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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032862 Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence 1 crisprs NA 0 1 0 0
CP032861 Bacillus subtilis subsp. subtilis strain N1-1 chromosome, complete genome 0 crisprs DinG,cas3,csa3,WYL,DEDDh 0 0 13 0

Results visualization

1. CP032862
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032862_1 1815-1983 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP018185 Bacillus subtilis strain KH2 plasmid, complete sequence 60755-60813 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP017764 Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence 37952-38010 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP032868 Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence 33414-33472 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP032864 Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence 47417-47475 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP032866 Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence 31651-31709 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP021893 Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence 5175-5233 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP021893 Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence 71103-71161 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP041370 Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence 57654-57712 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP020024 Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence 20251-20309 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP020024 Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence 84850-84908 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP032862 Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence 1870-1928 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NC_015148 Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335 60682-60740 0 1.0
CP032862_1 1.1|1870|59|CP032862|CRISPRCasFinder 1870-1928 59 NZ_CP014473 Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence 60682-60740 0 1.0

1. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP018185 (Bacillus subtilis strain KH2 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

2. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP017764 (Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

3. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP032868 (Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

4. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP032864 (Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

5. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP032866 (Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

6. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP021893 (Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

7. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP021893 (Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

8. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP041370 (Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

9. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP020024 (Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

10. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP020024 (Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

11. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP032862 (Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

12. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NC_015148 (Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

13. spacer 1.1|1870|59|CP032862|CRISPRCasFinder matches to NZ_CP014473 (Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP032861
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 309922 : 316017 8 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_2 528452 : 539142 10 Bacillus_phage(75.0%) transposase,holin NA
DBSCAN-SWA_3 632197 : 708243 86 Bacillus_phage(54.35%) head,portal,plate,tail,holin,terminase,integrase,protease,coat,capsid,transposase attL 665786:665801|attR 709632:709647
DBSCAN-SWA_4 712943 : 719515 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_5 1130869 : 1204495 81 uncultured_Caudovirales_phage(24.39%) terminase,portal,plate,holin,tail,protease,tRNA,transposase NA
DBSCAN-SWA_6 1239204 : 1288745 54 Bacillus_phage(55.56%) tRNA,coat,transposase NA
DBSCAN-SWA_7 1831352 : 1839718 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_8 2562263 : 2669666 103 Bacillus_phage(28.0%) holin,protease,bacteriocin,transposase NA
DBSCAN-SWA_9 2816565 : 2931123 113 Bacillus_phage(23.53%) bacteriocin,holin,lysis,protease,tRNA,coat NA
DBSCAN-SWA_10 3051418 : 3117745 54 Bacillus_phage(18.18%) holin,protease,coat,transposase NA
DBSCAN-SWA_11 3225829 : 3263411 48 Bacillus_phage(30.77%) portal,plate,tail,integrase,holin,protease,capsid attL 3226722:3226775|attR 3263550:3263603
DBSCAN-SWA_12 3343195 : 3400961 68 Bacillus_phage(68.29%) head,terminase,portal,tail,holin,protease,capsid,transposase NA
DBSCAN-SWA_13 3966889 : 4023997 47 Staphylococcus_phage(20.0%) integrase,tRNA,protease,coat,transposase attL 3966565:3966619|attR 3977965:3978019
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage