
AYJ38821.1\|1732969_1734274_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AYJ38822.1\|1734287_1734815_-	amino acid biosynthesis protein	NA	NA	NA	NA
AYJ38823.1\|1734824_1735994_-	chorismate synthase	NA	NA	NA	NA
AYJ38824.1\|1735986_1737429_-	MFS transporter	NA	NA	NA	NA
AYJ38825.1\|1738098_1738452_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
AYJ38826.1\|1738475_1741064_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.3e-20	23.6
AYJ38827.1\|1741078_1741384_-	hypothetical protein	NA	NA	NA	NA
AYJ38828.1\|1741373_1741673_-	YlxR family protein	NA	NA	NA	NA
AYJ38829.1\|1741717_1742938_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
AYJ38830.1\|1742958_1743435_-	ribosome maturation factor RimP	NA	NA	NA	NA
AYJ38831.1\|1743746_1748060_-	PolC-type DNA polymerase III	A0A1X9SH08	Bradyrhizobium_phage	1.0e-14	34.0
AYJ38832.1\|1748425_1750135_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AYJ38833.1\|1750174_1751452_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
AYJ38834.1\|1751489_1752275_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AYJ38835.1\|1752290_1753070_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	3.7e-24	43.8
AYJ38836.1\|1753189_1753753_-	ribosome recycling factor	NA	NA	NA	NA
AYJ38837.1\|1753754_1754477_-	UMP kinase	NA	NA	NA	NA
AYJ38838.1\|1754676_1755555_-	elongation factor Ts	NA	NA	NA	NA
AYJ38839.1\|1755657_1756461_-	30S ribosomal protein S2	NA	NA	NA	NA
AYJ38840.1\|1756684_1757407_+	HAD family hydrolase	NA	NA	NA	NA
AYJ38841.1\|1757646_1758645_-	D-2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.3e-47	34.9
AYJ38842.1\|1758729_1759035_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
AYJ38843.1\|1759021_1759777_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
AYJ38844.1\|1759889_1760528_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AYJ38845.1\|1760586_1760823_-	YneF family protein	NA	NA	NA	NA
AYJ38846.1\|1760920_1761160_-	DUF896 domain-containing protein	NA	NA	NA	NA
AYJ38847.1\|1761311_1761944_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	2.3e-16	56.2
AYJ38848.1\|1762043_1762697_-	hypothetical protein	NA	NA	NA	NA
AYJ38849.1\|1762796_1763426_+	hypothetical protein	NA	NA	NA	NA
AYJ38850.1\|1763472_1764642_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
AYJ40122.1\|1764677_1765070_-	hypothetical protein	NA	NA	NA	NA
AYJ38851.1\|1765234_1765627_+	hypothetical protein	NA	NA	NA	NA
AYJ38852.1\|1766103_1767045_+	glycosyltransferase	V9QJB1	Oenococcus_phage	3.1e-78	48.7
AYJ38853.1\|1767404_1768589_-	LytR family transcriptional regulator	NA	NA	NA	NA
AYJ38854.1\|1768569_1769361_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.0e-31	37.3
AYJ38855.1\|1769379_1771122_-	ABC transporter permease subunit	NA	NA	NA	NA
AYJ38856.1\|1771600_1772812_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
AYJ38857.1\|1773552_1774461_-	lysin	A0A2P0ZLG2	Lactobacillus_phage	4.5e-98	76.9
AYJ38858.1\|1774460_1774745_-\|lysis	lysis protein	A0A2P0ZLE8	Lactobacillus_phage	3.7e-19	54.3
AYJ38859.1\|1774744_1774951_-	hypothetical protein	A0A2P0ZLG4	Lactobacillus_phage	4.1e-07	55.9
AYJ38860.1\|1774955_1775339_-	hypothetical protein	A0A2P0ZLF7	Lactobacillus_phage	2.1e-41	63.5
AYJ38861.1\|1775352_1775763_-	hypothetical protein	NA	NA	NA	NA
AYJ38862.1\|1775852_1776020_-	XkdX family protein	NA	NA	NA	NA
AYJ38863.1\|1776019_1776370_-	hypothetical protein	NA	NA	NA	NA
AYJ38864.1\|1776362_1777322_-	hypothetical protein	A0A1B1IN44	Lactococcus_phage	6.5e-15	33.2
AYJ38865.1\|1777373_1778201_-	hypothetical protein	NA	NA	NA	NA
AYJ38866.1\|1778317_1779151_-	hypothetical protein	NA	NA	NA	NA
AYJ38867.1\|1779151_1779793_-	DUF2313 domain-containing protein	Q9AZ88	Lactobacillus_prophage	2.5e-26	42.1
AYJ38868.1\|1779785_1780934_-\|plate	baseplate J/gp47 family protein	L0P7C2	Lactobacillus_phage	8.1e-121	56.3
AYJ38869.1\|1780923_1781355_-	DUF2634 domain-containing protein	A9D9X1	Lactobacillus_prophage	9.1e-25	51.3
AYJ40123.1\|1781365_1781641_-	DUF2577 domain-containing protein	A9D9W8	Lactobacillus_prophage	1.5e-12	35.2
AYJ38870.1\|1781671_1782691_-	late control protein D	L0P6D8	Lactobacillus_phage	3.5e-59	41.2
AYJ38871.1\|1782694_1783387_-	hypothetical protein	L0P8M9	Lactobacillus_phage	1.1e-35	45.3
AYJ38872.1\|1783402_1787086_-\|tail	phage tail protein	X2CYG3	Lactobacillus_phage	2.7e-08	35.9
AYJ38873.1\|1787317_1787749_-	hypothetical protein	S6B9X5	Thermus_phage	4.5e-08	33.8
AYJ38874.1\|1787762_1788245_-\|tail	phage tail protein	Q20DC7	Lactobacillus_phage	3.0e-61	74.5
AYJ38875.1\|1788258_1789623_-\|tail	phage tail protein	Q20DC8	Lactobacillus_phage	3.4e-102	46.5
AYJ38876.1\|1789623_1789815_-	hypothetical protein	NA	NA	NA	NA
AYJ38877.1\|1789807_1790221_-	hypothetical protein	A9D9U4	Lactobacillus_prophage	6.9e-22	36.3
AYJ38878.1\|1790230_1790656_-	HK97 gp10 family phage protein	A0A0A7RVN8	Clostridium_phage	6.6e-12	28.7
AYJ38879.1\|1790609_1791005_-	hypothetical protein	A9D9T8	Lactobacillus_prophage	6.8e-35	63.3
AYJ38880.1\|1791001_1791391_-	hypothetical protein	X2CXX4	Lactobacillus_phage	5.9e-23	42.6
AYJ38881.1\|1791404_1792445_-\|capsid	capsid protein	Q20DD4	Lactobacillus_phage	2.4e-140	73.4
AYJ38882.1\|1792457_1793012_-	hypothetical protein	X2CYF9	Lactobacillus_phage	8.9e-49	56.8
AYJ38883.1\|1793159_1793411_-	hypothetical protein	NA	NA	NA	NA
AYJ38884.1\|1793397_1795068_-	hypothetical protein	A9D9S7	Lactobacillus_prophage	1.5e-78	43.5
AYJ38885.1\|1795054_1796485_-\|portal	phage portal protein	X2CY64	Lactobacillus_phage	6.1e-142	55.9
AYJ38886.1\|1796466_1797735_-\|terminase	PBSX family phage terminase large subunit	B6CXD2	Clostridium_phage	7.9e-101	46.1
AYJ38887.1\|1797703_1798540_-\|terminase	terminase small subunit	Q6SE85	Lactobacillus_prophage	1.7e-64	54.4
AYJ38888.1\|1798586_1799117_-	hypothetical protein	NA	NA	NA	NA
AYJ38889.1\|1799306_1799597_-	hypothetical protein	NA	NA	NA	NA
AYJ38890.1\|1799702_1800524_-	hypothetical protein	NA	NA	NA	NA
AYJ38891.1\|1800767_1801337_+	hypothetical protein	NA	NA	NA	NA
AYJ38892.1\|1801470_1801971_-	hypothetical protein	A0A097BY45	Enterococcus_phage	3.7e-22	35.5
AYJ38893.1\|1801992_1802316_-	DUF771 domain-containing protein	E9LUT3	Lactobacillus_phage	1.8e-25	50.0
AYJ38894.1\|1802670_1803096_-	hypothetical protein	K4I239	Lactobacillus_phage	2.2e-63	79.3
AYJ38895.1\|1803393_1803846_-	hypothetical protein	A8ASP3	Listeria_phage	1.9e-12	59.2
AYJ38896.1\|1804260_1804596_-	hypothetical protein	NA	NA	NA	NA
AYJ38897.1\|1804582_1805287_-	hypothetical protein	A0A2D1GP81	Lactobacillus_phage	8.4e-36	39.5
AYJ38898.1\|1805432_1806353_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	1.2e-42	37.5
AYJ38899.1\|1807200_1807644_-	single-stranded DNA-binding protein	A0A1U9WQM3	Geobacillus_phage	1.8e-15	36.1
AYJ38900.1\|1807640_1808399_-	hypothetical protein	D7RWM8	Brochothrix_phage	3.7e-13	37.5
AYJ38901.1\|1808553_1808733_-	hypothetical protein	NA	NA	NA	NA
AYJ38902.1\|1808748_1808949_-	hypothetical protein	NA	NA	NA	NA
AYJ38903.1\|1808935_1809193_-	hypothetical protein	NA	NA	NA	NA
AYJ38904.1\|1809363_1809624_-	hypothetical protein	NA	NA	NA	NA
AYJ40124.1\|1809644_1810373_-	hypothetical protein	A0A1P8BM06	Lactococcus_phage	2.9e-47	43.3
AYJ38905.1\|1810388_1810598_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYJ38906.1\|1810851_1811256_+	XRE family transcriptional regulator	Q9T1J3	Lactobacillus_phage	3.5e-10	36.6
AYJ38907.1\|1811265_1811742_+	hypothetical protein	NA	NA	NA	NA
AYJ38908.1\|1811786_1812197_+	hypothetical protein	NA	NA	NA	NA
AYJ38909.1\|1812302_1812875_+	hypothetical protein	NA	NA	NA	NA
AYJ38910.1\|1813040_1814204_+\|integrase	site-specific integrase	E9LUK6	Lactobacillus_phage	1.3e-65	38.4
1814205:1814264	attL	NA	NA	NA	NA
AYJ38911.1\|1814617_1815526_-	lysin	A0A2P0ZLG2	Lactobacillus_phage	4.5e-98	76.9
AYJ38912.1\|1815525_1815810_-\|lysis	lysis protein	A0A2P0ZLE8	Lactobacillus_phage	3.7e-19	54.3
AYJ38913.1\|1815809_1816016_-	hypothetical protein	A0A2P0ZLG4	Lactobacillus_phage	4.1e-07	55.9
AYJ38914.1\|1816020_1816404_-	hypothetical protein	A0A2P0ZLF7	Lactobacillus_phage	2.1e-41	63.5
AYJ38915.1\|1816417_1816828_-	hypothetical protein	NA	NA	NA	NA
AYJ38916.1\|1816917_1817085_-	XkdX family protein	NA	NA	NA	NA
AYJ38917.1\|1817084_1817435_-	hypothetical protein	NA	NA	NA	NA
AYJ38918.1\|1817427_1818387_-	hypothetical protein	A0A1B1IN44	Lactococcus_phage	6.5e-15	33.2
AYJ38919.1\|1818438_1819266_-	hypothetical protein	NA	NA	NA	NA
AYJ38920.1\|1819383_1820217_-	hypothetical protein	NA	NA	NA	NA
AYJ38921.1\|1820217_1820859_-	DUF2313 domain-containing protein	Q9AZ88	Lactobacillus_prophage	2.5e-26	42.1
AYJ38922.1\|1820851_1822000_-\|plate	baseplate J/gp47 family protein	L0P7C2	Lactobacillus_phage	8.1e-121	56.3
AYJ38923.1\|1821989_1822421_-	DUF2634 domain-containing protein	A9D9X1	Lactobacillus_prophage	9.1e-25	51.3
AYJ40125.1\|1822431_1822707_-	DUF2577 domain-containing protein	A9D9W8	Lactobacillus_prophage	1.5e-12	35.2
AYJ38924.1\|1822737_1823757_-	late control protein D	L0P6D8	Lactobacillus_phage	3.5e-59	41.2
AYJ38925.1\|1823760_1824453_-	hypothetical protein	L0P8M9	Lactobacillus_phage	1.1e-35	45.3
AYJ38926.1\|1824468_1828152_-\|tail	phage tail protein	X2CYG3	Lactobacillus_phage	2.7e-08	35.9
AYJ38927.1\|1828383_1828815_-	hypothetical protein	S6B9X5	Thermus_phage	4.5e-08	33.8
AYJ38928.1\|1828828_1829311_-\|tail	phage tail protein	Q20DC7	Lactobacillus_phage	3.0e-61	74.5
AYJ38929.1\|1829324_1830689_-\|tail	phage tail protein	Q20DC8	Lactobacillus_phage	3.4e-102	46.5
AYJ38930.1\|1830689_1830881_-	hypothetical protein	NA	NA	NA	NA
AYJ38931.1\|1830873_1831287_-	hypothetical protein	A9D9U4	Lactobacillus_prophage	6.9e-22	36.3
AYJ38932.1\|1831296_1831722_-	HK97 gp10 family phage protein	A0A0A7RVN8	Clostridium_phage	6.6e-12	28.7
AYJ38933.1\|1831675_1832071_-	hypothetical protein	A9D9T8	Lactobacillus_prophage	6.8e-35	63.3
AYJ38934.1\|1832067_1832457_-	hypothetical protein	X2CXX4	Lactobacillus_phage	5.9e-23	42.6
AYJ38935.1\|1832470_1833511_-\|capsid	capsid protein	Q20DD4	Lactobacillus_phage	2.4e-140	73.4
AYJ38936.1\|1833523_1834078_-	hypothetical protein	X2CYF9	Lactobacillus_phage	8.9e-49	56.8
AYJ38937.1\|1834225_1834477_-	hypothetical protein	NA	NA	NA	NA
AYJ38938.1\|1834463_1836134_-	hypothetical protein	A9D9S7	Lactobacillus_prophage	1.5e-78	43.5
AYJ38939.1\|1836120_1837551_-\|portal	phage portal protein	X2CY64	Lactobacillus_phage	6.1e-142	55.9
AYJ38940.1\|1837532_1838801_-\|terminase	PBSX family phage terminase large subunit	B6CXD2	Clostridium_phage	7.9e-101	46.1
AYJ38941.1\|1838769_1839606_-\|terminase	terminase small subunit	Q6SE85	Lactobacillus_prophage	1.7e-64	54.4
AYJ38942.1\|1839652_1840183_-	hypothetical protein	NA	NA	NA	NA
AYJ38943.1\|1840372_1840663_-	hypothetical protein	NA	NA	NA	NA
AYJ38944.1\|1840768_1841590_-	hypothetical protein	NA	NA	NA	NA
AYJ38945.1\|1841833_1842403_+	hypothetical protein	NA	NA	NA	NA
AYJ38946.1\|1842536_1843037_-	hypothetical protein	A0A097BY45	Enterococcus_phage	3.7e-22	35.5
AYJ38947.1\|1843058_1843382_-	DUF771 domain-containing protein	E9LUT3	Lactobacillus_phage	1.8e-25	50.0
AYJ38948.1\|1843736_1844162_-	hypothetical protein	K4I239	Lactobacillus_phage	2.2e-63	79.3
AYJ38949.1\|1844459_1844912_-	hypothetical protein	A8ASP3	Listeria_phage	1.9e-12	59.2
AYJ38950.1\|1845326_1845662_-	hypothetical protein	NA	NA	NA	NA
AYJ38951.1\|1845648_1846353_-	hypothetical protein	A0A2D1GP81	Lactobacillus_phage	8.4e-36	39.5
AYJ38952.1\|1846498_1847419_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	1.2e-42	37.5
AYJ38953.1\|1848266_1848710_-	single-stranded DNA-binding protein	A0A1U9WQM3	Geobacillus_phage	1.8e-15	36.1
AYJ38954.1\|1848706_1849465_-	hypothetical protein	D7RWM8	Brochothrix_phage	3.7e-13	37.5
AYJ38955.1\|1849619_1849799_-	hypothetical protein	NA	NA	NA	NA
AYJ38956.1\|1849814_1850015_-	hypothetical protein	NA	NA	NA	NA
AYJ38957.1\|1850001_1850259_-	hypothetical protein	NA	NA	NA	NA
AYJ38958.1\|1850429_1850690_-	hypothetical protein	NA	NA	NA	NA
AYJ40126.1\|1850710_1851439_-	hypothetical protein	A0A1P8BM06	Lactococcus_phage	2.9e-47	43.3
AYJ38959.1\|1851454_1851664_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYJ38960.1\|1851917_1852322_+	XRE family transcriptional regulator	Q9T1J3	Lactobacillus_phage	3.5e-10	36.6
AYJ38961.1\|1852331_1852808_+	hypothetical protein	NA	NA	NA	NA
AYJ38962.1\|1852852_1853263_+	hypothetical protein	NA	NA	NA	NA
AYJ38963.1\|1853368_1853941_+	hypothetical protein	NA	NA	NA	NA
AYJ38964.1\|1854106_1855270_+\|integrase	site-specific integrase	E9LUK6	Lactobacillus_phage	1.3e-65	38.4
AYJ38965.1\|1855960_1856167_-	hypothetical protein	NA	NA	NA	NA
1855271:1855366	attR	NA	NA	NA	NA
AYJ38966.1\|1856366_1857122_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AYJ38967.1\|1857256_1857604_+	hypothetical protein	NA	NA	NA	NA
AYJ38968.1\|1857692_1858904_-	MFS transporter	NA	NA	NA	NA
AYJ38969.1\|1859019_1859610_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AYJ38970.1\|1859744_1860263_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.6e-28	41.4
AYJ38971.1\|1860281_1862618_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	5.9e-70	31.3
AYJ38972.1\|1862639_1862990_-	LapA family protein	NA	NA	NA	NA
AYJ38973.1\|1863002_1863794_-	SDR family oxidoreductase	NA	NA	NA	NA
AYJ38974.1\|1863803_1864739_-	ribonuclease Z	NA	NA	NA	NA
AYJ38975.1\|1865139_1865424_+	hypothetical protein	NA	NA	NA	NA
AYJ38976.1\|1865579_1866875_-	GTPase ObgE	NA	NA	NA	NA
AYJ38977.1\|1867122_1867878_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.6e-21	31.8
AYJ38978.1\|1867874_1868792_+	1-phosphofructokinase	NA	NA	NA	NA
AYJ38979.1\|1868813_1870748_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
AYJ38980.1\|1872311_1874126_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AYJ38981.1\|1874334_1875075_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-30	36.1
AYJ38982.1\|1875067_1876546_-	ABC transporter permease subunit	NA	NA	NA	NA
AYJ38983.1\|1876751_1876919_+	hypothetical protein	NA	NA	NA	NA
AYJ38984.1\|1877122_1877530_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
AYJ38985.1\|1877667_1877964_-	nucleotide pyrophosphohydrolase	A0A1S7FYY8	Listeria_phage	1.7e-22	51.6
AYJ38986.1\|1877965_1878559_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
AYJ38987.1\|1878722_1879988_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.4e-142	59.1

DBSCAN-SWA_5

2133736 : 2168451

Oenococcus_phage(46.67%)

holin,head,portal,capsid,terminase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ39211.1\|2133736_2134120_-\|holin	holin	A0A2H4PBB2	Lactobacillus_phage	9.9e-15	80.0
AYJ39212.1\|2134106_2134403_-	hypothetical protein	A0A2K9VCD4	Lactobacillus_phage	2.4e-37	73.5
AYJ40134.1\|2134403_2135519_-	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	1.8e-32	58.4
AYJ39213.1\|2135697_2136132_-	hypothetical protein	NA	NA	NA	NA
AYJ39214.1\|2136134_2136584_-	DUF1617 family protein	A0A2P0ZLE0	Lactobacillus_phage	1.8e-23	41.1
AYJ39215.1\|2136601_2141818_-	hypothetical protein	Q6SE68	Lactobacillus_prophage	2.8e-144	59.4
AYJ39216.1\|2141832_2142195_-	hypothetical protein	V5UQS8	Oenococcus_phage	1.9e-44	71.2
AYJ39217.1\|2142208_2148040_-\|tail	phage tail protein	V5URV5	Oenococcus_phage	1.7e-227	40.9
AYJ40135.1\|2148055_2148313_-	hypothetical protein	V9QKH3	Oenococcus_phage	1.6e-21	65.0
AYJ39218.1\|2148420_2148819_-	hypothetical protein	V9QJA0	Oenococcus_phage	4.3e-45	74.4
AYJ39219.1\|2148918_2149395_-\|tail	phage tail protein	V5USQ9	Oenococcus_phage	3.0e-45	60.4
AYJ39220.1\|2149403_2149769_-	hypothetical protein	V5UQS4	Oenococcus_phage	3.0e-29	54.2
AYJ40136.1\|2149768_2150320_-	HK97 gp10 family phage protein	V5URV0	Oenococcus_phage	1.8e-65	62.3
AYJ39221.1\|2150312_2150672_-	hypothetical protein	V5US85	Oenococcus_phage	2.0e-33	57.6
AYJ39222.1\|2150671_2151004_-	hypothetical protein	V9QJ97	Oenococcus_phage	4.4e-11	43.2
AYJ39223.1\|2151015_2151192_-	conjugal transfer protein	NA	NA	NA	NA
AYJ39224.1\|2151204_2152227_-\|capsid	minor capsid protein E	V5US24	Oenococcus_phage	4.5e-115	62.1
AYJ39225.1\|2152247_2152595_-	hypothetical protein	V5UTH9	Oenococcus_phage	7.0e-28	60.0
AYJ39226.1\|2152609_2153287_-	DUF4355 domain-containing protein	Q6SE80	Lactobacillus_prophage	8.7e-14	30.3
AYJ39227.1\|2153458_2153665_-	hypothetical protein	NA	NA	NA	NA
AYJ39228.1\|2153716_2153917_-	hypothetical protein	NA	NA	NA	NA
AYJ39229.1\|2153969_2155655_-\|head	phage head morphogenesis protein	V5US81	Oenococcus_phage	6.5e-119	57.8
AYJ39230.1\|2155801_2156098_-\|protease	ribosomal-processing cysteine protease Prp	D2J003	Enterococcus_phage	2.5e-10	39.2
AYJ39231.1\|2156054_2157536_-\|portal	phage portal protein	V9QKI8	Oenococcus_phage	4.4e-135	50.9
AYJ40137.1\|2157546_2158788_-\|terminase	PBSX family phage terminase large subunit	X2CYF4	Lactobacillus_phage	8.4e-140	58.3
AYJ39232.1\|2158774_2159665_-\|terminase	terminase	V5URT8	Oenococcus_phage	4.6e-55	50.7
AYJ39233.1\|2159841_2160114_-	hypothetical protein	A0A2D2W301	Escherichia_phage	6.8e-18	49.4
AYJ39234.1\|2160418_2160922_-	molecular chaperone Tir	NA	NA	NA	NA
AYJ40138.1\|2160905_2161763_-	hypothetical protein	NA	NA	NA	NA
AYJ39235.1\|2162386_2162848_-	transcriptional regulator	D6PSV8	Lactobacillus_phage	8.2e-40	57.0
AYJ39236.1\|2162975_2163143_-	hypothetical protein	E9LUP4	Lactobacillus_phage	5.6e-15	93.6
AYJ39237.1\|2163135_2163558_-	DUF1642 domain-containing protein	A0A1S5RCV9	Lactobacillus_phage	1.6e-45	71.0
AYJ39238.1\|2163734_2163893_-	hypothetical protein	A0A2P0ZLB5	Lactobacillus_phage	6.0e-19	94.2
AYJ39239.1\|2163885_2164266_-	hypothetical protein	NA	NA	NA	NA
AYJ39240.1\|2164262_2164781_-	hypothetical protein	O03915	Lactobacillus_phage	1.1e-35	51.6
AYJ39241.1\|2165504_2165792_-	hypothetical protein	NA	NA	NA	NA
AYJ39242.1\|2165788_2166754_-	DnaD domain protein	NA	NA	NA	NA
AYJ39243.1\|2166779_2167640_-	hypothetical protein	A0A0P0IZH9	Lactobacillus_phage	1.9e-74	49.4
AYJ39244.1\|2167563_2168451_-	recombinase RecT	E9LUM3	Lactobacillus_phage	1.9e-61	47.7

DBSCAN-SWA_6

2319619 : 2387105

Shigella_phage(15.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ39390.1\|2319619_2320504_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.9e-16	28.6
AYJ39391.1\|2320527_2320920_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYJ39392.1\|2321041_2321926_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.9e-16	28.6
AYJ39393.1\|2321949_2322627_-\|transposase	transposase	NA	NA	NA	NA
AYJ39394.1\|2323148_2323924_-\|transposase	IS5-like element ISLpl3 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.1e-27	53.2
AYJ39395.1\|2324121_2325285_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.1e-54	33.8
AYJ39396.1\|2325652_2326030_+	MerR family transcriptional regulator	NA	NA	NA	NA
AYJ39397.1\|2326115_2327060_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
AYJ39398.1\|2327515_2327863_+	SdpI family protein	NA	NA	NA	NA
AYJ39399.1\|2327981_2329469_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	4.9e-78	37.6
AYJ39400.1\|2329523_2329640_+	amino acid permease	NA	NA	NA	NA
AYJ39401.1\|2329692_2331060_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AYJ39402.1\|2331154_2332327_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
AYJ39403.1\|2332331_2333201_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AYJ39404.1\|2333271_2333406_+	hypothetical protein	NA	NA	NA	NA
AYJ39405.1\|2333649_2334423_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AYJ39406.1\|2334549_2335446_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYJ39407.1\|2335605_2336247_-	SDR family oxidoreductase	NA	NA	NA	NA
AYJ39408.1\|2336383_2336881_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYJ39409.1\|2337047_2340797_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	5.7e-14	22.8
AYJ39410.1\|2340789_2344392_-	ATP-dependent helicase	NA	NA	NA	NA
AYJ39411.1\|2344508_2344985_-	MerR family transcriptional regulator	NA	NA	NA	NA
AYJ39412.1\|2345037_2345994_-	DMT family transporter	NA	NA	NA	NA
AYJ39413.1\|2346388_2347027_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
AYJ39414.1\|2347028_2347742_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
AYJ39415.1\|2347738_2348656_-	dihydroorotate dehydrogenase	NA	NA	NA	NA
AYJ39416.1\|2348698_2351875_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AYJ39417.1\|2351867_2352962_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	8.1e-54	34.9
AYJ39418.1\|2352958_2354251_-	dihydroorotase	NA	NA	NA	NA
AYJ39419.1\|2354254_2355190_-	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	5.0e-28	32.7
AYJ39420.1\|2355334_2355877_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
AYJ39421.1\|2356706_2358296_+	PucR family transcriptional regulator	NA	NA	NA	NA
AYJ39422.1\|2358555_2359896_+	purine permease	Q9KX94	Enterobacteria_phage	1.4e-34	29.3
AYJ39423.1\|2360007_2360262_-	hypothetical protein	NA	NA	NA	NA
AYJ39424.1\|2361263_2362547_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.6e-43	30.4
AYJ39425.1\|2362653_2363556_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AYJ39426.1\|2363866_2364700_+	EAL domain-containing protein	NA	NA	NA	NA
AYJ39427.1\|2364683_2365202_+	hypothetical protein	NA	NA	NA	NA
AYJ39428.1\|2365216_2366545_+	glycosyltransferase	NA	NA	NA	NA
AYJ39429.1\|2366809_2367484_-	methionine synthase	NA	NA	NA	NA
AYJ39430.1\|2367666_2368905_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AYJ39431.1\|2368928_2370461_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	E3SNU8	Prochlorococcus_phage	3.9e-46	52.9
AYJ39432.1\|2370462_2371041_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-21	33.7
AYJ39433.1\|2371033_2372059_-	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	5.4e-60	42.1
AYJ39434.1\|2372055_2373510_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-50	33.8
AYJ39435.1\|2373494_2375714_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.7e-146	39.7
AYJ39436.1\|2375706_2376387_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
AYJ39437.1\|2376386_2376641_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AYJ39438.1\|2376642_2377374_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4SM18	Cyanophage	6.7e-36	37.3
AYJ39439.1\|2377376_2378507_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AYJ39440.1\|2378490_2378976_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.1e-16	39.7
AYJ39441.1\|2379295_2380621_-	NADPH-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.8e-56	59.8
AYJ39442.1\|2380636_2381245_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.1e-59	60.2
AYJ39443.1\|2381480_2382488_-	lipoate--protein ligase	NA	NA	NA	NA
AYJ39444.1\|2382499_2383303_-	tyrosine-protein phosphatase	NA	NA	NA	NA
AYJ39445.1\|2383927_2384563_+	carbonic anhydrase family protein	NA	NA	NA	NA
AYJ39446.1\|2384586_2385396_+	alpha/beta hydrolase	NA	NA	NA	NA
AYJ39447.1\|2385519_2386197_+\|transposase	transposase	NA	NA	NA	NA
AYJ39448.1\|2386220_2387105_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.9e-16	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032745

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032744

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection