CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP024675	Citrobacter werkmanii strain UMH18 chromosome, complete genome	1 crisprs	WYL,DinG,cas3,csa3,DEDDh	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP024675_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024675_1

1538645-1538768

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024675_1

>merge|CP024675|1|1538645-1538768|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAATATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP024675|1|1|1538645-1538768|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAATATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024675.1\|AYL65925.1\|1536794_1538402_-\|FAD/NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182134
CP024675.1\|AYL65923.1\|1535328_1536081_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP024675.1\|AYL65930.1\|1545595_1546090_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|226429
CP024675.1\|AYL65921.1\|1533285_1534341_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
CP024675.1\|AYL65934.1\|1548873_1549182_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
CP024675.1\|AYL65916.1\|1526561_1527035_+\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|377824
CP024675.1\|AYL65929.1\|1543649_1545578_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
CP024675.1\|AYL65926.1\|1539177_1540182_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183400
CP024675.1\|AYL65917.1\|1527117_1529010_+\|spermidine-dehydrogenase	unknown	unknown	gnl\|CDD\|379192
CP024675.1\|AYL65935.1\|1549221_1550013_-\|isomerase	unknown	unknown	gnl\|CDD\|223461
CP024675.1\|AYL65920.1\|1531846_1533109_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|182078
CP024675.1\|AYL65927.1\|1540400_1542185_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143635
CP024675.1\|AYL65931.1\|1546490_1547132_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|377981
CP024675.1\|AYL65924.1\|1536067_1536790_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270259
CP024675.1\|AYL65928.1\|1542303_1543413_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
CP024675.1\|AYL65922.1\|1534327_1535332_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP024675.1\|AYL65932.1\|1547256_1548225_-\|threonine/serine-dehydratase	unknown	unknown	gnl\|CDD\|235918
CP024675.1\|AYL65918.1\|1529013_1530222_+\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|379187
CP024675.1\|AYL65919.1\|1530264_1531740_-\|decarboxylase	unknown	unknown	gnl\|CDD\|224089
CP024675.1\|AYL65933.1\|1548252_1548648_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|223329

Protein	Function_ID	Function_description	E-value
CP024675.1\|AYL65925.1\|1536794_1538402_-\|FAD/NAD(P)-binding-domain-containing-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
CP024675.1\|AYL65923.1\|1535328_1536081_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.34462e-81
CP024675.1\|AYL65930.1\|1545595_1546090_-\|oxidoreductase	gnl\|CDD\|226429	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown].	8.91164e-53
CP024675.1\|AYL65921.1\|1533285_1534341_+\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	9.52168e-83
CP024675.1\|AYL65934.1\|1548873_1549182_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	3.07741e-60
CP024675.1\|AYL65916.1\|1526561_1527035_+\|polyketide-cyclase	gnl\|CDD\|377824	pfam07366, SnoaL, SnoaL-like polyketide cyclase. This family includes SnoaL a polyketide cyclase involved in nogalamycin biosynthesis. This family was formerly known as DUF1486. The proteins in this family adopt a distorted alpha-beta barrel fold. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalyzing intramolecular aldol condensation.	1.1173e-18
CP024675.1\|AYL65929.1\|1543649_1545578_-\|GGDEF-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.55972e-107
CP024675.1\|AYL65926.1\|1539177_1540182_-\|tryptophan--tRNA-ligase	gnl\|CDD\|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
CP024675.1\|AYL65917.1\|1527117_1529010_+\|spermidine-dehydrogenase	gnl\|CDD\|379192	pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain.	6.13917e-07
CP024675.1\|AYL65935.1\|1549221_1550013_-\|isomerase	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	4.62796e-63
CP024675.1\|AYL65920.1\|1531846_1533109_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|182078	PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.	0
CP024675.1\|AYL65927.1\|1540400_1542185_-\|hypothetical-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.25691e-56
CP024675.1\|AYL65931.1\|1546490_1547132_-\|transcriptional-regulator	gnl\|CDD\|377981	pfam08348, PAS_6, YheO-like PAS domain. This family contains various hypothetical bacterial proteins that are similar to the E. coli protein YheO. Their function is unknown, but are likely to be involved in signalling based on the presence of this PAS domain.	2.48667e-46
CP024675.1\|AYL65924.1\|1536067_1536790_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270259	cd13541, PBP2_ModA_like_2, Substrate binding domain of molybdate-binding proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.10674e-84
CP024675.1\|AYL65928.1\|1542303_1543413_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	4.37364e-40
CP024675.1\|AYL65922.1\|1534327_1535332_+\|ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	2.00936e-85
CP024675.1\|AYL65932.1\|1547256_1548225_-\|threonine/serine-dehydratase	gnl\|CDD\|235918	PRK07048, PRK07048, threo-3-hydroxy-L-aspartate ammonia-lyase.	0
CP024675.1\|AYL65918.1\|1529013_1530222_+\|alcohol-dehydrogenase	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	7.32235e-10
CP024675.1\|AYL65919.1\|1530264_1531740_-\|decarboxylase	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.44764e-137
CP024675.1\|AYL65933.1\|1548252_1548648_-\|RidA-family-protein	gnl\|CDD\|223329	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis].	1.84136e-39

>CP024675.1|AYL65925.1|1536794_1538402_-|FAD/NAD(P)-binding-domain-containing-protein
MNKIAIVGTGPTGIYTLLALLKHQTPLSISLYEQSNEAGVGMPYSDEENSRLMLANIASIEIPPITSSYLDWLRQQSVEHLARYGVKHASLHDRQFLPRILLGEYFRDQFLRLVDLADKQGFNITVHESCQVKDVKATTDGVVICSDHNDPEHFDLAVIATGHVWPDAQSASRTFFPSPWTGLMEAKIPACNVGILGTSLSAIDAAMAVVAQHGRFVLDDAQGVHFERNEGSQDLNILLMSRSGILPEADFYCPLPYEPLSIVTAEALEQCIAVGSAGLLDRIFMLIVKEIELADPVWSKEVALSSLNADSFTDVWFAARKKHDPFHWAAANLEEVERNKREKHTVAWRYAILRLHEAVQEIVPWLDEKDRERFNNGLARVFIDNYAAIPSQSIRRLLALREAGILNIRALGQDYQLEQKEKMTVIRAQGETYKFDVFIDARGQKALKIKDLPFPSLRDQLQSTSEEIPDVGDDYTLQAPDIVRGRIALAALPWLMHDQPFVQGLTACAEIGQCVAQAISRPATRLRRRLPYYEA
>CP024675.1|AYL65924.1|1536067_1536790_-|molybdate-ABC-transporter-substrate-binding-protein
MSSSITLLAAGSLRPALTPLITHFTHISGIDVKVEYGPAGLLRERIEAGEPCALFASASQEHPQRLLAQHKALSTHTFCWNQLGLVTNRTGEWLDLLRNPTLRIGTSTPGCDPSGDYTWAFFDKMDALERGLGQQLRERAIPLVGGRDTVRIPQGELASAWVLRQGLADLFIGYAHYAKTLRTLPNVRYVAIPAEYNIQCEYQLALLEASKDALALVEFMLGNGGQEFLIAAGFIPLTDE
>CP024675.1|AYL65923.1|1535328_1536081_+|ABC-transporter-ATP-binding-protein
MKSVALRVNRLTYGYRAPLFEPLTFSCRKGEVWAVLGRNGLGKSTLLDTLTGTLPALGGSIENAGGIGIVAQHCHLPFPYTVSDVVLMGRAQHVKLFAQPSQQDQKRAAQALEQLNIAHLGACSFGSLSGGQQQLVMIARALVTECQTLLLDEPCSALDLANQQVVLQLISDLARQQGCSVLFSTHDPLHALQIATHTLLLLPEGKWRAGPTDSIVTEDNLSQAYGLPLRKVNVDHYQTPFIAPLFSIRR
>CP024675.1|AYL65922.1|1534327_1535332_+|ABC-transporter-permease
MQLSNRILPQQPLLMAAVLLLGVSSLCLGQYPLSLSEVFYHLTHYSDAEGIASQIVWTVRLPRILIALLAGGALGLCGATLQGVFHNPLVDPHIIGVTSGAAFGGTLAILLGLSPWLMMGSTFFFGLTALILVYAIATLQGLENTLVLILSGIILSGFFAALVSLIQYQADTEETLPNIVFWLLGSFATANWHKVLLLAIPVGIAATVLYQLRWRINLLSLNDKDARALGVAVVPLRRSVLVCCAFLVAAQVAVSGSIAWVGLVIPHLARLLVGVDHRRLLPCAFWLGGGFMIVVDDIARTLMPAEIPLGIITALFGAPLFAFLLIRNSRRRKQ
>CP024675.1|AYL65921.1|1533285_1534341_+|hypothetical-protein
MLTLRSFVLVCASFLVAFSAQAERTITDQLGRQITIPDHVDKVVVLQHQTLNILVQLNAQQDIVGVMSSWKKQLGPEFARFMPKITTLPTPGDLTSVNIESLLAIHPQVVFVANYAPAEMIQQIQNAGIPVVAISLRQDADGQQNKMNPTMADEEQVYNEGLKQGIRLIADVVGRKAQAETLIDYVFAARAKFNAPVANIPDAQKVRIYMANPDLMTYGSGKYTGLMMQHAGGLNVAAASVKGARQVALEQVLAWNPQVIFVQDRYPQVVTEIQNDPNWQGIDAVKNHRIWLMPEYAKAWGYPMPEALAIGELWMAKKLYPDAYKDVDVDAQAQDYYQRFYRVNWQSDAAK
>CP024675.1|AYL65920.1|1531846_1533109_+|4-aminobutyrate--2-oxoglutarate-transaminase
MNNKNLQQRRLDATPRGVGVMCDFYAQSAENSTITDIEGNQYIDFAAGIAVLNTGHRHPRLVQAVEAQLQAFTHTAYQIVPYESYVSLAEKINAVAPIDGKRKTTFFTTGAEAVENAVKIARAHTGRPGVIAFGGGFHGRTYMTMALTGKVAPYKKGFGPFPGSVYHAPYPSELQGVSTADSLKAIERLFKADIDPTQVAAIIFEPVQGEGGFVVAPSEFVAGIRRICDEHGIVMIADEVQSGFARTGKLFAMDHYADKADLMTMAKSLAGGMPLSGVVGKAEIMDAPAPGGLGGTYAGNPLSIAAAHAVLDIIRDEQLCQRAAALGEQLRATLTDAQGWCPELAEVRGLGSMVAAEFCDAATGEPSAAVAHRVQKKALEQGLLLLTCGQYGNVIRFLYPLTIPQDQFAKALDIIKAATK
>CP024675.1|AYL65919.1|1530264_1531740_-|decarboxylase
MRSLAGDVIKQAFSQQTDEKLHRRLYAAICSCILEGSLKPATRMPPSRDLAGELTLSRNTVLRVYEQLQAEGYISARTSSGTFVSDSVLDNLDLRPNKEPVAVALEDHTRLSARCLELLGHASASPRQWGAFIPGVPDVQHFPHRVLKKIQDRLARRLRPAFLTYDAAGGVSELKEALADYLRTARGVRCSPDQILITEGIHQALDLVTRALCNPGDSAWIEEPGYWGIKNILRINAVHFSAIPVDEQGMIPPGPTEPAPKLIFVTPSHQYPLGSVMSLSRRQQLLLRARETRSWIIEDDYDSEFRFSGQPIPSLQGLEEETPVIYIGTFSKTLYPALRLGYVVLPKPLAAPLKKVHNDLYRGGHLLIQAALAEFIREGYYAAHIRKMRQLYSRRRQMLVELITRQLGEQYLGSFSSNAGLHMILQLPAGSDDVAIARQANAQDLLVRPLSRYYVNEEKCSGLLLGFASIEEHEMAAAFTRLATIIRENAV
>CP024675.1|AYL65918.1|1529013_1530222_+|alcohol-dehydrogenase
MRNVTVLAACLFTATVSAAETHGEYIARISDCVACHTTEGGAAMAGGKKFPTPLGDIYSTNITPDKTQGIGSYAYEDFEKAVRQGIAKDGHPLYPAMPYPSYAKLSDEDVQALYRYFMHDVTPSAQPNKENAIPWLLSARWPLHIWNWLFTDAPETAVASAKTDENAVLLKRGAYLVEGPGHCGSCHTPRGVAMNEKAYSNADPEYLSGAMIDGWYAPSLRGTGMSESELKSLLLTGKSKHAAVSGSMAEVVTQSTQYLTDEDATAIAQYLLSLKSTKPEAGRTAGTTTSWSNSAEAGKVTYNRYCSTCHGLEGKGTDDNAPSLIRNPLVMVDDPTPLYRVIAYGAETPTTQGSVSFKMPAYGGMLTDSEMRDVINYVRKSWGEGNGEVSQEDLAGVKKASH
>CP024675.1|AYL65917.1|1527117_1529010_+|spermidine-dehydrogenase
MAITRRDFLNGVAVTVAAGLTPLEWVRAAGKENAFIDGSYYPPALTGLRGNHPGSFEMAHAVGREHKHFDLNTLPIEEEYDLVIVGGGISGLAAGCFWRQLAGQNSRILILDNHDDFGGHAKRNEFTSSGKKLLGYGGSEAFQSPAHNFSPEVQKLMETVGVSVTRLKESFDVNFYPDWQLSRGVFFDKKNFGETKIVSGDPGRAVSDDIPPDRLNGRKIEDFINDFPLSENDRKALTDLHVRPADYLPGMTIDEKTEWLDTHSYSEFLATKVGLSKMALLYFQQRSNDFFAIGIEGISCSDARACALPGMEALGLPPLDGESLADLEEPYVYHFPDGNAGLARLLVRYMLPDALPGTTMEDSVLARLHYEKLDLPENTTRLRLNSTVINAANVPDGVVVSYLRDGKMHRVRGKNTIMAGYNMLIPYLVPEMPEQQQADLKLNVKAPLVYTNVVVKNWQAFKQLGVHEFYSPAAPYSRVKLDYPVSIGGYQHPASPDDPMVIHMVYVPTYPGSNLSAREQFRLGRAYLLGTTFAAHEEMIRAQLQEMFGATGFDNQRDIAAITVNRWAHGYAYYPNSLFDDMDKMPEIIERARKPVGRIAIANSDSDWGAYAHTAIDQAWRAVNELKEMG
>CP024675.1|AYL65916.1|1526561_1527035_+|polyketide-cyclase
MKTLKVAVLSLVMLSGYSLAESTSLNTVNEYMAAWNAHDASRAAQYLADDAVYYDAAAGEPITGREKAEKEVIGAFIKAVPDLTWKMIGKPVYDEDTVAFRWQFSGKNSGEWAGSPPTNNLIRFEGVSYIHVKAGKITWQGDYYDSKKLDEELKPVK
>CP024675.1|AYL65926.1|1539177_1540182_-|tryptophan--tRNA-ligase
MNNKTIILTGDRPTGPLHLGHYVGSLRQRATLQHDYQQFILVADLQGLTDNGSTPQKIQNNIPEVLADYLAAGIDPSLTTICLQSALPALAELTALYMNIVTVARVERNPTVKNEIAQKGFARSLPVGFLVYPISQAADISAFKAEVVPVGDDQLPMIEQTNEIVHKMNSLLPAPVLSHCKALLSETSRLPGIDGNAKMSKSLGNTILLSASEETIHRAVSAMYTDPNHLKVSDPGQIDGNIVFTYLDAFHPDKIKVAEMKAHYQRGGLGDRACKNELEMCLQELIAPMRERRATYIQDKGILMAMLKKGSEQAHEVTQQTLREVKQGLGLPVF
>CP024675.1|AYL65927.1|1540400_1542185_-|hypothetical-protein
MRIATITNWAYSATVCLTIASGVVMLMASNADNTERQVVEQRYKFDQLTEEVELDAWSLSDMARLYVVSKDPDALNNYRQKEASLKAVEHRLAALKDAGATGEELALLHEGLQIVDALQDEQTAALASVARGEHTQAIALLFSKTYEQELERAQDRIDHFRQLLDNRVLNAIEDATQASRTLRTASEVMVGLTALLFLFVLGFILKRRVLRPVVRLSDVVNRLASQDYAVETPSFNQIDEIGDMAQAIRIFRENGLARQRLEKERDADWGIRELLARMTQRLQGCESFADVINVAELFAPNIAPGIAGRLYILDREPWQMRCVAQWLSPEGKADAFHPDECWAVRRGQSHPPVQDEPDIACYHLPESCQRHTLCVPLIAQGEAIGLLSFQNLSEDSTSSRAYLELMAEALGLALANQRLRDALLEKALYDPLTGLRNRHHLEDTLRTQMSQAVRTQEPISCLMIDIDHFKNINDRFGHEAGDSVIKSIAAVIQRVVHDSGMAFRYGGEEFLVLLAGADEQAANSFATDIYNGVRELSLRFGVSDIGHVDVSIGVASYPQHAQSDNLLRAADVALYRAKELGRSRIVSFGMLEAS
>CP024675.1|AYL65928.1|1542303_1543413_-|AI-2E-family-transporter
MRFNGLTKGFFIFILALVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNGLASLITIAIICLIVFIPLMVILSSLAIELNVVYNKLQQNDTQFPEVVTSILSYLPGWARGFLAEHNLDNVAEIQKKLSDIVLQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQILDSLPLSDFAKQHLFAKFVGVTRATVKGTAVVALVQGILGGIAFAIVDIDGSVLWGALMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNILRPLLVGKDTKMPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWNLFSGRDHAGNVEGIDEAFMEEGKNPPDL
>CP024675.1|AYL65929.1|1543649_1545578_-|GGDEF-domain-containing-protein
MNRILAGIIFFLFISTGYISFLVHERQQELQKLTHYTDSWSAAQMVSQYYRFESLLGLYTIDETTGLDEVRLRLDIMLSQSDLIKEGDLGHYIASNQAHSELALKLENTLNYLDVNLEKMNRSELQAYLKKMHTLDSQLGRLSSGALNKDVNSINNANLKIQTLYYIYSATSVLLIILSAILGVLIFFQNRNILRAHLQVKSLAEELQSSKEKLQIQNAKLEYDVYHDSLTDMNNRQFFWGNLNQTIEMAEKNNDSVTVMLFDLDRFKEVNDTYGHDAGDILLRQISDRLISMSHTSDTLYRLGGDEFAFLSSGLTESQAVSRAQKICDFISQPYTIYNTIINITTCVGIVISETERRSDYLYKFADLALYEAKNEGSGKIKVFRQWMLEKLQESRTLEHDMAMAIVNKEFVVYYQPIVDSFSREIYSYEALIRWVHPLKGLLSPDSFIPVAEKTGMINEMGKFVLEIACTEAASWTIPAKISVNVSPVQLSSKAFAGIVLTILKETGLPAQRLELEVTESSIFTESNTPMNTLNKLRALGVKISIDDFGTGYSSLSRLSRLAFDKIKIDKSFVHSLSTQDDALNIIKLITGMAKSLNMKAVAEGVETQEQLEKLQALGCDFAQGYLFGKPQPGIDGKIRHG
>CP024675.1|AYL65930.1|1545595_1546090_-|oxidoreductase
MRLFVMLLSLVVSTQLWAGELSKPTGKVLLTVSGNIENTNEDGKATFDTASLEKLGMVSFQTTSPWYNGRTTFTGIPLQKLMDFVGAKGTVVKVTALNDYTTVIPLNDFKKYNVILALKINGKYMQIRDKGPLFIVYPYDSISELNNQIYYSRSAWQVSRMDIE
>CP024675.1|AYL65931.1|1546490_1547132_-|transcriptional-regulator
MPKTDNNSLLSQLDTIARGLSETFSPFCEVVVHDLKKPEHAILAIHNNLSGRKPGQPATELGLARIASPDFPSIIANYSNQFADGRPVKSTSIGIKDEDGKYVAALCLNVDMTLFRGIQSALAQFTETEDSPIKEHIDPGSNEVIRQRIDDFAAKRATTARALKPEDRKLLIQQLRKEGLLNVRKSMDTVAQHLGVSRATAYLYARQSAHMRD
>CP024675.1|AYL65932.1|1547256_1548225_-|threonine/serine-dehydratase
MTDMTLPDYNDIVAAAERIADYANKTPVMTSRTVNEEFGAEVFFKCENFQRMGAFKFRGAMNALRQFTPQQRAAGVVTFSSGNHAQAIALSAKLLGIPATIIMPHDAPAAKVAATKGYGGNVVIYDRYTEDREKIGQDLAEKQGLTLIPPYDHPHVIAGQGTATKELIEEVGPLDVLFVCLGGGGLLSGSALAARHLSPDCVVYGVEPEAGNDGQQSFRSGNIVHIDTPKTIADGAQTQHLGQYTFAIIQQNVNDILTVSDTELVTAMKFIAERMKIVVEPTGCLGFAAARARKSELQGKKIGIIISGGNVDISRYGELLAG
>CP024675.1|AYL65933.1|1548252_1548648_-|RidA-family-protein
MSPDITLNASPGSFPPAGHYSHSTTAGGFVFISGQLPVTLDGEKKADASFEEQTRLALQNVDACLAGAGVSRQHLVSVRVYVTDINQWPTFNRIYGEWIGDFRPARAVAGVAELHYGFAVEIEAMALAPQA
>CP024675.1|AYL65934.1|1548873_1549182_-|monooxygenase
MSNKLVQIHFNFHGPFGAEMSQQLVELAESINQEPGFIWKIWTENEANHEAGGIYLFQDQDSAQAYIKKHTARLKHLGVEEVFFKIFDINEPLSKINHGHIG
>CP024675.1|AYL65935.1|1549221_1550013_-|isomerase
MQQIDFYMVDAFSTTTFAGNAAAVCPLTDWLPDETLLKMAQQHNQSETAFFVANDNGFELRWFTTQGEINLCGHATLAAAHVIFEHLDYPDTTIHFATRFVGPLMVTRSGEWLTLDFPAWQSEPVVPPALLLEALDITEYKEVRVGRDYMVVLEDQHHVEAVRPNIHAMVPLGKMVCITAPGDGEYDFVSRFFCPGEAVAEDPVTGSAHSMLIPYWAAKLNKTEMLARQVSERGGDLRCQLADSRVYIGGQATTYLTGKVLLR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024675_1	1.1\|1538688\|38\|CP024675\|CRISPRCasFinder	1538688-1538725	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	3	0.921

1. spacer 1.1|1538688|38|CP024675|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 3, identity: 0.921

cggacgcaatatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.******. ****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

923796 : 974876

Cronobacter_phage(71.79%)

head,integrase,holin,portal,terminase,tail,capsid,transposase

attL 924751:924766|attR 974640:974655

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL65355.1\|923796_924312_+	outer membrane protein OmpX	A5LH44	Enterobacteria_phage	1.9e-16	33.7
AYL65356.1\|924375_925962_-	phosphoethanolamine transferase	NA	NA	NA	NA
924751:924766	attL	NA	NA	NA	NA
AYL65357.1\|926238_926367_-	Mn(2+)-response protein MntS	NA	NA	NA	NA
AYL65358.1\|926535_927576_-\|integrase	integrase	A0A218M4I3	Erwinia_phage	1.1e-119	62.9
AYL65359.1\|927577_928159_-	phage repressor protein	F1BUS8	Erwinia_phage	1.4e-33	40.9
AYL65360.1\|928294_928516_+	regulator	NA	NA	NA	NA
AYL65361.1\|928546_929050_+	hypothetical protein	F1BUN6	Cronobacter_phage	1.7e-59	71.9
AYL65362.1\|929059_929287_+	hypothetical protein	NA	NA	NA	NA
AYL65363.1\|929276_929705_+	hypothetical protein	F1BUN5	Cronobacter_phage	5.6e-27	52.8
AYL65364.1\|929704_930106_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.7e-49	66.9
AYL65365.1\|930173_930407_+	hypothetical protein	NA	NA	NA	NA
AYL65366.1\|930397_930727_+	hypothetical protein	Q7Y4B7	Escherichia_virus	3.9e-12	46.4
AYL65367.1\|930716_931586_+	adenine methylase	F1BUN1	Cronobacter_phage	1.0e-131	81.7
AYL65368.1\|931582_931795_+	hypothetical protein	NA	NA	NA	NA
AYL65369.1\|931760_933812_+	replication endonuclease	F1BUM9	Cronobacter_phage	2.5e-298	74.9
AYL65370.1\|933931_934138_+	hypothetical protein	NA	NA	NA	NA
AYL65371.1\|934111_934435_-	transcriptional regulator	F1BUM8	Cronobacter_phage	4.7e-50	93.3
AYL65372.1\|934431_935493_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	3.5e-163	78.1
AYL65373.1\|935489_937265_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.8e-292	83.8
AYL65374.1\|937426_938230_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	4.4e-81	56.8
AYL65375.1\|938291_939314_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.0e-159	81.8
AYL65376.1\|939317_940019_+\|terminase	terminase	F1BUM0	Cronobacter_phage	2.6e-90	69.4
AYL65377.1\|940064_940568_+\|head	head completion protein	F1BUL8	Cronobacter_phage	6.8e-64	83.3
AYL65378.1\|940564_941071_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	5.2e-64	67.5
AYL65379.1\|941067_941775_+	hypothetical protein	F1BUL6	Cronobacter_phage	3.7e-100	75.2
AYL65380.1\|941771_942899_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	2.4e-173	81.6
AYL65381.1\|942895_943351_+	DUF2597 domain-containing protein	F1BUL4	Cronobacter_phage	1.6e-59	73.5
AYL65382.1\|943361_943664_+\|holin	holin	A0A0M5M1H1	Salmonella_phage	4.0e-19	54.3
AYL65383.1\|943650_943992_+	hypothetical protein	F1BUL3	Cronobacter_phage	1.5e-51	93.1
AYL65384.1\|943991_944372_+	hypothetical protein	F1BUL2	Cronobacter_phage	1.6e-28	63.2
AYL65385.1\|944301_944490_+	hypothetical protein	F1BUL1	Cronobacter_phage	7.7e-21	74.2
AYL65386.1\|944467_944734_+	hypothetical protein	A5X9I7	Aeromonas_virus	5.1e-18	57.3
AYL65387.1\|944921_946982_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	3.8e-270	68.7
AYL65388.1\|946978_947308_+	DUF2590 domain-containing protein	F1BUK8	Cronobacter_phage	9.3e-38	68.8
AYL65389.1\|947304_948489_+	hypothetical protein	F1BUK6	Cronobacter_phage	1.0e-182	80.9
AYL65390.1\|948475_949069_+	hypothetical protein	F1BUK5	Cronobacter_phage	4.1e-92	82.6
AYL65391.1\|949079_951083_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	8.8e-147	77.8
AYL65392.1\|951095_951632_+\|tail	phage tail protein	F1BUK2	Cronobacter_phage	5.8e-21	35.2
AYL65393.1\|951621_952347_+	hypothetical protein	F1BUK1	Cronobacter_phage	2.1e-66	54.8
AYL65394.1\|952318_952864_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.0e-65	73.1
AYL65395.1\|952863_954567_+	hypothetical protein	F1BUJ7	Cronobacter_phage	4.9e-223	79.9
AYL65396.1\|954680_955013_+	hypothetical protein	A0A222YZ97	Escherichia_phage	2.2e-23	50.9
AYL65397.1\|955586_955811_-	hypothetical protein	NA	NA	NA	NA
AYL65398.1\|955749_956388_-	hypothetical protein	NA	NA	NA	NA
AYL65399.1\|956433_956697_-	hypothetical protein	NA	NA	NA	NA
AYL65400.1\|956734_957334_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
AYL65401.1\|957537_958011_+	transcriptional regulator MntR	NA	NA	NA	NA
AYL65402.1\|958007_959117_+	anion transporter	NA	NA	NA	NA
AYL69072.1\|959211_960132_-	L,D-transpeptidase	NA	NA	NA	NA
AYL65403.1\|960364_961960_+	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	1.1e-59	28.5
AYL65404.1\|961910_962159_-	hypothetical protein	NA	NA	NA	NA
AYL65405.1\|962146_964525_-	alpha-glucosidase	NA	NA	NA	NA
AYL65406.1\|964527_965829_-	MFS transporter	NA	NA	NA	NA
AYL69073.1\|966117_967191_+	cytochrome-c peroxidase	NA	NA	NA	NA
AYL65407.1\|967187_968450_-	DUF1479 domain-containing protein	NA	NA	NA	NA
AYL65408.1\|968604_969417_-	HAD family hydrolase	NA	NA	NA	NA
AYL65409.1\|969639_972072_-	glycyl radical protein	A0A076YHZ7	Citrobacter_phage	2.3e-08	50.9
AYL65410.1\|972077_972977_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA
AYL65411.1\|973109_973772_+	fructose-6-phosphate aldolase	A0A0E3FJJ0	Synechococcus_phage	2.4e-24	33.2
AYL65412.1\|973946_974876_+\|transposase	ISNCY family transposase	Q2A0A7	Sodalis_phage	1.9e-64	52.0
974640:974655	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1283280 : 1333952

Enterobacteria_phage(33.33%)

portal,integrase,tail,tRNA

attL 1277485:1277503|attR 1298694:1298712

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1277485:1277503	attL	NA	NA	NA	NA
AYL65682.1\|1283280_1284567_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	5.5e-110	50.4
AYL65683.1\|1284566_1284782_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.7e-19	54.9
AYL65684.1\|1284848_1287329_-	exodeoxyribonuclease VIII	K7P6V4	Enterobacteria_phage	2.6e-108	38.2
AYL69088.1\|1287470_1287797_-	transcriptional regulator	NA	NA	NA	NA
AYL65685.1\|1288082_1288397_+	hypothetical protein	NA	NA	NA	NA
AYL65686.1\|1288772_1289153_-	transcriptional regulator	K7PH71	Enterobacterial_phage	6.5e-19	66.7
AYL65687.1\|1289258_1289471_+	XRE family transcriptional regulator	A0A077K9X2	Edwardsiella_phage	3.8e-16	59.7
AYL69089.1\|1289474_1290029_+	hypothetical protein	NA	NA	NA	NA
AYL65688.1\|1291059_1291650_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.3e-66	76.8
AYL65689.1\|1291773_1292127_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	4.8e-24	51.9
AYL65690.1\|1292174_1292537_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AYL65691.1\|1292554_1294306_+	arsenical pump-driving ATPase	NA	NA	NA	NA
AYL65692.1\|1294352_1295642_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	9.6e-171	73.8
AYL65693.1\|1295654_1296080_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	4.3e-51	70.7
AYL65694.1\|1296147_1296444_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AYL65695.1\|1296542_1297634_+	permease	NA	NA	NA	NA
AYL65696.1\|1297920_1298154_+	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-33	87.0
AYL65697.1\|1298199_1298445_+	hypothetical protein	H6WRY6	Salmonella_phage	2.9e-20	63.0
AYL65698.1\|1298574_1298775_+	hypothetical protein	H6WRY8	Salmonella_phage	7.2e-17	60.0
1298694:1298712	attR	NA	NA	NA	NA
AYL65699.1\|1298777_1299137_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.3e-42	64.4
AYL65700.1\|1299133_1300174_+	hypothetical protein	A0A291AWV9	Escherichia_phage	4.3e-97	50.3
AYL65701.1\|1300185_1300533_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	9.8e-54	85.0
AYL65702.1\|1300557_1301736_-	hypothetical protein	A0A291AUQ1	Sinorhizobium_phage	3.3e-53	32.5
AYL65703.1\|1301725_1302760_-	nucleoid-associated protein	NA	NA	NA	NA
AYL65704.1\|1302986_1303295_+	hypothetical protein	O64361	Escherichia_phage	4.2e-32	67.3
AYL65705.1\|1303287_1303824_+	lysozyme	K7PM52	Enterobacteria_phage	4.6e-95	93.6
AYL65706.1\|1303802_1304336_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	6.2e-07	39.0
AYL65707.1\|1304332_1304563_+	hypothetical protein	NA	NA	NA	NA
AYL65708.1\|1304953_1305151_+	hypothetical protein	K7PHC3	Enterobacterial_phage	4.9e-26	89.2
AYL65709.1\|1305188_1305332_+	DUF2514 domain-containing protein	NA	NA	NA	NA
AYL65710.1\|1305722_1305935_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	4.6e-22	72.9
AYL69090.1\|1305945_1306134_+	cold-shock protein	NA	NA	NA	NA
AYL65711.1\|1306207_1306438_+	hypothetical protein	NA	NA	NA	NA
AYL65712.1\|1306642_1306816_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
AYL65713.1\|1307152_1307644_+	DNA breaking-rejoining protein	Q9EYD0	Enterobacteria_phage	9.9e-44	56.9
AYL65714.1\|1307630_1309739_+	DNA packaging protein	S5MDQ1	Escherichia_phage	7.3e-293	66.1
AYL65715.1\|1309735_1309942_+	primosomal replication protein PriB/PriC domain protein	A5LH28	Enterobacteria_phage	8.2e-08	48.6
AYL65716.1\|1309938_1311474_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	8.7e-179	63.7
AYL65717.1\|1311391_1313506_+	peptidase S14	A0A291AWT6	Escherichia_phage	4.0e-275	71.7
AYL65718.1\|1313594_1313918_+	DUF2190 domain-containing protein	K7PLV6	Enterobacteria_phage	2.7e-29	64.2
AYL65719.1\|1313910_1314186_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	1.3e-13	42.9
AYL65720.1\|1314189_1314774_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	6.9e-76	77.1
AYL65721.1\|1314770_1315172_+\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	3.2e-48	65.4
AYL65722.1\|1315182_1315926_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	6.2e-98	75.6
AYL65723.1\|1315971_1316376_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	4.1e-27	52.6
AYL65724.1\|1316393_1316711_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.3e-32	64.2
AYL65725.1\|1316682_1319835_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	4.8e-264	53.5
AYL65726.1\|1319844_1320174_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.6e-42	71.3
AYL65727.1\|1320183_1320879_+\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	1.3e-94	70.6
AYL65728.1\|1320890_1321625_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.0e-116	77.4
AYL65729.1\|1321522_1322200_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.7e-76	74.2
AYL65730.1\|1322271_1325673_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	70.1
AYL65731.1\|1327612_1328197_+	hypothetical protein	Q7BQC6	Enterobacteria_phage	4.3e-46	46.9
AYL65732.1\|1328425_1329196_+	hypothetical protein	A0A289ZIY5	Serratia_phage	7.2e-49	42.9
AYL65733.1\|1329757_1330192_-	aminoglycoside 6'-acetyltransferase	NA	NA	NA	NA
AYL65734.1\|1330795_1332166_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	6.1e-107	44.6
AYL69091.1\|1332169_1332811_-	lysogenization protein HflD	NA	NA	NA	NA
AYL65735.1\|1332845_1333952_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_3

1443228 : 1453269

Tupanvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL65844.1\|1443228_1444212_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-33	38.5
AYL65845.1\|1444227_1446615_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AYL65846.1\|1446619_1446919_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
AYL65847.1\|1447074_1448055_+	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	8.7e-15	25.1
AYL65848.1\|1448115_1448667_+	glutathione peroxidase	NA	NA	NA	NA
AYL65849.1\|1448666_1449416_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	1.6e-08	28.2
AYL65850.1\|1449493_1449958_+	endopeptidase	A0A1V0DZX6	Clostridioides_phage	3.5e-14	38.2
AYL65851.1\|1450275_1450989_+	EAL domain-containing protein	NA	NA	NA	NA
AYL65852.1\|1451050_1452493_+	hypothetical protein	A0A075BSJ0	Microcystis_phage	1.8e-53	37.1
AYL65853.1\|1452489_1453269_-	heme ABC transporter ATP-binding protein	W5SAS9	Pithovirus	3.0e-10	26.6

DBSCAN-SWA_4

2388990 : 2398105

Bacillus_phage(28.57%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL66711.1\|2388990_2390394_+	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	2.7e-33	29.9
AYL66712.1\|2390390_2391113_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	9.2e-30	32.7
AYL66713.1\|2391278_2392640_+	U32 family peptidase	Q6DW11	Phage_TP	2.8e-205	93.2
AYL66714.1\|2392908_2395185_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.8e-165	42.1
AYL66715.1\|2395215_2395536_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
AYL66716.1\|2395859_2396084_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
AYL66717.1\|2396037_2396238_+	hypothetical protein	NA	NA	NA	NA
AYL66718.1\|2396158_2398105_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.4e-40	42.2

DBSCAN-SWA_5

2438816 : 2447246

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL66756.1\|2438816_2440850_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.2e-53	27.6
AYL66757.1\|2441065_2441524_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.3e-50	68.6
AYL69132.1\|2441568_2442039_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	2.8e-64	77.6
AYL66758.1\|2442085_2442805_-	two-component system response regulator YehT	NA	NA	NA	NA
AYL66759.1\|2442801_2444487_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.5e-282	91.8
AYL66760.1\|2444712_2445444_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.0e-105	92.5
AYL66761.1\|2445495_2445603_+	hypothetical protein	NA	NA	NA	NA
AYL66762.1\|2445583_2446315_-	osmoprotectant uptake system permease	NA	NA	NA	NA
AYL66763.1\|2446298_2447246_-	ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	6.9e-09	26.1

DBSCAN-SWA_6

3686497 : 3694148

Pseudoalteromonas_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL67800.1\|3686497_3687475_+	calcium/sodium antiporter	A0A2D1GNI8	Pseudoalteromonas_phage	8.1e-05	22.8
AYL67801.1\|3687488_3688475_+	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	31.2
AYL67802.1\|3688495_3689062_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	4.2e-54	76.3
AYL67803.1\|3689058_3689634_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AYL67804.1\|3689602_3690151_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
AYL67805.1\|3690157_3690883_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-22	28.4
AYL67806.1\|3690929_3692363_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
AYL67807.1\|3692385_3692673_+	ribosome hibernation promoting factor	A0A0M7QCF2	Escherichia_phage	5.5e-10	43.2
AYL67808.1\|3692756_3693248_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
AYL67809.1\|3693293_3694148_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.4e-05	28.4

DBSCAN-SWA_7

4181183 : 4191159

Enterobacteria_phage(100.0%)

integrase,capsid

attL 4181004:4181029|attR 4193500:4193525

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4181004:4181029	attL	NA	NA	NA	NA
AYL68257.1\|4181183_4182386_+\|integrase	integrase	Q7M297	Enterobacteria_phage	2.6e-210	92.7
AYL68258.1\|4182410_4184066_+	hypothetical protein	K7PHD1	Enterobacteria_phage	1.4e-12	24.8
AYL68259.1\|4184647_4184962_+	hypothetical protein	NA	NA	NA	NA
AYL68260.1\|4185340_4185907_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.8e-60	65.4
AYL68261.1\|4185922_4186162_-	hypothetical protein	Q7M294	Enterobacteria_phage	1.7e-20	61.7
AYL68262.1\|4186165_4187026_-\|capsid	capsid protein	NA	NA	NA	NA
AYL68263.1\|4187709_4188261_+	ASH family protein	Q7M2A7	Enterobacteria_phage	1.9e-35	73.1
AYL68264.1\|4188257_4188485_+	hypothetical protein	NA	NA	NA	NA
AYL68265.1\|4188481_4188802_+	hypothetical protein	NA	NA	NA	NA
AYL68266.1\|4188816_4191159_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.2
4193500:4193525	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage