CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP032762	Rhodococcus sp. P1Y chromosome, complete genome	11 crisprs	csa3,RT,WYL,cas3,cas4,DEDDh,DinG	0	3	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP032762_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_1

117814-117911

Unclear

Consensus_repeat	Method
CTCATTCAAGCGAAGCGCGCCGAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of CP032762_1

>merge|CP032762|1|117814-117911|CRISPRCasFinder
CTCATTCAAGCGAAGCGCGCCGACAGTCGCCATCGCTTGAATGGTCCATCCATACGATCTGATAGCTACGAGGACTCATTCAAGCGGAGCGCGCCGAC

>CP032762|1|1|117814-117911|CRISPRCasFinder
CTCATTCAAGCGAAGCGCGCCGAC	AGTCGCCATCGCTTGAATGGTCCATCCATACGATCTGATAGCTACGAGGA
CTCATTCAAGCGGAGCGCGCCGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47064.1\|112922_113372_+\|flavodoxin	unknown	unknown	gnl\|CDD\|180484
CP032762.1\|AYJ47072.1\|121226_121814_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47075.1\|125684_126026_-\|pilus-assembly-protein-TadE	unknown	unknown	gnl\|CDD\|274799
CP032762.1\|AYJ47067.1\|114677_115187_+\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|378696
CP032762.1\|AYJ47077.1\|126330_126531_-\|DUF4244-domain-containing-protein	unknown	unknown	gnl\|CDD\|379429
CP032762.1\|AYJ47070.1\|117184_117718_-\|DUF3558-domain-containing-protein	unknown	unknown	unknown
CP032762.1\|AYJ47068.1\|115362_116550_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
CP032762.1\|AYJ47069.1\|116595_117135_-\|DUF3558-domain-containing-protein	unknown	unknown	gnl\|CDD\|378803
CP032762.1\|AYJ47076.1\|126022_126310_-\|pilus-biosynthesis-protein-TadE	unknown	unknown	unknown
CP032762.1\|AYJ47063.1\|111957_112725_+\|hydroxypyruvate-isomerase	unknown	unknown	gnl\|CDD\|226149
CP032762.1\|AYJ47061.1\|109822_110791_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP032762.1\|AYJ47071.1\|118066_121084_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236048
CP032762.1\|AYJ47074.1\|122622_124986_+\|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl\|CDD\|274800
CP032762.1\|AYJ47062.1\|110933_111956_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|275173
CP032762.1\|AYJ47079.1\|127157_127955_-\|type-ii-secretion-system-integral-membrane-subunit	unknown	unknown	gnl\|CDD\|227300
CP032762.1\|AYJ51402.1\|125158_125644_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|379194
CP032762.1\|AYJ47065.1\|113385_113676_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47066.1\|113888_114590_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181335
CP032762.1\|AYJ47073.1\|121970_122174_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
CP032762.1\|AYJ47078.1\|126588_127167_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ47064.1\|112922_113372_+\|flavodoxin	gnl\|CDD\|180484	PRK06242, PRK06242, flavodoxin; Provisional.	4.30808e-68
CP032762.1\|AYJ47067.1\|114677_115187_+\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	8.26244e-14
CP032762.1\|AYJ47077.1\|126330_126531_-\|DUF4244-domain-containing-protein	gnl\|CDD\|379429	pfam14029, DUF4244, Protein of unknown function (DUF4244). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 66 and 95 amino acids in length. There is a conserved EYA sequence motif.	4.36989e-17
CP032762.1\|AYJ47078.1\|126588_127167_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	5.21946e-07
CP032762.1\|AYJ47068.1\|115362_116550_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	0
CP032762.1\|AYJ47069.1\|116595_117135_-\|DUF3558-domain-containing-protein	gnl\|CDD\|378803	pfam12079, DUF3558, Protein of unknown function (DUF3558). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 177 to 195 amino acids in length.	6.89333e-05
CP032762.1\|AYJ47063.1\|111957_112725_+\|hydroxypyruvate-isomerase	gnl\|CDD\|226149	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism].	2.32952e-92
CP032762.1\|AYJ47061.1\|109822_110791_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.77044e-79
CP032762.1\|AYJ47071.1\|118066_121084_-\|type-I-DNA-topoisomerase	gnl\|CDD\|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
CP032762.1\|AYJ47075.1\|125684_126026_-\|pilus-assembly-protein-TadE	gnl\|CDD\|274799	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein. Members of this small, highly hydrophobic protein family occur in a pilus/secretion-like region that usually is next to an uncharacterized DEAH-box helicase, in Actinobacteria. Members show sequence similarity to the TadE-like family described by pfam07811. The function is unknown. [Unknown function, General].	1.08979e-16
CP032762.1\|AYJ47062.1\|110933_111956_+\|dehydrogenase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	7.08684e-106
CP032762.1\|AYJ47079.1\|127157_127955_-\|type-ii-secretion-system-integral-membrane-subunit	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	4.78076e-22
CP032762.1\|AYJ51402.1\|125158_125644_+\|MaoC-family-dehydratase	gnl\|CDD\|379194	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase. It is clear from the structures of bacterial members of MaoC dehydratase, pfam01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerize to form a whole. Divergence of the N- and C- monomers in higher eukaryotes has led to two distinct domains, this one and MaoC_dehydratas. However, in order to function as an enzyme both are required together.	6.59172e-36
CP032762.1\|AYJ47073.1\|121970_122174_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.09554e-36
CP032762.1\|AYJ47066.1\|113888_114590_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|181335	PRK08264, PRK08264, SDR family oxidoreductase.	1.37543e-98
CP032762.1\|AYJ47074.1\|122622_124986_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0

>CP032762.1|AYJ47070.1|117184_117718_-|DUF3558-domain-containing-protein
MRNEFAIMLSALVLASCAQGCSTDVAGNATTSVEAAGASSITEMVPAEAAGFDPCDLPTELLEDLNLSGVVPTSAGPSGCIWGNDRFALGVLLVEDTTMLPDPSSSPVVSRLETLSDGGYVTHLFVLDEDTYTTQTMTRDGAVVLNATVAGSDSMESERDSLVDTFRTVLPYFPAPE
>CP032762.1|AYJ47069.1|116595_117135_-|DUF3558-domain-containing-protein
MKKKLLVLLCFLALSGCSETVKGKATVEDVWRGQGVVSSKPTTTAPHSGAPHSGASNRPSSFDPCAYDDSVLEYYVEVDPSTKVELPGGCQWRGEGLAFTAAALRDEDVDVLAADPNVDELAELESAGRTARVFVFDDKMCMALTEIDEGLAQFMLIEARFDPSCFNFRVVLRLLLPEL
>CP032762.1|AYJ47068.1|115362_116550_-|DNA-polymerase-III-subunit-delta'
MAGVFGRLIGQEDVEAELTGAAVGARNGDTGSAMTHSWLFTGPPGSGRSIAALCFAAALQCTTEGVPGCGECHACTTTMAGTHGDVRRIIPQGLSISVKEMREIVQIAARRPSTGKWQIVVIEDADRLSEAAANALLKVVEEPPARTVMLLCAPSTDPEDMSVTLRSRCRHVHLVTPTAAAIAHVLQTRDKLDEKTAEWAASISGGHVGRARRLAKDEDARSRRTRALGLASAAARPNQAYLAAEEMVKAAETEAAEISAALDGVEMEELRTALGAGGTGKGAAGALRGSAGVIKELEARQKSRRTRNLRDSFDRALIDLAGLYRDALARSYGSTAVLNHPDMSEQIERMARGASPEALLKSIEAILECREALALNAKPKFAVYAMVAQLGAALR
>CP032762.1|AYJ47067.1|114677_115187_+|CGNR-zinc-finger-domain-containing-protein
MSPTSRFHLAPAPDGLGRVQDLLNTRAIGVYDFPDLLADGATASKALHVELSDADAGQLRDLRHVVEELIAGIAPSPVSVAASLEPDDAGVVQLRPSGRGWKYVASEIWSEILLAQRADTWRRLKRCKNELCGSAFYDRSRNNSGVWHDVKTCGNQANLRASRARRKSE
>CP032762.1|AYJ47066.1|113888_114590_-|SDR-family-NAD(P)-dependent-oxidoreductase
MVAIEGAVVLVTGGQRGLGKSIVDEFVARGAAKVYATARSPKPSDDARIVSEQLDVTDPHSVGALAEKLTDVTIVVNNAGTTGSEPLVATSLDAVRTVFETNFFGALLVAQSFAPTLQSNGGGALVDIHSALSWVSGAGAYGASKAALWSATNSLRLELAPQGTLVTGVHLGYTDTDMIADLDVPKNDPRDVAKAIADAVEKGETEVLADDVSRYFKSILAGPVEGLSITAGA
>CP032762.1|AYJ47065.1|113385_113676_-|hypothetical-protein
MTSRLPDVFSPSATEYGEPVRVDDRTTILPVSRRSARGRETAVGLFTVTDGTATWTPAVDMGRVNLIGVLTGFVAATLGCAAVLRRPPWPNVTIER
>CP032762.1|AYJ47064.1|112922_113372_+|flavodoxin
MGKSVIVCTSVAHGNTRKIADALAGVLDADIVSPADADLEGAELVGFGSGIYLGKFHADLLDFIDSLPQQNGRRAFVFATSGLPESRLFRYSSRIVDALESKGFEVVAGFSSRGFDTYGPFKLVGGIRKGRPNAEDLASARAFAEHLQD
>CP032762.1|AYJ47063.1|111957_112725_+|hydroxypyruvate-isomerase
MILAASAEMLYLELPFVDRVKRISERGFQVEIWNWATKDIDALASSGATFSSMTGYLEGNLTEPDGIEQLLSTAAESLVVADKLDCPRLNLHGTGLDGDGLPVRPVDVVTPTMWLTAVETLRSIAALGEKAGRVFTLENLNLAVDHPRTPFAAASDTLALVRAVDSPNLKMNLDLYHAQIGEGNLIALLEEALPYVGEIQVADVPGRCEPGTGEINYPAIARALRRIGYDGVVGLEGWASGDPETALDAFEAAFA
>CP032762.1|AYJ47062.1|110933_111956_+|dehydrogenase
MTSSAAAVRVALIGAGRIGKNHAEIVARRVPGAVLEAVVDPVDGAARALADSLDVTKAYTSVDDALGDADIDAVVISAPARSHADLVVASAGAGKHVFVEKPMAVTLEDADRAITAAETAGVVLQVGFNRRFAPAFAAARKAIDDGKIGTPQLLRSLTRDPGPFGGDPSRIPPWTIFFETLIHDFDTLLFLNPGAKAVRVTAVADALVRPDAKGSGHLDTAVVTVQFDNGAIATAEANFSALYGYDVRGEVFGSEGMVTAGDGRSTNMTLYGAAGLHVDTARSDTELLRSAYIGEFTAFVDAIRFGTGSVVTGQDARAALEIALACIRSVETGAAVALEA
>CP032762.1|AYJ47061.1|109822_110791_-|LacI-family-transcriptional-regulator
MADVARIAGVSPALVSIVMRGVEGASVDTRARIKAIADDIGYVPDRRAQKLRQASSRLIGVTFDLEQPFHSDLVEHIYSASERHGYDVTLSAVAPTRDESRAVQALLRERCEAVVLLGSHLSATDLKDIDGRAPVVELLKSTDGISSVRSDDVAGTELAVEHLIKLGHKQIAHIDGRRAPGADDRRHGFSAAMWRHGLEPVIVDGGITETEGAEGMRTLLGSEVVPTAVVAFNDNSATGVLDLLLRRGIDVPGEISVVGYDDSRLARIAHINLTSVSQDVEGLADAAVDSVLGRIGGGEPVGVVLAPKLVRRGTVAPPPVRA
>CP032762.1|AYJ47071.1|118066_121084_-|type-I-DNA-topoisomerase
MATRKNGTGDTTTGGSVEPRRLVIVESPTKAKKIAPYLGKNYVVEASVGHIRDLPRGAADVPAKYKGEPWARLGVDVDHDFEALYVVSPEKKGKVAELKSLLKDADELFLATDPDREGEAIAWHLLETLNPKIPVRRMVFHEITKPAILAAAADTRELDQDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVATRIIVQRERDRMAFRSAEYWDISATLDAGADASPRSFGARLVNVDGSRIAAGRDFGADGKLKSEGVTVIDEPRARRLAEALEGVDLTVASAEDKPYTRKPYPPFMTSTLQQEAGRKLRFSSERTMRVAQRLYENGYITYMRTDSTTLSESAIAAARSQATELYGPEYVHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSALQTDEFRLYELIWQRTVASQMADLRGTTLTLRITGTAATGEDCTFSASGRTITFAGFLKAYVESVDDEAGGQSDDAESRLPALKAGAAVVATKLDPDGHTTNPPARYTEASLIKTLEELGIGRPSTYASIIKTILDRGYVYKRGSALVPSWVAFSVIALLEAHFGRLVDFDFTAGMEDDLDAIAGGRERRGNWLTNFYFGGDTGAEGSVARSGGLKKMVGTNLEDIDARVINSIRLFDDDQGREIHVRVGRYGPYLERMVKNDDDPDGDPISQRANLPDDLPPDELTLEFAEKLFATPQAGRKLGADPLTGNEIVAKEGRFGPYVTEILPEPEPEPTPPEPDIVPIPSDEGGGGTKTATKTAAKKAPAKKAAKKATGPKPRTGSLLKSMDLATITLEDALKLLSLPRVVGLDPESKDLITAQNGRYGPYLKKGTDSRSLTDEEQLFTVTLEEALKIYAEPKRRGRQGEAKPPLRELGVDPISEAPMVIKDGRFGPYVTDGETNASLRKDDDVATITDDRASELLADRRARGPVKKKATKKATKKATATKTATKKAPAKKAAAKTTAAKKTPAKKAPAKKAASKTAASKTAAAKKAPPAE
>CP032762.1|AYJ47072.1|121226_121814_-|hypothetical-protein
MNQLSFFSAESLPPSVTDLSGLLASTGQVVLSAAGARISVVVDAYWRAEAIADLIAECGLVSEVGRSEEDRPLVRTASVPELSALASQWTKGAVKAMPPGWVPGSRELRAWVLAAGRPEAEGERYVLGLDPHAPETHAPLAQALMRAGIAPTLIGTRGSMPGLRITGRRRMLRLVENVGRAPENADACTSWPTAE
>CP032762.1|AYJ47073.1|121970_122174_-|cold-shock-protein
MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQRVEFEVGQGTKGPQATGVRAV
>CP032762.1|AYJ47074.1|122622_124986_+|DEAD/DEAH-box-helicase
MTQPDPSNQGPSSSYGRSLLDRVLAGTPQGEHPLTHVAELPGRVAQFADWPTWLKPEVRAVLQSRGIPSPWTHQAAAATLANDGHHVVLSTGTASGKSLAYQMPILSTLLGDARATALYLAPTKALGADQLRNTVAITDELRGDAPELAEVFASAYDGDTPIEIRQWARANARWIFTNPDMIHIGILGAHERWARFLRNLRFVVVDECHYYRGVFGSNVALILRRLRRICARYGASPTFVLASATTSNPGLAASRLVGAPCEEVTEDGSPHGPRTVALWEPPLLKEITGENGAPVRRSAGAESSRIMADLMIEGARTLTFVRSRRGAEVTALGTQRLLADVDRDLPNRVAAYRAGYLAEDRRTLESNLSDGTLLGVATTNALELGVDIAGLDAVVVAGFPGTVSSFWQQAGRSGRRGEGSLVTLVARDDPLDTYLVHHPAALLDKPIEATVTDPANPYLLGPQMLCAAAELPITTEEAREFQAGAVLDRLASDGLVRKRPHGWFITPEGQKYAPHASVNIRGGTGTQVAIVDGGSGRMLGTVDSGKAPGTVHPGAVHIHQGESFVVDELDLEDGLALVHAEQPDWHTSARETTDIAVTAVHSQRILGEVTVALVQVNVTHQVVGYLRRLHSGEILDSIELDMPEQTLDTRAVMYTITPELLIDKGIPAERFPGSLHAAEHAAIGLLPLVATCDRWDIGGVSTALHPDTGLPTVFVYDGYDGGAGFADRGHRAIVEWLEATRDAITACECPTGCPSCVQSPKCGNGNDPLDKAGAVIVLQAVLDAAHS
>CP032762.1|AYJ51402.1|125158_125644_+|MaoC-family-dehydratase
MVGKHHIAASAYEIGREKIREFARSVHDDHPAHTDDEAARKLGHGGIIAPVTFVSIIGTAVLPELFANLLIGYGLGDILHSDQQMVLHRPIRVGDILTSDLCLEAFRQAGGSDIMVTANDITDEFGEPVATTKTTFVARTGGRGDDGGFGDLLDGIMRRGG
>CP032762.1|AYJ47075.1|125684_126026_-|pilus-assembly-protein-TadE
MRAKDEGGVTVLAAFALTALLVVVIAVVHVGSAVSARHRAQSAADLSALAAASALDRGAADACSTAEELAARMEGTLSDCVIDGWDVVVEVSISVPLGRFGVRDAVASARAGP
>CP032762.1|AYJ47076.1|126022_126310_-|pilus-biosynthesis-protein-TadE
MEAAIALASIVTVVVTCIGAILAVSLHVRCVDAARESARLVARGDAASEQLLPEGAAMTVSEQDGFITVRVEADTALPGLTVSAEAVAVAEERPE
>CP032762.1|AYJ47077.1|126330_126531_-|DUF4244-domain-containing-protein
MNNVLSQVKTRLLLAVVEDDGMSTAEYAIGTIAAAAFGAILYTVVTGGSIVGALTGIIERALNTAV
>CP032762.1|AYJ47078.1|126588_127167_-|type-II-secretion-system-F-family-protein
MPMTGAALLCWAAALVFVPIGFGPLGRLSRADAPHGAEAKTDSADPHATATTFDMMAACLRGGLPAGAAAHAVAAIAPGAASVALRTTADLLKLGADPDLAWAPVAAEPRIEALARMARRSARSGASFADAVSELALAERIRAEDAAAAAAERAGVLISGPLGLCFLPAFVCLGIVPVVVGLARNVLGGGLL
>CP032762.1|AYJ47079.1|127157_127955_-|type-ii-secretion-system-integral-membrane-subunit
MSGVALLLGAAALFAAPNPKVRLQILGRPALGIGLGIRHRAAVLVVSVIGAAVVLAFSCGVSVALAAAIVAATLWTRRRAAVRRRTHRAEVESLVAGLDTIVGELGVGAHPATAASVAASECSGTAAAAFGRASGRARLGGTAHDGLRVNDSPVSDELAIVAAAWQISDDHGLGLVGLLTAARADMMARSRFRDRTHASLAGARATGTVLACLPVVGVGLGQAMDASPIGVLLGGGLGGVLLAIGSALVCAGLLWTDAIADRVCR

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Crispr_ID: CP032762_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_2

250352-250448

Orphan

Consensus_repeat	Method
ATCGCTTGAATGGTCCATTCATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_2

>merge|CP032762|2|250352-250448|CRISPRCasFinder
ATCGCTTGAATGGTCCATTCATACGGTCAGATAGCTTCGGCGGTCCATTCAAGCAGCGGCCGAACCCGTGCACCATCGCTTGAATGGTCCATTCATA

>CP032762|2|2|250352-250448|CRISPRCasFinder
ATCGCTTGAATGGTCCATTCATA	CGGTCAGATAGCTTCGGCGGTCCATTCAAGCAGCGGCCGAACCCGTGCACC
ATCGCTTGAATGGTCCATTCATA

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47184.1\|255147_255471_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47186.1\|257402_259193_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP032762.1\|AYJ47183.1\|253391_254360_+\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|235824
CP032762.1\|AYJ47170.1\|244129_244585_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
CP032762.1\|AYJ47176.1\|249152_249641_-\|FBP-domain-containing-protein	unknown	unknown	gnl\|CDD\|379860
CP032762.1\|AYJ47171.1\|244917_245817_+\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
CP032762.1\|AYJ47181.1\|252318_252771_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
CP032762.1\|AYJ47169.1\|243403_244036_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|188483
CP032762.1\|AYJ47178.1\|250481_251198_-\|siderophore-interacting-protein	unknown	unknown	gnl\|CDD\|99790
CP032762.1\|AYJ47173.1\|246730_247741_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236135
CP032762.1\|AYJ47182.1\|252773_253337_-\|tRNA-adenosine-deaminase	unknown	unknown	gnl\|CDD\|274869
CP032762.1\|AYJ51417.1\|254332_254881_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377662
CP032762.1\|AYJ47177.1\|249664_250237_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
CP032762.1\|AYJ47179.1\|251212_251863_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP032762.1\|AYJ47175.1\|248665_249127_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
CP032762.1\|AYJ47185.1\|255571_257410_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP032762.1\|AYJ47180.1\|252027_252225_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
CP032762.1\|AYJ47172.1\|245797_246487_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
CP032762.1\|AYJ47174.1\|247737_248646_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224423
CP032762.1\|AYJ47168.1\|241087_243391_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ47186.1\|257402_259193_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.14878e-148
CP032762.1\|AYJ47183.1\|253391_254360_+\|prephenate-dehydrogenase	gnl\|CDD\|235824	PRK06545, PRK06545, prephenate dehydrogenase; Validated.	3.50438e-109
CP032762.1\|AYJ47170.1\|244129_244585_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.51323e-43
CP032762.1\|AYJ47176.1\|249152_249641_-\|FBP-domain-containing-protein	gnl\|CDD\|379860	pfam16571, FBP_C, FBP C-terminal treble-clef zinc-finger. FBP_C is a family from the C terminal end of fibronectin-binding proteins. It forms an extended four-cysteine zinc-finger with a unique structural fold. Fibronectin-binding proteins bind to elongation factor G - EF-G, which is mediated by the zinc-finger binding to the C-terminus of EF-G. FBPs release ribosomes by competing with them for EF-G.	1.14544e-76
CP032762.1\|AYJ47171.1\|244917_245817_+\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	2.55148e-45
CP032762.1\|AYJ47181.1\|252318_252771_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.94335e-56
CP032762.1\|AYJ47169.1\|243403_244036_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|188483	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator. Members of this family are TetR family putative transcriptional regulators that occur in genome contexts near proteins of the mycofactocin system. These include the precursor peptide (TIGR03969), a radical SAM peptide maturase (TIGR03962), and a putative carrier protein (TIGR03967). [Regulatory functions, DNA interactions].	7.54e-18
CP032762.1\|AYJ47178.1\|250481_251198_-\|siderophore-interacting-protein	gnl\|CDD\|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	6.75869e-47
CP032762.1\|AYJ47173.1\|246730_247741_+\|PHP-domain-containing-protein	gnl\|CDD\|236135	PRK07945, PRK07945, PHP domain-containing protein.	0
CP032762.1\|AYJ47182.1\|252773_253337_-\|tRNA-adenosine-deaminase	gnl\|CDD\|274869	TIGR03941, conserved_hypothetical_protein, putative tRNA adenosine deaminase-associated protein. This model describes a protein family about 200 amino acids in length with only five invariant residues, including an Arg, a Ser-Asp pair, and two Gly residues. Members always are found exclusively in Actinobacteria, and always adjacent to homologs of TadA, a tRNA-specific adenosine deaminase from Escherichia coli. Homology, phyletic pattern, and gene neighborhood together suggest a housekeeping function in tRNA metabolism. [Unknown function, General].	1.77133e-56
CP032762.1\|AYJ51417.1\|254332_254881_-\|hypothetical-protein	gnl\|CDD\|377662	pfam06475, Glycolipid_bind, Putative glycolipid-binding. This family has a novel fold known as a spiral beta-roll, consisting of a 15-stranded beta sheet wrapped around a single alpha helix. It forms dimers. It has some structural similarity to the E. coli lipoprotein localization factors LolA and LolB. Its structure suggests that it may have a role in glycolipid binding. Its genomic context supports a role in glycolipid metabolism.	9.52258e-62
CP032762.1\|AYJ47177.1\|249664_250237_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	1.08959e-15
CP032762.1\|AYJ47179.1\|251212_251863_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.85327e-12
CP032762.1\|AYJ47175.1\|248665_249127_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	7.89138e-05
CP032762.1\|AYJ47185.1\|255571_257410_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.97997e-160
CP032762.1\|AYJ47180.1\|252027_252225_-\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	5.24314e-06
CP032762.1\|AYJ47172.1\|245797_246487_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.21141e-20
CP032762.1\|AYJ47174.1\|247737_248646_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	2.26125e-21
CP032762.1\|AYJ47168.1\|241087_243391_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	5.79171e-113

>CP032762.1|AYJ47177.1|249664_250237_-|TetR/AcrR-family-transcriptional-regulator
MARAGITVARLTEAASDMADEIGFDNVTVLALAKSFGVKDASLYSHIKNLRDLRQRVAAASLSELADRVSDAVAGRAGKDALVAFAGAYRDYAREHPGRYASTQFELDSEAASASDAHKHSHMSRAILRAYRLTEPDETDAVRLLGSTFHGFIALEASGGFSHGNGRESEQSWLRVLDVLHHALENWPSR
>CP032762.1|AYJ47176.1|249152_249641_-|FBP-domain-containing-protein
MKPITEKEIRASFVNCSKGDAKRLNVPKNLADTQWDQLDFLGWSDPSYAGRSYIVVPGDDGLVGIALKHETGGSDRAQMCTICTTTHGRGHVSLMTASKVGESGRKGNTVGTYMCSDLACSLYARGTKTPAIGNRYRENLTPDERVERAKENLNAFVGRLYS
>CP032762.1|AYJ47175.1|248665_249127_+|hypothetical-protein
MKRMLCAGVLAIVVLAGCSDDDPGLAPPASTTPVQTSSVAAAVEPASPTPAPPVESEAAGTQDAVAPPEAPTPDPIDPVLGSDRPTGEQLYVETCQQFVTAIDALAATGLTSREQAADGISAQLQANPSWTTVPPEDQQQMLRGLDAAGIGRC
>CP032762.1|AYJ47174.1|247737_248646_+|alpha/beta-fold-hydrolase
MKSLRCLALLLVFVVLAGCSGTEVRSTPPPIPTPSPALVPALSDPPIRVQYGPDKDNVGDLYLPDNGADPIPVVVMVHGGGWQQKYDMTYFGPISEAVADRGIAVWNIEYRRGTGDYRNTLADVDNATEALATTVQEAAGGRLDLDRVHVAGHSAGGQLAAWLAGRHTLDASAPGAQPKIRPRSATIMAGVFDMARAANIGGDALVPAFLGGMPDQVPDRYLVASPIAHLPIGTEVTAIHGDEDKTVSVNQSKAYVEAATAAGDRAELVILPGAGHGAFTDAGTPAWTTTVDTIAAHAATLP
>CP032762.1|AYJ47173.1|246730_247741_+|PHP-domain-containing-protein
MDPIEALREIAYWLERSRADTHRVKAYRRAADVVENLSETAFSERKRTDTWSALPGIGAKTSLIIRQAVAGEVPDYLVEKRDEAEPIGENDLLAALKGDLHTHSNWSDGGSPIDEMMRTAKRLGHEYCALTDHSPRLKVANGLSAERLRRQLDVVAELNEQLAPFRILTGIEVDILDDGSLDQDEGLLAELDVVVASVHSNLRADSDTMTRRMVNAVANPHVDVLGHCTGRLVEGGRGTRPESKFDAEVVFEGCAQFGTAVEINARPERQDPPERLIDVALERGCLFSIDTDAHAPGQLDWRGYGAVRAEARGVPAERVINTWSMTDLLAWTGGNR
>CP032762.1|AYJ47172.1|245797_246487_-|YceI-family-protein
MTKKWWIVGAVVVVVIALGAFFGPKIYASFQGDDAPAATVSTSGAQAATTDDLNGTWTIVPGDASNTTAAGYTVDEVLNGSDVTVVGSTTEVSGDVTISGDSLTAGEVTVQTNSITTDSDRRDGQFRGNIFDTATYPTATFTFDSPVDLSALPKDGTTTTVTAEGTLTLKDQSRPVSVDIEILQSGDTLIASGSIPTTWTDFGIEPPSLGFVTVEGAGSVDFLINLSSN
>CP032762.1|AYJ47171.1|244917_245817_+|sterol-desaturase-family-protein
MIGSAWNALPEPLRDPVALAIPAFALLLAIEWFAAVKLEDGTRGSYKGSDARASLGMGVVSIATTTAWKTLALVGYTALYVYVAPWHLPADAWYTWVILILGVDILFYAYHRIAHRTRVIWATHQAHHSSEYFNFSTALRQKWNNSGEIVMWLPLPLLGVPPWMVFVGFSINLVYQFWVHTERIDKLPRPIEFVFNTPSHHRVHHGNDPQYLDKNYGGIFIVWDRLFGSYADEIDRPHYGLTKPVNTYNIWTLQTHEYRSIARDVAASRSWRERVGFVLGPPGWTPSRTGTKETSSSSS
>CP032762.1|AYJ47170.1|244129_244585_-|Rrf2-family-transcriptional-regulator
MHITAKADYAVRTLLELAAAGGAPGKAEALAGAQNIPHKFLESVLSDLRRADLVRSRRGPDGGYWLARPAAEISVADVIRAVEGPLASVRGQRPEDVDYPGPAKPLQLVWLAVRANMRAVLEEVSLADIVSDEVPEFIAELTADPAAWARR
>CP032762.1|AYJ47169.1|243403_244036_-|TetR-family-transcriptional-regulator
MECVTAPTPGLRDQKKAATRDALGVAAVTLAKSRGLDAVTADAIAAEAGVSTRTFHNYFANKEEAVLHHIEVSALEWFDMLRTRPAGEPIWASLRHVAVSIVSDPDRDLTEAFAAAQLIESTPSVVAKKLEVHHSLVRVLGEAIAERTGTDIDRDLYPNLLQSAVGNAVTAALNIWTNDSEGALSPKQLVEDAFDQLQAGLPDPREQNTN
>CP032762.1|AYJ47168.1|241087_243391_-|MMPL-family-transporter
MATYLYRIGKFAFRRKGIVLPLWLAILVLAGVGAATLSGPTANSFSIPGTPAQSALDLQSERFGQAEDPLSAVSAQYVFKAPDGQTLDTPAYTAAIGATIADIDKIEQVDASAKPGGQKPLADPVAGNTAIVEQYNKLAQEDGTAPDVAAANAAALSPLNPEGNVGTIEVPISVELADVTDDLRTQLDEAAQPARDAGLTVELGGTVAQSASPPGGTSEIVGLAVAAVVLLIMFGSAAAASLPLITAIVGIGISSLAITTASGFADLSTFTPILAIMIGLAVAIDYSLFILARYRHELTLTDDREEAVGRSVGTAGSAVVFAGATVLIALVALRVVGIPFLSQMGLAAGFAVLIAVLIALTFLPAMLGLYKGKAFAGKLKFVNTTDPEDPNATPTNGLRWARALVKRPAIGLIGGIVLLGVIAGPTTGLSLALPSIATSDPATSARKAYDLIDEGFGPGRNGPLLVIADASAAPEADRAAGFGKVVDSIYEEDDVTNAQIIAVNEAGDTAQILVTPSSTPNSDATKNLVSNLRAAEPGFAESDGVSYGVTGQTALELDVSERLQDALVPYLAVVVGLAFILLMLVFRSILVPLTATVGFLLSVLATFGATVFIFQEGGLGLISNPQPIVSFMPIFLIGVVFGLAMDYQVFLVSRMREEYVHGAAAKDAVVNGFKYGARVVTSAAVIMISVFAAFMAEPDSFIKSIGFALAAAVFFDAFVVRMVIIPSVMALLGDKAWWLPKWLDKILPNVDIEGAKLKTATPKVDAA
>CP032762.1|AYJ47178.1|250481_251198_-|siderophore-interacting-protein
MGRGVEGIIMKAYKTDDYKLTVTSKEPVTDKYIRIGFTGGGLLQNHPVHPTQWVRVWFDDGNGKEGQRGYTLVRQNPEEDTFAIEFAVHYGPASRWAENAEPGDVLEATLMRGSNGSSFTIPDPTPSEFLIFGDTASLPAINTILDAIGDTPAKVWLEWQYDSDVTLPVHAGSATEVTWLQRIDDGRLLREAAEELSPAPGAFAWVACDGRSTRSIVKTLKTNHGFRKESIKSQAYWK
>CP032762.1|AYJ47179.1|251212_251863_-|GNAT-family-N-acetyltransferase
MRRVGSFLCPRCGSPTFRLSGRCAVASKVWARACSSPRARCNPRLGWNPRVEGPGVTEWVIRSPPGAGGSVDQVEIRRRRLSDLPECVRVLREVHEADRYPDRWPEDPQAWLLPDADSWIAVTDGRILGHVSLVDRDDALWVSRLLVRPGTRGQQIGELLLEAARTRGTLMLDVIEHSEHAIRLYERTGWTLIDTRPANWIMADGTRPVEHIYTSN
>CP032762.1|AYJ47180.1|252027_252225_-|CsbD-family-protein
MGLDDKIGNKAEDLGGKAKEATGAATGNEELRQEGKGDQLSSAVKDGAEKVKDAASNIKDKLTGN
>CP032762.1|AYJ47181.1|252318_252771_-|nucleoside-deaminase
MNDLELVRAALAAAGDASPADVPVGAVVFDADGHELARAANAREATGDPTAHAEVLALRAAARVHGDGWRLEGCTLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDPRLTYRPEVRGGILEDECGAVLRDFFVSKRL
>CP032762.1|AYJ47182.1|252773_253337_-|tRNA-adenosine-deaminase
MAAQRGSNNSAKAKKFDGPDSNAFDDLEGFGVAVVHEDGKWKVTPLPSSALLSLSAAETELREMRSSGAVFGLLDVDDEFFVVLRPAPSGTRLLLSDASLAGEYDIAADVLDELNIDIPDFDEDELDDIEPWPEGDMGLLTDLGLPEAVMGIIVAETDLYPDEQLGSIAQRLGFPDELAAVLDKLPR
>CP032762.1|AYJ47183.1|253391_254360_+|prephenate-dehydrogenase
MKLEPVTTAPVCVLGLGLIGGSVLQAAVRAGRTAWGYNRSADAIAGSIQAGYDTGTDLTAALTRAAESDALIVIGVPMFALDEILDAIAEHAPNNPVTDVVSVKAEVAAAVHRHGLGARYVGGHPMAGTNQSGWSAADPDLFTDAVWVVGVDDGADPDAWRAVASLALDCGSVVVPVESGEHDRAVARISHLPHVLAETLALVGAASPLALGLAAGSFRDGTRVASSSPELVRAMCEGNADALVQALDETLALLNRAREELVDERSTKTLVTAGHNARTLYEQHERFDITGVEPGDDGWLEKYRAAGRRGGVVRQIRSASPG
>CP032762.1|AYJ51417.1|254332_254881_-|hypothetical-protein
MLTWRAHDAPRMESVRVQLNGNRIKAAGRIVGGACSEHPAFSASYDLVTDENGVTRRLSLRTSVAGGEKQASVSRDDEGYWMIENSTNHQRSTYHDALDVDVVFSPFFNTLPIRRLGLHTDSTDVEVPVVYVNLLDLSIQEAGLTYSSGADGIHVLSPVSSSSVTVDADGFVLDYPGLAERI
>CP032762.1|AYJ47184.1|255147_255471_+|hypothetical-protein
MTAGGFDFAHSEQAAKARQDKATALARYVWDLGIDSSELLALPDTSRRKLARSAGITPPSTLETWTIAAELLDRKSEWAAANPDHPSARPAHADEKIMWVKPPITPW
>CP032762.1|AYJ47185.1|255571_257410_-|ABC-transporter-ATP-binding-protein
MTEQGEKDWRGVGNEESDVDPTGNLVLAGRSRRLLFSLVRPYKKQALLALAIIIVDNLAFVAGPLFIAYALDNGISAAVGGNWTPLAWTVFGYIAVGILGAITTYTFLMVSGSLSQAILFDLRKRVFKHAQLLSLSFHEKYTSGRLISRITSDVESLQTLLESALNDALSAVLSIVSIAIILVYLDLPLALIVLAGFVPLVLVTRWSQRRQRTGYRRTRVAIARVVVHFVESMGGIRAVQVFRREPRNDSILKTEDSEYRDATTAALRGMASYTGIVRWIGNLTLAIIVVFGSYRVINGHMDIGILAAYVLYLRRFYGPLDELAMVFNAYQSAAAALEKISGVLEEEPSVLAPRNPVRLENARGDIDFDTVQFAYNADRIVLPEFSLHVPAGQVVAMVGATGAGKSTLAKLLARFYDPTEGSVSLDGIDLRTLGDENMREHIVMVTQESFLFSGSVADNIRLGKPSATDAEVAAAAEAVGLTEFIATLPDGIDTDVRKRGGRLSSGQRQLVAFARVFLAAPAVIVLDEATSSLDIPSERLVQRALETVLQGRTALIIAHRLSTVAIADRVLVMEDGAIVEDGSPDDLIARHGRFADLHDAWEETMPSAPVRG
>CP032762.1|AYJ47186.1|257402_259193_-|ABC-transporter-ATP-binding-protein
MSTGVLEPQMTTLDQPNPKAAQPSSLARFLPFLAPYKWHFIFSITASLIATLTGLVIPLVIQGVIDGPITDGNFAGVWWPAALVLLLGTIDAVGIWIRRYLVSGPSSQFEISARAAVFEKLQRLSVSAHEGWESGQLLSRAIADLSSLRRFVAFVGPFIIINTVALIAGLGVLFVQSWQLGLIMAVTGIPLVIICTRFETLYRIVARDAQDQAGDVTTTVEESIQGIRVLKAFGRSAHLGRRFIREAATLRSTEMTKVRYLAILWALIVGIPPVGIGAMLAFGTYSIVQGTMTAGMLVAVMAIVAFLLWPIESFGFLLAELNNARTAADRYWEIMDTPETITGPANPVPLPRDVHGILEFHSVGFTFPDASAPLLTDVEFRIEPGETVALVGVTGSGKTALTNLVPRLFDVTSGAVTIDGIDVRTLSLADLRSVVSVAFEDPVLFSASVRENIALGRPGASDADVDEALDIAHARDFVETLPWGLDTRIGEQGMSLSGGQRQRLALARAVLGKPRILVLDDPLSALDVNTEALVQTDLRRVLTHSTTLLVAHRPSTAALADRVLYLENGRIVEQGTHERLLATSSKYRHVMGSIDD

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Crispr_ID: CP032762_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_3

494853-494932

Orphan

Consensus_repeat	Method
GGACGTAACTACGCGCGCACGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_3

>merge|CP032762|3|494853-494932|CRISPRCasFinder
GGACGTAACTACGCGCGCACGAGCAGGTTGGTCTTCGTGCGTGGGTAGTGACACTCGGACGTAACTACGCGCGCACGGGC

>CP032762|3|3|494853-494932|CRISPRCasFinder
GGACGTAACTACGCGCGCACGAGC	AGGTTGGTCTTCGTGCGTGGGTAGTGACACTC
GGACGTAACTACGCGCGCACGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47375.1\|486717_487758_-\|esterase-family-protein	unknown	unknown	gnl\|CDD\|223700
CP032762.1\|AYJ47378.1\|489433_490273_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|211332
CP032762.1\|AYJ51441.1\|490314_490908_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP032762.1\|AYJ47381.1\|494956_495928_+\|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176180
CP032762.1\|AYJ47380.1\|493784_494819_+\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
CP032762.1\|AYJ47379.1\|490979_492134_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP032762.1\|AYJ47383.1\|497338_497920_+\|bacterial-proteasome-activator-family-protein	unknown	unknown	gnl\|CDD\|378489
CP032762.1\|AYJ51444.1\|499671_500571_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
CP032762.1\|AYJ47386.1\|500622_501477_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377550
CP032762.1\|AYJ47384.1\|497952_498828_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
CP032762.1\|AYJ51443.1\|493167_493566_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP032762.1\|AYJ47376.1\|487895_488516_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ51440.1\|488613_488817_-\|DUF3072-domain-containing-protein	unknown	unknown	gnl\|CDD\|371445
CP032762.1\|AYJ47377.1\|488940_489288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377566
CP032762.1\|AYJ51445.1\|504476_506633_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370572
CP032762.1\|AYJ47382.1\|495968_497171_-\|cysteine-desulfurase-like-protein	unknown	unknown	gnl\|CDD\|273906
CP032762.1\|AYJ51442.1\|492214_492826_-\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|223735
CP032762.1\|AYJ47388.1\|503539_504328_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133031
CP032762.1\|AYJ47385.1\|498839_499679_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
CP032762.1\|AYJ47387.1\|501547_503440_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ47375.1\|486717_487758_-\|esterase-family-protein	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	3.67877e-51
CP032762.1\|AYJ47378.1\|489433_490273_+\|pseudouridylate-synthase	gnl\|CDD\|211332	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA.	7.04034e-124
CP032762.1\|AYJ51441.1\|490314_490908_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.12993e-10
CP032762.1\|AYJ47381.1\|494956_495928_+\|NAD(P)H-quinone-oxidoreductase	gnl\|CDD\|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	2.52987e-170
CP032762.1\|AYJ47380.1\|493784_494819_+\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
CP032762.1\|AYJ47379.1\|490979_492134_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.27557e-62
CP032762.1\|AYJ47383.1\|497338_497920_+\|bacterial-proteasome-activator-family-protein	gnl\|CDD\|378489	pfam10759, DUF2587, Protein of unknown function (DUF2587). This is a bacterial family of proteins with no known function.	3.51872e-91
CP032762.1\|AYJ51444.1\|499671_500571_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	2.52555e-53
CP032762.1\|AYJ47386.1\|500622_501477_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377550	pfam05711, TylF, Macrocin-O-methyltransferase (TylF). This family consists of bacterial macrocin O-methyltransferase (TylF) proteins. TylF is responsible for the methylation of macrocin to produce tylosin. Tylosin is a macrolide antibiotic used in veterinary medicine to treat infections caused by Gram-positive bacteria and as an animal growth promoter in the swine industry. It is produced by several Streptomyces species. As with other macrolides, the antibiotic activity of tylosin is due to the inhibition of protein biosynthesis by a mechanism that involves the binding of tylosin to the ribosome, preventing the formation of the mRNA-aminoacyl-tRNA-ribosome complex. The structure of one representative sequence from this family, NovP, shows it to be an S-adenosyl-l-methionine-dependent O-methyltransferase that catalyzes the penultimate step in the biosynthesis of the aminocoumarin antibiotic novobiocin. Specifically, it methylates at 4-OH of the noviose moiety, and the resultant methoxy group is important for the potency of the mature antibiotic. It is likely that the key structural features of NovP are common to the rest of the family and include: a helical 'lid' region that gates access to the co-substrate binding pocket and an active centre that contains a 3-Asp putative metal binding site. A further conserved Asp probably acts as the general base that initiates the reaction by de-protonating the 4-OH group of the noviose unit.	3.22741e-11
CP032762.1\|AYJ47384.1\|497952_498828_+\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.85073e-64
CP032762.1\|AYJ51443.1\|493167_493566_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.60083e-15
CP032762.1\|AYJ51440.1\|488613_488817_-\|DUF3072-domain-containing-protein	gnl\|CDD\|371445	pfam11272, DUF3072, Protein of unknown function (DUF3072). This bacterial family of proteins has no known function.	3.65622e-24
CP032762.1\|AYJ47377.1\|488940_489288_+\|hypothetical-protein	gnl\|CDD\|377566	pfam05901, Excalibur, Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognized and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	1.54541e-15
CP032762.1\|AYJ51445.1\|504476_506633_+\|hypothetical-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	7.50924e-06
CP032762.1\|AYJ47382.1\|495968_497171_-\|cysteine-desulfurase-like-protein	gnl\|CDD\|273906	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity].	4.75833e-122
CP032762.1\|AYJ51442.1\|492214_492826_-\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|223735	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only].	1.18325e-37
CP032762.1\|AYJ47388.1\|503539_504328_-\|glycosyltransferase	gnl\|CDD\|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	1.14331e-33
CP032762.1\|AYJ47385.1\|498839_499679_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	5.09986e-118
CP032762.1\|AYJ47387.1\|501547_503440_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	1.3785e-25

>CP032762.1|AYJ47380.1|493784_494819_+|L-glyceraldehyde-3-phosphate-reductase
MREPHIDPPYVAAGDRYESMVYRRVGTSGLQLPAISLGLWHNFGDDVPLATQREVLRRAFDLGITHFDLANNYGPPYGSAEKNFGRILREDFAGYRDELIISSKAGWDMWPGPYGFGGTRKYLLSSLDQSLDRMGLNYVDIFYSHRPDHDTPLEETAGALISAVQQGKALHVGISSYTPGNTAKMADLLKAAGVPLLIHQPSYSMVNRWIEEGLLDTLEKVGAGAIAFSPLAQGMLTDKYLDGIPDGSRATQGKSLNPDWFTDEHVGHLRALNNIASARGQSLAQLALSWALRDPRVTSVLIGASSVRQLENNIGALQNLEFSADELAQIDEHAGDFGINLWDV
>CP032762.1|AYJ51443.1|493167_493566_-|MarR-family-transcriptional-regulator
MMGVLNKDLQDAHNLTMAEYRILVMLSESSDGSLRMSDLADGVLSSRSRLTHQIRRMESDGMVERNTCVDDGRGVLAVITTEGKRRLEEAAPTHVSSVRAHLVDLLTERELSTLGDIFEKVDAAMGSTIDKG
>CP032762.1|AYJ51442.1|492214_492826_-|gamma-carbonic-anhydrase-family-protein
MLYEHRGASPSVSENAWVAPTAVLIGDVIVGAGSRVLHGAVLTAEDGQVSIGKDVVVMENAVIKGRAGHSVTIGDSVLIGPHAHVNGTSVGRESFIATGASTFPGSVVEAGCELRINAVLQVNSRLAAGSVVPISWVAVGDPAQLFSPDRHDDIWAIQKTLNFTGTVYGTATGVGMDGIMEKQSRFYGTHVADVEIPDGPTAS
>CP032762.1|AYJ47379.1|490979_492134_+|MFS-transporter
MPKVVHVLAAGIFAMVTSEFTVSGLMPQLAHSLGTGVEQIGYLVSVFALSMAIGGPLLASALLRFSHRRALLALFAVFFVGNIVAALTPSYSILLLARIVTGAASGAFFGIAVTAAGNAVSPELRGRATAAVLQGLALGTTLGLPMATWTGGHFGWRAAFVAIGALTLAAAGATAATMPDLAPTADAPNLRNEALALRSPHLWLVLATSTLIIGATFAGFSYFTPILNTETGIDLGVVPLLLVAYGVTTVAGNAVVGRLAISHTMIVLVAGTAMAAMFLALFASGAQSAWIAVPAMLGIGFVGVTMNPAMVTRVQRVGGTGALVNTVHTSMITLGIVIGSALGGIGTAAFGLRAPLWIGAAMAAVAVAVMVPALLVQRRTEVPA
>CP032762.1|AYJ51441.1|490314_490908_+|TetR/AcrR-family-transcriptional-regulator
MARPRQFDEDAVLAASAKLFRVNGFADTSTEQLCSASGLGRSSLYNTFVSKDELFVRALEHYTSVTRARQEAMLQASNTTAAHRIRMLIDAVVDEEAHAAHAAGCMTVNTLMTPDHRHRDPRIAETLDRDLRARLDSLVGAIQEGHIDRSIDDSVSAEDVAWLIVTVISGIRVSSQAGASPELLRRVGHDGIRSLFA
>CP032762.1|AYJ47378.1|489433_490273_+|pseudouridylate-synthase
MPEDGSWATIREFLVDTEPRIAPSRIDEMFSSREIVDMHGPLDIDAPYVRGEAVWFHRDLPAETEVPFDIPIVYRDDTLLVVDKPHFLPTIPRGGHILQTALVKLRLELDLPDLVPAHRLDRVTAGLVLFVVDPRARGAYQTLFQDRKVRKVYDAVAGVNPELEFPRTIVSRIIKDKYDFAAREVDGEPNAETLVELVESRNGLGRYRLSPTTGRTHQLRLHMNSLGLPIIGDDLYPHPTNRAVDDFTSPLRLLASELEFDDPISGLARRFTSSRTLEL
>CP032762.1|AYJ47377.1|488940_489288_+|hypothetical-protein
MIRKTLVRAGLGGFVLAAAMATMPAVATADPITDFLCNSGSSQFCPILPPPPPAFVAPAPPPQHQPQAGCARPAPSAFQYKNCTEARDAGAAPVRRGDYGFGPHLDRDNDGVGCE
>CP032762.1|AYJ51440.1|488613_488817_-|DUF3072-domain-containing-protein
MSENEQVNQNPEKDPENWVTGDEPITGPQESYLNTLAQEAGEEVPSDLTKAQASEMIDKLQGETGRG
>CP032762.1|AYJ47376.1|487895_488516_-|hypothetical-protein
MLRKEAWGFVIGSVLFALAAVPGYARWVGVDADNLTYFIGSMFFTGAGYAALRLSGRPAPNQESDKVEIYDWWAAAVQFVGTLCFNVSTGIAMVSGLTSVEADKWIWRPDVFGSAAFLVASALAVVATTETDKLWDPRARDWRSTWTNMVGSIAFAVSAVGAFVHPATGQLANAALANLGTFVGALCFLIAALLMQPLGRVINNRQ
>CP032762.1|AYJ47375.1|486717_487758_-|esterase-family-protein
MHRRVLAALGTSIALSIVGTGVVSAQPLPGTGSSAGADAPPFAQASPSKIARIDHVDMLTDRRAAVFVDSPAMNKIVQVQILLPAAQAVSRPTLYMLDGVSAGKESDYLESTWTQKTDIVDFFSDKNVNVVLPVGGSSSYYTDWNVPDPILGVNMWETFLTSELPPLIDARFSGNGTNAISGVSMGAQAAMDLITRHPDLYTGVAGLSGCYDNSQPNLKDAVRATVAMNGGNATNMWGENADPRWVAHDPSRNAEALRGKDVYVSVGTGLPGPYELGPGGSGLQDAAQGGPLEAAALYCTTLFDTKLRSLDIDATFIYRPYGIHQWPYWQDDLRESWPTLQRALNL
>CP032762.1|AYJ47381.1|494956_495928_+|NAD(P)H-quinone-oxidoreductase
MHAITLTEFGPPEVMQWTEVPDLRPAQGQVIVDVAAAGVNRADLMQRQGFYPPPPGASETLGLECSGIISELGDGVHGWRVGDRVCALLAGGGYAEQVAVPSTQLFPVPRGLDLHAAAALPEVASTVWSNLVMYGGLRSGHTVLLHGGGSGIGTHAIQVAKAMGATVAVTAGSTAKLDFCASLGADILINYKEQDFVEELPDGADLILDNMGAKYLERNVNALAMDGTLITIGMQGGVKGELNFGALLGKRGTIHAAGLRGRPETGPSSKADIVADMTKRLWPMIEEGVVAPIIHAELPITEAAEAHRLLDADAIGKVILRIS
>CP032762.1|AYJ47382.1|495968_497171_-|cysteine-desulfurase-like-protein
MGYDVARVRGSIPSLGDGWIHLDPQNGMQIPDRVSTAVSTAFRGSAPTHTSGHMSSRRSAGLLDAARQAIADLVGGDPAGVVLGPDRATLLAWLAESMSSRLGLGTGLVLSRLDEEANVAPWLRIANRYGAQVRWAEVEIDTCELPSWQFEELITSTTRLVAMTAASPIVGSAPNVRVAADRVHAVGGLIVVDAAGAAPYAHVDIEELGADIVAVQSSAWGGPQVGALVFRDPALLDRIPSMSLNPLAKGTERLEVAGHQYALLAGVVASVDYLANLDDAATGTRRERLQLSIGSLQDYHDRLFDYLLRSLGKLDHVMVLGDAPSRIPTLSFTVADTSAEKVAEHLAQNRIGTVSGIHSGSRLLDALGVNDEGGAVTIGLAPYTTRHEIDQLVKSLAKLA
>CP032762.1|AYJ47383.1|497338_497920_+|bacterial-proteasome-activator-family-protein
MTDSQSNPEAGDHVVVIGPNGQPLALSREEATAAAARAAGSEAAETSETPLSDMVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRTRLKNIHQSSIRELEQGLAPELREELERLALPFGDDTIPSDAELRIAQAQLVGWLEGVFHGIQTALFAQQMAARAQLEQMRQGALPPGVSINPGGAGHTGGSGTGQYL
>CP032762.1|AYJ47384.1|497952_498828_+|ABC-transporter-permease
MSAPAKNPENEAGERVTVPVSDSQTYKRAFGDLTTGFRQRELWLHLGWQDIKQRYRRSVIGPFWITIATAVQATAMGLLYSVLLDVNLTEFLPHVAVGLIIWNFINAAILEGGDVFVANEGLIKQLPSALSVHVYRLVWRQVLLFGHNLIVYVVIIAIFRPSFGWTDLAAIPAFALLVVNAVWVALLFGIVATRYRDIAPILQSMVTLLFFMTPIVWTTQGLINQGGEAAKRARLVEINPLFHYLDIVRAPMIGEPQQLYHWYIVIGCTVVGWALTIVALKKYRARVPYWV
>CP032762.1|AYJ47385.1|498839_499679_+|ABC-transporter-ATP-binding-protein
MSVGITTLDACVDFPIFDAKTRSLKKAFLGKAGGAIDRNSSDVVVVEALKNITMNLKEGDRIGLVGHNGAGKSTLLRLLSGIYEPTRGTASVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLGQTRKQMLAKMDEIADFTELGDYLDMPLRTYSTGMRVRVAMGVVTSIDPEILLLDEGIGAVDAEFMKKARIRLQALVQRSGILVFASHSNEFLAQLCDRAMWIDHGQIRQEGGIEDVVRAYEGDDAGDHVATILKELERDEAGVEPAERPRDDRNG
>CP032762.1|AYJ51444.1|499671_500571_+|glycosyltransferase-family-2-protein
MAEKIIGVIVTHKRRELLAQSLDVITHQSRPLDHLVVVDNAHEDEVRALVESADIPTTYLGSHHNLGGAGGFALGILYALSLGADWVFLADDDGRPEGPEVLATLYACALKHGLDEVSPVVCDIEDPDRLAFPLRRGVEWRRLRSELIDPRNPDDDLLEGIASLFNGALFKASTIDAVGVPDLRLFVRGDEVEVHRRLQRSGLKFGTCLTAAYVHPNGAEEFKPILGGRMHTQYPDDPTKRYFTYRNRGYLMSQPGMRKLLPQEWIRFGWFFLVTTHNPKGLAEWLRLRKLGRREHFRR
>CP032762.1|AYJ47386.1|500622_501477_+|class-I-SAM-dependent-methyltransferase
MTEPRKLTDRIRHSAREKLQRAIGEVLDKQTAQLAEQTGDQQAKLLEILERQRREIDDLHAFIRGLEMRMRRDIPYASDVEAAAQSAEFAEEVMPKAPTFLRPHATLRFALGEISVAGMALEFGVASGTTLEIIAEESASKPDVTVVAGFDVFSGLPETWRTGFPKGLFEQESLPKVPGAEIVPGMFEESLPEFLKSHKETLAFLHLDADLYSSTVTVLDLVADRLAVGTVIVFDEYFNFPGWRNHEYRAWTEFVGRTGTEFDYLGYTADNEQVVVRIRKAPTL
>CP032762.1|AYJ47387.1|501547_503440_-|glycosyltransferase-family-2-protein
MNKPASVAPVDGSTAAVRSALTEHESSARLVVQRGLFAGPTALVKDDLYATIAKGRAHRERFSVHLEKGATIDTDTYFGRFAASYYQRWTTVTEVRLQFGHESEGKTSVLLRASDSAGNARTLSTVVLDGTGSASLTATLDTFVDGGALWAEFTAVDGSLTVRDLEWTVPAPPVIRPAAIAICTFNRADDCAATVAAIAGDDGMVAGIDAVYVVDQGTDHVSDRALFTEVADRLGDKLVYIRQPNLGGAGGFTRGMYEVSAINEHANLILMDDDILCEPESVLRMNAFANVTVEPTLVGAQMLYLMNPEHLHVSAEEADLTKLKAGRWSAGSKHDSDLTKKKKQQNKRVDAGYNAWWSCLIPAEVVAQIGLPLPMFFQWDDIEYGIRARANGFVTVTLPNAGVWHADFHWKDRDDWAKYFSIRNSLIVAALHSDFDPKPLSKLLAREISQYLVSMQYGLAYTMIRGIEDFLEGPEILEDGGMAVLKSIRSERARFPETIKHPASDMPGIRSSELVTRHAGFEPKKDRIDLVLGKRAAFQWLGRTIPGIASIPAAEAHWWHVSLFDHAVVTDASQSGVRIRKRDKDTAAELTARSAKLLKRFRQQAPEVQAQFRAAVPQLTSRENWARLYS
>CP032762.1|AYJ47388.1|503539_504328_-|glycosyltransferase
MSGTTGTIDLSVVIPAHNSSAVIENTAERLVDRLAGSRAEIIVVENGSTDDTFELCTAIARRWAGNDVSFTVLQSDKGLGNALRVGTEASRGAHVLLTADDLPFGFDDLDGANKLASKNGGTLPTVVIGSKAHRQSSVERGALRGVLTWGFASLRRAVLGMRTGDPQGTVLVDGDLIRDLAADLVEPGFLFTTELVYLVEQRDIRPQEVPVRLSDDHASHGTRISRADVVSMGLGLFRIRKRHQGATRRVAEPTRVQGRRAV
>CP032762.1|AYJ51445.1|504476_506633_+|hypothetical-protein
MAIVLALTVAAVATVPRLVNNRFYYSGDMLESFVPSWHRIGSELRSGQWLAMNPDAWTGGNYAGEAAYGLYNPVNLSNYVLTSYFENLSTAAFVVMVEFLALFGVATYLLSREYGAHRGPALLAGLTLPFGGFTLFYEAGGWPSGMMAVAWVTLFWWSALKLSKGRTNPFVTFLIGALTISMGNPYAALGAVIVLAGLGLELLIGRAFRRLAVLIVTGACAGTAALVTYLPLFLSVDVTTRAGNSGISNDTFLQPQLGALAGSSSPTYLPVIMTFDGPIEILPSIYLAWFVLPLLPFLRWGRVREIFASNAFRRRYGTRLVSLAVVTGVFFLLTFGPSNVGMFRWPIRLIEYLYLGAFVALTLVMSLGLAKDHVRRRLLISAATVAFGFYMAFSSSPALAGRHALAVLVVLLAGTVSFMAWRRWNMAGLVTGLTIGTVAVMILQVVSLGHDVDDDSRQDPSSTTRLSERAEEYPGTVLQLAELEYTEASDVTDGRILFGNEIFASTVDSSINSYTGIGFTEFQNALCMDYRGGVCPELYDSLWQPVTEDIPVPLVDYLRVDTLVVQHALVPAAASAPAPQGWQVSDRDDVRTVLTRTTPSTLPGTVSFVTPGVAVSDGEIGPRSETVDVSGDGGEITFARLAWPGYSATIDGTATQADSGWHGLLRVNVPPGDHELTISFAPPRQRLSIAAFGLAALVALLTGVATAVDRRRKKFSRK

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Crispr_ID: CP032762_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_5

597833-597930

Orphan

Consensus_repeat	Method
GTGACATTCAAGCGATGGGCGGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_5

>merge|CP032762|5|597833-597930|CRISPRCasFinder
GTGACATTCAAGCGATGGGCGGTCCGGCGCCTAATCGCTTGAATGGTCCATTCATACGAGCAGATAGCTAGTAGGTGACATTCAAGCGATGGGCGGCT

>CP032762|5|5|597833-597930|CRISPRCasFinder
GTGACATTCAAGCGATGGGCGGTC	CGGCGCCTAATCGCTTGAATGGTCCATTCATACGAGCAGATAGCTAGTAG
GTGACATTCAAGCGATGGGCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47449.1\|594609_595842_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
CP032762.1\|AYJ47451.1\|596999_597767_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187629
CP032762.1\|AYJ47459.1\|605820_606867_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
CP032762.1\|AYJ47446.1\|590753_591893_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
CP032762.1\|AYJ47453.1\|599679_600330_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ51460.1\|603165_604140_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270265
CP032762.1\|AYJ47458.1\|604183_605821_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
CP032762.1\|AYJ47448.1\|593086_593614_+\|peptidase	unknown	unknown	unknown
CP032762.1\|AYJ47456.1\|601574_602087_+\|copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
CP032762.1\|AYJ47450.1\|595838_596867_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47460.1\|607000_607474_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP032762.1\|AYJ47454.1\|600344_600863_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47447.1\|592133_592757_+\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
CP032762.1\|AYJ51457.1\|588220_589216_-\|DUF4328-domain-containing-protein	unknown	unknown	gnl\|CDD\|379508
CP032762.1\|AYJ51459.1\|593833_594544_+\|TMEM165/GDT1-family-protein	unknown	unknown	gnl\|CDD\|225030
CP032762.1\|AYJ51458.1\|589302_589632_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
CP032762.1\|AYJ47457.1\|602093_603014_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224195
CP032762.1\|AYJ47461.1\|607479_609459_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
CP032762.1\|AYJ47445.1\|589811_590744_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274648
CP032762.1\|AYJ47455.1\|600912_601578_+\|DUF1775-domain-containing-protein	unknown	unknown	gnl\|CDD\|377951

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ47449.1\|594609_595842_+\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.13481e-17
CP032762.1\|AYJ47459.1\|605820_606867_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.55005e-115
CP032762.1\|AYJ47446.1\|590753_591893_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	2.47182e-16
CP032762.1\|AYJ47455.1\|600912_601578_+\|DUF1775-domain-containing-protein	gnl\|CDD\|377951	pfam07987, DUF1775, Domain of unkown function (DUF1775). Domain found in bacteria with undetermined function. Its structure has been determined and is an immunoglobulin-like fold.	6.00675e-44
CP032762.1\|AYJ51460.1\|603165_604140_+\|extracellular-solute-binding-protein	gnl\|CDD\|270265	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.60318e-100
CP032762.1\|AYJ47458.1\|604183_605821_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	7.74826e-94
CP032762.1\|AYJ47451.1\|596999_597767_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187629	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs. HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.0942e-112
CP032762.1\|AYJ47456.1\|601574_602087_+\|copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	1.24663e-26
CP032762.1\|AYJ47461.1\|607479_609459_+\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.16849e-66
CP032762.1\|AYJ47460.1\|607000_607474_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.26123e-17
CP032762.1\|AYJ47447.1\|592133_592757_+\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	2.92793e-93
CP032762.1\|AYJ51457.1\|588220_589216_-\|DUF4328-domain-containing-protein	gnl\|CDD\|379508	pfam14219, DUF4328, Domain of unknown function (DUF4328). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 218 and 342 amino acids in length.	8.55569e-26
CP032762.1\|AYJ51459.1\|593833_594544_+\|TMEM165/GDT1-family-protein	gnl\|CDD\|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	8.79846e-44
CP032762.1\|AYJ51458.1\|589302_589632_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.68114e-24
CP032762.1\|AYJ47457.1\|602093_603014_+\|hypothetical-protein	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	3.74399e-07
CP032762.1\|AYJ47445.1\|589811_590744_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	1.2231e-112

>CP032762.1|AYJ47451.1|596999_597767_+|SDR-family-NAD(P)-dependent-oxidoreductase
MEISGTAALVTGGASGLGAATAKRLADAGVTVFGLDLAQSIERAGDSVPDGVTLIPADVTSEDEVEAALDKITESGVPLRIVVNCAGVGWAGRILSKKGPHDLELFRTVITINLLGTFNVMRLAANRIQSLSTVDDAGQRGVIINTASVAAFEGQIGQIAYTASKGGVHAMTITAARDLAQVGIRVNTIAPGIVDTPMLAGVTEEYRQGLEASVPFPSRLAQPAEYAQLVQMIAEHDYLNGETIRMDGAIRMAPR
>CP032762.1|AYJ47450.1|595838_596867_+|hypothetical-protein
MTQIQDVRDLIGMRSRAAYSVVALYAVTCLVSALATMEGMTSVWPPLGSVAVCVGGALILLASPGDPLPLRPSLALILVGPVSCGLVYSVMPVPASSSLQTWPLGASVAIYTFMCVRGRTLFAWVGLTLTIGSSLFWAVVTGQGIAYGLSFSGINVAPLLMATFFAFTIRPLGRSIFELRIQSTLRISSAAAASAVLEERDAQLERLDEQARPLLGRIVDGPDLNADELLACELLEADLRDSLRARGLAGSQLSQAARSARSRGVQVVMLDDRGEVPLDAPILTELTASAAAQLDSIDSGTVTVRMLPPGRSTLATILHNDSDDTHRFEYGPDGTIVEHSQV
>CP032762.1|AYJ47449.1|594609_595842_+|ATP-binding-protein
MSTSTSTPEKTEPGDEHRSLDRLIRMFARFVSTGYVVYFILLLPELRRTAYLTSTWWVWFCVVAVFGSGVLFGIVSFSKQISLIRFAGSLAASTYLVAALTWWIAWDGALFDVGGNYLSAFPGLATLAAASVWPPVPVFAHLVTVLISVQTSNYVLREPFMNNDLVADILFGIMFCTIFVAATLAALRTARVLDATIVRTQADAASSAAAGARAVERERFDALIHDGVMSSLLSVTRQGRSPSVVRQASLTLRQLDSLRAHSSPDAVDAEEAAAQLRAAATDIDDTITVRFAEAGPPPDNCEPYPADAVRAVGGALAEALRNSIRHAGEAERSIVVTMRPGLLEVGVIDDGVGFDPDSIPPHRLGVAVSIRGRLRQIPGGSSSIDSAPGRGTTVRLTWRATEVPLAAVAP
>CP032762.1|AYJ51459.1|593833_594544_+|TMEM165/GDT1-family-protein
MLSALLLSFAVIFVAELGDKSQLMAMTFALRYKWYIVIGGITVATTVVHLVSVAVGHFLGLSIPTEAISIVGGIAFVVFGLWTLRGDSLTEDEGDKASRVTRSAFIAIASAFFLAELGDKTMLATVTLATDNDWVGVWIGSTVGMVAADALAIVLGAVLGKHLPERVIQFGAAVLFFVFGVSLFFEGVMPGTSAPLIAAAAVVAISAVVWIVVVLRKRRKSSAQVSFERPTVSKDS
>CP032762.1|AYJ47448.1|593086_593614_+|peptidase
MNDRNLIGVSPFHADGLLRGFVISGRWPDTTKEWAQFLALAVQVASMPGLLVTSTVFGAREELPDDPEPGTVGLVLAEGPVLGEMAVTPGRFATHQPPAILMLHPPSETTPSLPECAGAASGCVLLPGLPHLGLDHRAAWVEAESDGTVTSMVSRVGLDPISDPDTAVLAMLLAS
>CP032762.1|AYJ47447.1|592133_592757_+|superoxide-dismutase
MSEYTLPDLDFDYSALEPHISGEINELHHSKHHATYVAGANTALEKLAAARDAEDHGSIFLLEKNLAFHLGGHVNHSIWWKNLSPNGGDKPEGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDSLGKKLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNWADVQARFEAATSKTPGLIFP
>CP032762.1|AYJ47446.1|590753_591893_-|acyltransferase
MGAPGRSSEQDSSTTARAVVAPRVELAGANLLRTIAVLAVLYSHISFYLIDDRGEGWWVIDVVYRVLIEDAGLNNHLSFVGVAIFMLLTGLLVTRSAMRQTRRDFAVSRLSRLVPALWVSIALAIVLVRLGINGMFSGQPGISNSEAALSFVLGGFFLKPEVAVLGVTWTLTVQLMFYLYCVAARDLLRKWPVVVPLLGAALCAAVLVYNLYIPQPWSVPMLSKIAATLPTLFLGQIIYLGWARIIGWRMVVVGVLAQAEVVRLATDVHAYWAGDQYLWTIVVVTGLVLLLGRYDGRIGNLWIVRWTGTRSYAIYLVHTLILYRVYENVVPYTGPTGAVLAFVLVTAGVSEAVYRWVETPAATWLNGRLRTGGGAARRS
>CP032762.1|AYJ47445.1|589811_590744_+|LLM-class-F420-dependent-oxidoreductase
MAIELRVFTEPQQGATYDELLRVAQTAETLGFGAFFRSDHYLSMSGDGLPGPTDAWITLAGIARETSTIRLGTLVTSATFRYPGPLAISVAQVDAMSGGRVDFGLGAGWFEDEHSAYGIPFPSLGERFDKLEESLAVITGLWETPVGETFSYDGKHFPVTDSPALPKPVQSPRPPILIGGGGKKRTPALAAKYADEFNIPFASLETTGIQFDRVRAAATAAGRDPQSLAYSNALVLCAGKSEDEIARRAAKIGREVAELRENGAAGSPAELVDKIGRYGELGASRVYLQMLDLGDLDHLELVASEVIPQL
>CP032762.1|AYJ51458.1|589302_589632_-|rhodanese-like-domain-containing-protein
MSSVPAAELPVELGASIILLDVRENEEWHSGHAPGAVHIPMAEVPSRIGEIDADAQLYVVCKAGGRSLRVVEYLAQIGYEATNVDGGMSAWEAAGRPIVRDDGAEARIV
>CP032762.1|AYJ51457.1|588220_589216_-|DUF4328-domain-containing-protein
MLLSPVSASAPAAGQRNFKWVARRPRTKSPRRVQPSAPRRTATPKYDEIPRWGLIDRPRAVAQDSESRLVRWAGSASGLLLLVAALLGLAAVAEFVRYGVLLYNRTRLVSRTTLAASDALVLFAQVASVVIGVAAAVASVCWLVDRRRLMFERAGLRDPRSARSIFVGSLVPFLTLALPGVFLTELVDVRGRADRDRLRILVRVWWTAWVANWAFVLAASLWRLRDSLQAQADGVLLSAVVALIAAAVALLTIHLMRRVDGLGWRGGRRASPTRWVVAIPGSTSGPALVPRETKAGETGEPEAGKAEVREDGMAAIEAPESEDQPLKVAAS
>CP032762.1|AYJ47453.1|599679_600330_+|hypothetical-protein
MGLFRKRKGRATRKAEAKALKHKATLEAKLGAKNERKQLKSIAKAQNKLSSVEAKSQKNVEKAQVAALRAQQKAALQGSFNAASVRKYISIARVLIPVLTPIVYRGAAVVRGKLDERKAGRLGVNPAELGEYSGYGAKLSARIAASEKSLAQVASAKSDGETGKFADAISQRLTDLGTAVRTSEQMPPARRKAAHNAISAELDGIEADLLARLGVR
>CP032762.1|AYJ47454.1|600344_600863_+|hypothetical-protein
MTPPAASIRGGAVGVLTVALAVAAHGMADGGYPSGSAAVLLLIVGLGVGAIVAIPSPRSRVRGAFAGLALGQIASHVALAVGVSHEMAHAHSLLPSPGMLGFHLAASAVTAALLCAAESLYGPLTSIVRAVLDPPLPLPQRVGALIATGDHDGASFHLLSNSISRRGPPLSV
>CP032762.1|AYJ47455.1|600912_601578_+|DUF1775-domain-containing-protein
MNTFLRRASVLAGVTSLALAVGAGAASAHVVVSAPGAEQGGYTVLTFRVPTESDTAATTSVKVELPGLNSARTQPLPGWTSVVDKNAEGLATAVTWTAGPGAEVLPGQFQQFLLSAGPLPEEESVSFPATQTYNDGEIVEWNEEPAADGSEPEKPAPTLELAAATEESDAHGATAATTEASGQSESSESDTTARWIAGVALVLGAIGAALGIGATVRSRRS
>CP032762.1|AYJ47456.1|601574_602087_+|copper-resistance-protein-CopC
MRKFIVAAIAVTALLVGAPTASAHSVVTGSNPADGAEVATGPAQVSISFNEVPQSKFATLNVVGPDGNLWSKGDPRIEGQSVVVDVGELGPAGDYTIAYRVTSADGHPISGTLGFTLTEEGSGTPGAAADSSATEDSEGGGGLPVWPFLVFGVLVFGGVLAFSLRKPKGA
>CP032762.1|AYJ47457.1|602093_603014_+|hypothetical-protein
MFRRWWTVTAVATGIVGVGIAWLLARPDGPDPSALLRVIADCLGATALGLGLLRTGLFPVRSRPPIWRVTAVVAGGWTAVEAALIVMSAVESLGGGIGNLTVSTFGAYLTDITVGQLGLVTVMCTATACVYALWAFRTGTDTSSIPVVALAVVALVARPVTGHMSQQVFGALIVSAHSVAAAVWLGVLAAMALTLRAKGAWASMLPVYSRLAWWSVWILAVTGAVNAAVKLGGLGALVDTGYGRIVLAKTVLLVILVLLARRLRATWLVSVAAHRTKADESTVRAAVHVCILTLAFGLAAALATTA
>CP032762.1|AYJ51460.1|603165_604140_+|extracellular-solute-binding-protein
MTAGLSACSEPAEPEASSSGGDGTLTVYTSEPQAKIDALNAEFTAANPGIEVQVYRAGTGDLNARIASERETGKIGADVLLAADAPTFEGYKDENLLVQYTPTDVEALNADIVDPDGYYVGTRIIPTVIAYNTGAVTEPPTSWQDLADPKYKGQITLPNPDVSGAAAYNTAVWLGEESLGQPWLEGLAANEPVVAESNGPVGQSVAAGTQPIGIVVDYLVRELAEKGSPIALEYPTDGVPYISQPAGIFADGANQEAAKKYVDFLVSKRGQEVAVEQQYLPVRDDVGTPEGAPALADLNLLNPDLAQITASQPEAVKRFNELVG
>CP032762.1|AYJ47458.1|604183_605821_+|iron-ABC-transporter-permease
MYCRSHGVTSLSLTRAALWLVVTAMILVPIAAVVSIGLGGNHVAELLDAGIVDAAINSLVSAGLSALFAVVIAVAMALILDRTDLPGRSVLRLVLLSPLLIPPFVGAIAWTGLLGPSGTINKFWASHFSGPLWNIYGGDGVVFLLTVHSYPLAYLIIAAALRRIPSDLEEAARISGARPMRALTDVTLPLLRTAAVASFTLVAVSNLADFGIPALVGLPDRYVTLSTMIYRFIQSGTVAKPLEVVSAIGIVLLLLAVVAVALDRLLGRRGAAVDGPSTPAQRLALGRNRIPAGAVVWMLALAVTALPILSLASQALLPAPGVPFTWANLTMDSIVGAVTAPGTVVGIRNSIFLAVGAAVICGVVGLALGVVVTRTRSRDNVGLDLVAMLPQAIPGLVIAVGWLIVGRYTGLFDTRWVILCAYVMAFLAIVVQAVRAPLQATPPALEEVARSSGASPMRALYDVSWKLAIPAAVTGGVLVALTAVRELTMSVLLVAPGTQTLGVSIFNLQQAGDYNAAAALSLLVALAGIAGLGLVAGVTDRKKTS
>CP032762.1|AYJ47459.1|605820_606867_+|ABC-transporter-ATP-binding-protein
MSTISLDAVDLEYPGGSVGLAAIDLHIDDGEFLALVGPSGSGKTTLLRTVAGFLEPTSGTVTIGGDVVAGRGASVAPEHRGLGMVFQQHALWPHRTVGKNVAYPLELAGMSRSDRKKRVADVLELVGLPGLESRNPATLSGGQRQRVALARALVRSPRALLLDEALAALDEPLRDRLRLELRSLTRAAELTVVHVTHDRSEALALADRVAVLDGGRIAQIGTPEELVTRPASAFVASFLSDANVISGVIDGGRFHADDHPLELTVDVIENARDGRGSLAVLPADLSLSSGFPHDCGAGVVTSSLFGRETSDVVVLSHGRSFRCSVRGPRPSVGDEVTITVERGLFDPA
>CP032762.1|AYJ47460.1|607000_607474_+|MarR-family-transcriptional-regulator
MAVRTTTAEALVEEVFLFGRALKRAVTTGDEASPLPQALTGVLAILATEGECRQTDLANRLCVSQSALSRQIADLVDLGYIDRTPDPDDKRASRVRVSSEGGEKLKVIWDLRANRLREMLSEWSETEALSALDSIQKLNNTFNEDAQDTAHLKLIAR
>CP032762.1|AYJ47461.1|607479_609459_+|MFS-transporter
MSTTEAPPNIQQADPDAMSHRQILEALTGLLAALFTALLSTTIVSTALPTIIGDLQGSQTAYAWVITTALLANAASTPIWGKLADLFNKKVLVQSAIVIFVIGSLIAGFAHNVPLLLGARVIQGIGMGGLTALVIAIIGTIVSPRDRGRYSGYTGAVMAVSMSGGPILGGVIVDSPLGWRWCFFVCVPLAVVALALLQKTLHIKTERKDNVSIDWLGALLLTAGVSVLLVWVSFAGKADYYAWISRETAYLVGGGLLLLVLTVIVEARHKSPIIPLKIVTERTTGLAIIASIAVGVGLFGATTFLGQYFQTARGYSPTEAGLLSIPLVFGMLVASVGSGQLITKFGKWKPFIVSGSVLLVIGFLLLGTIDHATSLWTVGIFITIVGLGTGMLMQNLVLAVQNTVSVHNIGAASSTVAFFRTFGGAIGVSVLGSLLATRVAEKSAAGLAELGVDSAGSGGGSLDLTSLPAPILAVIRTAYGDATGRIFLIAGFVAIVTLIAVVLIPNRPLRKTIDFAQAPAEGEETIEIPSFGNTREYLAAEVDEDVRSEDTIVGRHEAPAGSAPFEGLSTDARDRLLNLLLPEPKDTLQALDEAEAIRAEVVALQQELDAKMLDFDAVCERLRRLGLSEDQIARVLGDAHVPDPHQHYVNSGLNGHSVN

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Crispr_ID: CP032762_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_6

720436-720537

Orphan

Consensus_repeat	Method
ATCGCTTGAATGGTCCATTCATATGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_6

>merge|CP032762|6|720436-720537|CRISPRCasFinder
ATCGCTTGAATGGTCCATTCATATGATCTGACAGCTGGCACGTCCCATTCAAGCGGGCAAAATGCGGACGACCCATCGCTTGAATGGTCCATTCATACGATC

>CP032762|6|6|720436-720537|CRISPRCasFinder
ATCGCTTGAATGGTCCATTCATATGATC	TGACAGCTGGCACGTCCCATTCAAGCGGGCAAAATGCGGACGACCC
ATCGCTTGAATGGTCCATTCATACGATC

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47543.1\|709431_710886_+\|phage-infection-protein	unknown	unknown	gnl\|CDD\|224428
CP032762.1\|AYJ47549.1\|723211_724672_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
CP032762.1\|AYJ47544.1\|711224_712784_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
CP032762.1\|AYJ47552.1\|729101_731030_+\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916
CP032762.1\|AYJ47545.1\|712780_713692_-\|cutinase-family-protein	unknown	unknown	gnl\|CDD\|366455
CP032762.1\|AYJ51481.1\|721081_722581_+\|DUF2662-domain-containing-protein	unknown	unknown	gnl\|CDD\|378850
CP032762.1\|AYJ51479.1\|706016_706421_+\|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274679
CP032762.1\|AYJ47540.1\|706417_707671_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
CP032762.1\|AYJ47542.1\|708661_709258_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
CP032762.1\|AYJ47551.1\|726125_727613_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
CP032762.1\|AYJ47553.1\|731047_731668_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
CP032762.1\|AYJ51480.1\|710868_711165_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
CP032762.1\|AYJ51482.1\|727620_729105_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP032762.1\|AYJ47554.1\|732063_733005_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224732
CP032762.1\|AYJ47550.1\|724671_726129_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
CP032762.1\|AYJ47546.1\|714009_715461_-\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|237213
CP032762.1\|AYJ47555.1\|733016_733502_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP032762.1\|AYJ47547.1\|715453_720040_-\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
CP032762.1\|AYJ47548.1\|722750_723215_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
CP032762.1\|AYJ47541.1\|707753_708656_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176125

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ47543.1\|709431_710886_+\|phage-infection-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	5.87281e-11
CP032762.1\|AYJ47549.1\|723211_724672_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.02308e-77
CP032762.1\|AYJ47544.1\|711224_712784_+\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	1.50609e-86
CP032762.1\|AYJ47552.1\|729101_731030_+\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.89394e-128
CP032762.1\|AYJ47545.1\|712780_713692_-\|cutinase-family-protein	gnl\|CDD\|366455	pfam01083, Cutinase, Cutinase.	1.51818e-09
CP032762.1\|AYJ51481.1\|721081_722581_+\|DUF2662-domain-containing-protein	gnl\|CDD\|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	1.89764e-48
CP032762.1\|AYJ51479.1\|706016_706421_+\|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	1.58153e-22
CP032762.1\|AYJ47540.1\|706417_707671_-\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.8121e-62
CP032762.1\|AYJ47542.1\|708661_709258_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.74824e-32
CP032762.1\|AYJ47551.1\|726125_727613_+\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.34537e-100
CP032762.1\|AYJ47553.1\|731047_731668_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.2678e-06
CP032762.1\|AYJ51480.1\|710868_711165_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	6.06449e-23
CP032762.1\|AYJ51482.1\|727620_729105_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.31048e-118
CP032762.1\|AYJ47554.1\|732063_733005_+\|glycosyltransferase	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	1.3415e-28
CP032762.1\|AYJ47550.1\|724671_726129_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.09639e-87
CP032762.1\|AYJ47546.1\|714009_715461_-\|glutamate-synthase-subunit-beta	gnl\|CDD\|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
CP032762.1\|AYJ47555.1\|733016_733502_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.87088e-13
CP032762.1\|AYJ47547.1\|715453_720040_-\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
CP032762.1\|AYJ47548.1\|722750_723215_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	7.49017e-24
CP032762.1\|AYJ47541.1\|707753_708656_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.54662e-72

>CP032762.1|AYJ47547.1|715453_720040_-|glutamate-synthase-large-subunit
MKHTPGPQGLYDPRNEHDSCGVAFVVDMHGRRSRDIVEKAITALVNLEHRGAAGSEPNTGDGAGILIQVPDAFFRAVTDFDLPPAGSYATGIAFLPQGRSDAARACEGVERIVEAEGMKVLGWREVPTDDSSLGALARDAMPTFRQLFFAAEDLSVTDLELERRAFVIRKRVEHELGEEGAGKDGPGRETVYFPSLSSQTFVYKGMLTTPQLKGFYNDLQDERVESALGLVHSRFSTNTFPSWPLAHPFRRVAHNGEINTATGNENWMRAREALISSDVFGSDALEKIFPVVTHGASDTARFDEVLELLHLGGRSLPHAVLMMIPEAWERHESMDPARRAFYKYHSSLMEPWDGPASVCFTDGTLIGAVLDRNGLRPSRLWVTDDGLVVMASEVGVLDIDPSKVVRKVRLQPGRMFLVDTAQGRIVSDDEIKDELAAEHPYQQWLDEGLTSIDDLPDRPHVHMPHDRVLIRQQIFGYTTEELNVLVSPMAKSGAEAIGSMGTDTPIAILSTRPRMLFDYFSQLFAQVTNPPLDAIREEIVTSIGGTIGPEGDLLNPGPDACKQIVLPQPILHNDDLSKLVHINDDGTQEGLRSVVVRGLYPVAEGGEGLRKSLEAIRAQVSAAISGGARIIVLSDRESSEKLAPIPSLLLTSAVHHHLVREKTRTKVGLIVEAGDAREVHHMALLIGFGAAAVNPYMAFESIEDMIERGALTGIEFDKAVSNYIKAAGKGVLKVMSKMGISTLASYTGAQLFQVIGLSQELVDEYFTGLNSHLGGIDLEQVAQDVATRHGVAYLENRQERAHRELETGGEYQWRREGEYHLFNPDTVFKLQHSTRTGQYDIFKEYTKMVDDQSERLASLRGLFRFKTEEREPISIDEVEPASEIVKRFSTGAMSYGSISAEAHETLAIAMNRLGGRSNSGEGGESVDRFEPDENGDWRRSAIKQVASGRFGVTSHYLTNCTDIQIKMAQGAKPGEGGQLPAHKVYPWVAEVRHSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPQARIHVKLVSEVGVGTVAAGVSKAHADVVLISGHDGGTGATPLTSVKHAGGPWELGLAETQQTLLLNGLRDRIVVQVDGQLKTGRDVMVAALLGGEEFGFATAPLVVSGCIMMRVCHLDTCPVGVATQNPLLRKRFAGKPEFVENFFNFIAEEVRELMAELGFRTLNEAVGQVALLDTTAAKEAWKASKLDLSPILDEVESAFMNQDLYNTGVQDHGLDKALDQQLIAQSRNALDKGEKVKFESKITNVNRTVGTMLGHELTKAYGGVGLPDNTIDITFTGSAGNSFGAFVPAGMTLRLHGDANDFVGKGLSGGRIIVRPSLNAPAGFVAEDNIIGGNVFLFGATQGEALIRGVVGERFAVRNSGAVAVVEGVGDHGCEYMTGGKVVIIGETGRNFGAGMSGGVAFIFDPNKTFEANLNTELVDIESIEGDEFTWLKEIVTRHHDETGSDVAERILSDWSQQVNHFVKVMPRDYKKVLLAISEAEKNGADVDEAIMEAARG
>CP032762.1|AYJ47546.1|714009_715461_-|glutamate-synthase-subunit-beta
MGDPQGFLKNTVRELPKRRPVDLRLMDWKEVYEDFSKDTLRTQASRCMDCGIPFCHNGCPLGNLIPEWNDLVFKDRWRESIDRLHATNNFPEFTGRLCPAPCEASCVLGINQDPVTIKQVEVEIIDKAFEEGWVAPVYPTYLTGKTVAVVGSGPAGLAAAQQLTRAGHTVTVFERADRIGGLLRYGIPEFKMEKRHIDRRLAQMEAEGTVFRTGVNVGVDISADELRAQFDAVVLSGGATAWRDLPIEGRENEGIYQAMEFLPHANRVQQGDFAEPPVTAKGKKVVIIGGGDTGADCLGTSHRQGAESVHQFEIMARPPEERATSTPWPLYPLMYRVASAHEEGGERVFSVNTERFLGEDGKVTGLEAHEVEFKAGKFEKVEGSEFTLEADLVLLAMGFVGPEKPGLLTDLGVDLNERGNVVRSNEWVTNVPGVFVAGDMGRGQSLIVWAIAEGRSCAAAVDTFLQGATALPAPIVPTQAPQR
>CP032762.1|AYJ47545.1|712780_713692_-|cutinase-family-protein
MRVKKLVATVGSAMAVIAGVGVLPTATASADPGSCPSLYVVAVPGTWETSSGAAPKPGMLTAVTDRIASSSIRTDYVSYPATAFPWEGGVYGESRAVATANAGGMIKAMADQCGTTKFGIIGYSQGADAAGDLAASIGTGLGVVPADRVVAVGLISDPKRSDVDALVGPEVVGTGVGGPRVGGFGYVSPVVRTFCAVGDLYCSTPKDDYVARLAGFLAVSSDPSPSVAAQAQKDAEVLLGDIAAAGGLPVLQGQLSDQANEQRRREIEAFYRSGIHQEYGSYAVDSNGTSATTWLANYLRDSI
>CP032762.1|AYJ47544.1|711224_712784_+|MFS-transporter
MGASTPKETRQANKGATVHEKATRKDWLGLSVLVIPILLVSMDISVLYLALPAVTADLQPSSNQTLWILDLYGFFLAGLLITMGSVGDRIGRRRLLMIGAMVFGAASVLAAFSTSPEMLLVARALLGVGGATIAPSTLSLIRNMFHDPGQRKEAIGVWTAGFAGGGAIGPVIGGFLLEHFWWGSVFLVNIPVMVLLLVSAPLLVPEFKDPNPGKFDPISVGLSIAAMLGIVYAIKHGAQDGLDATTVSTAVGGLILATLFVLRQRRARDPLIDITLFAERAFSAAVLVQFLVIFALTGFSLFASQYLQLLVGLGPLAAGLWLLIPAAAAALGAVLSPTLSKYVPTGAIIAGGLLLIAFGSLTMHFVGANSGIPLLITGMSLITLGVGAASTLNSDIVLTAAAPEKAGAASALSETGAELGGAVGIAILGTIGTTVYRNGIENSLPPETPPEIAGPAAETVGGGMAVADYLPAPLADALRELAASSFIDGLNLAGAWSAGLMAVSTVVVFLLLRGKATSS
>CP032762.1|AYJ51480.1|710868_711165_-|antibiotic-biosynthesis-monooxygenase
MLSDLKVVATITAKPDSVDIVRAGLAELAAESLHEDGNVSYELFESGSEPATFVTIEVWRSEDDLNAHMRTPHLQKALSEFGEHLAAPPAIHPLRVVR
>CP032762.1|AYJ47543.1|709431_710886_+|phage-infection-protein
MGKLRFLRRPSAALVALAFPLVAAGAFALGAGYDLSPDSEQTLASESATQAGAEEGASGDPLAASRRSLQQANLPISFLSGGVSQLTDGGKQLNDGVVQLADGITQAHDGTIQLADGFVQYQDGIGQLGDGASQISGGVDQLVDRLSAFGAQQSEFTAKLEATAVQVDSFPHPGSDAISGQIRSVIDTLNTQGFGPSTLDQLQTLKNGAQQLSGELNNPSGQFLTATGQIGDATVQLRDGLGQLDDGGGQLRAGTDQLVTAVGPVSGIVSGIQTNVQEASASLPKASELNADDSGATVVAVAPTSASTPVAPYLIAALVAVGAIGAVSLVRVLSRDSRLRWVAAAVAILAVGICAALAFAFTAPEAGIGALLGAGLFLVVSAAAYLAAAGAIQRLLGPTVGQAVNVALLLIQVVVCGAAYASSAAIWGHLSAFMPMAYTAAGAREIGYSAMTSTGWLAIALTAVLLVVSGLVMRRSEADLPNHA
>CP032762.1|AYJ47542.1|708661_709258_+|histidine-phosphatase-family-protein
MQLILVRHALPVRSEDSADPPLAELGVDQAARLPGALARFAIARTVASSQLRALQTGTGVAAELGLTLESDERLTEYDRDFGGYIPIEDAREEFADAFARIKAGHLPEQVDEGAFRDRVLGGMAEAVSGVEHTDTVVVFAHGGVINILLQDVLGTPTVLGFPIDYCSITRILYSRNGSRSVASVNETQHVWDLLPRNR
>CP032762.1|AYJ47541.1|707753_708656_+|LysR-family-transcriptional-regulator
MRDEARHLLPLIPTLLAVADTEHITEAADLLDVPQPTVSRQIARASNILGVDVVERRGRGIALTAAGRILVPYLHRVAVDLEAGLDAMSEHDARARGRISISFQNTLGEDIVPALIKKFREEHPKVTFELDQGARARCLDRLDDGAADLAFVALSAEHTDANSFQLYDERLVLVVPAGHRLAGARSVDLTDTGDENYIAMGHGFGMRSICDELWAEAGITPTIAFEGQDIHTLRGLVGAGLGISILPRLRGHGPETVEVRIDDTTARRRIGMVWSPRTPASQVEAFRTLVVRSGRGLVVR
>CP032762.1|AYJ47540.1|706417_707671_-|MFS-transporter
MSFSTDDVLGWEGHPRGSRDYKRLVAALLFAGIATFAQLYSVQGILPLIASSLKITPSQSSLAVGFATVGVAVSVLPWSVIADRIGRVKSMSISVIAATVLGLIVPLSSSLPMLLTLRFFEGAALGGLPAIAIAYLSEEVHRKHTALAAATYVSGTTLGGLLGRIVAGPVAELTNWRIGTLTVSVIAAVAAALFLVLAPKPRRFLGTSADEPPLGTRLRANLRDPGMLALYAQGFLLMGGFVAIYNFLGFRLEDSPFGLPQSLISLIFVAYLSGTVSSRVAGQLAVKHGRGPVLAGSTAVMIAGVGLTISGNLVVILGGLVVLTIGFFAAHAIASGWTGHRATVGRAQATSLYNLFYYGGSSLIGWLGGVIYQQFGWTVMALFVAVLAAAAMVVMRFAPVSAHAVTSERSQAASVAP
>CP032762.1|AYJ51479.1|706016_706421_+|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase
MPKPPLPEDAIEILKKPNPAVMAVVRADGTPITAPTWYLWEDGKIVLNFQADRKRLEHIRANPKVSISVLDEASWYTHVTVHGSITLTDDPDLVDIDRISTFYTGVPYPVRDQARVTGHLEIDAYVGWGKVKTD
>CP032762.1|AYJ51481.1|721081_722581_+|DUF2662-domain-containing-protein
MGIVQRFERKLQGAVGDVFARVFGGGVVPQEVEAALQQEAADRVRPLEGGHQLAPNSYVITINTSDHDELAADRDLTVKAFSRHLGDYIRDQGWQTYGDVVVRFEPSPTLHTGQFRASGSVDPDVGRSPTAAGNAPSKNQASAFAGASGPTVGAVPGPRPSRPSATPMSTSGAGHMTQNPGYDPQRDPADGSRPDPRARNGYPSQDPRYSQQNGHDRNAYGQDPGYRNGAPQGGGYGAPAPAAEGQYDPQAYSQGSDERGYEEQGYGDQAYVDPANGQPAYVHPSPGQQGYDPQAYGQPAYGQQGYDDQAYGQQAYSNPANDQGYDQGGQAYSDPAYGQQGYDQQPPSQQGYGQQAYAEPAGYGQPAYDYPAQQNGYQQAQYPTAGYQQAPAYGYDEPAYNDSQALTATLQLEDGSGRYFQLRDGQNIIGRGQDAQFRLPDTGVSRRHVEIRWDGRVAMLSDLGSTNGTTVNGSPVQDWQLADGDVVRAGHSEILVRIV
>CP032762.1|AYJ47548.1|722750_723215_+|FHA-domain-containing-protein
MQGLILQLTRAGFLLLLWFFVWAVLRTLRSDIYAASGMRVPARYSRGSKVLPSFNKQKVAKNLVVTQGGLAGTRISLGTQPVLIGRADDSTLVLTDDYASTRHARISPRGGDWYVEDLGSTNGTYLDRAKVTTAVRVPLGTPVRVGKTVIELRP
>CP032762.1|AYJ47549.1|723211_724672_+|serine/threonine-protein-phosphatase
MTLVLRYAARSDRGLVRSNNEDSVYAGARLLALADGMGGHAAGEVASQLMIAALAHLDDDEPGDDLLGKLEAATREGNASIADQVEEEPELDGMGTTLTAILFAGRKIGLVHIGDSRAYMLREHALTQITRDDTFVQSLVDEGRITAEQAHTHPQRSLIMRALTGNEIEPTLTVREARAGDRYLLCSDGLSDVVSDETIENTLNEGDCASSADRLIELALRSGGPDNVTVVVADVVDIDYGQSSPILGGAASTEDEEDSPPPNTAAGRAAAMRPPRSTPKRVTTAPPVPEKKSHKLRWSLLAVGLIALLVGGAFVANAAIRNNYYVGEDSSRVAVMRGVPGSVLGYSLQSVHSIGCLADDGALTLTAPDTAPAGCDQFEVDDLAPAAREQVRAGLPSGTLDDANGQMNRLASGDLLPPCTVAEATTTTSAPPQPTTPAPAPTVAAPPADPAAPPADPAAPPVEAAPTTTPAPTVTQLPGQNCRAGT
>CP032762.1|AYJ47550.1|724671_726129_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSSNPSVGASFPSPPGGFAPAPVQSNRRNVELLLLGIAVVITTLSLVLVEASQEQAVTWDLAKYGLAYLALVTVAHLAVRRFAPYADPLLLPIVALLNGLGLVLIHRLDLADQQAAAYLGQEIPSPDATQQVLWTTLAIAGFIALLVLLRDYRTLARYSYTVGLCGLVLLAIPAILPSAFSEVNGSKIWIRLPGFSIQPGEFAKILLLIFFASLLVAKRELFTTAGKHFLGMDFPRARDLGPILLVWIVSVGVLVFEKDLGSSLLIFGTVLVMIYIATERVGWLIIGFGLLLVGFLFAYQVFGHVKIRTDTWLHPFDDYNDTGYQIVQSMFSFATGGLAGTGLGSGRPSQVPFAKTDFIIAAIGEELGLIGLAAVLLLYLVFIIRGLRTALAVRDSFGKLLAAGLSFTVAIQLFVVVGGVSKLIPLTGLTTPYLSYGGSSLLANYLLVALLIKISDAAREPATPKKKPTPAAPIAEAKTEMVKRP
>CP032762.1|AYJ47551.1|726125_727613_+|penicillin-binding-protein-2
MNTPLRRVSIAVMVMVVALLANVTYLQVIKADDLRSDPRNSRVLLDEYSRQRGQISAGGQVLAASVSTDDRYKYLRTYPPNQLAPNSPLANAPVTGFYSMLYSSTGLERTEDEVLNGSDDRLFGRRLFDLISGRDPRGGNVVTTIDPVVQQVAYDQLFSRGYTGSVVAIEPSTGNILAMASSPSYDPNLLASHDGAQTSDAWDALNADPAKPLLNRAISATYPPGSTFKVLVTAAALENGATPDDQLTAAPTITLPDTETSLENYNGSTCGGGATASLREAFARSCNTAFVELGIKTGADALRDTASAFGIGDETTSLPLPVADSTIGSIPDDAALGQSSIGQRDVALTPLQDAVIAATVANSGVRMAPHMVSQLQSPDLSNLSTTTPDSKGQAISPETAATLTSLMIGSENNTGGDGKIAGVQIASKTGTAEHGTDPRNTPPHAWYIGFAPAENPKIAIAVIVEDGGDRALAATGGSVAAPVGRAVIAAGLQGR
>CP032762.1|AYJ51482.1|727620_729105_+|serine/threonine-protein-kinase
MPLKNGAVIAQRYRLLRLIATGGMGQVWEAMDNRLDRKVAVKVLKAEFSEDPEFLQRFRFEARTTAQLNHPGIAGVYDYGETRDEAGESLAYLVMELVNGEPLNAVLGRIGRLPLGHALDMLEQTGRSLQIAHTAGVVHRDVKPGNILITPAGQVKITDFGIAKAVDASPVTRTGMVMGTAQYIAPEQALGEEATSASDVYSLGVVGYEALSGTRPFVGDGALTVAMKHVREMPAPLPADLPAGVRELIEITMAKDPAARYSNGGEFADAVAAVRAGRRPPAPGSGRGPGTGRVMMPGVVAAPSSTQMMPTSQNRYTGPATGTAQPAAPAPTGMSSAQKALAWGGGGLLLLAIVIGGFVLLNREGETPAPFNPVTTTQRPTTTTTTTTTTTTEPTTTTEPTTTTTQPTTTTTTPPATTTTPPTTTPQQTTTTSNGGFTFTLPPIPGIGGNGGDEEEPQASGNPLGENPVAAGNGRSSSVLPGTDSSGSDRQGQR
>CP032762.1|AYJ47552.1|729101_731030_+|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MTTPRNLSSRYELGEILGFGGMSEVHLARDNRLDRDVAIKVLRADLARDPTFYLRFRREAQNAAALNHPAIVAVYDTGEAETEAGPLPFIVMEYVEGSTLRDIVRGEGPMAPRRAMEVIADVCAALDFSHRNGIVHRDVKPANVMINNAGAVKVMDFGIARAIADSSSPMTQTAAVIGTAQYLSPEQARGEQVDARSDVYSLGCVLFEILTGEPPFKGDSPVAVAYQHVREDPELPSRVNGDVPRELDSIILKAMAKNPANRYQSAAEMRTDLVRVLGGQRPSAPTVMNDEDRTTILGSMDARAPLPRQTGTPQPDSTGGRHAGDDEAAPRHRGVRIALLSIAAIVVVGIVGAFLWSLGPGSSPARVAIPDVTGLSSSDAESRLQEADLRVAIQEKPDATVPSGAVINTRPGSGAEVDTKSTVNLEVSTGPEQVQVPQLTGKNQQQAAQALSALGLELDASVARVPSTPENLDKVVEQNPSSGVGITVGSSVKVTLGSGPAQVRVPNVVGQQVEVAQPNVEGAGFKVQIENIDSSQPMGEVVSTAPAGGSNAVEGDTVTLRVSNGDKIPMPDLLGLTPSQALTALQAAGWTGSASSISSTQEGTLDPTMVGRIVNQAEPAGSEITKTQSVNVNVGVLGIPGR
>CP032762.1|AYJ47553.1|731047_731668_-|TetR/AcrR-family-transcriptional-regulator
MADKRSYHSPAREGAALLTRHAVVDAAAELFETQGYGGTTMRSIAKRAGVSVETVNALGPKVQLLRSAFERRFLPSSPDGRMTAGSVPEVDVSDSASVRQVLGPLIRQFERSAGMHRALGAAADIDAAARRLVDDLRDAQRQQIYGLIDRQFGKTSTTEAKLKVADALAYTLSHGAYDHFVRACGWSSVEYEAWAADTVVEHLRTL
>CP032762.1|AYJ47554.1|732063_733005_+|glycosyltransferase
MVETMFFGAIPLVLRPSASRPRVVALGSNPLSLPTRDRPPTGLGWLPAQSWLGRVRNAASNAAVRSVVLRSLQQTAERRVRSRGSELPISFLDWVTLVDDIVQLTVPGFEYPLPERYDQKVHFVGPLSVSSVDSHPLPSWWNDLDTRKPTVLVTQGSAELDLDQLVLPTISALADRDMNVLVAVGDGDIGRNHPLPDNVYIARHLPYDNVFPSLSCFVTNGGYGGVNFALRHGIPVVAAGRSQDKADVVARVRWSGIGIGIARQSVAPALIRKAVDRVCNDSGFVSRAAQLRRQASASPGMAGAVEIIVSGIQ
>CP032762.1|AYJ47555.1|733016_733502_-|GNAT-family-N-acetyltransferase
MDSATVLPVRRADATAAAELLVLQRCCWVEEALVNDTLDIPPLLETLDEVRTWVTQWSVLTVRDGHRLVGAVRGRPIDDTWEIGRLMVAPDLAGQGLGRHLLDRVEQLAPSHTRTFELFTGARSTRNIRLYERAGYRIVEDDLVPDGHIAGAIVLRKSIDR

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Crispr_ID: CP032762_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_7

1087602-1087704

Orphan

Consensus_repeat	Method
CGTATGAAAGGACCATTCAAGCGATGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_7

>merge|CP032762|7|1087602-1087704|CRISPRCasFinder
CGTATGAAAGGACCATTCAAGCGATGGGGGAACGGCTCGGGCACCGCTTGCGTGAACCATTCGAGCTATCTGATCGTATGAATGGACCATTCAAGCGATGGGG

>CP032762|7|7|1087602-1087704|CRISPRCasFinder
CGTATGAAAGGACCATTCAAGCGATGGGG	GAACGGCTCGGGCACCGCTTGCGTGAACCATTCGAGCTATCTGAT
CGTATGAATGGACCATTCAAGCGATGGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ47832.1\|1089536_1090973_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
CP032762.1\|AYJ51534.1\|1082485_1083625_-\|lipase	unknown	unknown	gnl\|CDD\|238881
CP032762.1\|AYJ47833.1\|1090981_1091551_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ47830.1\|1084573_1085230_+\|serine-protease	unknown	unknown	unknown
CP032762.1\|AYJ51535.1\|1085454_1087545_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
CP032762.1\|AYJ47824.1\|1074366_1075620_+\|MSMEG_0569-family-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274942
CP032762.1\|AYJ51536.1\|1091705_1092758_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|236191
CP032762.1\|AYJ47829.1\|1083765_1084506_+\|translation-initiation-factor	unknown	unknown	gnl\|CDD\|237030
CP032762.1\|AYJ47831.1\|1087713_1089420_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
CP032762.1\|AYJ47834.1\|1092758_1093841_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|240135
CP032762.1\|AYJ51533.1\|1079984_1082309_-\|glycerol-3-phosphate-1-O-acyltransferase	unknown	unknown	gnl\|CDD\|179567
CP032762.1\|AYJ47825.1\|1075624_1076479_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143587
CP032762.1\|AYJ47835.1\|1093913_1095773_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|377746
CP032762.1\|AYJ47828.1\|1078542_1079985_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|153251
CP032762.1\|AYJ47837.1\|1097130_1097874_+\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
CP032762.1\|AYJ47839.1\|1099141_1099774_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|283141
CP032762.1\|AYJ47838.1\|1097870_1099145_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
CP032762.1\|AYJ47827.1\|1077536_1078550_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
CP032762.1\|AYJ47836.1\|1096036_1097077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379751
CP032762.1\|AYJ47826.1\|1076475_1077540_+\|MSMEG_0565-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|274943

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ51534.1\|1082485_1083625_-\|lipase	gnl\|CDD\|238881	cd01844, SGNH_hydrolase_like_6, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	3.18525e-55
CP032762.1\|AYJ51536.1\|1091705_1092758_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|236191	PRK08224, ligC, ATP-dependent DNA ligase; Reviewed.	0
CP032762.1\|AYJ47826.1\|1076475_1077540_+\|MSMEG_0565-family-glycosyltransferase	gnl\|CDD\|274943	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family. A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster. [Unknown function, Enzymes of unknown specificity].	3.64494e-145
CP032762.1\|AYJ51535.1\|1085454_1087545_+\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.95848e-62
CP032762.1\|AYJ47824.1\|1074366_1075620_+\|MSMEG_0569-family-flavin-dependent-oxidoreductase	gnl\|CDD\|274942	TIGR04046, predicted_flavoprotein_involved_in_K+_transport, flavin-dependent oxidoreductase, MSMEG_0569 family. Members of this protein family belong to a conserved seven-gene biosynthetic cluster found sparsely in Cyanobacteria, Proteobacteria, and Actinobacteria. Distant homologies to characterized proteins suggest that members are enzymes dependent on a flavinoid cofactor.	0
CP032762.1\|AYJ47832.1\|1089536_1090973_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.32919e-74
CP032762.1\|AYJ47831.1\|1087713_1089420_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
CP032762.1\|AYJ47834.1\|1092758_1093841_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|240135	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.	4.82484e-117
CP032762.1\|AYJ47827.1\|1077536_1078550_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	3.28714e-33
CP032762.1\|AYJ47825.1\|1075624_1076479_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	5.13827e-65
CP032762.1\|AYJ47835.1\|1093913_1095773_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	1.48721e-171
CP032762.1\|AYJ47828.1\|1078542_1079985_-\|HAD-IB-family-hydrolase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	3.62269e-52
CP032762.1\|AYJ47837.1\|1097130_1097874_+\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	7.42678e-15
CP032762.1\|AYJ47839.1\|1099141_1099774_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|283141	pfam05401, NodS, Nodulation protein S (NodS). This family consists of nodulation S (NodS) proteins. The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors.	1.69386e-18
CP032762.1\|AYJ51533.1\|1079984_1082309_-\|glycerol-3-phosphate-1-O-acyltransferase	gnl\|CDD\|179567	PRK03355, PRK03355, glycerol-3-phosphate 1-O-acyltransferase.	0
CP032762.1\|AYJ47829.1\|1083765_1084506_+\|translation-initiation-factor	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.66063e-08
CP032762.1\|AYJ47836.1\|1096036_1097077_+\|hypothetical-protein	gnl\|CDD\|379751	pfam15887, Peptidase_Mx, Putative zinc-binding metallo-peptidase. This family has a highly conserved HHExxH motif with a highly conserved ED pairing downstream. HExxH is indicative of a zinc-binding metallo-peptidase.	7.70314e-146
CP032762.1\|AYJ47838.1\|1097870_1099145_-\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	2.18321e-29

>CP032762.1|AYJ51535.1|1085454_1087545_+|MFS-transporter
MEKPYAKRWAALGVLCLSLLVVVMANTSLLVAAPAMTMDLNLSSSDLQWVIDGYTVPYAALMLLFGVIGDRYSRRGALLLGLLIFTAGSIAGALTDATVGVILARIVMGVAAAIVMPATLSLLVATFPKHERATAVTIWAATSGLAIAMGPLLAGWLLESYWWGSSFLINVPITVFAIAAAIALVPPSRAVDPGRIDWLGGLLSVVAVSTVVYAIIEGMHFGWSVGPTYFAVVGVLSIAAFVGWELRHPNPLLDVRAFRSRVLSGAVLAVLLFFLVTFGAIYYVAQYLQFVLDFGPVSTGVHLLPLAGAVFVGSGITQWLTPKVGMKYTVTAGMVVGTLAVVSMLGIDTTASYVDFVPVLSLLGIGIGLSVSPCTDAIMAEFPDNKLGVAGGLNDTALELGGSLGIAFLGSVLATTYRGGIIDFLAGFPGKGPDGQPTEQALQAVEASGDSVAGAVIVSDILRENPFLKGYADNLEINAVSSFVGAVVHTSLIATVVFAVGAVIVGVLLPAPVKRVLPVAPAAFDPAAAREVAELEHLLEQPSAPKAAVVGLEKAEAVVLAKPVAETSTVRTPVVVETSVSVEAIVAGELVRPSIYQLAAKVFEVQAAAEEEAALENSEHVTIHQLALADRARKRRESAEEELDAALDLAELPVMRRAPKPVNRPSQQNFYQLADSAYRRCTEFKERSSPVWAMPL
>CP032762.1|AYJ47830.1|1084573_1085230_+|serine-protease
MLKKFMLVAVAAAAVAASFGVGTASAAAPAVLGGGSGIIVDNAAECTLTTIGNDREGRLVGLTAGHCGGAGATIVPEYDPSAGVVGRIAFSNPEYDYAVIEFDRAKVVPVNRVGNVTITQVGPPASFPNIVCKEGRTTGNTCGVAYGDVLQSQETWSQLCVVEGDSGSPVVVGTTLVGMVNAYLGIACFGPQVGTNMDAILRHIDAGNAVGAGFAPIP
>CP032762.1|AYJ47829.1|1083765_1084506_+|translation-initiation-factor
MPPRRRKTANESLTPENLATLAGALAEGRRATVYLIEPTPSLGLPEGTSAKVVSIDGSTVTISPKGVDDELPFEADELRITRNAPGSAAKPAAKSAATPAAAKPQIAEWTEPAKPSPAKPAPTKPAPTKSAPASIAPAKPAPAKAASAPARKGKKGPDSVSVTIHAGADNDWSVTVTHGARRPGKAQSVSPESVSRAVRELGDESARDAVEAVISYAREEAASRVAELSRQLEEARSMLAALESDV
>CP032762.1|AYJ51534.1|1082485_1083625_-|lipase
MNTTTITPDLLRGALDHEYTERGLVVHRLPAWARSQVPDAQLASAETQPAGVRLAFRTTARVVELDAVRTKRNFVGLPPRPDGFYDLFSNGVFTHSSPSNGGDVVTIDMATGGVEVSAGTVGTMKFALDPGVKDVEIWLPHNETVELVSLRSDSPIEPSPTPSRPRWLHYGSSISQGSNAATPSATWIGAVASSSRLDVVNLGFGGSAMLDPFVSRVLRDEAADVISLEIGINIVNSDAMRLRAFVPAVHGFLDTVRDGHPDVPIYVISPIYCPIHEDTPGPGAFDPEELAEGRVAFMATGVAGPGKLTLRVIREELDRIVAQRQDLNLVYVDGLDLYGVDDFADAPLPDRLHPDEATHQLIAHRFREVSATSSNSYFD
>CP032762.1|AYJ51533.1|1079984_1082309_-|glycerol-3-phosphate-1-O-acyltransferase
MYHVEANEQTTSDGPQVYLLDAASTLEVQALNQWIDSTTPDGAQRPPSVVLYGESAHQVADLVRAIAKDPLLIPLRVTLTEKKRGGFLRRVFAPRGNSMPTKAWQRWVQGDDPDHSAVLVGEPATLRDLAARFEKAGGTSLSLFIRRQASLALDRAERDVIGSEYKIPRFVVEDMTEQKKFHDGMAELATQVGEDLPEVERRVHTILNEMVATETRRAVEMWGTLGAYFSRAYQVDVDRTQLQKVRELNKKHPLVFLPNHRSYLDPLVLRPALLTEGLPLNHVMGGINVGFWPLGPIAKRSGVVLIQRKFSDEIYKWTLRQYMSFLLSKRFNLEWYIEGGRSRTGKLRPPRFGLLTYLVDALESSDAEDVYLVPTSITYDRLHEVGAMAAESHGAQKQAEGIRMAIGYIRAQGKLRGNVYLTFGEPISVRSILAENEDKRVAVQKIAITVSHAINDSTPVTPAALVTMALLGIEDRALNVHEMWAIISPLADYIKKRGLPTAGGVDISEVDVVRSAVIAQVNAGVVKRFDEGPEPVFYLAQDKHLVAAFFRNNAIHYFVMRAIGELVVLPDQGQTGASTPESIWKSALELRDLLKFEFFFGDKKDFGDRLEAEVALIDPDWRKNLDDPAYAAKKLESQDLHLAHRVLQPILEAYQVVADQLMLQPTGTEFDKPTFVAQCLGAAQARRLRQQLDHSEAISGELFDTALQLADNRGLVDPSGDNLAQRRRDFAREINEWARKARVVRDMAHRMLAEVDPLTVPAGVPSNEPREGDA
>CP032762.1|AYJ47828.1|1078542_1079985_-|HAD-IB-family-hydrolase
MSNGPSIDLAHQLGVIADAPQGPDTAAFFDLDGTLISGFSAKAVFLERLKTLDVTVNELWEISSAVVEMRMRNSPVDNLMGKAVKGLEGRREEDLMEQAYTLFRNEIAPMIYPQARMLVEAHRHAGHRLVIATSATPYQAIPVKEDLQFDELLCTTPVVVDGVLTGELVGNSLWGPRKAQAVADYAEQQGLDLGRCFGYSNGGEDVPFLDEVGHPVALNPDEDLKRYAAKVDWPTLALENPKRGTDITSAIRSTAALGSVLASAGFGLGLGLLTGSRRTGANITSTIAPDIALTIAGIKLDVTGTENAWSARPAVFLFNHQSTADSIIVTSILRRDITAVAKRELERDPRFALLGRIFDVAYIDRGDPAQAREAMKPAIEKLHSGISVAIAPEGTRMPTPRLGRFKKGAFHLAMQAEVPIVPIVIHNAGDVMWKKDFTAHSGTVKVTVGEPISTKDWVPEKIDSYIDDVRSFYDRTLGYA
>CP032762.1|AYJ47827.1|1077536_1078550_-|adenylate/guanylate-cyclase-domain-containing-protein
MPENQISSVVQSEIEKNLLGGTPKYTRGDIVEKSGIEPQRVTQLWIAMGFPVHTDPDAIVYTDADLDALRMITGLTEQGVIRPEMEVAIARTLGQTMSRLTEWQVGVVNSHIHDRIESAGPADLDAIRKDAREVAAQTVPTLEALQSYTWRRHLAATAGRSIADPNDEATSRTLAVGFADMVGYTSLTRRLAIEELTELLEEFESIATNIIARGRGSVIKNVGDEVMFSAQTPEDAAHIALDLQDAFAAKEDMPELRVGIAWGPVLARYGDLYGSVVNMAARLTSSAHPGSILVDTTLTEALAEDSEFYLKSLRSLRVRGFHKLKPHALRRNKRDNH
>CP032762.1|AYJ47826.1|1076475_1077540_+|MSMEG_0565-family-glycosyltransferase
MRIGLLTYSSKPRGGVVHTLHLAEALARAGADVTVWSLGRGGDSAFFRAVDPSVTVAMVPFEARDDESVGDRILRSIATLGEAFSPDDYDIVHAQDCISANAVGRCIRTIHHLDTFTTPALAACHERAVVEPYARICVSAAVAEEVRLGWGVEPTVIPNGVESARFEAAAASANTEWQRKFGSYVLAVGGIEPRKGSLDLLEAFALLNRPELRLVFAGGETLFDYRDYRRRFDSRAEELGIDPVVLGTVDNDELPFLVAQASVLPFFSTKEGFGLAAMEALAAGTPVVARDLPVLREVFGNAVTYASEPEGMAHELAQAIDVVHDGEDGRALARSLTWDEAARSHLDFYRSVGC
>CP032762.1|AYJ47825.1|1075624_1076479_+|carbon-nitrogen-hydrolase-family-protein
MAPIRIGALAAHFGRDIDRAVSKIVTIIDSAARDGIDLLVLPDASLGGYIDSLRNPDVSELPPTLDIDGPEIAAIIAAARDMTVCVGYTELSDGLRYNAAVCITGDGVLGSHRKVHQPLGESLAYAAGNRFDAFDTPVGRMGMLIDYDKTFPESARTLALDGARIISALSAWPASVTDRASSLSNDRQSRLFDLYDAARAAENQVVLVSSNQTGIMGSLRFLGQAKIVGPGGDILAKTRDKGGLAVHDIDVDAEVNRARRVLHHLEERRVDSYPNLLDEKGSQG
>CP032762.1|AYJ47824.1|1074366_1075620_+|MSMEG_0569-family-flavin-dependent-oxidoreductase
MSESHSVIVVGGGQAGLSISWHLTQRGIEHVVLEAATIAHEWKDSRWDNFTLVTPNWQCALPGFAYDGDDPDGFMKRDEVYDFIRRYADSFDAPVREHVSVTSVLQGLDGFDLETTAGPMHADQIVVAVGGYHIPTIPRFAEKLPKEILQVHSSDYRGSHQFPDGDVLVVGTGQSGAQIAEDLHIEGRRVHLVAGTAPRVARFYRGRDCVAWLHDMGVYDVSIEDQPGGVGKRENTNHYVTGRDGGRDIDLRAFAAEGMQLYGRLLGVEDGVLQFAPTLEISLDAADAVAESIKDNIDAYIEREGIDAPTEERYVPVWRPEEETTELDLGSSDITAVVWSVGFRTDYRWLRVGAFDGEGHPTHNRGVTAVSGLYFLGLPWQHTWGSGRFASVARDAEFLAEQIGLEISAAQPEKVVV
>CP032762.1|AYJ47831.1|1087713_1089420_-|dihydroxy-acid-dehydratase
MSTENESPDVKPRSRDVTDGLEKTAARGMLRAVGMGDEDWVKSQIGVASSWNEITPCNLSLERLAKAVKVGVHAAGGFPLEFGTISVSDGISMGHEGMHFSLVSREVIADSVETVVSAERLDGSVLLAGCDKSLPGMLMAAARLNLASVFLYAGSTLPGFATLSDGSEHQVTIIDAFEAVGACSRGLMSREDVDTIERAICPGEGACGGMYTANTMASAAEAMGMSLPGSASPPAPDRRRDQFAHASGEAVVELLRRGITARDIMTKEAFENAIAVVMAFGGSTNAVLHLLAIAHEAEVDLTLDDFVRVGAKVPHLADVKPFGKHVMTDVDAIGGVPVVMKALLDAGLLHGDCLTVTGKTVAENLAHIAPPDPDGKVLRAMNAPIHPTGGITILKGSLAPGGAVVKSAGFDSDVFVGTARVFERERAAMDALEDGTISAGDVVVIRYEGPKGGPGMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHVAPEAVDGGPVAFVRDGDRIRLDVGKGTLDLLVDESELEARKEGWAPLPPRYTRGVLAKYAKLVGSASEGAVLI
>CP032762.1|AYJ47832.1|1089536_1090973_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MSVALKSPRGRWIVAGCVLGSSLAMLDATVVNIALPDIASDLGAGVSGLQWTVSAYTLTLASFILLGGALGDRLGRRKVFVWGTVWFALASVLCGLAPNIEVLVTARLIQGIGAALLTPGSLALISASIRPEDRGAAIGLWSGLGGVASAVGPLLGGWLVDVAGWRSVFLLNIPLAIVVVWTAVKHVPESRDPHAEGRLDIPGAGIVALALGLLTYGFIGALPVLIALGVVTVGVFVIVERRTDNPLVPPSLFSSRVFLAANLVTFAVYAALGGVFFLLILQLQLALDYSPVAAGLATLPITALMLVLSARAGRIGQRIGPRLPLTIGPLVASAGLLLMLRISPGSSYFAHVLPAVVVFGLGLSILVAPLTGAVLAAVSTDRAGTASGVNNAVARTSQLLAVAALPGVAGISGMDYDVPEVFSSGFHTAMLLCAGLLLLGSAIAAVMIPGVPRSDPASVDCLPHCDPSSPAVSPREQV
>CP032762.1|AYJ47833.1|1090981_1091551_-|hypothetical-protein
MACCTLFLASCSSDVSGRAVPAAGENGSSTSSSAPTTTIQAAPSGQEGEDIGGDIDFDVEIGQCVELGGTQYDATIDNADCGSERSNYKVIAKTPTQAECPSDIDQSYYETFADIEQGALCLDIDWVIGGCMDLGSEDPNRIDCSLPQSDSYYITDIIEGTIDVEDCADPATGGFRKSERNFTVCFEEL
>CP032762.1|AYJ51536.1|1091705_1092758_+|ATP-dependent-DNA-ligase
MDLPVAWPIQPMLAKAAKVVPAQPDDGPPTWSYEPKWDGFRSIVFRDGDEVILGSRGGKDLARYFPELVDAVRRELPERVVVDGEIVVPREIEGRTRLDWDALSERIHPADSRVQMLAEKTPSMFVGFDLLAHGTTDLTGTPFGTRRERLLEVLNGDSPGRSCQVTSTTDDAATAQDWFERFEGAGLDGVVAKKLDGLYLPNKREMIKVKHARTADCALIGYRVHKSGNGIGSLLLGLYDGDDLRMIGGASAFTDKRRIEILEELQPLRTGEEPKSAEANRWTSNKDRSWVPLRVERVIEVAYDQMEGERLRHAARFLRWRPDRDPKSCTYEQLEVPVSYDVADVIAGGK
>CP032762.1|AYJ47834.1|1092758_1093841_+|ATP-dependent-DNA-ligase
MAAKTPPAFVEAGDREVRVSSPDRVIYEATDRTPEITKLEVCKFYAAIGEPLLRAIGERPTAMERWPDGFREGMRLALGPQDKEGDGFYQKRLPKGAPDWIETVKIAFPSKRTAEELCPSEVAAAVWAAQMGTLTFHPWPVRRPDVDNPDELRLDLDPQPGTTFADAQRVAEVTRELLEELGLRGYPKTSGNRGIHIYVRITPEYTFEQVRHAAIGLGRELERRDDGVTTKWWKEERGERIFLDYNQNNRDRTIASAWSLRAQPGAPVSTPMSWANLAGVTDPREYNLVTVPDYLADGDPWEAIDSESYSLEPLLHLWDTLPGGELNFPPDYPKMPGEPPRVQPSKKVAEHWDDEGNRIE
>CP032762.1|AYJ47835.1|1093913_1095773_-|Na+/H+-antiporter-NhaA
MTDMTPSISPARRLAQRLTESRGEKNSETLAAGFLLAATLIALLWANSPFGETYQSFWHTEVSITVGNHGIALDLAHWVNDGLMALFFFVVGLEVKREFAMGELTDRSRASIPIVAALAGLAVPAVLFLLLNPSGEAAGAWGVVISTDTAFVLGALAVVGPKKAARLRIFLLTLAVADDVGALAIIAFFYTDELDITALALAFVGLAAIALLRRLQVWRGVGYLVVALATWVAFYESGVHPTLAGVMIALILPVYPPRRSEVERAADLTRAFRQSPNPEYARAARLGLDQAVSVNERLMRLYQPYTAFIIVPIFALANAGVVLSGETLRAAAVSPLTWGIIVGLVLGKLVGITGAAALFAKIKPSALAPGLTLSHIAGGAALSGIGFTISLFIVDLALDDELLADQARVGVLAASVIAAALGWLLFRIDARIHPPRQDTSHRILRAVDPRRDHIRGPVDAPLTIVEYGDFECPFCSKATGSIREVRTHFGDEVRYVFRHLPLDDYHPHARYAAHASEAAAAQGKFWEMSDLLFAHSDALEPDDIDGYAEDLGLDMDRLEEDIRTGDYVVRVEDDELDASSSDVEGTPTFYLGRGDKNLVRHTGPYDAASLIRELEAHRA
>CP032762.1|AYJ47836.1|1096036_1097077_+|hypothetical-protein
MKVGIMRALICRKCGQKLSFENSLCLNCHSALGFHLPSRALLVLPDTAGDGAAEVDIEGTTWKVCGNLTTAKCNWLVDTTEGEELCVSCRLTRTRPADDDLDAMAAYADAETNKRRVVLELTELGLPIVGRDEDTATGLAFDLLSSADTQVMTGHADGLITLDLAEGDDVHREQLRVSMSEPYRTLVGHFRHEIGHYYQMVLVGTGEHRDRFEELFGNPDDDYQAALDRHYNEGAPENWENDYVSSYATMHPAEDWAETFAHYLHIRDTLDTAAAFGMAPAGSTLDSPLPGDVGFDQIIDWWLPLSWALNQINRSMGHQDLYPFVLPATVLDKMRFVHQLIAPSAL
>CP032762.1|AYJ47837.1|1097130_1097874_+|ANTAR-domain-containing-protein
MVYISEQVLGDEMRPAGDTELDLGQRMAAVARELRAQHTDADRTLLAITESAVMNVPSAESASITTVLQGKFVHSAALAGDLASRCDGLQETLREGPCLESAVEQRTIRIDDMDADGRWPRFAAEASKVGVKSMICFQLYVEGHNYGALNLHSTRANAFDEDAESIGSLFAAHAAIAFSSAREEQQIRAALTTRDVIGQAKGMLMERYKLGAQAAFALLSKLSQDTNIRLADLAHQVVADAEKELTD
>CP032762.1|AYJ47838.1|1097870_1099145_-|EAL-domain-containing-protein
MSGETMTGEPTTREYDGGALETLLGPNSLHTDFSPIVDLLTREVVGYEAIVSGPADSAFANPSALASAARAMDMTVDLDLFRWSGAVEGAARIESLQNLPLFIAIDPDTLPHLPDRAHVDAGTAVLQIDETALIRRPAQLLRTVADARRLGWAIAVDHVGVRPESLALLPLLEPDVVKLDRSLIAAKPSRFIARVVNAVAAYTERTGAVVMAEGIDTEDGVSIAIALGARVGQGKYFTDQSLAPVDPSARLSPVNFRTSPGRGALPRSSPCQLAAAGRDSKPSTKRLLVEVSKGLESIASQSLQTAVILGSFEKREHFTPHTAHRWEVMATRAALVGALAAGIDSEPAPRVRGADLELGDPVREEWVVVVLSPHFSAVLAAKDMGDTGPDMNRRFSYVLSHDPQLVVDCARSLLLRLPVERTGL
>CP032762.1|AYJ47839.1|1099141_1099774_-|methyltransferase-domain-containing-protein
MSTDRTTLNKDYFDDVYTDNVDPFRLSDNWYEDRKYSLTLAALPNARYRRALEPGCSIGILTERLAGRCDALVSTDIVASALETARARVGSPNVEFREWSLTDPWDEVAGDGLFDLIVLSEVGYYLGRRDLSAALDNAVSHLEPGGTLLAVHWRHLVADYPLTGDQVHSTLGATVGLVRVGGYVDEDVILEVFAASTQRPDSVARIEGLV

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Crispr_ID: CP032762_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_9

1498157-1498241

Orphan

Consensus_repeat	Method
TTACGTCGGGCGGTAACTACGCACTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_9

>merge|CP032762|9|1498157-1498241|CRISPRCasFinder
TTACGTCGGGCGGTAACTACGCACTCACCGAGCAGGTCCACGGCCGTGAGCGGGTAATTACGTCGGGCGGTAACTACGCACTCAC

>CP032762|9|9|1498157-1498241|CRISPRCasFinder
TTACGTCGGGCGGTAACTACGCACTCAC	CGAGCAGGTCCACGGCCGTGAGCGGGTAA
TTACGTCGGGCGGTAACTACGCACTCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ48126.1\|1491309_1491696_+\|YbaB/EbfC-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|376829
CP032762.1\|AYJ48137.1\|1499144_1499411_-\|DUF1049-domain-containing-protein	unknown	unknown	gnl\|CDD\|227703
CP032762.1\|AYJ48129.1\|1493270_1494650_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48136.1\|1498921_1499131_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48142.1\|1502540_1503458_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
CP032762.1\|AYJ48139.1\|1500615_1500999_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|132914
CP032762.1\|AYJ48138.1\|1499501_1499672_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
CP032762.1\|AYJ48127.1\|1491724_1492528_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48125.1\|1490875_1491340_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48141.1\|1501992_1502472_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP032762.1\|AYJ48140.1\|1501277_1501814_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48133.1\|1497752_1498148_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48131.1\|1496485_1497292_-\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
CP032762.1\|AYJ48134.1\|1498259_1498460_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
CP032762.1\|AYJ48128.1\|1492826_1493168_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48132.1\|1497487_1497727_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ51602.1\|1499937_1500399_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
CP032762.1\|AYJ51601.1\|1494673_1495960_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224437
CP032762.1\|AYJ48130.1\|1495994_1496312_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48135.1\|1498461_1498863_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ48126.1\|1491309_1491696_+\|YbaB/EbfC-family-DNA-binding-protein	gnl\|CDD\|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	0.000330831
CP032762.1\|AYJ48137.1\|1499144_1499411_-\|DUF1049-domain-containing-protein	gnl\|CDD\|227703	COG5416, COG5416, Uncharacterized integral membrane protein [Function unknown].	2.84945e-05
CP032762.1\|AYJ48131.1\|1496485_1497292_-\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	1.96447e-18
CP032762.1\|AYJ48134.1\|1498259_1498460_-\|transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	2.33624e-23
CP032762.1\|AYJ48141.1\|1501992_1502472_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.6454e-09
CP032762.1\|AYJ48142.1\|1502540_1503458_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	3.2808e-50
CP032762.1\|AYJ48139.1\|1500615_1500999_-\|anti-sigma-factor-antagonist	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.1875e-09
CP032762.1\|AYJ51602.1\|1499937_1500399_-\|N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.99898e-27
CP032762.1\|AYJ51601.1\|1494673_1495960_+\|hypothetical-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	0.000684851
CP032762.1\|AYJ48138.1\|1499501_1499672_-\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	2.19405e-06

>CP032762.1|AYJ48133.1|1497752_1498148_+|hypothetical-protein
MKKFVTAAVLLILGASGLFNGIALVSDPNGGTLGLSVDMLPAWHTWDYRYAGAFVLVALGIAPLVVAAAVIVDVSGSLLVAGVVGATAIGWALWQYLVLDIWAPQAYLVLGLIGIVLVIGSVDSVARRLRP
>CP032762.1|AYJ48132.1|1497487_1497727_+|hypothetical-protein
MASSFSDAEIVAFAQRWDPYGGPAPSEVFLHFGCPVNVYQDRLQAALDSVVDEDHARRDRMLEYARRPHVVDETLWTLQ
>CP032762.1|AYJ48131.1|1496485_1497292_-|transglutaminase-family-protein
MLKRDVSARLDVDITAPTTLEFQIAIAPHPGTTVTESLSFLLDGNPIQAKEVSGAHGNRIHVFPADAGNLQVAYDATVLGNTTPAPVTDYDMSLYLRPSRYAEADKFYGFAATEFGDYADSEELLERISSWVGARLNYVPGSSDPIDGATDTLLAGAGVCRDYSHLVVAMLRAVNVPARLVAVYAPGCDPMDFHAVAEAFVGGTWRVVDATCLAPRSTLVRIATGRDAADTAFLDNHKGAITLNSSVVTAVVDGELPTDDITELVSLT
>CP032762.1|AYJ48130.1|1495994_1496312_-|hypothetical-protein
MSSPIDDLLHHCRSLGLTADVGTMFRSPALRCEGKVFAFVGHNDTLIVKLPHDRIAELDADGLGHQVTMGERTMREWAEVPAGPAPELWNDLTVEAYRFVSSLVS
>CP032762.1|AYJ51601.1|1494673_1495960_+|hypothetical-protein
MAAAVSVGAAVILVSTAPREAEPGAQPTPTSPGAVWTLAASDVLGNEFATFEDPVGARFGDVKGGVVDAGDVLVAKVGLTNQETREFEQSELVGFDAATGDVRWTSSADGVESCSTSLLDGLLLCRSGSDIVTVDTTDGEIARHPTEWNIYSVSTDGTDIYVMEGEVDGTSTRIHRGTLDAPDSRWSLTMEDAYFGMDTYGDMIEFVGGVGVTKFLSSTTVFDPETGEILSTFGLPDCVRAQSVRGDQVHLVLGRHCSDLFEYRTDVVDAEGKVLATVDAEAWQQTLIDAPTDPQDPIVLNGRAFDPVSGRELWSGDRYGISSDIAIVGDVVLAGDAPALDLHTGEPAWPEDTEPLLDTPDVLYDGEVWVRGWMSDIVSIDPATGARRASVSIEGLLGNTRGRSEQVALLGVRDGVVVVNETRLNLVR
>CP032762.1|AYJ48129.1|1493270_1494650_+|hypothetical-protein
MRELSPRRAGVWADALTIVSIVAIGVCVAAIVERVSPADAPTAAVAAESTPQSEPEPSPEPEPVDTTYRTPEVAFPTTIPGCDVVEPPSVESATLSASFTSEDVYDNPQYPWYSGPRSVMMTRAVADALPDGVDVLFGSHRESLTFQPIPMASTEPGEPLPQGFASASGEVGRGDSLGQLAVSVSQGDGVVPPCVAGSVTERSRAADGTVMDANESWYEFGPDRTTFRSVVAYAPDGSQISATSSDATGFQSTNTGERDTVLTVDELKAIAALPELRVTAAVPADTPEPVGGCDNSFGYFSGDQTIDAASAAALNSALDGVDVGQRFEPKLGTLMLADFETGVVCTRADVLGTGADVSISIRGGQALPTVPSVYDPAYPGRPLETEMLDGGAVMQVEESKYSYSPAAEGGPTGGMRRSVIVTYPSGTQVEVRSHAENPDEPLGVDTLRTIAMTDGLDIL
>CP032762.1|AYJ48128.1|1492826_1493168_-|hypothetical-protein
MNTFQRAAASFNALVRPLIKAPVIGKYIGGAITEITYTGRKSGEEFSIPVGYKQRGDEVTIGVAFPDKKSWWRNFYPDGGPIRIDLGGATRTGHAVAHKKGAGVFVKITLDRT
>CP032762.1|AYJ48127.1|1491724_1492528_-|hypothetical-protein
MPAVRRCLLLASGSILTALVCAAPASALPVPGDFADVPSRTSLSFVHSPTGLRVGTGNENEARPGLSTVKLYMADYAVRHGDGSPADLDAAARMVQLSDDGAASTLDSKYPQAIDATAAEYGLTSTSRGGFWGSSYTSTADTVTFLEAKKRSDPSSPVLRWMNSSAPVAADGTNQDWGTGELADSTGTKWGWADDSSSVVASASIGDEFSVAANTYGPPSAQTQDVLDALGSFDLTPPPAPLPAPVLPDIDQWLAGLIGGSGNAPRG
>CP032762.1|AYJ48126.1|1491309_1491696_+|YbaB/EbfC-family-DNA-binding-protein
MRPRCDPAVVTAGREEEELTAKAARIHRALQTIRGIARSGGGEVRIEVDVDGRITDLVLSESFSAISADVIVQTHASALDEATRAAGDIKRELLEDPRVSALVDRTTAARPTYPTTDLRQPPSIYDRW
>CP032762.1|AYJ48125.1|1490875_1491340_+|hypothetical-protein
MNEQLSPLEAQNFSFDLLENSLAVLPAGARLDRVHPDFPHAQLSFAKFEPSYDDNTTIDGPHRFSVAFWVVGGGDGRAALERLVRRWTSWGWFVDDRSGGDLGFVRATSFDGYRLVARLSMDGEVSLGVSSPSFPFENCERPGQTYAPGVILQS
>CP032762.1|AYJ48134.1|1498259_1498460_-|transcriptional-regulator
MKNDVRRRRLQLGWSQAELADRIGVTRLTVISLEKERYDPSLPVAFRLATAFDCAIEDIFMPDESA
>CP032762.1|AYJ48135.1|1498461_1498863_-|hypothetical-protein
MTVRRILAGAVALATSLVIGVLAFLLSPVAPAISGVVFALCALPVGIGLGWVVFVAPATTADITEDDVESRWLNSALSGTATDLVVVMGLSLTAVSITRVDLSPTLLLTSLLVVAFGSCTLRYALQRYRTLSA
>CP032762.1|AYJ48136.1|1498921_1499131_-|hypothetical-protein
MLPLLARKYLYRYLIVAIGLPILARLLVLGGLTIEKRSGKPNIISKALKKGGAFAQRRADKSAGKNKKK
>CP032762.1|AYJ48137.1|1499144_1499411_-|DUF1049-domain-containing-protein
MTATDPTTTRPAPRRKGGVFSKFALVIALVLVVALVIFVLQNTVHTRINFIGWNFDLAQGVWLLGAAVVGSIITLAVSAAVRVRRAVR
>CP032762.1|AYJ48138.1|1499501_1499672_-|CsbD-family-protein
MSFIDKAKNAAEDALGKAKEVVGDVTDNKDLKAEGKTDQGSAGVKKVGENIKDTFK
>CP032762.1|AYJ51602.1|1499937_1500399_-|N-acetyltransferase
MLEYYSDPEVCRYLLHGPWTADDARKNVEIRSGRTNLDDGDLNAVVLLDGRIIGNLSAHFVNETNHTVELGWTFSPRFHGYGYATEAATAFIETVFELPRVHRAIAQMDARNDSSARLAERLGMRREGHFLQDWWNKDAWSDTFLYALLRDER
>CP032762.1|AYJ48139.1|1500615_1500999_-|anti-sigma-factor-antagonist
MITATNPLSIDSFALPPELTSRFTIETESYSAEFAILRVAGDLDITARAELVDSLDQLVGRGSDVLVDLSGVSFMYSGAANAVIDAASASTADVRIFAPTRPVRMILDVLGAGSLLVDSGFDRRAAV
>CP032762.1|AYJ48140.1|1501277_1501814_+|hypothetical-protein
MTKVKPSGEVHDTGPHVVPSGNPRESMALGGGGGGAGSSGTCRGTGAKVGGSAGSTKICWGAAGSSYVEGACTDATMLGGTSGGVSTVVGGVVVAGLDVALEVDVGVGDGSALSVPAVHAVSRLIEATASRNAARGRHWDPLGRFGMSPQSVVSVLRREVRCSRRRFIDRANRTARCG
>CP032762.1|AYJ48141.1|1501992_1502472_-|MarR-family-transcriptional-regulator
MTSNLRTTTIEAWRADNPGLDTSAMTLVALVKEVSEALRRVVDDVYEESPLSPADMELLVPLRYDTAGTTAIRLAERLGMSRAGVSKTLSRLESRKIIYREENLQDKRSALVRLTTYGETVVDDLFPRELRAHAAILARLGEDRDRVTTALELLARAFR
>CP032762.1|AYJ48142.1|1502540_1503458_+|NAD(P)/FAD-dependent-oxidoreductase
MTECDVVIVGGGAAGLSAALVLSRARRTVLVIDSRSPRNANATHLHGFLTRDGMGTSEFLEIGRREVLGYGAKIERGRVQSISVDPSDVAFTVRCDDGIAVSARSVLVATGLRDELPAVPGAAELWGRSVLHCPYCHGHEVRDQPIGVLGGDNRPYSIHQASLVRQWSENVVFFPNGIRLDPQERRRLLARGVYIAEGSVQRVDDSEGDGLTVVLDDGRTVQRAALFVGPQFVPQNQLLIEVGASTDESGWIVTDAVGGTSVAGVWAAGNVSSSPAQIVDAAGAGSRAAIAINHHLLEQDIVAAL

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Crispr_ID: CP032762_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_10

2235061-2235163

Orphan

Consensus_repeat	Method
CCGTCAGAACGCATAACGGGGGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_10

>merge|CP032762|10|2235061-2235163|CRISPRCasFinder
CCGTCAGAACGCATAACGGGGGAGTGGATCGGGTTCGGATGTGGGTTCGGATTTACCCCCGTGTTGTGCGCATTCATACCGTCAGAACGCATAACGGGGGAGT

>CP032762|10|10|2235061-2235163|CRISPRCasFinder
CCGTCAGAACGCATAACGGGGGAGT	GGATCGGGTTCGGATGTGGGTTCGGATTTACCCCCGTGTTGTGCGCATTCATA
CCGTCAGAACGCATAACGGGGGAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ48690.1\|2243670_2244762_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP032762.1\|AYJ48679.1\|2229746_2230955_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380464
CP032762.1\|AYJ48689.1\|2243026_2243689_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP032762.1\|AYJ48680.1\|2230951_2231716_-\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|236205
CP032762.1\|AYJ51708.1\|2227226_2228666_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169
CP032762.1\|AYJ51709.1\|2234005_2234953_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48676.1\|2226618_2227302_-\|DUF1211-domain-containing-protein	unknown	unknown	gnl\|CDD\|377696
CP032762.1\|AYJ48685.1\|2238036_2239488_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
CP032762.1\|AYJ48681.1\|2231776_2232376_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP032762.1\|AYJ48692.1\|2247573_2248638_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
CP032762.1\|AYJ48687.1\|2240080_2242138_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
CP032762.1\|AYJ48682.1\|2232372_2233998_+\|DNA-alkylation-response-protein	unknown	unknown	gnl\|CDD\|183199
CP032762.1\|AYJ48691.1\|2244941_2247389_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
CP032762.1\|AYJ48675.1\|2225845_2226622_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
CP032762.1\|AYJ48686.1\|2239555_2239846_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|236117
CP032762.1\|AYJ48688.1\|2242144_2242942_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
CP032762.1\|AYJ51710.1\|2249032_2250739_+\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ48684.1\|2236305_2237955_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
CP032762.1\|AYJ48678.1\|2229460_2229706_-\|DUF2630-family-protein	unknown	unknown	gnl\|CDD\|378515
CP032762.1\|AYJ48677.1\|2228695_2229454_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181324

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ48679.1\|2229746_2230955_-\|hypothetical-protein	gnl\|CDD\|380464	cd19542, CT_NRPS-like, Terminal Condensation (CT)-like domains of nonribosomal peptide synthetases (NRPSs). Unlike bacterial NRPS, which typically have specialized terminal thioesterase (TE) domains to cyclize peptide products, many fungal NRPSs employ a terminal condensation-like (CT) domain to produce macrocyclic peptidyl products (e.g. cyclosporine and echinocandin). Domains in this subfamily (which includes both terminal and non-terminal domains) typically have a non-canonical conserved [SN]HxxxDx(14)Y motif at their active site compared to the standard Condensation (C) domain active site motif (HHxxxD). C-domains of NRPSs catalyze peptide bond formation within (usually) large multi-modular enzymatic complexes. NRPS can use a large variety of acyl monomers (approximately 500 different possible monomer substrates as opposed to the 20 standard amino acids in ribosomal protein synthesis) to construct bioactive secondary metabolites of 2 to 18 units long (with various activities such as antibiotic, antifungal, antitumor and immunosuppression). There are various subtypes of C-domains such as the LCL-type which catalyzes peptide bond formation between two L-amino acids, the DCL-type which links an L-amino acid to the D-amino acid at the end of a growing peptide, starter C-domains which acylate the first amino acid with a beta-hydroxy carboxylic acid, and heterocyclization (Cyc) domains which catalyze both peptide bond formation and cyclization of Cys, Ser, or Thr residues. Typically, an NRPS module consists of an adenylation domain, a peptidyl carrier protein (PCP) domain (also known as thiolation (T) domain) and a C-domain. NRPS modules may also include specialized domains such as the terminal-module thioesterase (Te) domain that releases the product via hydrolysis or macrocyclization and any of various C-domain family members such as the epimerization (E) domain, the ester-bond forming C-domain, dual E/C (epimerization and condensation) domains, and the X-domain.	0.000709343
CP032762.1\|AYJ48689.1\|2243026_2243689_-\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.31405e-38
CP032762.1\|AYJ48680.1\|2230951_2231716_-\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|236205	PRK08259, PRK08259, crotonase/enoyl-CoA hydratase family protein.	9.99609e-160
CP032762.1\|AYJ51708.1\|2227226_2228666_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	2.98376e-109
CP032762.1\|AYJ48682.1\|2232372_2233998_+\|DNA-alkylation-response-protein	gnl\|CDD\|183199	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional.	0
CP032762.1\|AYJ48676.1\|2226618_2227302_-\|DUF1211-domain-containing-protein	gnl\|CDD\|377696	pfam06736, DUF1211, Protein of unknown function (DUF1211). This family represents a conserved region within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. These may possibly be integral membrane proteins.	1.13001e-20
CP032762.1\|AYJ48690.1\|2243670_2244762_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.11333e-32
CP032762.1\|AYJ48678.1\|2229460_2229706_-\|DUF2630-family-protein	gnl\|CDD\|378515	pfam10944, DUF2630, Protein of unknown function (DUF2630). This bacterial family of proteins have no known function.	3.04888e-32
CP032762.1\|AYJ48692.1\|2247573_2248638_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	7.49829e-40
CP032762.1\|AYJ48687.1\|2240080_2242138_-\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	7.95028e-05
CP032762.1\|AYJ48685.1\|2238036_2239488_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
CP032762.1\|AYJ48691.1\|2244941_2247389_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
CP032762.1\|AYJ48675.1\|2225845_2226622_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.81947e-54
CP032762.1\|AYJ48686.1\|2239555_2239846_-\|chorismate-mutase	gnl\|CDD\|236117	PRK07857, PRK07857, chorismate mutase.	5.25196e-38
CP032762.1\|AYJ48688.1\|2242144_2242942_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.68227e-91
CP032762.1\|AYJ48684.1\|2236305_2237955_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
CP032762.1\|AYJ48681.1\|2231776_2232376_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.97825e-16
CP032762.1\|AYJ48677.1\|2228695_2229454_+\|SDR-family-oxidoreductase	gnl\|CDD\|181324	PRK08251, PRK08251, SDR family oxidoreductase.	2.11495e-141

>CP032762.1|AYJ51709.1|2234005_2234953_-|hypothetical-protein
MDFEQTEMFSRVEALARGHTDDDLRRGRASGLLVTVRRGYFIRADVYRTLDPHRRHSMLAEAIYAESSADTVFSHVSAAVLHGMETWDIPLDKVTFTIGRSYAGKRGRQRILHGTPVPEGDLTVKDGFPVTTPARTIVDLARSLPLEPAVCIGDYALRTGLTTQDELSHALGDARTRTGVAKARQAVSFMTASSASAGESRSRMQLDTLPLPPPLLGRTLYDEFGVALASVPFLYPDHGVVGIYEGQGLYGSEAVVTDLQDKRIRNHMQDLGWVVVHWNWEDLSSPRELTDRIARAFLLAANQHKPRGSFAAHPS
>CP032762.1|AYJ48682.1|2232372_2233998_+|DNA-alkylation-response-protein
MTFPVTHEVFNQVPDLLPYNTSQDRSLREGLDREGAGWSLGELNELGDLAGSVEVQEWGRLANENPPVLRTHDRYGNRIDEVEFHPHWHDLMSVAVANGLHATPWQCDRPGAHVARAAKFYAWGQADAGHMCPISMTYAAVPALRHNSELTSMYESLLASTHYDFGLRTPTEKRGLIAGMSMTEKQGGSDVRANTTTAVPSSDGSFTIVGHKWFTSAPMSDMFLTLAQAPGGLSCFLLPRVLPDGTRNRIALQRLKDKLGNKSNASGELEYQGATGWLVGEEGRGVPTIIEMVNMTRLDCVIGSAAGIRNATVRAVHHARHRSAFGASLADQPLMRNVLSDLIVESEAATAVMMRLAGATDRAVRGDAEESALRRIALAVTKYWVCKRAPSHVAEALECLGGNGYVEESGMPRLYRESPLMSIWEGSGNVAALDSLRALAKQPEAVEAYFTEVGRAAGADSRLDDAVSRLGKELADRSDIEYRARRVVELMALVFQGASLVRHGDPSVADAFCASRLGEDWGGAFGTLPTGVDTAAVLSRI
>CP032762.1|AYJ48681.1|2231776_2232376_+|TetR/AcrR-family-transcriptional-regulator
MPYRRTTAVQARLDAGREKLFASAIEVLSARGYGGLSIASVAAAAGVSAGSVYTHFESKSDLVVAIFREVCSREVDAVAAASSSGDVVERVTAIVETFAGRAMKNRTMAYALLAEPVDPAVDAERLVFRRSFTAAISQAIVAGVAAGEIPEQNVELAAAGLVGAVGEILVGPLGPDRASGPEVIPDLVAFALRSLGVTP
>CP032762.1|AYJ48680.1|2230951_2231716_-|crotonase/enoyl-CoA-hydratase-family-protein
MAVRIERSGPVTTIVLSRPESRNAVDGPTAAELVSAFEEFDADDNAAVAVLWGEGGTFCSGADLKALGTERSNHATEHGDGPMGPTRMRLSKPVIAAVSGYAVAGGLELALWCDLRVIEEDSTFGVFCRRWGVPLIDGGTVRLPRLIGASRAMDLVLTGRAVDADEALAIGLANRVVPVGRARSEAEALAAQLALLPQTCMREDRLSLLEQDGLDEESAITNEFRHGAISMAADALGGAQQFASGAGRHGSSTP
>CP032762.1|AYJ48679.1|2229746_2230955_-|hypothetical-protein
MIDRLSVVDDIFLRTHRGYGLPIILQGIWRSDEIVDVVDFAAVHANLALGHLGRRVVTPRIRGARRRWRPCTDALPLAYEPDPIADVDVLDWADAQGDVDLDPELGPGWRMSLVHTDSGGTVMSLVCSHALADAAGLVRAAGAAFDGRAPRPAPSKSTSDLADALSLAARVSVASIRATAGLIYTRSARRELGAYRSAARSLKKHDVHISSAVFDIDATLSNSEFISVVARVAAALGESEPVTVNVPFRSKIKGSNRIGMATVEVSAADTALQIKSATKAAFGRPAGAPSGFPAEAVQLMSDEKAASLTASPGTARVLCSNIGPIPAALESIAGRRARSLATRAIHPGAEGKTTATALSAYVSRTEATTTLSLVATEKQYAPILADRAATVLEGCAFEYKSW
>CP032762.1|AYJ48678.1|2229460_2229706_-|DUF2630-family-protein
MSEHDIYSKIEQLVATEHKLRSQTEAGELDPVDEQAQLASIEHALDQCWDLLRQRRARLDAGQNPDEATANPVEQVEHYLQ
>CP032762.1|AYJ48677.1|2228695_2229454_+|SDR-family-oxidoreductase
MGKTRNKILITGASSGLGEEMARRFAAQGKDLALCARRLDRLETLRDELIIANPGISIAIRSLDVTDHDAVVRVFAEMRDELGGLDRVIVNAGLGKGAKIGSGRADANLATARTNFIGALSQCEAALEIFRAQKYGHLVLVSSISADRGLPGAKAVYSASKAGVAALGEALSAELAKTDIVVTTLLPGFIATDMSSKAGDNKALTATLDEGVSAMVTAIEKEPRRAALPGLKWRGIDAALRFLPNEVTNRLV
>CP032762.1|AYJ51708.1|2227226_2228666_-|NAD(P)/FAD-dependent-oxidoreductase
MTEQSRDEFDVIVIGGGPVGENAASYAIAGSDRTAVIVEHELVGGECSYWACMPSKALLRPSEVLETARNMPGVKELVGERTLDVDAVLARRESFTHSLDDSSQVDWAESAGISVVRGHGRLSGEKTVEVGDRTLTARHAVILATGTTASVPNTQGLRDALPWTSRDATNIHEIPKRVAVIGGGVVASEAATWLLSFGSEVTMIVRGSRLLASSEPFASDLVAEALRKRGAKIIFDADLTAVSRPSAEDTGIGKVHGGPAELTVGGETITVDEILVAAGRKPASTDLGLSLVGQEDGKYVDVDDHLQVPGAPWLYATGDINGRAPLTHMGKYQGRVAGDVIAALADGKPLHGKRFTASADHGQIPQVVFTPLQVAAVGHTEKQARDAGIDVEILGVDIAVAGSSLYQDNYSGHAQLVVDKAADVIVGATFVGPGVDELVHAATVALVGKVTLDDLWHAVPSYPTVSEVWLRLLESRRQQ
>CP032762.1|AYJ48676.1|2226618_2227302_-|DUF1211-domain-containing-protein
MARCAVVPDGERSVVAAARIASSAVGTSVETQRGFERLVNFSDAVVAIAATLLILPLVDIAEPSADLTTWDLVSEHFVEILAFVLSFAVIFRLWLTHHSIFKDLTGYTMPLAWANFLWLLSIVFLPFPTKLIAEKDGFDPSATSLYVGTISVSVIAIALIEWVIERNPDIAPYNSGRSLVGGIITAALMLVACALSFTVVGLWSLAILGLESPVRRIIASRTAKLKR
>CP032762.1|AYJ48675.1|2225845_2226622_-|IclR-family-transcriptional-regulator
MSQENGSKQQPLLVLGKITEILDAFSFDKPSMTLGELQHATGIPTSTVQRLVTNLVSQGFLDRSGDGIRIGVRMAYWAATATKDLDVLSIVNPVLKEVRDLTTETTCFFRPEQNYRVCVAIAETRHALRRDMYVGKVIPLNVGSASRVLLAYDDALAERILSGTLESMTDASITEADTLRATLVQARADGYAITTGERESGASGLSAPVFDSAADVIGALTISGPTLRMPLSQCEEWVDLLVSHAEQITRTLGGRYPS
>CP032762.1|AYJ48684.1|2236305_2237955_-|glucose-6-phosphate-isomerase
MSGDITGTEAWKNLTAHHSAISEKKLRDLFADDPNRGRTFTLSVGDLHIDYSKHIIDSETVSLLVDLARAADVEGRRDAMFAGEHINTSEDRAVLHTALRLPADATLEVDGQNVVADVHEVLTRMGNFTDRVRSGEWLGATGEKITTVVNIGIGGSDLGPVMVYNALRHYADAGISAKFVSNVDPADLVAALDGLTPASTLFIIASKTFSTLETLTNATAARRWLVDALGEDAVAKHFVAVSTNAERVSEFGIDTANMFGFWDWVGGRYSVDSAIGLSVMAVIGRDAFGEFLDGFHRVDEHFRTTPFEQNAPALLGLLGLWYSSFFGSETRAVLPYSNDLSRFPAYLQQLTMESNGKSVKADGSPVTTSTGEIFWGEPGTNGQHAFYQLLHQGTRLIPADFIGFAEPTDDLPTRDGTGSMHDLLMSNYFAQTKVLAFGKTADEIAAEGTAADVVPHKVMPGNRPSTSILAPKLTPSVVGQLIALYEHQVFVEGVVWGVDSFDQWGVELGKTQALELTPVLTDSEAPAQQGDSSTDALVRWYRDQRGRAK
>CP032762.1|AYJ48685.1|2238036_2239488_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MEITQLIESIQPKLWIGGRAVDAENGATFEVNDPATGKAIAVVADASPADAKKAIDAASAAQKSWGKTPARERGEILRAAFEKITERSDDIAAIMTAEMGKALAESKAEVKYGAEFFRWFAEEAVRIGGRYAPAPAGNGRILVSKVPVGPVLAITPWNFPLAMGTRKIGPALAAGCTIIVKPASETPLTMLFLAQLLSEVGLPEGVLSVLTTSKSSAVSTPILEDPRLRKLTFTGSTGVGKKLVEQSAGGLLRTSMELGGNAPFVVFDDADVDAAVEGAILAKLRNGGEACTAANRFYVANAVREEFTTKLVEKMKAFTLGPGSNPDTKLGPLINADQLETVQALVDDAVNAGATVALGGTAPGGDGYFYPATVLTDVPPNARILKEEVFGPVAPIVGFDTEEQGIDAANDTEYGLASYIYTRGLDRALRVADAIDSGMVGVNRGVISDAAAPFGGVKASGFGREGGSEGIEEYLETKYIALT
>CP032762.1|AYJ48686.1|2239555_2239846_-|chorismate-mutase
MASTTKIDSDTALPTSEAEIDSLRQEIDRLDSEILAAIQRRSEVSQLIGRTRMASGGPRMVHSREMKVLDRFSSLGQEGHTLAMLLLRLGRGRLGR
>CP032762.1|AYJ48687.1|2240080_2242138_-|ABC-transporter-permease
MLRLATANLRHHRGLFLGAFATLVVGGAMIGACAQLLVTAVMAPDEGFDVQISGSGVLDGDGAPTTATEHYTPLGSGAEDLMSVAGTVGVIACFLTGVTLSTTVGYVIAARRREFGILRLLGTTAPILRRLLVWEIVALAAVAGLAGAAVSLPAAPMILGILIDTGFVSEKFDISGRAFALVPTVAATIVVALAGARVGSKRVLGVSPLSATRSINVSHRIRARRWALSGAALVLVVLIGALGAGAPGDGAVGLGLLLPMILCGALAAVGPVVIPIVVGLLSRSVDLVRGRRGGVVHLATRTARSARDATTVLAVPALLFVGIAGSVLVTIGADNTAVARATRDEVRADFVVTNPPQDTDWASVESGLVDASLSTELIATDRDTAIGLDAAGIDPVAFLATRSVDVTDGRLEDVTDGPVPGVALSAQAASDDGYSVGQDLRFATGDGISHTLPIVAIVAGSPTLVPSILVSRDWLAQNAPDAVTGDAFVAADPADTDAVLSSLRSIAGDGEIVAVSDWLDSSEAEYASNSLASVIVVLAPAGLFCFLATVNATLMWSTTRSGTRRGLTRIGVSSGVGLRIELLSGALLMGGGLALGLAVTAVTGVMVRTALLGSPLAAPTSLPVVSLFVVTGVPIAAVALPLLLTLGRRSGRGRKSEVEDCGSPAEMFSSSIDFSGPHPGGTLDR
>CP032762.1|AYJ48688.1|2242144_2242942_-|ABC-transporter-ATP-binding-protein
MPSNAQYERSLPPSRGITAAQGLVKRFDKKSVPVLGGITHSFAPSSWTAIMGSSGSGKSTLLNCLSGLEQPDQGMVTLDGIPLGGLDDDQLAELRRDRCGFVFQDYNLFDALDVAENVALPARLAGAHSPVRGHVTDGRVREVLGRVGLADRARDAIDTLSGGQRQRVAIARAMLNQPSVVFADEPTGALDVRTAHDVLVLLRQVASQFGSTVVMVTHDAWAASWADEVIVLADGVVVDRLPGGDADRVSRAVNTVHDNARRKGR
>CP032762.1|AYJ48689.1|2243026_2243689_-|DNA-binding-response-regulator
MPHSSLKIVLADDLPLLREGIAAVVESAGHRVCASVSSVASLHDAVSAHDPDLVITDVRMPPTFTDEGLAAAVELRRTKPGLSVLILSQYTSVAYVSDLIDNPAPGGIGYLVKERVGHVREFVEALEKVAAGGTVIDPEVVQALVGSSRRQGSLAVLTARELEVLSLMAEGHTNARIAETLVVSDAAVRKHIGNIFAKLPLGSDTDRRVTAVLTYLRGIS
>CP032762.1|AYJ48690.1|2243670_2244762_-|sensor-histidine-kinase
MVVGGTVLILSIPLLIVMSVPGWRDAAARTIVTAEVSRLSVIEPVKAQAWKESNTAVLRHAAYSLVAAAVLAPVAAAVLVGGAIAVPTLLAAPVLVRSDPISVFSLQVTTMPAALALPVIALPTAVLILYLCAAIATANSELAHTVPMRSTAELEVEVDRLQTSRTGLLDAFDTERARIEGMLHDGVQHRLVAVGLSIGLAEQSARDDRTRELLETAHRQVDESMRELRRTIRGILPQALTESGLLAATEDLLGELPIEVSLNLPTDYRPPSRVEQVSYFVISEVITNSIKHAQADAVSITAAVIDGTWRLVISDNGIGGADPASGRGLTGLSHRVDALGGTISVSSPLGRGTTVEMRCPIPA
>CP032762.1|AYJ48691.1|2244941_2247389_+|DNA-helicase-PcrA
MNTNLTAVPAPGKSKSEALLEGLNPQQREAVMHSGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVMPGQVLAITFTNKAAAEMRERVAGLVGPRANSMWVSTFHSSCVRILRNQASLLPGLNSNFSIYDADDSRRLLTMISKDLQIDTKKFSARLLSTAISNLKNELIGPDDAASDAEKQMVELPKLVAKVYAIYQQRLRAANAMDFDDLIGETVGLLQAFPQVAEYYRRRFRHVLVDEYQDTNHAQYMLVRELVGREDSDGALQGTISPGELCVVGDADQSIYAFRGATIRNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISRNTGRRDKKLWTDSGEGELIVGYVADNEHDEASFVASEIDRLVDNHDVRYDEVAVFYRTNNSSRALEEIFIRLGLPYKVVGGVRFYERKEVRDMVAYMRVLSNEDDTVSMRRILNTPRRGIGDRAEACVAVHAEQRDISFSKALHDAAAGKVALLNSRSQKLIGQFLEMLDELRAVLGSTDDDGNDIGDIGEVVEAVLDRTGYRAELEASSDPQDGARLDNLNELVSVAREFTSEARNLAAVEAESEVEVEVEEGTPEPGSLAAFLERVSLVADTDQIPDSGTGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARHRLYVTRAIMRSAWGQPINNPESRFLQEIPQSLIDWKREDPGVGARPRSGGFGGGGFGGGGGYGGGGFGGGGFGERRGQQSTPSFGSARARNNTLVLAVGDRVNHDKYGLGTVLESTGSGTSAMVLVDFGTSGRVKMMLIGGVPMTKL
>CP032762.1|AYJ48692.1|2247573_2248638_-|M23-family-metallopeptidase
MSQHRASFTTSRFVKPATAVESAPTVYSTQTSWNAEADDFETTGYDYFASNYGSAETYHDSELHSTPELDVTAGPDFVSGSNIVTDIIPANEIAVARKGGAHRIPMPPAAMKGRAAVLAVAAGAVVAAGQAVIDHGPATPSTSEEVALAAGAAPAAPGIAATAVPQAASFAADTTPDVSPSSAPQILNVANPVDLSQFSDLLAKGQRFSEERAAREAAARRPLFVLPAVGTYTSNFGQRWGVLHAGVDIANAIGTPILAVADGKVIDAGPAAGFGMWVRLQHADGTITVYGHIDSATVSVGQEVMAGDQIARMGNRGFSTGPHLHFEVHLPGENKIDPLPWLASRGIGLGPESD
>CP032762.1|AYJ51710.1|2249032_2250739_+|hypothetical-protein
MVTLLSAVAACAALGLDTASSTDGGDPGPGVVLAAIVAVGPFASVALLAVLTVFARPALAGALTAGYGAVSVGQVMLDLGLVDSPIDANRLELFRPTTAEALDPAIGAYVLLGAHGAAVVGGILGLVAIGRASFEDGYGHSPRADLTGRASAVRFGGFLSVIAVVAALAAAAAMFAPPYISSDSIVLVPAVVESPLTIAIGSGLVALSVLVVVTAALASISPAVASAAVVGVGAGVFGLFGSRVVAGAASGAGIDVSTGAWVGAVSGAVLVMVGILGLPVSAVRDRRGGVEGPTRGRSSDAVHFMRWHVLAGACGVVAALALGAGALLPILELPTGLPDPRILATRTVAIAAFVLVIASVPLFFSLFAAVVRPALGVISVAALMASSGVLQSLVLATDIDGIGVGIGGFAIGVGAAAAAVCGLAVLVAGSAERDDVDTSDPVVDRPLAWVASIGGLVSAVGLGLPLYRGADVSAASFAEFPLGWDAWGQAVLAVTVLISVVVAARSRPARGAALLAGCVVAVVIYLLGWPLTQGRALDPSVGPGVAAGALGAVILAVAAILSARRRSQ

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Crispr_ID: CP032762_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_11

4261281-4261360

Orphan

Consensus_repeat	Method
CCGGCGGTAACTACGCACGCACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_11

>merge|CP032762|11|4261281-4261360|CRISPRCasFinder
CCGGCGGTAACTACGCACGCACGATGCAAGTCTCGAGCCGTGCGTGCGTAGTTACGCCCCGCGGTAACTACGCACGCACG

>CP032762|11|11|4261281-4261360|CRISPRCasFinder
CCGGCGGTAACTACGCACGCACG	ATGCAAGTCTCGAGCCGTGCGTGCGTAGTTACGC
CCCGCGGTAACTACGCACGCACG

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ50144.1\|4266386_4267688_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|225448
CP032762.1\|AYJ52040.1\|4271238_4271994_-\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
CP032762.1\|AYJ52035.1\|4256967_4257714_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|224423
CP032762.1\|AYJ50134.1\|4251988_4252813_-\|DNA-repair-protein-RecO	unknown	unknown	gnl\|CDD\|234622
CP032762.1\|AYJ50146.1\|4269374_4270442_-\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
CP032762.1\|AYJ50139.1\|4257710_4258487_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
CP032762.1\|AYJ52036.1\|4260950_4261274_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|227737
CP032762.1\|AYJ50143.1\|4264738_4265449_+\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP032762.1\|AYJ50138.1\|4255835_4256885_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
CP032762.1\|AYJ50136.1\|4253912_4255241_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
CP032762.1\|AYJ50145.1\|4267684_4268434_+\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|225049
CP032762.1\|AYJ50142.1\|4263008_4264742_+\|nitrite/sulfite-reductase	unknown	unknown	gnl\|CDD\|223233
CP032762.1\|AYJ50141.1\|4259757_4260801_-\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
CP032762.1\|AYJ52037.1\|4261411_4262620_-\|coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|180172
CP032762.1\|AYJ50137.1\|4255237_4255780_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
CP032762.1\|AYJ52038.1\|4265445_4266387_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP032762.1\|AYJ50147.1\|4270441_4271242_-\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|162725
CP032762.1\|AYJ50140.1\|4258490_4259645_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237654
CP032762.1\|AYJ50135.1\|4252934_4253849_-\|GTPase-Era	unknown	unknown	gnl\|CDD\|234624
CP032762.1\|AYJ52039.1\|4268436_4269108_-\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|226146

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ50144.1\|4266386_4267688_+\|sulfate-adenylyltransferase	gnl\|CDD\|225448	COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism].	0
CP032762.1\|AYJ52040.1\|4271238_4271994_-\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	2.64311e-84
CP032762.1\|AYJ52035.1\|4256967_4257714_-\|alpha/beta-hydrolase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.32306e-14
CP032762.1\|AYJ50134.1\|4251988_4252813_-\|DNA-repair-protein-RecO	gnl\|CDD\|234622	PRK00085, recO, DNA repair protein RecO; Reviewed.	4.28576e-86
CP032762.1\|AYJ50146.1\|4269374_4270442_-\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.59989e-143
CP032762.1\|AYJ50139.1\|4257710_4258487_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	2.85075e-72
CP032762.1\|AYJ52036.1\|4260950_4261274_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|227737	COG5450, COG5450, Transcription regulator of the Arc/MetJ class [Transcription].	1.4495e-17
CP032762.1\|AYJ50143.1\|4264738_4265449_+\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.39609e-112
CP032762.1\|AYJ50138.1\|4255835_4256885_-\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	1.85217e-143
CP032762.1\|AYJ50136.1\|4253912_4255241_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	3.16916e-110
CP032762.1\|AYJ50145.1\|4267684_4268434_+\|sirohydrochlorin-chelatase	gnl\|CDD\|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	9.17831e-39
CP032762.1\|AYJ50142.1\|4263008_4264742_+\|nitrite/sulfite-reductase	gnl\|CDD\|223233	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism].	3.71369e-170
CP032762.1\|AYJ50141.1\|4259757_4260801_-\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	9.06986e-153
CP032762.1\|AYJ52037.1\|4261411_4262620_-\|coproporphyrinogen-III-oxidase	gnl\|CDD\|180172	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated.	0
CP032762.1\|AYJ50137.1\|4255237_4255780_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	4.84855e-72
CP032762.1\|AYJ52038.1\|4265445_4266387_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP032762.1\|AYJ50147.1\|4270441_4271242_-\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|162725	TIGR02140, Sulfate_transport_system_permease_protein_CysW, sulfate ABC transporter, permease protein CysW. This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.15774e-104
CP032762.1\|AYJ50140.1\|4258490_4259645_-\|molecular-chaperone-DnaJ	gnl\|CDD\|237654	PRK14278, PRK14278, chaperone protein DnaJ; Provisional.	0
CP032762.1\|AYJ50135.1\|4252934_4253849_-\|GTPase-Era	gnl\|CDD\|234624	PRK00089, era, GTPase Era; Reviewed.	5.8927e-160
CP032762.1\|AYJ52039.1\|4268436_4269108_-\|DUF1275-domain-containing-protein	gnl\|CDD\|226146	COG3619, COG3619, Predicted membrane protein [Function unknown].	2.32803e-37

>CP032762.1|AYJ52036.1|4260950_4261274_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MIFKGVRDGKPYPEHGLSLRDWSKIPPRQLRLDEIVTTTKVLELDRLLSEDSTFYGDLFPHAVHYRGVVYLEDGLHRAVRAALRNRTVLHARVFDYDFLAATPPVHE
>CP032762.1|AYJ50141.1|4259757_4260801_-|heat-inducible-transcriptional-repressor-HrcA
MSSTDDRRFEVLRAIVADYVSTQEPVGSRALVERHNLGVSSATVRNDMAVLEAEGYIAQPHTSSGRVPTDKGYRQFVDRIADVKPLSPAERRAILEFLENGVDLDDVLRRGVRLLAQLTRQVAVVQYPTLSVSSVRHLEIVALTPARLLMVLITDSGRVDQRIVELGDVIDDEELSQLRRLLGGALEGKRLAAASAAVAELAENAPASLRNATIRSASVLIESLVEHPEERLVLGGTANLTRNAADFAGDAGFPGSLRAVLEALEEQVVVLKLLAVTQDTRTVTVRIGEETQVEEMRGTSVISTGYGSAGMVLGGMGVLGPTRMDYPGTIASVAAVARYIGEVLAER
>CP032762.1|AYJ50140.1|4258490_4259645_-|molecular-chaperone-DnaJ
MARDYYGTLGVGQKATDQEIKRAYRKLARELHPDVNPDEAAQARFKEISTAYEVLSDPEKRRVVDLGGDPLQQGGGGGGGFGGAGFGGGLGDVFEAFFGGGAGGASRGPRGRTQPGADSLLRTRLTLDECASGVTKHITVDTAILCDLCTGSGTNGDSKPVRCETCGGAGEVQSVQRSFLGQVMTSRPCPTCRGAGETIPDPCRKCAGDGRVRSRRDISVKVPVGVSNGMRIRLASQGEVGPGGGPAGDLYVEIVEQQHEVFVRDGDDLHCTIRVPMVDAALGTSVSIDAIIDGPTEISIDQGTQPGAVAVLRGHGMPKLRSGIRGDLHAHLEVVVPAKLDSKQTQLLEDLKRLRDRDAAEVVTTGSQHSGGLFSRLREAFSGR
>CP032762.1|AYJ50139.1|4257710_4258487_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MAATVFYLRHLPDVGGTAVLDGKEGHHAATVRRIRVGERILLSDGAGGLADTVVTAVERDRLELLVDARSEAHRPTPTVGLVQALPKAERSELSVELATEAGIDSIYPWQSSRCVARWEGAKAVKGVAKWRGVAAAASKQSRRPFVPEVHDLLDTAAVVSLVTSVTARGGIVAVLHEAATAEFSSLPFRDVSEVLLVVGPEGGIDDKEIDKLTGAGATPVMLGPTVLRTSTAAAVALGAIGVSTDRWSSAPLDFGSAS
>CP032762.1|AYJ52035.1|4256967_4257714_-|alpha/beta-hydrolase
MNRIKIAYGAHPEQFGHLYLPEGSPTEPIPVVAVVHGGSWSGRYALNLGTQYAVEFARAGFAAWNIEYRRIDAGGAWPEISADVLAALNAIGDVVQEHSTLRFDMGDVRLIGHSAGGHLAMWAAGQQDSIIGLSRVVCQAGVLDLTVGPAKGIVSPVLEELLGVAYDDDPEAYRAASPIHLLPTGIPVRCIHVGLDVQVPVSQSERYVAAAVAAGDTASLTVVDGEDHFSFLRPGSECWKQSLAAVLD
>CP032762.1|AYJ50138.1|4255835_4256885_-|PhoH-family-protein
MSEHSEFPAERQVRSSMELAPDAVPPLLGASDENLRALEQVLSADIHVRGNAVTLTGKVADVALAERVISELAAVVKRAQPLTPDAVRRTVAMLTEGVSESPAEVLSLDILSRRGKTIRPKTLNQKRYVDAIDANTIVFGIGPAGTGKTYLAMAKAVQALQAKQVSRIILTRPAVEAGERLGFLPGTLHEKIDPYLRPLHDALHDMMDVEAIPKLMQAGVIEVAPLAYMRGRTLNDAFIILDEAQNTTAEQMKMFLTRLGFGAKIVVTGDVTQVDLPGGARSGLRAASEILTEVDDIHFAHLTSSDVVRHRLVSEIVDAYERFESSRESNEQIGNRAERRSGGPRSARR
>CP032762.1|AYJ50137.1|4255237_4255780_-|rRNA-maturation-RNase-YbeY
MSIEVSNESGMDISEPELVSVARFAIASMDVHPAAELSMVLVDSATMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPSFAADQAAAAGHPLEHELALLTVHGVLHLLGYDHAEPDEEKEMFGLQNRILEEWYEDLRRAEEADVQAARDERLLGKTGFARDENL
>CP032762.1|AYJ50136.1|4253912_4255241_-|HlyC/CorC-family-transporter
MSNAPALIVSAVVLVPVAGLFAAVDSALNTVSRARLEDMVKDERSGAIGLRSIVADRPRYVNLTVLLRILCEIAATVLLAGGMMDLFSETLALAVTAIVMVLVSYVAVGVGPRTLGRQHAYSIALSAAFPLRALGWILGPVSRLLILIGNAITPGRGFRNGPFASEIELRELVDMARERGVVADDERRMIQSVFELGDTSAREVMVPRPEMVWIESDKSAGQATSLAVRSGHSRIPVIGENVDDIVGVVYLKDLVQQTYYSTDGGRGVRVDQLMRPAVFVPDSKALDSLLAEMQRDRNHMAVLVDEYGGTAGLVTIEDVLEEIVGEIADEYDADEVAPIEDLGDGRYRISARVPLEDVGELFGIDIESEDVDTIGGLLGYELGRVPLPGSRVETHGLTLVGEGGADPKGRVRITTVLVERVPAPEGDDRDDQVSETEDADAR
>CP032762.1|AYJ50135.1|4252934_4253849_-|GTPase-Era
MTDSSEHDFRSGFICFVGRPNTGKSTLTNALVGSKIAITSSRPQTTRHTIRGIVHREHAQLILVDTPGLHRPRTLLGQRLNDLVQDTYSEVDVICLCIPADEKIGPGDRWILEQVRHIAPKTTLIGVITKIDKVKKERVVQQLMALSKLLGEDSHVIPVSAASGEQVEKLVDLLASELPQGPAFYPDGELTDEPEEILMAELIREAALEGVRDELPHSLAVVIEEVTPREGHDNMLDVHAILYVERSSQKAIIIGKGGSRLKEVGTASRLQIEKLLGTRIYLDLHVKIAKDWQTDPKQMGKLGF
>CP032762.1|AYJ50134.1|4251988_4252813_-|DNA-repair-protein-RecO
MRLYRDNAVVLRQHKLGEADRIVTLLTRDNGIVRAVAKGVRRTKSKFGARLEPFAHVDVLLYPGRNLDIVTQVHTVNAFGGDIVTDYGCYTTGCAILETAERLAGEEHAPAKRLHQLTVGALRALSERARPSELILDAFLLRAMGFSGWAPSLTECARCAAPGPHRAFHVAAGGSVCVHCRPPGSATPMTGVMDLMVALERGEWDYTETTSTAVRSQASGLVAAHLQWHLERQLRTLPLIERSAPHQGEPASSVGSTVGQDEDRDSATRTAYSA
>CP032762.1|AYJ52037.1|4261411_4262620_-|coproporphyrinogen-III-oxidase
MNLLAAPTAHLELPDAAFEGVGRRPFGIYVHVPFCATRCGYCDFNTYTAGELGTSASPQSWMEGLRRELGAAAALMSERAGHVPTADTVFVGGGTPSLLGGSGLTDVLDAVRGSFGLTTDAEVTTESNPESTSPEFFEQLHSAGFTRISLGMQSAAPHVLAVLDRTHTPGRAVAAAKEARAAGFDHVNLDLIYGTPGERDVDLDASLAAVLEAGVDHVSAYALIVEDGTAMARKVRRGELPMPDDDVLASRYERIDSVLSEAGLHWYEVSNWATGRDAECKHNIGYWDGGDWWGAGPGAHSHIGGTRFWNVKHPARYAEQLVSGELPVAGSELLTAGDRHLEQLMLEIRLRTGLSAAALDDSERRAADQVVADGLMVVEGENYVLTDRGRLLADAVVRAIAA
>CP032762.1|AYJ50142.1|4263008_4264742_+|nitrite/sulfite-reductase
MSSTTDAATPAASSDPARVAPRERTARPTKRRAEGQWALGYREPLNANEQAKKDDNPLNVRARIENIYSKQGFDSIDKGDLRGRFRWWGLYTQREQGYDGTFTGDENLDLLEARYFMMRIRCDAGALNVEQLRTLAGISKDFGRDTADLSDRENVQYHWIEVENVPEIWRRIEAVGLKTTEACGDCPRVVLGSPLAGEAVDEILDPTPAIDQIVERYIGKPEYSNLPRKFKTAISGLQDVVHEINDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGVWVPLAEVPDVWEGVVSIFRDYGYRRLRAKARLKFLIKDWGIEKFRQVLEDEYLHRKLIDGPAPEKPSRPRDHVGIQKLKNGLNAVGVAPIAGRVSGTILGQVADAAEKAGSDRIRFTPYQKLIVLDVPDDKLEALISDLDALGLPARPSHWRKNLMACSGIEFCKLSFAETRKRSQVLVPELEQRLADINSQLDVPVTININGCPNSCARSQIADIGFKGMLVDDGDGNQVEGFQVHLGGSLGLDSAFGRKLRQHKVNSTELGDYIDRVVRNFVKHREDGERFAQWAVRADEADLR
>CP032762.1|AYJ50143.1|4264738_4265449_+|phosphoadenylyl-sulfate-reductase
MSTRMDLSVDELKAIAERGARELDGANAVELLEWTEREFGKNFIVASNMQDAVLVHLAAQVRPGVDVLFLDTGYHFAETIGTRDAVEAVYGVNIINARADLTVPQQDAIEGKDLFAREPNRCCAMRKVAPLKKELANYSAWVTGIRRVEAPTRANAPLVSFDDAFGLVKINPIAAWSDDDMQRYIDEHSILVNPLVDEGYPSIGCAPCTVKPAPGADPRSGRWAGKAKTECGLHAS
>CP032762.1|AYJ52038.1|4265445_4266387_+|sulfate-adenylyltransferase-subunit-2
MTSTSTVLSERTTIDSDRFDTLDALESEAIHIFREVAGEFERPVILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDYVVAKYNLRLHVASVEDYIADGRLTERPDGIRNPLQTVPLLDSISENRFDAIFGGARRDEERARAKERIFSLRNAFGQWDPKKQRPELWNLYNGKHSPGEQVRVFPLSNFTELDIWRYIARENVELASIYYAHQRPVYQRDGMWMTPGVWGGPTESEELQTLSVRYRTVGDGSTTGAVLSDAADNEAILAEVAASRLTERGATRGDDRVSEAAMEDRKREGYF
>CP032762.1|AYJ50144.1|4266386_4267688_+|sulfate-adenylyltransferase
MGSQLLRLATAGSVDDGKSTLVGRLLYDTKSVLADQIDAVTRASVDRGLSTPDLSLLVDGLRAEREQGITIDVAYRYFATPARSFVLADTPGHVQYTRNTVSGASTAQLVILLVDARKGVITQTRRHAAVLALLGVPKLVLAVNKIDLVPDPAQVFADISAEFNSLTSSLGWATEDVTEIPVSALHGDNVAVRSTNTPYYDGPTLIEHLESVPVDAEPHRVGLRFPVQYVIRPRTAEFPDYRGYAGQVAAGTVSPGDEVLVLPSGTRTTVERIDTADGVLATANAGRSVTLILADDVDVSRGDTIVSPQDAPEPIGEFDATVCWLAEKPLRAGARLLLKHGTRTTQAIVGTLVEKFDEQNLTADPSPESLELNDIGRISVRVAEPIVADDYAVNRHTGSFLLIDPAGGNTLAAGLVGDALSAVELGTAAPAVV
>CP032762.1|AYJ50145.1|4267684_4268434_+|sirohydrochlorin-chelatase
MNTLIAVGHGSRDPRSERTVAAVVRQVRRRRPDLDVRVAFLDLTSPSVDEVLNEVASEGIRSAVLVPLLLGNAFHARVDLPALLDAARARHPHLVLVQAEVLGDDPRLIAAVRARIVQSGVDIADAGVGVLLTAVGSSHAPANQRTRALAERLLSGTAWTTAVTCFATARDPQPAEALARIEAAGADRIVVAPWFLAPGLLTDRVFDIVDELMPSAVRAGVLGDHPLVADVVSSRYETAALTVSTRITA
>CP032762.1|AYJ52039.1|4268436_4269108_-|DUF1275-domain-containing-protein
MFNSHARLSWVLAGLAGLVGAAAFTNTAGYFVTFMTGNTERGAVGFFRGENAMAGAAILLILTFVGGVVIASLCRRHLWKDHPHGATVLTTIALAIASVVDVILSGWSAPQVQFVPILFISFAMGALNTSFVKNGEVSIPLSYVTGTLVKMGQGIERHISGGSAKDWLEYFLLYAGFTLGAVIGGVMSVFITGPQVLIAATVVCLVTTLYTYQRTVEDSSILG
>CP032762.1|AYJ50146.1|4269374_4270442_-|sulfate-ABC-transporter-ATP-binding-protein
MTVQKSDEIEISVVGANKHYGDFAALDNVSIDIPKGSLTALLGPSGSGKSTLLRSIAGLEQLDSGQVILGGQDVTWISPQRREIGFVFQHYAAFKHLSVRDNVAFGLKIRKRPKDEIKRKVDELLEIVGLAGFHTRFPAQLSGGQRQRMALARALAVDPQVLLLDEPFGALDAKVREDLRTWLRRLHDEVHVTTVLVTHDQEEALDVADRIAVLNKGRIEQIGTPEDLYDRPDNNFVMSFLGQVARLNGQLVRPHDIRVGRDPSLSQAQASGTAESAGVTRAIVERVVHLGFEVKVELKNTATGEQFAAQITRGDSEALQLAPGETVYARATRIPKIASTGDVVETSPLERAASS
>CP032762.1|AYJ50147.1|4270441_4271242_-|sulfate-ABC-transporter-permease-subunit-CysW
MKIGLPVKISLRTVALLYLAALVLFPLGAILYRTFEDGFAAFWGLITTPASQSALQLSLLIVAIVVPINVVFGVITALALVRGRFRGKGIVEAIVDLPFAVSPIVTGVALILLWGANGWFGGVESLGFKIIFALPGMVIATIFVTLPFVVREVEPVLYEIGEEQEEAASTLGASSLQTFWRITLPAIRWGLTYGIVLTVARSLGEFGAVIMVSTNLPGISQTLTLLVNSRYEDFNQQGAYAASTLLMAIAVIVLLLMTTLDKKRTK
>CP032762.1|AYJ52040.1|4271238_4271994_-|sulfate-ABC-transporter-permease-subunit-CysT
MLWLSVIVLLPLAALTVKSFDDGIVGFWDAVTAPRAVATFKVTLEVSAAAALVNLVFGTLIAWVLVRDEFPGKRFVNALIDLPFALPTIVASLVLLSLYGPASPVGLVFNATKPAVVVALLFVTLPFVVRAVQPVLIELDNEVEEAAASLGANNWTIFRSIVLPVLLPSVLSGTGLAFARAIGEFGSVVLIGGNIPGETQIASQYIRELIEYDQPVDAAAISVVLLALAFVVLFVLRIIGNRLARREEQTR

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Crispr_ID: CP032762_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_12

5283330-5283439

Orphan

Consensus_repeat	Method
GCGATCAGATCGTATGAATGGACCATTCAAGCGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_12

>merge|CP032762|12|5283330-5283439|CRISPRCasFinder
GCGATCAGATCGTATGAATGGACCATTCAAGCGATGCGACGCTGCGGCACCGTGCGCTTGCATGTCACGCCAAAGCGATCAGATCGTATGAATGGACCATTCAAGCGATG

>CP032762|12|12|5283330-5283439|CRISPRCasFinder
GCGATCAGATCGTATGAATGGACCATTCAAGCGATG	CGACGCTGCGGCACCGTGCGCTTGCATGTCACGCCAAA
GCGATCAGATCGTATGAATGGACCATTCAAGCGATG

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ50903.1\|5288086_5288752_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|273425
CP032762.1\|AYJ50901.1\|5284868_5286065_-\|DUF885-domain-containing-protein	unknown	unknown	unknown
CP032762.1\|AYJ50895.1\|5277581_5278622_+\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
CP032762.1\|AYJ50899.1\|5281720_5283004_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224787
CP032762.1\|AYJ50891.1\|5273966_5275187_+\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|272979
CP032762.1\|AYJ50897.1\|5280244_5281102_-\|acyl-ACP-desaturase	unknown	unknown	gnl\|CDD\|153109
CP032762.1\|AYJ50907.1\|5292029_5292455_+\|DUF4307-domain-containing-protein	unknown	unknown	gnl\|CDD\|379491
CP032762.1\|AYJ50902.1\|5287188_5287971_-\|isoprenyl-transferase	unknown	unknown	gnl\|CDD\|237825
CP032762.1\|AYJ50890.1\|5273403_5273970_+\|lipid-droplet-associated-protein	unknown	unknown	unknown
CP032762.1\|AYJ50896.1\|5278665_5280069_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP032762.1\|AYJ50900.1\|5283527_5284811_-\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
CP032762.1\|AYJ52167.1\|5286208_5287132_+\|type-I-pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466
CP032762.1\|AYJ50906.1\|5291026_5291887_-\|mycothiol-conjugate-amidase-Mca	unknown	unknown	gnl\|CDD\|132487
CP032762.1\|AYJ50904.1\|5288748_5290770_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|224250
CP032762.1\|AYJ50905.1\|5290772_5291030_-\|hypothetical-protein	unknown	unknown	unknown
CP032762.1\|AYJ50892.1\|5275198_5275417_+\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|179195
CP032762.1\|AYJ50894.1\|5276888_5277458_-\|DUF4245-domain-containing-protein	unknown	unknown	gnl\|CDD\|379430
CP032762.1\|AYJ52168.1\|5292725_5293220_+\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|234693
CP032762.1\|AYJ50898.1\|5281275_5281671_+\|epoxide-hydrolase	unknown	unknown	gnl\|CDD\|226758
CP032762.1\|AYJ50893.1\|5275444_5276740_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ50903.1\|5288086_5288752_+\|hemolysin-III-family-protein	gnl\|CDD\|273425	TIGR01065, Hypothetical_UPF0073_protein_yqfA., channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.	8.73886e-57
CP032762.1\|AYJ50899.1\|5281720_5283004_-\|PhoH-family-protein	gnl\|CDD\|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	0
CP032762.1\|AYJ50895.1\|5277581_5278622_+\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
CP032762.1\|AYJ50891.1\|5273966_5275187_+\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|272979	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits. [DNA metabolism, Degradation of DNA].	1.96859e-139
CP032762.1\|AYJ52167.1\|5286208_5287132_+\|type-I-pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
CP032762.1\|AYJ50897.1\|5280244_5281102_-\|acyl-ACP-desaturase	gnl\|CDD\|153109	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain. Acyl-Acyl Carrier Protein Desaturase (Acyl_ACP_Desat) is a mu-oxo-bridged diiron-carboxylate enzyme, which belongs to a broad superfamily of ferritin-like proteins and catalyzes the NADPH and O2-dependent formation of a cis-double bond in acyl-ACPs. Acyl-ACP desaturases are found in higher plants and a few bacterial species (Mycobacterium tuberculosis, M. leprae, M. avium and Streptomyces avermitilis, S. coelicolor). In plants, Acyl-ACP desaturase is a plastid-localized, covalently ACP linked, soluble desaturase that introduces the first double bound into saturated fatty acids, resulting in the corresponding monounsaturated fatty acid. Members of this class of soluble desaturases are specific for a particular substrate chain length and introduce the double bond between specific carbon atoms. For example, delta 9 stearoyl-ACP is specific for stearic acid and introduces a double bond between carbon 9 and 10 to yield oleic acid in the ACP-bound form. The enzymatic reaction requires molecular oxygen, NAD(P)H, NAD(P)H ferredoxin oxido-reductase and ferredoxin. The enzyme is active in the homodimeric form; the monomer consists mainly of alpha-helices with the catalytic diiron center buried within a four-helix bundle. Integral membrane fatty acid desaturases that introduce double bonds into fatty acid chains, acyl-CoA desaturases of animals, yeasts, and fungi, and acyl-lipid desaturases of cyanobacteria and higher plants, are distinct from soluble acyl-ACP desaturases, lack diiron centers, and are not included in this CD.	7.55723e-67
CP032762.1\|AYJ50907.1\|5292029_5292455_+\|DUF4307-domain-containing-protein	gnl\|CDD\|379491	pfam14155, DUF4307, Domain of unknown function (DUF4307). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 132 and 153 amino acids in length. There is a single completely conserved residue C that may be functionally important.	8.85914e-33
CP032762.1\|AYJ50906.1\|5291026_5291887_-\|mycothiol-conjugate-amidase-Mca	gnl\|CDD\|132487	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme. [Cellular processes, Detoxification].	0
CP032762.1\|AYJ50902.1\|5287188_5287971_-\|isoprenyl-transferase	gnl\|CDD\|237825	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional.	4.64795e-134
CP032762.1\|AYJ50896.1\|5278665_5280069_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP032762.1\|AYJ50900.1\|5283527_5284811_-\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
CP032762.1\|AYJ50904.1\|5288748_5290770_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0
CP032762.1\|AYJ50892.1\|5275198_5275417_+\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|179195	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional.	2.88846e-15
CP032762.1\|AYJ50894.1\|5276888_5277458_-\|DUF4245-domain-containing-protein	gnl\|CDD\|379430	pfam14030, DUF4245, Protein of unknown function (DUF4245). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 188 and 235 amino acids in length.	3.6322e-54
CP032762.1\|AYJ52168.1\|5292725_5293220_+\|transcription-elongation-factor-GreA	gnl\|CDD\|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	2.65587e-64
CP032762.1\|AYJ50898.1\|5281275_5281671_+\|epoxide-hydrolase	gnl\|CDD\|226758	COG4308, LimA, Limonene-1,2-epoxide hydrolase [Secondary metabolites biosynthesis, transport, and catabolism].	2.49867e-29
CP032762.1\|AYJ50893.1\|5275444_5276740_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	3.0798e-148

>CP032762.1|AYJ50899.1|5281720_5283004_-|PhoH-family-protein
MLDTSVLLSDPWAVIRFAEHNVVLPLVVISELEGKRHHHELGWFARESLRMLDDLRVEHGRLDQPVPIGTDGGTLQVELNHTDPSVLPVGFRTDSNDSRILACALNLAAEGKDVVLVSKDIPLRVKAGAVGLPADEYHAHDVVNSGWTGMAELEVQAFDIDHLFSEGVIDLDGARDMPCHTGVRLLGGRSSALGRVTPDKQVQLVRGEREAFGLHGRSAEQRVALDLLLDESIGIVSLGGKAGTGKSALALTAGLEAVLERRTHRKVVVFRPLYAVGGQELGYLPGSESEKMGPWAQAVFDTLDGLASPEVMEEVIARGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGSGSRVVLTHDVAQRDNLRVGRHDGVAAVIEKLKGHPLFAHITLTRSERSPIAALVTEMLEEFGPAGA
>CP032762.1|AYJ50898.1|5281275_5281671_+|epoxide-hydrolase
MTDTLQAATVTAMFDALKTRDIDNVIARLDDTIVWHNVGLPKVKGITRVGKFMRLLAKPAYGFDVTIHNIASDGDIVLTERTDVLIWRRLRIEFWVCGTFELREDKIVVWRDYFDNLDFFKGLVKGAFRAM
>CP032762.1|AYJ50897.1|5280244_5281102_-|acyl-ACP-desaturase
MPTNMTDGDLLLRLEPAVEENLTRHIEEAEDWHPHEFAPWDEGRNFAFLGGEDWSPEQSHLSDVEILSATVGVLVADNLPAYHRELARALTGLGAWWKWTGRWTSEENRQAIVLRDYMVLTRAVDPVALERVRMEEMTKGYDAPSLHVLDIIAHFAIDETAAALRNTNTIALGGDEVLAKILTKIAADDTLQATFYVNIVNEAFNVVPDQMMRAIADRVTGYAIPVVDLPSKANSTEALKEAGIYDEDQQREKVFKPLLERWNFFGRDDLGDEGKKAREELAHLA
>CP032762.1|AYJ50896.1|5278665_5280069_+|class-II-fumarate-hydratase
MTQTDEQQFRIEHDTMGEVRVPIDALWRAQTQRAVENFPISGRPLERTQIRAMGLLKAACAQVNKDLGLLDGALADAIISAATEIADGKHDDQFPIDVFQTGSGTSSNMNANEVIASIAKANGVEVHPNDHVNMSQSSNDTFPTATHVAATEAAVTSLVPALKHLHEALAAKATEWKTVVKSGRTHLMDAVPVTLGQEFGGYARQIEAGIERVEATLPRLGELPIGGTAVGTGLNAPDGFGPKVVAELVKSTGVDALTAAKDSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLGEITLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAVAFGGASGAFELNVYIPLMARNVLESFKLLANVSVLFADKCVSGLEANVEHLKTLAESSPSIVTPLNSAIGYEEAAAVAKQALKEKKTIRQTVIDRGLIGDKLSEEELDKRLDVLAMAKVKD
>CP032762.1|AYJ50895.1|5277581_5278622_+|class-II-fructose-bisphosphatase
MTASTESTRAMAPDRNLALELVRVTEAGALASGRWVGRGDKEGGDGAAVDAMRQLVSSVSMRGVVVIGEGEKDEAPMLYNGEQVGNGNGPEVDFAVDPVDGTTLMAKGMPNAISVLAVAERGAMFDPSAVFYMEKIAVGPDYADVIDITAPVAENIARIAKIKKGSASDVTVCILDRPRHAELIQQVRDAGSRIRLISDGDVAGAIAAARPDSGTDLLIGIGGTPEGIIAAAAMRCMDGAIQGRLAPTDDTEKQKAIDAGHDLDRVLDTKDLVSGENVFFTATGVTDGDLLRGVRYAGGGAHTQSIVMRSKSGTVRMIDAYHRLEKLREYSSVDFDADESGQAPSF
>CP032762.1|AYJ50894.1|5276888_5277458_-|DUF4245-domain-containing-protein
MANSKPRILNNNRDMVWSLIPLVIACLIIAGVASQCTLSPGGPKQGPIPNFDVDAALQYDASELNFPIRNPVVPEDWTPNSGSRQTIAGEQGGDVSNVGYISGAGRYIKLTQSSAVEEVLVPFTVGEARYAAGTESIDGKEWVVYEQQGAESVWVTDLGDVRLLVTGSGSDEEFTELAAATTSATPLTP
>CP032762.1|AYJ50893.1|5275444_5276740_-|homoserine-dehydrogenase
MRVGVLGFGNVAAATVESFVSNRDLILSKTSTNIDVVRVATRTPSRAEGRVPVGCEISDDCWDVVNDESIDVVIELTGDVAFGRQLILGALSANKHVITANKALLARHGDEILAHADKVSRSVLFEGAVAVSIPIIKTLKESAAANRVSSVVGILNGTSNYVLSQMSEQGVDFADAVKDAQGKGYAEADPTLDINGEDAAYKITLLAALAFGVPIDFDAVEFRGIDTVELRDIEFAKSFGYRMKLIAYARLVHGRLDVGVEPTLVDSASMLAQVRGSMNGIALRGDLLGPAFLYGSGAGGVQTASAVLADLLELANRGADGGPADLGFQRGKTSLPEYLPALDRTRAFYIRVQLDDRTGSLAEVSAVLADAGVSVSVLHQDRSRNGVTDLIFTTHIISAAQLDRVLPLLQNVAGPGRSVVVHPILDAEGGA
>CP032762.1|AYJ50892.1|5275198_5275417_+|exodeoxyribonuclease-VII-small-subunit
MSEEVPVTELGYEAARDELVDVVKVLEQGGLDLDASLALWERGEQLATRCEEHLAGARKRVENALAHIAEED
>CP032762.1|AYJ50891.1|5273966_5275187_+|exodeoxyribonuclease-VII-large-subunit
MTSSTAEEPWPVRTVAMKVAGWIDKLGSVWVEGQLTQINARPGTRTAFLVLRDPSADMSLSVTCSPQLLDRSPVPLSEGAQVILYGKLSFYTGRGTISLRATDIRAVGVGELLARVERLRALLAAEGLFDPRLKRPLPFLPRTIGLITARASAAEKDVLTVAQRRWPAVHFEVRHTPVQGPTAVPAILDALKDLEGNVDVIILARGGGSVEDLLPFSDEALCRAISKATTPIVSAIGHEPDSPLSDHVADLRAATPTDAAKLVVPDAVAEQNLVADLRSRTAAALRNWVAREARGLEMIRHRPVLADPIAGIDLRSEEITRAIDAARRDVLRELAKQDTLVEHLRARLQTLGPAATLARGYAVVQRMVAGSDPEVLRSVDDAPPGTQIRVRVADGAVTAAVMGKVR
>CP032762.1|AYJ50890.1|5273403_5273970_+|lipid-droplet-associated-protein
MTRVPFAARLAAGVAVTVVEEARKLPSTAITFPMTVVSEVLASSMRLQQQVTALAIKGDQVIAALPLIGTPDQEQPSWAVFDDDLAAASDGDVDVPDHEPSPATGRFALYSTPPPDLPAEESPAPGSERPDIVDLVDYDTLALAQLRARLRTLTLDDLETLREYEGTSRGRAPFLTMLENRITTAKAK
>CP032762.1|AYJ50900.1|5283527_5284811_-|serine-hydroxymethyltransferase
MTDVNNLSLAELDPEVAAAMAGELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEHVDVIEDLARNRAKELFGAEFANVQPHAGAQANAAVLMALINPGDKIMGLDLAHGGHLTHGMKLNFSGKLYEVESYGVSKEDHRIDMDEVRKQALTAKPQVLIAGWSAYPRHQDFEAFRSIADEVGALLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGGPRSGLILAKKEWAKKINSAVFPGQQGGPLMHAIAAKAVAFKIAATPEFKERQERTLLGASLLAERLTAADVADKGVSVLTGGTDVHLALVDLRNSQLDGQQAEDLLHEVGITVNRNAVPFDPRPPMVTSGLRIGTAALATRGFGEAEFTEVADIIGTALATGEASDSLKERVVKVAQSKPLYDGLEDWGLLG
>CP032762.1|AYJ50901.1|5284868_5286065_-|DUF885-domain-containing-protein
MNADSFVREYLLLGLSFDRLEEGFVDAYTGDPELRRQIENAPSPEPRALARRAADLRAELKNTDLPQQRAEFVDVHLRALECSGRKFAGEDIGFVDEVFAYFDVRIEPGDQDEYLQAHRKMDEVLAGPGTLPERLAAHRAADVVPADRLQDCVDAFSSALRDRVRAEYSLPETEVVNYEVVGDKPWSGFNYYLGNYTSTVAINSDLEQQMANLPHLIAHEAYPGHHTEHCRKEAGLVSAGQLEQTLFLVNTPQCLMAEGLADLALKSIVGPGWGLWAQEIYADLGLRFDGEKAERLSQASGQLLGVRQDAALLLHDQHASQDDVAAYLERWSLTSSKRARQSLKFLSSPLWRAYISTYVEGYKLLGSWLDQGATVTERSALFGRLLDEPLIPSALRAN
>CP032762.1|AYJ52167.1|5286208_5287132_+|type-I-pantothenate-kinase
MSESSPYVEFDRAQWRTLRQSTPLVLTEEELVGLRGLGEQIDLDEVAEVYLPLARLIHLQVAARQRLFAATATFLGEKHPDRQVPFVIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYSTAELMRRGILHRKGFPESYDRRKLLRFVTEVKSGAEEVAAPVYSHVSYDIIKGQFHMVRQPDILIVEGLNVLQTGSRLMVSDLFDFSIYVDARIEDIESWYVKRFLALRKTSFTDPTSHFHHYAGLSDEHARIAAEDLWHSINLPNLVENILPTRPRATMVLRKDADHTINRLRLRKL
>CP032762.1|AYJ50902.1|5287188_5287971_-|isoprenyl-transferase
MKILPTKVRSVLYNVYERRLLTQLDDVAHPRHVAVMCDGNRRWARENGFTDVAHGHRMGALKIAEMLGWCDAAGIEMATIYLLSTENLRRDPDELDSLLEIITDVVEEICGPDKNWGVKIVGTLDQLPLATARRLKEAADMTAGRTGTHVNVAVGYGGRQEIADAVQSLLGEKIAEGLSGDELVQAVSVEEIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRRVDFLRALRDYAARHRRFGI
>CP032762.1|AYJ50903.1|5288086_5288752_+|hemolysin-III-family-protein
MTMFGLDELPVKPRMRGWIHLYAFGVAVVAGIVLVTLAFSMVSVGAGIATSVYAVTVCGVFGVSATYHRVHWDNPAHRTWMKRADHSMIFLFIAGSYTPFAVLGLPTDTGRTLLIVVWIGALGGVALKMLWPQAPKWVGVPLYLLLGWAIVPVAPTLIEQVGYAPFVLLLVGGILYSIGAILYATKWPNPWPTTFGHHEFFHAATVLAAICHLVAVWLVLF
>CP032762.1|AYJ50904.1|5288748_5290770_-|thioredoxin-domain-containing-protein
MLGSNALGESTSPYLRQHADNPVHWQQWTPEALQSARDRDVPILLSIGYSACHWCHVMAHESFEDEATAASMNANFVCIKVDREERPDLDAVYMNATVAMTGQGGWPMTCFLTPDGEPFYCGTYYPPRPRAGTPSFPQLLDAIADTWSTRRSEVFDASAAIMDALRSNSGKLPTSQRPVDADLLAEAVVGIRADEDVAHGGFGGAPKFPPGPLLEGLLRHHERTGSAAVLDTVQRAAAAMARGGIFDQIGGGFARYSVDAEWIVPHFEKMLYDNALLLRFYGHLARVTGDPLAIRVADETAAFMLRELRTDTGCFASALDADTEGVEGLTYAWTPAQLVDVLGFEDGVWAAGLFAVDSSGTFEAGMSVMQLPEDPDDIERFERVRATLMDARNRRPQPGRDDKVVTAWNGLAITALAEAGAGLGRSAWIDAAAECGEQIFVRHEENGRLRRASLGTHVGDATGVLEDYSCLAVASLALFQATGEIVWSERARRLLDAAVEHFADAEHPGSWFDTADDAEILVTRPRDPLDNATPSGASTITEALLVAEALAPVDVASRYGELAAAGLARSALVLERAPRSAGHWLAVAEASVRGPLQIAISTDGDSALLDAARRHAPGGTTILAGVVDSSPLLAGRPMIRNQAAAYVCRGFVCDVPVTTTDELVASMRRRPAD
>CP032762.1|AYJ50905.1|5290772_5291030_-|hypothetical-protein
MIVSLLAQGAPGPEFGKSSPIGLVIIVALLVGTALLIWSMNKQIKKLPETFEKEDPGPDQELDEGTDRGAVRENLRSTEPNTGES
>CP032762.1|AYJ50906.1|5291026_5291887_-|mycothiol-conjugate-amidase-Mca
MAVHAHPDDESSKGAATTARYAAEGNDVLIVTLTGGERGDILNPAMDIPGVRDRIQEVRREEMAEAARILGVRQTWLGYVDSGLPEGDPLPPLPEGCFALVPLEESTEALVKVIREFKPHVITTYDEKGGYPHPDHIRCHEVSVAAYEAAGDPEQFPDVGEPWTPLKLYYSHGFLRKRMQLFHDWFIDRGEESPFVDWLKRWTGDRDEIMERITTQVTVGDYFEQRDDALRAHATQIDPNGSFFAVPVEVQRKLWPTEEYELARTRVKTSIPETELFAGIEPERTE
>CP032762.1|AYJ50907.1|5292029_5292455_+|DUF4307-domain-containing-protein
MTATLPEGRYPASTTRPGVTRRTKNLLLVLVLVVGLGVAYFGYQRLSVQDVEGKALSFDILDDDTVTVGFSVTRADPGQEVVCIIRARSRDGSESGRREVLVPGSVDREVEVSSIITTSKPPAMADVYGCGTNVPEYLRAG
>CP032762.1|AYJ52168.1|5292725_5293220_+|transcription-elongation-factor-GreA
MTETQVTWLTQESHDRLKSELDQLISNRPVIAAEINERREEGDLKENGGYHAAREEQGQQEARIRQLQELLNSAKVGEAPTQSGVALPGSVVKVYYDGDESDTETFLIATREEGARDGKLEVYSPSSPLGGALIDAKVGDTREYSLPNGKTMKVTLLSAEPYHT

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Crispr_ID: CP032762_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032762_14

5843554-5843667

Orphan

Consensus_repeat	Method
GCTTGAATGGACCCCGCACGCTATCTGACCGTATGAATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032762_14

>merge|CP032762|14|5843554-5843667|CRISPRCasFinder
GCTTGAATGGACCCCGCACGCTATCTGACCGTATGAATGGACCATTCAAGCGATCGCGAGGCCGGCGGTCCCCCGCTTGAATGGACCCCGCACTCTATCTGACCGTATGAATGG

>CP032762|14|14|5843554-5843667|CRISPRCasFinder
GCTTGAATGGACCCCGCACGCTATCTGACCGTATGAATGG	ACCATTCAAGCGATCGCGAGGCCGGCGGTCCCCC
GCTTGAATGGACCCCGCACTCTATCTGACCGTATGAATGG

Protein	Signature genes	Signature genes Name	Protein_function
CP032762.1\|AYJ51365.1\|5833537_5834947_+\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
CP032762.1\|AYJ51376.1\|5850115_5850547_-\|aspartate-1-decarboxylase	unknown	unknown	gnl\|CDD\|376751
CP032762.1\|AYJ51367.1\|5837637_5838540_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
CP032762.1\|AYJ51379.1\|5854102_5854576_-\|DUF3180-domain-containing-protein	unknown	unknown	gnl\|CDD\|378650
CP032762.1\|AYJ51371.1\|5842223_5843525_+\|acetyl-esterase	unknown	unknown	gnl\|CDD\|367570
CP032762.1\|AYJ51370.1\|5840563_5842156_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
CP032762.1\|AYJ52244.1\|5836943_5837567_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239473
CP032762.1\|AYJ51366.1\|5836137_5836866_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378921
CP032762.1\|AYJ52245.1\|5838640_5839447_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP032762.1\|AYJ51368.1\|5839452_5840190_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP032762.1\|AYJ51374.1\|5848161_5848617_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|236337
CP032762.1\|AYJ51377.1\|5851527_5852496_-\|DUF2520-domain-containing-protein	unknown	unknown	gnl\|CDD\|227782
CP032762.1\|AYJ52246.1\|5848613_5849126_-\|cysteine-dioxygenase	unknown	unknown	gnl\|CDD\|380416
CP032762.1\|AYJ51369.1\|5840226_5840535_+\|mycobilin-forming-heme-oxygenase-MhuD	unknown	unknown	gnl\|CDD\|225209
CP032762.1\|AYJ51378.1\|5852630_5854004_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP032762.1\|AYJ51372.1\|5843772_5846310_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|214361
CP032762.1\|AYJ51373.1\|5846604_5848122_-\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP032762.1\|AYJ51375.1\|5849312_5850113_-\|type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|237347
CP032762.1\|AYJ51380.1\|5854572_5855091_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
CP032762.1\|AYJ52243.1\|5835039_5836137_+\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|237395

Protein	Function_ID	Function_description	E-value
CP032762.1\|AYJ51365.1\|5833537_5834947_+\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
CP032762.1\|AYJ51376.1\|5850115_5850547_-\|aspartate-1-decarboxylase	gnl\|CDD\|376751	pfam02261, Asp_decarbox, Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.	5.80009e-77
CP032762.1\|AYJ51367.1\|5837637_5838540_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.63633e-93
CP032762.1\|AYJ51379.1\|5854102_5854576_-\|DUF3180-domain-containing-protein	gnl\|CDD\|378650	pfam11377, DUF3180, Protein of unknown function (DUF3180). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.68716e-32
CP032762.1\|AYJ51371.1\|5842223_5843525_+\|acetyl-esterase	gnl\|CDD\|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	2.30816e-36
CP032762.1\|AYJ51370.1\|5840563_5842156_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.30774e-45
CP032762.1\|AYJ52244.1\|5836943_5837567_-\|carbonic-anhydrase	gnl\|CDD\|239473	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.44897e-72
CP032762.1\|AYJ51366.1\|5836137_5836866_-\|hypothetical-protein	gnl\|CDD\|378921	pfam12690, BsuPI, Intracellular proteinase inhibitor. This is a bacterial domain which has been named BsuPI in Bacillus subtilis. This domain is found in Bacillus subtilis ipi, where it has been suggested to regulate the major intracellular proteinase (ISP-1) activity in vivo. The structure of proteins in this family adopt a beta barrel topology.	0.000135366
CP032762.1\|AYJ52245.1\|5838640_5839447_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.28681e-30
CP032762.1\|AYJ51368.1\|5839452_5840190_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.37083e-29
CP032762.1\|AYJ51374.1\|5848161_5848617_-\|sulfurtransferase	gnl\|CDD\|236337	PRK08762, PRK08762, molybdopterin-synthase adenylyltransferase MoeB.	9.97251e-16
CP032762.1\|AYJ51377.1\|5851527_5852496_-\|DUF2520-domain-containing-protein	gnl\|CDD\|227782	COG5495, COG5495, Uncharacterized conserved protein [Function unknown].	1.17525e-64
CP032762.1\|AYJ52246.1\|5848613_5849126_-\|cysteine-dioxygenase	gnl\|CDD\|380416	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain. This family contains cysteine dioxygenase (CDO; EC 1.13.11.20), which catalyzes the conversion of cysteine to cysteine sulfinic acid, the first step in the biosynthesis of essential oxidized cysteine metabolites such as sulfate, hypotaurine, and taurine. CDO also plays an important role in the regulation of intracellular cysteine levels in mammals; CDO expression is altered in cancer cells, and abnormal or deficient CDO activity has been linked to Parkinson's disease, Alzheimer's disease, and rheumatoid arthritis. CDO is an iron-dependent thiol dioxygenase that uses molecular oxygen to oxidize the sulfhydryl group of cysteine to generate cysteine sulfinic acid. The CDO active site contains an amino acid-derived cofactor. These enzymes are found in prokaryotes as well as eukaryotes and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	8.4444e-17
CP032762.1\|AYJ51369.1\|5840226_5840535_+\|mycobilin-forming-heme-oxygenase-MhuD	gnl\|CDD\|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	8.29862e-26
CP032762.1\|AYJ51378.1\|5852630_5854004_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.60624e-07
CP032762.1\|AYJ51372.1\|5843772_5846310_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
CP032762.1\|AYJ51373.1\|5846604_5848122_-\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP032762.1\|AYJ51375.1\|5849312_5850113_-\|type-III-pantothenate-kinase	gnl\|CDD\|237347	PRK13318, PRK13318, type III pantothenate kinase.	4.30031e-131
CP032762.1\|AYJ51380.1\|5854572_5855091_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	6.38101e-46
CP032762.1\|AYJ52243.1\|5835039_5836137_+\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|237395	PRK13482, PRK13482, DNA integrity scanning protein DisA; Provisional.	0

>CP032762.1|AYJ51371.1|5842223_5843525_+|acetyl-esterase
MVHRYERIATRVHASDAHRYRESRSDRSLRWRTSRSRSSLTAVTAFRFAVVAALAVTALAAAPATAQPLAEFYSTPVIDAGAHAGGDIVRRSHVGPPLGEGLGVDIERILYTSTDTHGDPMVVSGYTMTPQAPWPGPGPRPVIAYAPGTSGMADRCAGSAVLGTIGSSPAVLPLLLAGYAVAATDYRGLGTPGGHTYLNRLDAGHALLDVARAGVGNTGAPVVLFGYSEGGHAAGSAAELESSYAPELDIRGSYVGAPPADPSLNVDNLDNSSLAPALLYAVDGLVNAYPESADAILRQFNPAGRELLDASQNWCSTDPAANRAFRSADITSDGRSLGENLKDEPAASLIALNAVGYGRPSAPVLLSQSMSDDTVPVQQSRTLRDRWTAAGFTDLTYIEYPIPSVPVPGANHAPGGLIAYADVMPFIARVLAS
>CP032762.1|AYJ51370.1|5840563_5842156_-|MFS-transporter
MTTASKTPARAGLVLFVLILVAAVANLNLAVANVALPEIGRDFDASQTQLNLIAVAYSLGLAGSVLYLGALGDRYGRKLLLVLGMALSIPACVIASIAPNFEVLFGARLLGGLSAGLAYPTTLALITALWSGTARTKAIALWSALGGALSALGPLLSGALLEKFHWGSVFIATLPLAFLALVLAVVFVPAHVNETSDPVDNLGGMVSVVFIAALVLSINFAPVDGMGTLAIGLGAIAVAAGAVFVFRQSRAKFPLYDLRIARRRTFWAAGLAGIIVFGSLMGVIFVGQQFLQNVLEYSTLAAGASTLPAALAMVIVAPQSAKLVESRGSRFTLLLGYLFIVAGLVVAWATWKEGVSYGFIAASYALLGIGVGFAGTPASRSLTGSVPVDRAGMASGTADLQRDLGGAIMQSTLGALLTAGYAASLTSQIADSPQAGTISDETQAVLTKSFSSAADLAERYPQYGEQIITAARQAFEDGDQKSYAAAILVVVVGAVIVSFAYPKHDEEKRLLAHYSSEDREPIDTASPENG
>CP032762.1|AYJ51369.1|5840226_5840535_+|mycobilin-forming-heme-oxygenase-MhuD
MAVVKINAIEVPAGAGPELEKRFAARASAVEGSAGFLGFQLLRPVKGEDRYFVVTQWETEEAFQAWAAGPAKAAHSGERAKPVASGASLLEFEVVLDVPAKS
>CP032762.1|AYJ51368.1|5839452_5840190_-|alpha/beta-hydrolase
MLHDEGGDGDPILLLHGLMGSARTWRRQIPWLRRYGHVYTYDAPGHGRPPPAALTTEAFVEDLSVHAEEIGRATVVGHSMGSLHGWCLAAARPELVAALVVEDIAPDFRGRTADAWAAMIESWPQPFPTEVAVREYFGDVAGQYFLDSFERRPDGWYLHGDVATFEAISSEWGTRHFWAEWESVDVPSLLVEGEFGITPKGQMEEMSRRNPKSEYVSVPGAAHLIHDERPEEYREVVTAFLRRLR
>CP032762.1|AYJ52245.1|5838640_5839447_-|alpha/beta-hydrolase
MPTAKINGIDINYDVKGTGPLVVLVMGTGSPGRVWQAHQVPALVNAGFQVVTFDNRGISPSFEPGRGMVLDDLVADTAALIEHLGGMRARVVGTSMGSRVTQELALARPDLVSHAVMMATYGRVSPMQKAWFQGERDLYDAGITLPDSYRAAMTAMNNFSPATLRDEKVIGDWLAVLEFSGGKRTAGTRAQIGLEMRAGSERLTAYRKITAKSLVVGFADDRLIPVHLSREVAQAIPGARYEEVADTGHFGYLERPEVVNKILVDFLR
>CP032762.1|AYJ51367.1|5837637_5838540_+|A/G-specific-adenine-glycosylase
MPIDTAALLGWFDSEERDLPWRRPGVTGWQILMSEIMLQQTPVSRVAPIWEQWVQRWPVPSAMAASSQAEVLRAWGKLGYPRRALRLHECAGVLASEHGDVVPQDVETLLGLPGIGAYTARAVACFAYGQRVPVVDTNVRRVVARAVHGAAEPGNPSTTRDLADTLALLPRTRAKAARYSAALMELGALICTAKNPACLLCPLPECSWIEAGRPAYEGPAKKVQKFAGTDRQVRGKLMSVLRDSHGPVERARLDVVWLTDPGQRDRALHSLLLDGLVEQTEDGMFALAGEGDAASPPVRA
>CP032762.1|AYJ52244.1|5836943_5837567_-|carbonic-anhydrase
MPATNPVTAWKSLKDGNQRFVAGEPLHPSQGIEDRTRLAEGQHPGAILFGCADSRVAAEIIFDQGLGDMFVVRTAGHTMDSSVLGSIEYGVAVLGAPLIVVLGHDRCGAVKATIDALDSGDTPGGYIRDVVERVTPSVLSARRDGYTAVDDFEARHVEETANLLMQRSRIIADKVETGEVAIVGLTYRLSEGSARLREVIGDIGELP
>CP032762.1|AYJ51366.1|5836137_5836866_-|hypothetical-protein
MLEPTGPLPPEIYWRRRALAIGAAVVVLGLIVWFIASLGGGGDENQQAEPAGVVSSASPTTTAPTTTSSQALGAASEGGSGGSGGSGGSSGAAASGGSGSSSAPASGAPVAANQCPDQSLAIKATPDKATYRVGEEPGFTVVITNISSTECQRDVGAGLQQALVYTLDDQRIWSNTDCFPDAQSDLRTFKPGEQAGFTVKWSGTNSVPGCEAERIPVGAGSYKVIAQLGELRSSPEPFNITT
>CP032762.1|AYJ52243.1|5835039_5836137_+|DNA-integrity-scanning-protein-DisA
MDDSTRGEPSSAALRETIARLAPGTALRDGLERILRGRTGGLIVLGYDDEVEAICDGGFELDVEFAPTRLRELSKMDGAVVLSTDGTRIVRSNVQLVPDHKIPTVESGTRHRAAERTAMQTGYPVVSVSQSMSIVSVYVAGVRHVVEGSATIQSRANQAVATLERYKARLDETTRQLSVVEIEDFVTLRDALTVAQRLEMVRRVSVEIEQNVLELGTDGRQLALQLEELLGDNDVDRQLVVRDYLAGTEPAGTAAVERALGALDKLTDVDLLDLTTLARAFGYPSTIEALDTPMSPRGYRVLTRVPRLQFSQIHRLVASFGTLQVLLAATAADLQSVDGIGGLWARHIREGLSRLAESSIAGPFD
>CP032762.1|AYJ51365.1|5833537_5834947_+|DNA-repair-protein-RadA
MAKLKTNYRCSACQHTVAKWVGRCPECGSWGSMDEAPVLAPVASRAGASGLGAGNTRSPMAAMVPTTPATAITQVSSTSSQANSTGISEFDRVLGGGLVPGSVVLLAGEPGVGKSTLLLEVVHRWARTGEDRRALYVTGEESAGQVRLRADRTGAVHERVYLAAESDLATVFGHVEQVKPSLLIVDSVQTMLAADVDGVIGGVTQVRAITSALTSLAKTTGVAVLLIGHVTKDGAVAGPRSLEHLVDVVLHFEGDKHTTLRMIRGVKNRFGASDEVGCFELRDTGIEGISDPSGLFLHHRTDSVPGTAVTVTMDGKRPLLAELQALVVDTHMPSPRRAVSGLDSARVAMILAVLERRCGVKVAKTEVYAATVGGMKTSEPAADLALAAAVASAVTDVPLPPGFVILGEVGLAGEVRRVSGLGRRLAEAARLGFTHAITPEHEDAIPAGMKVKTVTNLGDALNSLRTRSR
>CP032762.1|AYJ51372.1|5843772_5846310_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPSESGSSRGEAGTPSTSLVLDQFGRNLTQAALEGKLDPVIGRAKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDDKIADARREKESAIDAQDFEKAANLRDKEKQLVQQRAEREKQWRSGDLDVIAEVDDEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQVEAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSSGEGTGSNYERMKLKVNDELKKHFRPEFLNRIDDIVVFHQLTKDEIIQMVDLMLNRVEGALKNKDMAIEVTEKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIEAGQIILVDVENWDGEGQGEDAKFTFRGEKKAIIVPDEVPVDLAKASGDDGE
>CP032762.1|AYJ51373.1|5846604_5848122_-|lysine--tRNA-ligase
MTDAAAPTTDDTPEQLRIRRAKRDRLLEQGREAYPVSVPRTHSLRQVRDLFPSLEADTTTGQLVGVAGRVIFVRNTGKLCFATLQEGDGTQLQAMISLAGVGEDALAAWKSDVDLGDFVFVHGEVISSRRGELSVMADAWQIASKALRPLPVAHKELNEETRIRQRYLDLITRPEAREVARKRVAVVRELRAALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDTDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEGADSSHSPEFAMLETYEAYGTYDDSATMTRELIQEVAQAALGSQIVLLPDGTTYDLSGEWTTLEMYPSLSEAIGVDVTPETSVEELLSLAEKVGLDVPRKDGKPIYGHGKLVEELWEHQVGDDLFAPTFVRDFPVETSPLTRQHRSKPGITEKWDLYIRGFELATGYSELVDPVIQRERFEDQARQAAAGDDEAMVLDEDFLAAMEQGMPPTTGTGMGIDRLLMTLTGLGIRETILFPIVKPQL
>CP032762.1|AYJ51374.1|5848161_5848617_-|sulfurtransferase
MTTAAPVGPTRRTIVELLEEARTKIQRMTVFELRDAVARGAIVVDIRPQAQRAIEGTLPGALAIERNVLEWRLDPTSDARLAAAVDHGVEWIVICSEGYTSSLAAASLQELGLSKATDLVGGYQALKSAGLLGVLTKAQHCVREAEAVTAH
>CP032762.1|AYJ52246.1|5848613_5849126_-|cysteine-dioxygenase
MRPHDLLRITDQGASEVLEGRFDHLLPDGGAWPTDERWSTRLHTDDDLDVWLISWVPDRSTELHDHAGSLGALTVLSGSLVEHRWAGVGLKRRRLEAGDQASFPLGWVHDVMRAPASIAPAPADELLTPTLSVHAYSPPLTAMSYYEVTDKSSLRRTRTELTDEPEGPSK
>CP032762.1|AYJ51375.1|5849312_5850113_-|type-III-pantothenate-kinase
MLLAVDIRNTSTTLGLFSGSGDHAKLLRDWRMRTDPRVTADELALMLRGLIGNDVEQITGVSALSTVPSILRETRTMLGRYWNHVPHVVVEPGVRTGVPLLVDNPKEVGADRIVNTLAAHDLYGSACIVVDFGTTTCVDVVSAKGEFLGGAIAPGLEVSAAAMSSRSAALREVELLRPRSVVGKNTVECMQAGAVFGFAGLVDGLVGRVRRELPEFSGTDVAVIGTGDSAPLIMAESSAIEHHEPDLTLEGLRLVFERNQAKRRVR
>CP032762.1|AYJ51376.1|5850115_5850547_-|aspartate-1-decarboxylase
MFRTMMKSKIHRATVTHADLHYVGSVTVDQDLMDAADLLEGEQVTIVDIDNGARLETYVITGERGSGVIGINGAAAHLVNPGDLVILIAYGVMNEQECKDYAPRVVFVDEKNAPVDLGTDPAHAPEGSGLITPRTLRADSVLV
>CP032762.1|AYJ51377.1|5851527_5852496_-|DUF2520-domain-containing-protein
MTSSEFTADPAPARLTVGIVSAGRVGTALGEALERVGHLVVGCSAVSEDSRHRAATRLPDSQILPIDEVATRAELLVLSVPDYELASLASGLAATGVIAPGKLVVHTSGANGIGVLAPLTALGAIPLAIHPAMTFTGHSEDTDRLASACFGITASDEIGYAVAQALVLELGGEPVHVAEANRALYHAALAHGSNHLVTLIADAVDALRVALDGPGFPGIDPEPDIYAEPGSERIARSEPGNALAQRVLAPLVTAALENVLRSGQSALTGPVARGDLGAVRKHLEVLTAVDPRIAAGYRALSLRSAQRVDAGAELVEFLEGEQ
>CP032762.1|AYJ51378.1|5852630_5854004_-|hypothetical-protein
MTEPTRAKAARRSRRSASQVFIAALVVFGIAASVLLLFSENIQWLRVGLVSALWAAIVGAFAMTKYRRESVADQTKAKDLQTVYELQLAREISARREYELGVEARVRSEVQIETSEVAALRAELAHLRNNLQMLFDGNLPTERVALRAEATRMQELGGGRNYDSYQPAPSGLYIPGRQGVPGTNGAEHGPVAAPQAADDPTPAGSVPGLATPYDEPVTAETSILFPDTPIGTEPPRGYGPDSGRVPPSRRPEPRVPGGGRRVPTPPRASGPSQDSNFPAYAGTSSVGDPEPFVAAQAYVESAGPVNDFDAPPAASYQEAVPEPGADDHVAPVPVEPSTSSDTWGGYLPEPEPEAVQSQGGWSNLDNAAVPDSHDPQPVADPQPVADPQPVVDQESTDASSGNWDLPEPTPRRRRRAQPDSPENSGAHSNGRSVAEIMAGLQSGDSEPSERRHRRRAD
>CP032762.1|AYJ51379.1|5854102_5854576_-|DUF3180-domain-containing-protein
MNEVKPTRAWDLLGIGVVAAVATWLLVRSFYGSLPPISVVAGGSLYPIALGEMILAFVVRSRIGGSRIGDGPQQLHPITAARAVALAKASALVGAAVTGAWVGFLLHVLPQAATVRAAADDRAGAVIGLVAALALVGAALWLEHCCRTPKDGSDDRR
>CP032762.1|AYJ51380.1|5854572_5855091_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MSRAVLSIGSNVGDSLAHLRSVAEALGSRLVAASPVYSSAPWGGVEQQDFLNAVVVAEDADRGPYEWLEFAREREAAAERVRVVRWGPRSLDVDIVVCRDPEDIVNRDESLLLPHPRAHERAFVLVPWLDVEPDATLRVGDDVEPTATWLGALPESERDSVRRTDMTLDTSA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032762_8	8.1\|1376754\|30\|CP032762\|CRISPRCasFinder	1376754-1376783	30	NZ_LR536452	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3	70131-70160	5	0.833
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019459	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence	3489-3517	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019459	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence	19089-19117	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019459	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence	34689-34717	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019461	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed4, complete sequence	10981-11009	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019462	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed5, complete sequence	10973-11001	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019463	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed6, complete sequence	10591-10619	6	0.793
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP019464	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed7, complete sequence	13740-13768	6	0.793
CP032762_8	8.1\|1376754\|30\|CP032762\|CRISPRCasFinder	1376754-1376783	30	NZ_CP014769	Hymenobacter sp. PAMC 26554 plasmid unnamed1, complete sequence	56247-56276	7	0.767
CP032762_9	9.1\|1498185\|29\|CP032762\|CRISPRCasFinder	1498185-1498213	29	NZ_CP011275	Planctomyces sp. SH-PL62 plasmid pPL62-2, complete sequence	69038-69066	7	0.759
CP032762_14	14.1\|5843594\|34\|CP032762\|CRISPRCasFinder	5843594-5843627	34	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	281910-281943	10	0.706

1. spacer 8.1|1376754|30|CP032762|CRISPRCasFinder matches to NZ_LR536452 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3) position: , mismatch: 5, identity: 0.833

cattg-ccgcctccgttgccccaccccgccg	CRISPR spacer
-attgcccgcctcctttgccccgccccgcgc	Protospacer
 **** ******** *******.******

2. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

3. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

4. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

5. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019461 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

6. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019462 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

7. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019463 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

8. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP019464 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed7, complete sequence) position: , mismatch: 6, identity: 0.793

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
tgcgcagttccacggccgtgagcgagtcg	Protospacer
.* **** ****************.** .

9. spacer 8.1|1376754|30|CP032762|CRISPRCasFinder matches to NZ_CP014769 (Hymenobacter sp. PAMC 26554 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cattgccgcctccgttgccccaccccgccg	CRISPR spacer
cgctgcctcctccgttgcccctccccaaca	Protospacer
*..**** ************* ****. *.

10. spacer 9.1|1498185|29|CP032762|CRISPRCasFinder matches to NZ_CP011275 (Planctomyces sp. SH-PL62 plasmid pPL62-2, complete sequence) position: , mismatch: 7, identity: 0.759

cgagcaggtccacggccgtgagcgggtaa	CRISPR spacer
cccccaggtccacggccgtcagcaggtcg	Protospacer
*   *************** ***.*** .

11. spacer 14.1|5843594|34|CP032762|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.706

accattcaagcgatcgcgaggccggcggtccccc	CRISPR spacer
cgcggtggcgcgagcgcgaggccggcggtcgccg	Protospacer
  *. * . **** **************** **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3130111 : 3137742

Bacillus_virus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYJ49331.1\|3130111_3130957_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	3.9e-80	56.6
AYJ49332.1\|3130995_3131760_+	fructosamine kinase	NA	NA	NA	NA
AYJ51838.1\|3131756_3132350_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYJ49333.1\|3132452_3133019_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.1e-05	26.0
AYJ49334.1\|3133092_3133215_+	50S ribosomal protein L36	NA	NA	NA	NA
AYJ49335.1\|3133771_3134005_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	2.3e-22	64.9
AYJ51839.1\|3134064_3134493_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	Q4Z9B0	Staphylococcus_phage	5.3e-09	30.4
AYJ49336.1\|3134529_3136692_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	3.7e-207	50.8
AYJ49337.1\|3136740_3137742_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0N7CCA3	Skermania_phage	7.7e-152	83.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032762

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection