CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP024672	Citrobacter freundii strain HM38 chromosome, complete genome	1 crisprs	WYL,DinG,cas3,csa3,DEDDh,PD-DExK	0	1	6	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP024672_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP024672_1

1530682-1530805

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP024672_1

>merge|CP024672|1|1530682-1530805|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAAGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP024672|1|1|1530682-1530805|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAAGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP024672.1\|AYL75333.1\|1538518_1539223_-\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185203
CP024672.1\|AYL75323.1\|1526979_1528035_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238562
CP024672.1\|AYL75331.1\|1535178_1537593_-\|fimbrial-assembly-protein	unknown	unknown	gnl\|CDD\|237937
CP024672.1\|AYL75317.1\|1517462_1519355_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|379192
CP024672.1\|AYL75334.1\|1539448_1539754_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP024672.1\|AYL75329.1\|1532790_1533771_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
CP024672.1\|AYL75318.1\|1519358_1520567_+\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|379187
CP024672.1\|AYL75328.1\|1531701_1532712_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
CP024672.1\|AYL75326.1\|1529761_1530484_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270259
CP024672.1\|AYL75325.1\|1529022_1529775_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP024672.1\|AYL75330.1\|1534630_1535182_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185201
CP024672.1\|AYL75332.1\|1537714_1538419_-\|fimbrial-chaperone-protein	unknown	unknown	gnl\|CDD\|236632
CP024672.1\|AYL75320.1\|1522192_1523455_+\|4-aminobutyrate-transaminase	unknown	unknown	gnl\|CDD\|182078
CP024672.1\|AYL75324.1\|1528021_1529026_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP024672.1\|AYL75327.1\|1530874_1531057_+\|hypothetical-protein	unknown	unknown	unknown
CP024672.1\|AYL75322.1\|1525810_1526821_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
CP024672.1\|AYL75321.1\|1523668_1525801_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
CP024672.1\|AYL75319.1\|1520610_1522086_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
CP024672.1\|AYL75335.1\|1540352_1540604_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184255
CP024672.1\|AYL78420.1\|1533843_1534485_-\|DUF1120-domain-containing-protein	unknown	unknown	gnl\|CDD\|185203

Protein	Function_ID	Function_description	E-value
CP024672.1\|AYL75333.1\|1538518_1539223_-\|DUF1120-domain-containing-protein	gnl\|CDD\|185203	PRK15303, PRK15303, hypothetical protein; Provisional.	1.18285e-30
CP024672.1\|AYL75323.1\|1526979_1528035_+\|hypothetical-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	3.99191e-82
CP024672.1\|AYL75331.1\|1535178_1537593_-\|fimbrial-assembly-protein	gnl\|CDD\|237937	PRK15304, PRK15304, putative fimbrial outer membrane usher protein; Provisional.	0
CP024672.1\|AYL75317.1\|1517462_1519355_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|379192	pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain.	6.8744e-06
CP024672.1\|AYL75334.1\|1539448_1539754_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.34689e-10
CP024672.1\|AYL75329.1\|1532790_1533771_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.93083e-79
CP024672.1\|AYL75318.1\|1519358_1520567_+\|alcohol-dehydrogenase	gnl\|CDD\|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	2.61283e-10
CP024672.1\|AYL75328.1\|1531701_1532712_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	7.49337e-175
CP024672.1\|AYL75326.1\|1529761_1530484_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270259	cd13541, PBP2_ModA_like_2, Substrate binding domain of molybdate-binding proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.11499e-88
CP024672.1\|AYL75325.1\|1529022_1529775_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.05952e-80
CP024672.1\|AYL75330.1\|1534630_1535182_-\|hypothetical-protein	gnl\|CDD\|185201	PRK15301, PRK15301, hypothetical protein; Provisional.	2.45537e-08
CP024672.1\|AYL75332.1\|1537714_1538419_-\|fimbrial-chaperone-protein	gnl\|CDD\|236632	PRK09918, PRK09918, putative fimbrial chaperone protein; Provisional.	3.53319e-98
CP024672.1\|AYL75320.1\|1522192_1523455_+\|4-aminobutyrate-transaminase	gnl\|CDD\|182078	PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.	0
CP024672.1\|AYL75324.1\|1528021_1529026_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.09202e-82
CP024672.1\|AYL75322.1\|1525810_1526821_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	9.50333e-69
CP024672.1\|AYL75321.1\|1523668_1525801_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.78735e-69
CP024672.1\|AYL75319.1\|1520610_1522086_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.46281e-137
CP024672.1\|AYL75335.1\|1540352_1540604_+\|hypothetical-protein	gnl\|CDD\|184255	PRK13699, PRK13699, putative methylase; Provisional.	2.80115e-14
CP024672.1\|AYL78420.1\|1533843_1534485_-\|DUF1120-domain-containing-protein	gnl\|CDD\|185203	PRK15303, PRK15303, hypothetical protein; Provisional.	1.68828e-20

>CP024672.1|AYL75326.1|1529761_1530484_-|molybdate-ABC-transporter-substrate-binding-protein
MPSSILLFAAGSLRPAFTPLISQFTRMSGIDVKVEYGPAGLLRERIEAGEPCALFASANREHPQNLLVRNKAVSTHTFCWNKLSLVSNRIGTWLDLLRDPTLRPGTSTPGCDPSGDYTWAFFDNMDVLEPGLGQQLRARAIPLVGGRDTVKIPQGELASAWILRQGLADLFIGYAHYAHALHAMTDVHYVAIPDEHNIFCEYQLAVLDASKEVMALVEFILSRSGQAFLTAAGFLPLNAE
>CP024672.1|AYL75325.1|1529022_1529775_+|ABC-transporter-ATP-binding-protein
MIPAALRVNQLSYGYRAPLFEPLTFCCQKGDIWAVLGRNGLGKSTLLDTLTGTLPALGGSIENNGGIGIVAQHSHLPFPYTVSDVVLMGRAQHVKLFSQPSQQDQQRAMQALEQLSIAHLASSSFGSLSGGQQQLVMIARALVTECQTLLLDEPCSALDLANQQVVLQLISDLAHQQGCSILFSTHDPLHALQVASHTLLLLPEGKWRAGPTDSIVTEENLFLAYGLPLRKLSVENHPTPFIAPLFSIRR
>CP024672.1|AYL75324.1|1528021_1529026_+|iron-ABC-transporter-permease
MQLSNRFLPQQPLLIVVVLLLGVSSLCLGQYPLSLSEVFYHLTHYSDAEGIASQVIWTVRLPRILMALLAGGALGLCGATLQGVFHNPLVDPHIIGVTSGAAFGGTLAILLGLSPLLMMGSTFFFGLTALILVYAIAALQGLENTLVLILSGIILSGFFAALVSLIQYQADTEETLPNIVFWLLGSFATANWHKVLLLAVPVGIAATVLFQLRWRINLLSLNDKDARALGVAVVPLRRSVLVCCAFLVAAQVAVSGSIAWVGLVIPHLARLLVGVDHRRLLPCAFWLGGGFMIVVDDIARTLMHAEIPLGIITALFGAPLFAFLLIRTSRREKS
>CP024672.1|AYL75323.1|1526979_1528035_+|hypothetical-protein
MLTFRSFVLVCASMLFAFSAQADRTITDQLGRQVTIPDHVDKVVVLQHQTLNILVQLNAQQDIVGVMSSWKKQLGPEFARFMPTITTLPTPGDLTSVNIESLLAIHPQVVFVANYAPAEMIQQIQNAGIPVVAISLRKDADGQQNKMNPTMADEEQVYNEGLKQGIRLIADVVGRKPQAETLIDYVFAARAKFNAPVANIPDAQKVRIYMANPDLMTYGSGKYTGLMMQHAGGLNVAAASVKGARQVALEQVLAWNPQVIFVQDRYPQVVTQIQNDPNWQGIDAVKNHRVWLMPEYAKAWGYPMPEALAIGELWMAKKLYPDAYKDVDVDAQAQDYYQRFYRVNWQSDAAK
>CP024672.1|AYL75322.1|1525810_1526821_+|ABC-transporter-substrate-binding-protein
MKTCHTWLLCVWLAFPALATRQVVDDAGHTVTVPTHVERIADGWFAHHSVLMTLGAGRNIVVTVNHEDNQPWMFKINPSLRQALQIRGTSFNTEDLLARHVDVVFVAKGKGDAQSYSQAGIPALEMAFTDYASMEKSVTTTAEVLGTGQARARATAYNQYLNRVLADVQAKTAKLSADQRPRVLHIQSLNPLKVDGRNTLIDTWITLTGGRNAADEVDGNMKEVSPERVLYWQPQVIILGAGCGDIASSPYAALFKELDAVKQGNVWRNPAGVFPWDRYGTESALQLQWAASKLHPTLFSGLDMVSVTRDFYRQFFDYSLTPAQAMRILNALPPQE
>CP024672.1|AYL75321.1|1523668_1525801_+|TonB-dependent-siderophore-receptor
MLNNKITPVASGLLTFACLSTVVTAHAEDTVIVSAPATSQSSLSEHEPPASEKKATLGSLGERELIDVPWSVQTLSKKVLDQQQIKDVKDAYRYLPSVQGDGVRPQTRGMQGSVVQNHMIDGLNAVSTTEYSTEQFQNIEVLSGIAGSLYGPANPAGMFNLVSKRPVDTPLHRVTVGQGTGSGTLTSMDFSGPIDAGDRVKYRLNLLNDEGHSYTTDSHVRRQYAGLGLDFQLTDQTVLESNFSYYHYYEKGMPGSFALAKGVHFPAAFDPTDSKYGQSYAGHDDETTTVDMHIKHDFDGNWMLDLGALHQVADRESTAVTNTLTNNQGDYTTTTANSAASRFTINSYLANLTGSVDTGWLTQDIATGMRGFVWKNYNPRNGGTFTLGHSSLNQHPDYPRPPYPDFNDRYHSATTTQHAFLLSDTLHFSPQWSLLLSGSENLFTVSNYNKAGHESSRQKDNGMSGSTSLMYKPVENVTLYTTWADSLQQGDTAPAGARNAGQVLDPYRSRQIEVGAKYAPVKDLLLTAALFEAKRPFAYTNDNGDFAQDGTQKNRGLELMADGHITHNLRVLGGGAWLDPTLHNTAASNADGKQVVGLPRFASNILAIYTIERVPGLDVDTNVHYVGRRATDNANDSWVGSYTTVDIGTRYATRLWNTPTTFRFDITNLTDRHYWTNIVPGALTGYTGAGAASAQLGAPRQAQVSVQVDF
>CP024672.1|AYL75320.1|1522192_1523455_+|4-aminobutyrate-transaminase
MNNKNLQQRRLDATPRGVGVMCDFYAQSAENSTITDIEGNQYIDFAAGIAVLNTGHRHPRLVQAVEAQLQAFTHTAYQIVPYESYVSLAEKINAVAPIDGKRKTTFFTTGAEAVENAVKIARAHTGRPGVIAFGGGFHGRTYMTMALTGKVAPYKKGFGPFPGSVYHAPYPSELQGISTEDSLKAIERLFKADIDPTQVAAIIFEPVQGEGGFVVAPPEFVAAIRRICDEHGIVMIADEVQSGFARTGQLFAMDHYADKADLMTMAKSLAGGMPLSGVVGKAEIMDAPAPGGLGGTYAGNPLSIAAAHAVLDIIHDEQLCQRAAALGEQLRAALTDAQAGCPELAEVRGLGSMIAAEFCDPATGEPNASAAQRVQKKALEQGLLLLTCGQYGNVIRFLYPLTIPQDQFAKALQIIKAATK
>CP024672.1|AYL75319.1|1520610_1522086_-|PLP-dependent-aminotransferase-family-protein
MRSLAGDVIKQAFSQQTDEKLHRRLYAAICSCILEGSLKPATRMPPSRDLAGELTLSRNTVLRVYEQLQAEGYISARTSSGTFVTDSVLDNLNLRPNKEPVAAALEDHTRLSARCLELLGNASASPRQWGAFIPGVPDVEHFPHRVLKKIQDRLARRLRPEFLTYDAAGGVNELKEALADYLRTARGVRCSPEQILITEGIHQALDLVTRTLCNPGDYAWIEEPGYWGIKNILRINAVNFSAIPVDEQGMIPPDSGETPPKLIFVTPSHQYPLGSVMSLSRRRQLIFRARETRSWIVEDDYDSEFRFSGQPIPSLQGLEEETPVIYIGTFSKTLYPALRLGYVVLPKSLAAPLKKVHNDLYRGGHLLIQAALAEFIREGYYAAHIRKMRQLYSRRRQMLVELISRQLGEHYLGSFSSNAGLHMILQLPAGSDDAVIAQQANAQGLLVRPLSRYYVNEEKRSGLLLGFASIEEHEMAAAFTRLADIIRANTV
>CP024672.1|AYL75318.1|1519358_1520567_+|alcohol-dehydrogenase
MRNVTILAACLFTASVSATESNGEYIARISDCVACHTAEGGAAMAGGKKFPTPVGDIYSTNITPDTAQGIGNYSYEDFEKAVRQGIAKDGHPLYPAMPYPSYAKLSDEDVQALYRYFMHDVTPSAQPNKENAIPWLLSARWPLHIWNWLFTDAPATTVDSAKPDDNTALIKRGAYLVEGPGHCGSCHTPRGMAMNEKAYTHADAEYLSGAMIDGWYAPSLRGSGMSEQALKSLLLTGKSKHAAVSGSMAEVVTQSTQYLTDEDATAIAQYLLSLKSAKPETVRAAATTASWSNSPEAGKVTYNRYCSTCHGLEGKGTDDNAPSLVNNPLVMVDDPTPLFRVIAHGAETPTTRGSVSFKMPAYGGMLSDNEMRDVINYVRKTWGEGNGEVSHEDLAGIKKASH
>CP024672.1|AYL75317.1|1517462_1519355_+|NAD(P)/FAD-dependent-oxidoreductase
MAITRRDFLNGVAVTIAAGLTPLEWVRAAGKGNAFIDGNYYPPALTGLRGNHPGSFEMAHALGREHKHFDLNALPVEEEYDLVIVGGGISGLAAGCFWRQVAGQNSRILILDNHDDFGGHAKRNEFTSSGKKLLGYGGSEAFQSPAHNFSPEVQKLMETVGVSVTRLKESFDVNFYPDWQLSRGVFFDKKNFGVTKIVSGDPGRAVSDDIPPDRLNGRKIEDFINDFPLSENDRKALIDLHVRPGDYLPGMTVDEKMEWLDTHSYSEFLATKVGLSKMALLYFQQRSNDFFAIGIEGISCSDARACALPGMEGMGLPPLDGESLADLEEPYVYHFPDGNAGLARLLVRYMLPDALPGNTMEDSVLARLHYEKLDLPENTTRLRLNSTVINAANVQDGVVVTYLRDGKMHRVRGKNTIMAGYNMMIPYLVPEMPEQQQADLKLNVKAPLVYTNVVVKNWQAFKQLGVHEFYSPAAPYSRVKLDYPVSIGGYQHPASPDDPMVIHMVYVPTYPGSNLSAREQFRLGRAYLLGTTFAAHEEMIRSQLQEMFGSTGFDNQRDISAITVNRWAHGYAYYANSLFDDMDKMPEIIERARQPVGRIAIANSDSDWSAYAHTAIDQAWRAVNELKDMG
>CP024672.1|AYL75327.1|1530874_1531057_+|hypothetical-protein
MAFFFLISRDCRVIKQVDYILLILQRVFYSCSRQGHNGNGLNDMSTQSFSVARIVASIFS
>CP024672.1|AYL75328.1|1531701_1532712_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MVKVGINGFGRIGRNVLRAALGNSDIQIVAINDLTDSKTLAHLLKYDSLLGKLDADVAASEGQLVVNGNSITVFSERDPAKIPWRQREVDIVIEATGFFTERDKAAVHIHSGGAKRVIISAPGKNDDLTIVMGVNDHLYSADKHFVVSNGSCTTNGLAPAAQVLHQHFGIKHGLMNTTHAYTNSQALHDQPEKDLRGARAAALSIVPYSSGAAKALGKVIPELDGRLTGYSLRVPVPVVSIVDLTVTLERDVTEEEVNNAFRNAAATGPLKGILGYSDEPLVSSDYQGDPRSSIIDGLSTLVIGGNMVKILAWYDNEWGFSNRLVDLALLMAKNER
>CP024672.1|AYL75329.1|1532790_1533771_-|AraC-family-transcriptional-regulator
MKKILIIVPDGGMLFESAGIADIMMQANRLHPKSATETCYQVQLATTQPHQVIHGQSGLNLLADHRLHEIDPREPLDTIIITGRGQNPQEGIAVVDWLRLAAPHARRIASICGGAMLLAQTGLLDGRRATTHWKLLETMQAEFPQVRVESGPLYIQDEHIWTSGGVSSGFDLTLALVEEDYGFSLARDVAQDFVMYLRRPGGQLQFSRYNLQHTSTLGPINDLLVWLLENLTADLSVDKLAEKVAMSPRNFTRVFTRETGASPARYVAEARLAAARQRLEQTNETLERIAEQTGFGSSINLRRLFEKQLHLTPGEYRQRFHCRKMA
>CP024672.1|AYL78420.1|1533843_1534485_-|DUF1120-domain-containing-protein
MITKAYAENTVDVNFSAEMIPAACRVSLDNGGTVDYGTLSLSSIRSSSPYLLTPRVIGLHIQCESLRQVAWMVNDEKAETRVRNLIIDSHDDKTSGRHSSDTLFGLGVTSGQKPIGGYLITALAGESAVEGDIASWGYQTGEQERSMWQSAGTALTLISGIMRLTPVDAKNNPVAIRQLTIPLRISAAIASDGLSLQDETELQGEATISLIYL
>CP024672.1|AYL75330.1|1534630_1535182_-|hypothetical-protein
MIRLISLCCGIYFIVSPVVQAQCNIIASQLRHEYGKVRFQDTEPSGQVQWQQLPARQVQVQVRCDVPQPIHIRFDDNDRRGLDFSFGEEGRATVMFSEAFVDNKSSQFVVHHELNKSSESRSQTPIAVLNGDTVELQQHHQPVNGMSATFLLTVIPRVQARSFQVSDQQASTLSLRMTVPERE
>CP024672.1|AYL75331.1|1535178_1537593_-|fimbrial-assembly-protein
MPFNLIRTLPVHRYAYYLFLGLLGSYSMMLSAEPLLFDDGRLKNRGLDAGLSHYFSHAARFSPGEYPVSWVINGRNKRQLMTRFNAQGEPCITPETSRNLGLAYEFNQGCLDYQTLYPAAQLTADPYKNQISITVPTSALTPESILLRKDIIQGGTSGLLNYNLQSSTTVQSGKHETYQLGLFESGLNLNDWLLRSRHTVSYSDGTRRSQRLYTYVQKTFQSLQQTFQAGEIYARQTLLAIPGLTGLQLFPDSALRPARSGVSVQGIARSAQARVEVYQNGQLIEATQVPEGPFSLDNISMLSTQFPLDVKVTEQDGQLTTFSVPVTALQTPADAPLYGSVALGKVRETVASDESAPWLITGSQGMRISRQATLSGSALASAQYQSAAASLSFIPILAWSLSLQTTMAQEQYTHHAGSKESLSLRYQLNPSASIQAAWTTTSAGFRELSDAVNHTTSTANSYYNVGGNWAHEHLGLFSLSYSTSSARDHAATPKSWYASWSKNWRWAGHGQINLSATWQRVSGSRTSTQRDDDVFYIRLGLPLGHDRVNLSLRRQGSRTYNDVQTSGQWDDMSYSLSAGRDWQNAQNTISGSFGQNLHYAQMSGYASQTANYWGYGGSLSGGISVNQEGILFSPYAIQESYGALSLNSPLSGIKVSTPQGPVWTDYRGKALVPGLTPWQPSRLNIDVKTLPRHVDLTNGAAELTVSRGAVAFTQFRVSDTRRVLMTVRRIDGKLLSKGKGIVDSDGQYVTNSLEKGLVFFSNLQPGESFFVGDDNGSPMCQLQYSLPPTPPQDGLYEELTGVCE
>CP024672.1|AYL75332.1|1537714_1538419_-|fimbrial-chaperone-protein
MRQPFFFWKVLFILSLFLICVPQVSMATGMQPDSSLLLIQEKESGGSMNVTNTDNIPSLLYTQVINVDGEDDTIKLLPTQPVVRVEGGKTQQVRFILKTEKPLITEHLKRVIFEGIPPKIPGSNKIGITIRQNLPVLIHPEGLPERKDPWTLLTWHKEGNQLKVTNPGPYVVRLAQQFVTLPSKTQFDLGRTYLLPGQHITLSSASSLTADNEVRFVPVSRYGVQVSEFIASLN
>CP024672.1|AYL75333.1|1538518_1539223_-|DUF1120-domain-containing-protein
MKLNKLLVALSLTFISGSVLAAGGDTATLKVTGKLVPGACAVNLDNAGIVDYGTMLMTNLSATEDNQLPEKRINMGIKCNSERLVAYTLHDERRDSLYNGVIKNATVDGSDIPASSNQFGLGLTNDGETTLGAYTVINWFPDMTYSGSTDNLVFISKKITSDDWSRTASGSTVNGVDVAARLHTLGNPDTLTPAAFSELKVPLSIKGVLRKGEDLKITDETNLDGEATISLVYL
>CP024672.1|AYL75334.1|1539448_1539754_-|XRE-family-transcriptional-regulator
MHLKYNISNVNARIGRFVRSNRQRMNMSAEELAVELNICQQHVSRFERGQCAFTLEFILRILNVFNIRLSHLVSEVFYEDSQVFSKARNIIQNNSMTKTIN
>CP024672.1|AYL75335.1|1540352_1540604_+|hypothetical-protein
MRKDIHCWLQCTAPEWTQDGRLFRFFPDRAVDFIPHRSPAVGRSPWPFRHSIAGDKSDEWLQPTCNEMKCVLKTDALMDALRT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP024672_1	1.1\|1530725\|38\|CP024672\|CRISPRCasFinder	1530725-1530762	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	3	0.921

1. spacer 1.1|1530725|38|CP024672|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 3, identity: 0.921

cggacgcaagatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.******..****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1276995 : 1338127

Enterobacteria_phage(18.75%)

integrase,tRNA,plate,tail,terminase,holin,portal

attL 1270118:1270132|attR 1319123:1319137

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1270118:1270132	attL	NA	NA	NA	NA
AYL75091.1\|1276995_1278114_-\|integrase	integrase	O21940	Phage_21	1.7e-78	43.6
AYL78399.1\|1278088_1278352_-	excisionase	NA	NA	NA	NA
AYL75092.1\|1278419_1280891_-	exodeoxyribonuclease VIII	K7P6V4	Enterobacteria_phage	1.1e-109	38.3
AYL78400.1\|1281032_1281359_-	transcriptional regulator	NA	NA	NA	NA
AYL75093.1\|1281419_1281632_-	hypothetical protein	NA	NA	NA	NA
AYL75094.1\|1281839_1282277_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	3.3e-38	61.2
AYL78401.1\|1282366_1282597_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	2.1e-20	61.8
AYL75095.1\|1282599_1283154_+	hypothetical protein	M9NZI6	Enterobacteria_phage	1.9e-14	33.0
AYL75096.1\|1284184_1284775_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.3e-69	78.4
AYL75097.1\|1284790_1285207_+	hypothetical protein	NA	NA	NA	NA
AYL78402.1\|1285212_1285551_+	DNA breaking-rejoining protein	H6WRX9	Salmonella_phage	1.8e-15	46.7
AYL75098.1\|1285547_1286288_+	site-specific DNA-methyltransferase	A0A0H5BBV5	Pseudomonas_phage	1.3e-84	64.9
AYL75099.1\|1286763_1287522_+	hypothetical protein	NA	NA	NA	NA
AYL75100.1\|1287832_1288066_+	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	8.6e-38	98.7
AYL75101.1\|1288111_1288357_+	hypothetical protein	H6WRY6	Salmonella_phage	1.1e-19	61.6
AYL75102.1\|1288486_1288687_+	hypothetical protein	H6WRY8	Salmonella_phage	7.2e-17	61.5
AYL75103.1\|1288689_1289049_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	1.0e-42	65.3
AYL75104.1\|1290099_1290531_+	antitermination protein	Q8W638	Enterobacteria_phage	2.1e-37	60.0
AYL75105.1\|1290817_1291030_-	cold-shock protein	NA	NA	NA	NA
AYL75106.1\|1291326_1291542_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	5.9e-25	80.6
AYL75107.1\|1292862_1293141_+\|holin	holin	K7P6H9	Enterobacteria_phage	3.9e-45	100.0
AYL75108.1\|1293112_1293661_+	lysozyme	K7PM52	Enterobacteria_phage	8.4e-100	96.2
AYL75109.1\|1293657_1294173_+	DUF2514 domain-containing protein	A0A0A0P0G7	Enterobacteria_phage	1.7e-06	51.5
AYL75110.1\|1294575_1294788_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.1e-22	74.3
AYL78403.1\|1294798_1294987_+	cold-shock protein	NA	NA	NA	NA
AYL75111.1\|1295060_1295291_+	hypothetical protein	NA	NA	NA	NA
AYL75112.1\|1295495_1295669_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
AYL78404.1\|1295958_1296465_+\|terminase	terminase	K7PJY2	Enterobacterial_phage	9.0e-48	63.1
AYL75113.1\|1296468_1298586_+	DNA packaging protein	A0A291AWY5	Escherichia_phage	1.5e-306	70.6
AYL75114.1\|1298582_1298798_+	hypothetical protein	NA	NA	NA	NA
AYL75115.1\|1298806_1300318_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.4e-149	54.2
AYL75116.1\|1300274_1302377_+	peptidase S14	S5M7Q8	Escherichia_phage	3.6e-199	52.5
AYL75117.1\|1302449_1302785_+	DUF2190 domain-containing protein	Q9EYD5	Enterobacteria_phage	1.2e-13	46.4
AYL75118.1\|1302784_1303141_+	hypothetical protein	NA	NA	NA	NA
AYL75119.1\|1303142_1303799_+	hypothetical protein	R9TR34	Vibrio_phage	7.8e-20	35.8
AYL75120.1\|1303810_1304365_+	hypothetical protein	NA	NA	NA	NA
AYL75121.1\|1304357_1304975_+\|plate	phage baseplate assembly protein V	Q9JML8	Wolbachia_phage	3.0e-13	36.2
AYL75122.1\|1305013_1306483_+\|tail	phage tail protein	R9TMQ0	Vibrio_phage	2.0e-76	37.8
AYL75123.1\|1306479_1306986_+\|tail	phage tail protein	NA	NA	NA	NA
AYL75124.1\|1307044_1307344_+\|tail	phage tail assembly protein	Q75QK8	Wolbachia_phage	7.2e-05	31.6
AYL75125.1\|1307446_1309372_+	hypothetical protein	A0A2I7R3J9	Vibrio_phage	9.3e-29	35.4
AYL75126.1\|1309368_1309839_+\|tail	phage tail protein	R9TMP6	Vibrio_phage	1.1e-23	44.3
AYL75127.1\|1309813_1310029_+\|tail	phage tail protein	R9TR63	Vibrio_phage	9.7e-12	51.4
AYL75128.1\|1310030_1311149_+	late control protein D	R9TNM7	Vibrio_phage	5.6e-34	33.1
AYL75129.1\|1311188_1311542_+\|plate	baseplate assembly protein	R9TRM1	Vibrio_phage	5.0e-21	54.1
AYL75130.1\|1311525_1312446_+\|plate	baseplate assembly protein	A0A088FQL4	Escherichia_phage	1.3e-65	49.2
AYL75131.1\|1312435_1312999_+\|tail	phage tail protein I	Q6K1H3	Salmonella_virus	3.1e-25	36.7
AYL75132.1\|1312991_1314689_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.8e-76	41.8
AYL75133.1\|1314688_1315267_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	1.9e-57	57.1
AYL75134.1\|1315286_1315865_-	serine acetyltransferase	NA	NA	NA	NA
AYL75135.1\|1316188_1316302_-	virulence protein	S4TND2	Salmonella_phage	2.4e-09	78.4
AYL75136.1\|1318547_1319411_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	4.4e-10	25.8
1319123:1319137	attR	NA	NA	NA	NA
AYL75137.1\|1319394_1320531_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	7.2e-29	40.3
AYL75138.1\|1320781_1322008_+	peptidase T	NA	NA	NA	NA
AYL75139.1\|1322110_1323232_-	cupin domain-containing protein	NA	NA	NA	NA
AYL75140.1\|1323324_1324788_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AYL75141.1\|1324787_1325459_-	two-component system response regulator PhoP	NA	NA	NA	NA
AYL75142.1\|1325623_1326994_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.7e-107	44.6
AYL78405.1\|1326997_1327639_-	lysogenization protein HflD	NA	NA	NA	NA
AYL75143.1\|1327673_1328780_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AYL75144.1\|1328833_1329295_-	NUDIX hydrolase	NA	NA	NA	NA
AYL75145.1\|1329304_1330237_-	hypothetical protein	NA	NA	NA	NA
AYL75146.1\|1330271_1330889_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AYL75147.1\|1331091_1332342_+	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	9.4e-22	94.4
AYL75148.1\|1332477_1332987_-	DedA family protein	NA	NA	NA	NA
AYL75149.1\|1333161_1333404_-	DinI family protein	Q6UAW0	Klebsiella_phage	1.5e-29	77.9
AYL75150.1\|1333791_1334490_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-89	68.1
AYL78406.1\|1334575_1334896_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	3.2e-19	44.8
AYL75151.1\|1334940_1336230_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	3.2e-166	70.4
AYL75152.1\|1336242_1336668_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	7.3e-51	70.7
AYL75153.1\|1336911_1337115_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-20	92.2
AYL78407.1\|1337641_1338127_+	hypothetical protein	A0A1B0VBR9	Salmonella_phage	1.7e-08	34.9

DBSCAN-SWA_2

2072328 : 2145412

Salmonella_phage(23.91%)

integrase,tRNA,capsid,holin,protease,tail,terminase,head,portal

attL 2105805:2105832|attR 2145543:2145570

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL75803.1\|2072328_2073024_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	A0A0R6PI74	Moraxella_phage	5.8e-05	35.4
AYL75804.1\|2073082_2074993_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	9.1e-93	33.1
AYL75805.1\|2075133_2075478_+	RidA family protein	NA	NA	NA	NA
AYL75806.1\|2075484_2075664_-	YoaH family protein	NA	NA	NA	NA
AYL75807.1\|2075744_2077109_+	aminodeoxychorismate synthase component 1	S4VNU7	Pandoravirus	8.3e-40	40.2
AYL75808.1\|2077112_2077691_+	CoA pyrophosphatase	NA	NA	NA	NA
AYL75809.1\|2077874_2079239_+	L-serine ammonia-lyase	NA	NA	NA	NA
AYL75810.1\|2079369_2080971_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AYL75811.1\|2082995_2083958_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
AYL75812.1\|2084016_2084817_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
AYL75813.1\|2084829_2085681_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
AYL75814.1\|2085741_2086200_+	DUF986 domain-containing protein	NA	NA	NA	NA
AYL75815.1\|2086578_2087199_+	hypothetical protein	NA	NA	NA	NA
AYL75816.1\|2087195_2088005_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
AYL75817.1\|2088068_2089814_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
AYL75818.1\|2090033_2090243_-	cold-shock protein CspC	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
AYL75819.1\|2090255_2090399_-	DUF2627 domain-containing protein	NA	NA	NA	NA
AYL75820.1\|2090360_2090624_+	hypothetical protein	NA	NA	NA	NA
AYL75821.1\|2091035_2091320_-	hypothetical protein	NA	NA	NA	NA
AYL75822.1\|2091394_2091538_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
AYL75823.1\|2091702_2091942_+	hypothetical protein	NA	NA	NA	NA
AYL75824.1\|2092056_2092848_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
AYL75825.1\|2093022_2094396_+	MFS transporter	NA	NA	NA	NA
AYL75826.1\|2094442_2095324_-\|protease	protease HtpX	NA	NA	NA	NA
AYL75827.1\|2095516_2097565_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.2e-87	33.7
AYL75828.1\|2097584_2098271_-	RNA chaperone ProQ	NA	NA	NA	NA
AYL75829.1\|2098367_2098865_-	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
AYL75830.1\|2098993_2100277_+	paraquat-inducible protein A	NA	NA	NA	NA
AYL75831.1\|2100245_2102879_+	MCE family protein	NA	NA	NA	NA
AYL75832.1\|2102958_2104380_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AYL75833.1\|2104477_2104717_+	DUF1480 domain-containing protein	NA	NA	NA	NA
AYL75834.1\|2104819_2105011_+	DUF1482 domain-containing protein	NA	NA	NA	NA
AYL75835.1\|2105011_2105653_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.7e-56	50.5
2105805:2105832	attL	NA	NA	NA	NA
AYL75836.1\|2106400_2106910_+	sugar O-acetyltransferase	NA	NA	NA	NA
AYL78444.1\|2107089_2107581_-	hypothetical protein	K7PM75	Enterobacteria_phage	1.8e-45	56.7
AYL75837.1\|2108190_2109135_-	hypothetical protein	H6WRW5	Salmonella_phage	8.4e-116	65.2
AYL75838.1\|2109134_2111855_-\|tail	phage tail protein	S4TTF5	Salmonella_phage	0.0e+00	92.2
AYL75839.1\|2111854_2112253_-	hypothetical protein	S4TR39	Salmonella_phage	2.7e-68	91.7
AYL75840.1\|2112259_2112844_-	hypothetical protein	S4TND4	Salmonella_phage	4.3e-102	95.4
AYL75841.1\|2112843_2113437_-	hypothetical protein	S4TSP7	Salmonella_phage	2.0e-107	94.9
AYL75842.1\|2113603_2113816_+	hypothetical protein	NA	NA	NA	NA
AYL75843.1\|2113999_2116474_-\|tail	phage tail tape measure protein	K7PM62	Enterobacteria_phage	2.8e-251	63.0
AYL75844.1\|2116529_2116817_-	hypothetical protein	NA	NA	NA	NA
AYL75845.1\|2116884_2117187_-\|tail	phage tail protein	Q9MCU7	Escherichia_phage	4.7e-28	61.6
AYL75846.1\|2117171_2117552_-\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	3.4e-44	77.4
AYL75847.1\|2117604_2118096_-\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	1.2e-62	70.8
AYL75848.1\|2118154_2118520_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	1.7e-48	69.4
AYL75849.1\|2118516_2119056_-	hypothetical protein	K7PM60	Enterobacteria_phage	1.5e-80	86.6
AYL75850.1\|2119048_2119381_-\|head,tail	head-tail adaptor protein	K7PH08	Enterobacteria_phage	1.9e-54	91.8
AYL75851.1\|2119382_2119616_-	hypothetical protein	NA	NA	NA	NA
AYL75852.1\|2119685_2120003_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	3.7e-23	53.9
AYL75853.1\|2120080_2121319_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	2.1e-154	68.0
AYL75854.1\|2121328_2121928_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.2e-91	83.0
AYL75855.1\|2121920_2123147_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	6.2e-212	86.5
AYL75856.1\|2123294_2125052_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	90.7
AYL75857.1\|2125051_2125549_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	9.7e-63	73.9
AYL75858.1\|2125705_2126056_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	3.0e-50	79.8
AYL75859.1\|2126425_2126821_-	hypothetical protein	NA	NA	NA	NA
AYL75860.1\|2126951_2127152_-	hypothetical protein	K7PM01	Enterobacterial_phage	1.6e-13	75.6
AYL75861.1\|2127108_2127378_-	hypothetical protein	G8C7W1	Escherichia_phage	4.9e-21	67.4
AYL75862.1\|2127385_2128000_-	endolysin	Q8HA86	Salmonella_phage	4.2e-92	80.9
AYL75863.1\|2128155_2128437_-\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	7.0e-18	47.1
AYL75864.1\|2128423_2128810_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	1.8e-56	91.4
AYL75865.1\|2128899_2129088_-	hypothetical protein	NA	NA	NA	NA
AYL75866.1\|2129310_2129817_-	hypothetical protein	NA	NA	NA	NA
AYL75867.1\|2129828_2130125_-	hypothetical protein	NA	NA	NA	NA
AYL75868.1\|2130337_2131168_-	antitermination protein	A0A1B5FPA5	Escherichia_phage	6.6e-56	42.8
AYL75869.1\|2131185_2132226_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.3e-98	50.6
AYL75870.1\|2132222_2132582_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	6.1e-43	66.1
AYL75871.1\|2132584_2132785_-	hypothetical protein	H6WRY8	Salmonella_phage	1.9e-17	63.1
AYL75872.1\|2132914_2133160_-	hypothetical protein	H6WRY6	Salmonella_phage	8.5e-20	63.0
AYL75873.1\|2133205_2133439_-	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	2.5e-37	97.4
AYL78445.1\|2134049_2134493_+	hypothetical protein	NA	NA	NA	NA
AYL78446.1\|2134716_2134866_-	DNA-binding protein	NA	NA	NA	NA
AYL75874.1\|2135193_2135574_+	hypothetical protein	NA	NA	NA	NA
AYL75875.1\|2135817_2135931_-	hypothetical protein	A0A192Y6E0	Salmonella_phage	2.2e-07	71.4
AYL75876.1\|2136549_2136750_-	hypothetical protein	NA	NA	NA	NA
AYL75877.1\|2136754_2136949_-	hypothetical protein	NA	NA	NA	NA
AYL78447.1\|2136945_2137284_-	DUF977 domain-containing protein	H6WRX9	Salmonella_phage	1.0e-15	46.7
AYL75878.1\|2137289_2137706_-	PerC family transcriptional regulator	NA	NA	NA	NA
AYL75879.1\|2137721_2138312_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-67	75.8
AYL78448.1\|2139342_2139897_-	hypothetical protein	M9NZI6	Enterobacteria_phage	1.4e-14	33.5
AYL75880.1\|2139900_2140113_-	XRE family transcriptional regulator	A0A077K9X2	Edwardsiella_phage	3.8e-16	59.7
AYL75881.1\|2140218_2140599_+	transcriptional regulator	K7PH71	Enterobacterial_phage	6.5e-19	66.7
AYL78449.1\|2141091_2141418_+	transcriptional regulator	NA	NA	NA	NA
AYL75882.1\|2141559_2144031_+	exonuclease	K7P6V4	Enterobacteria_phage	1.6e-110	38.0
AYL75883.1\|2144076_2144355_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.9e-12	40.3
AYL75884.1\|2144332_2145412_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	2.1e-110	55.6
2145543:2145570	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2231421 : 2263998

Enterobacterial_phage(30.23%)

integrase,capsid,holin,protease,tail,terminase,head

attL 2223210:2223269|attR 2264057:2264180

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2223210:2223269	attL	NA	NA	NA	NA
AYL75966.1\|2231421_2231820_-	hypothetical protein	S4TR39	Salmonella_phage	2.7e-68	91.7
AYL75967.1\|2231826_2232411_-	hypothetical protein	S4TND4	Salmonella_phage	4.3e-102	95.4
AYL75968.1\|2232410_2233004_-	hypothetical protein	S4TSP7	Salmonella_phage	2.0e-107	94.9
AYL75969.1\|2233170_2233383_+	hypothetical protein	NA	NA	NA	NA
AYL75970.1\|2233566_2236041_-\|tail	phage tail tape measure protein	K7PM62	Enterobacteria_phage	5.4e-247	62.4
AYL75971.1\|2236115_2236634_-	hypothetical protein	NA	NA	NA	NA
AYL75972.1\|2236663_2236834_-	hypothetical protein	NA	NA	NA	NA
AYL75973.1\|2236896_2237199_-\|tail	phage tail protein	Q9MCU7	Escherichia_phage	8.0e-28	61.2
AYL75974.1\|2237183_2237564_-\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	1.0e-43	76.6
AYL75975.1\|2237616_2238108_-\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	2.8e-62	70.8
AYL75976.1\|2238166_2238532_-	hypothetical protein	A0A286S1R1	Klebsiella_phage	3.2e-47	68.6
AYL75977.1\|2238528_2239068_-	hypothetical protein	K7PM60	Enterobacteria_phage	2.2e-81	87.7
AYL75978.1\|2239060_2239393_-\|head,tail	head-tail adaptor protein	K7PH08	Enterobacteria_phage	4.2e-54	90.9
AYL75979.1\|2239394_2239607_-	hypothetical protein	K7PGR0	Enterobacteria_phage	1.2e-14	71.4
AYL75980.1\|2239675_2239996_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	4.1e-14	38.8
AYL75981.1\|2239992_2240241_-	hypothetical protein	NA	NA	NA	NA
AYL75982.1\|2240279_2241488_-\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	1.1e-187	82.7
AYL75983.1\|2241501_2242155_-\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.3e-104	85.5
AYL75984.1\|2243369_2243555_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	2.9e-12	57.6
AYL75985.1\|2243565_2245323_-\|terminase	terminase	A0A1B5FP96	Escherichia_phage	0.0e+00	89.7
AYL75986.1\|2245322_2245820_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	3.3e-63	74.5
AYL75987.1\|2245976_2246327_-	HNH endonuclease	K7PHK9	Enterobacteria_phage	1.7e-50	79.3
AYL75988.1\|2246314_2246530_-	hypothetical protein	NA	NA	NA	NA
AYL75989.1\|2246745_2247096_+	hypothetical protein	NA	NA	NA	NA
AYL75990.1\|2247151_2247382_-	hypothetical protein	NA	NA	NA	NA
AYL75991.1\|2247359_2247566_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.9e-18	80.4
AYL75992.1\|2247522_2247792_-	hypothetical protein	G8C7W1	Escherichia_phage	1.7e-21	70.1
AYL75993.1\|2247799_2248426_-	endolysin	F1C591	Cronobacter_phage	4.6e-86	74.4
AYL75994.1\|2248425_2248707_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.2e-39	88.2
AYL75995.1\|2248693_2249089_-	hypothetical protein	K7PHB9	Enterobacterial_phage	2.6e-50	81.7
AYL75996.1\|2249227_2249854_+	hypothetical protein	NA	NA	NA	NA
AYL75997.1\|2249926_2250505_-	hypothetical protein	A0A0U2S606	Escherichia_phage	7.8e-48	56.1
AYL75998.1\|2250519_2251509_-	hypothetical protein	K7PJS6	Enterobacterial_phage	2.0e-144	71.7
AYL75999.1\|2251505_2252231_-	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	1.7e-55	52.7
AYL76000.1\|2252247_2252637_-	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	1.6e-60	88.1
AYL76001.1\|2252636_2252855_-	hypothetical protein	NA	NA	NA	NA
AYL76002.1\|2252851_2253511_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	9.7e-95	76.8
AYL76003.1\|2253510_2253954_-	hypothetical protein	U5P0U0	Shigella_phage	6.3e-13	31.1
AYL76004.1\|2253956_2254877_-	transcriptional regulator	K7PLZ7	Enterobacterial_phage	6.2e-63	85.2
AYL76005.1\|2254839_2255046_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.2e-14	67.9
AYL76006.1\|2255286_2255751_-	hypothetical protein	K7PJS5	Enterobacterial_phage	5.8e-70	90.1
AYL76007.1\|2255770_2255974_-	hypothetical protein	K7PHB1	Enterobacterial_phage	2.8e-24	83.1
AYL76008.1\|2256073_2256730_+	LexA family transcriptional repressor	K7PLZ5	Enterobacterial_phage	6.7e-104	82.6
AYL76009.1\|2258057_2258417_+	hypothetical protein	K7PJS4	Enterobacterial_phage	2.4e-39	72.9
AYL76010.1\|2258416_2259457_+	chromosome partitioning protein ParB	K7PKM7	Enterobacterial_phage	2.3e-162	87.5
AYL76011.1\|2260054_2260264_+	hypothetical protein	NA	NA	NA	NA
AYL76012.1\|2260263_2260860_+	hypothetical protein	S4TNP2	Salmonella_phage	1.1e-12	47.2
AYL76013.1\|2260861_2261281_+	HNH endonuclease	E7EKU5	Edwardsiella_phage	4.6e-58	72.6
AYL76014.1\|2261610_2262060_+	hypothetical protein	G5DA83	Enterobacteria_phage	3.5e-43	86.7
AYL76015.1\|2262056_2262446_+	chromosome partitioning protein ParB	S4TTI6	Salmonella_phage	9.9e-55	77.3
AYL76016.1\|2262448_2262727_+	hypothetical protein	K7PKM4	Enterobacterial_phage	2.8e-19	56.2
AYL76017.1\|2262760_2262988_+	DUF4224 domain-containing protein	K7PHA0	Enterobacterial_phage	4.6e-36	88.0
AYL76018.1\|2262987_2263998_+\|integrase	integrase	K7PLZ2	Enterobacterial_phage	6.1e-173	86.9
2264057:2264180	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2433915 : 2443493

Bacillus_phage(28.57%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL76179.1\|2433915_2435319_+	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	3.9e-32	29.6
AYL76180.1\|2435315_2436038_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	9.2e-30	32.7
AYL76181.1\|2436173_2436506_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AYL76182.1\|2436665_2438027_+	U32 family peptidase	Q6DW11	Phage_TP	5.3e-204	92.9
AYL76183.1\|2438296_2440573_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-164	42.1
AYL76184.1\|2440603_2440924_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
AYL76185.1\|2441247_2441472_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
AYL76186.1\|2441546_2443493_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.4e-40	41.8

DBSCAN-SWA_5

2481739 : 2490158

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL76220.1\|2481739_2483773_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	4.0e-54	27.6
AYL76221.1\|2483979_2484438_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	5.1e-50	68.0
AYL78459.1\|2484480_2484951_-	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	4.9e-64	76.9
AYL76222.1\|2484997_2485717_-	two-component system response regulator YehT	NA	NA	NA	NA
AYL76223.1\|2485713_2487399_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-281	91.6
AYL76224.1\|2487624_2488356_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.8e-105	93.5
AYL76225.1\|2488407_2488515_+	hypothetical protein	NA	NA	NA	NA
AYL76226.1\|2488495_2489227_-	ABC transporter permease	NA	NA	NA	NA
AYL76227.1\|2489210_2490158_-	ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.0e-08	25.8

DBSCAN-SWA_6

2940195 : 3033906

Salmonella_phage(70.83%)

integrase,tRNA,plate,capsid,tail,head,portal

attL 2999996:3000041|attR 3035050:3035095

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYL76610.1\|2940195_2940933_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA
AYL76611.1\|2941063_2942392_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.5e-41	29.1
AYL76612.1\|2943506_2943890_-	autonomous glycyl radical cofactor GrcA	A0A1W5N098	Cronobacter_phage	3.6e-33	70.9
AYL76613.1\|2944207_2944897_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	7.9e-55	49.3
AYL76614.1\|2944930_2946010_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AYL76615.1\|2946217_2946637_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	8.3e-15	36.5
AYL76616.1\|2946706_2947405_+	DTW domain-containing protein	NA	NA	NA	NA
AYL76617.1\|2947441_2950102_+	protein lysine acetyltransferase	NA	NA	NA	NA
AYL76618.1\|2950216_2951572_+	phosphatidylserine synthase	NA	NA	NA	NA
AYL78477.1\|2951616_2951940_+	hypothetical protein	NA	NA	NA	NA
AYL76619.1\|2951936_2953235_-	MFS transporter	Q6JIH2	Burkholderia_virus	4.1e-44	31.1
AYL76620.1\|2958682_2958964_+	hypothetical protein	NA	NA	NA	NA
AYL76621.1\|2959065_2961639_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	1.5e-127	35.2
AYL76622.1\|2961768_2962500_-	laccase domain-containing protein	NA	NA	NA	NA
AYL76623.1\|2962496_2963477_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AYL76624.1\|2963608_2964346_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AYL76625.1\|2964615_2964954_+	ribosomal subunit interface protein	NA	NA	NA	NA
AYL76626.1\|2965204_2966365_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AYL76627.1\|2966461_2967583_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AYL76628.1\|2967593_2968664_-	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.5e-89	50.9
AYL76629.1\|2968878_2969253_+	hypothetical protein	NA	NA	NA	NA
AYL76630.1\|2969411_2969930_+	DUF4154 domain-containing protein	NA	NA	NA	NA
AYL76631.1\|2969922_2971149_+	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	1.1e-06	37.6
AYL76632.1\|2971161_2971644_+	hypothetical protein	NA	NA	NA	NA
AYL76633.1\|2971775_2972123_-	50S ribosomal protein L19	NA	NA	NA	NA
AYL76634.1\|2972162_2972930_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AYL76635.1\|2972974_2973523_-	ribosome maturation factor RimM	NA	NA	NA	NA
AYL76636.1\|2973541_2973790_-	30S ribosomal protein S16	NA	NA	NA	NA
AYL76637.1\|2974039_2975401_-	signal recognition particle protein	NA	NA	NA	NA
AYL76638.1\|2975566_2976358_+	inner membrane protein YpjD	NA	NA	NA	NA
AYL76639.1\|2976376_2977666_+	magnesium/cobalt efflux protein	NA	NA	NA	NA
AYL76640.1\|2977715_2978309_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AYL76641.1\|2978305_2978500_-	molecular chaperone GrpE	NA	NA	NA	NA
AYL76642.1\|2978431_2979310_+	NAD(+) kinase	NA	NA	NA	NA
AYL76643.1\|2979395_2981057_+	DNA repair protein RecN	NA	NA	NA	NA
AYL76644.1\|2981206_2981551_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AYL76645.1\|2981591_2981897_-	RnfH family protein	NA	NA	NA	NA
AYL76646.1\|2981880_2982336_-	ubiquinone-binding protein	NA	NA	NA	NA
AYL78478.1\|2982478_2982961_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.2e-28	46.8
AYL76647.1\|2983544_2994740_+	large repetitive protein	NA	NA	NA	NA
AYL76648.1\|2994840_2996250_+	type I secretion protein TolC	NA	NA	NA	NA
AYL76649.1\|2996246_2998433_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	3.2e-17	29.8
AYL78479.1\|2998440_2999604_+	secretion protein HlyD	NA	NA	NA	NA
2999996:3000041	attL	NA	NA	NA	NA
AYL76650.1\|3000156_3000375_-	levansucrase regulator	Q53ZE7	Salmonella_virus	2.1e-38	100.0
AYL76651.1\|3000443_3001544_-	late control protein D	E5G6Q3	Salmonella_phage	9.3e-191	95.4
AYL76652.1\|3001540_3002026_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.5e-65	96.9
AYL76653.1\|3005079_3005199_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	6.7e-15	97.4
AYL76654.1\|3005213_3005516_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.2e-43	94.0
AYL76655.1\|3005570_3006086_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	1.3e-91	98.2
AYL76656.1\|3006095_3007268_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.5e-210	94.1
AYL76657.1\|3007490_3008417_+	acyltransferase	NA	NA	NA	NA
AYL76658.1\|3008393_3008825_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.3e-31	46.7
AYL76659.1\|3010370_3010976_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	6.6e-114	97.0
AYL76660.1\|3010968_3011877_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	5.6e-149	94.0
AYL76661.1\|3011863_3012223_-\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	5.2e-58	95.0
AYL76662.1\|3012219_3012798_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.3e-106	96.9
AYL78480.1\|3012901_3013495_+	hypothetical protein	NA	NA	NA	NA
AYL76663.1\|3013528_3013975_-	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	2.4e-60	85.8
AYL76664.1\|3013967_3014399_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	2.1e-69	90.9
AYL76665.1\|3014361_3014565_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	2.8e-29	95.5
AYL76666.1\|3014494_3014917_-	hypothetical protein	A0A1S6KZX8	Salmonella_phage	4.0e-49	78.6
AYL76667.1\|3014913_3015429_-	lysozyme	E5G6N1	Salmonella_phage	1.3e-75	79.4
AYL76668.1\|3015409_3015625_-	hypothetical protein	E5G6N0	Salmonella_phage	8.5e-32	97.2
AYL76669.1\|3015628_3015832_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	6.5e-34	98.5
AYL76670.1\|3015831_3016296_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	7.9e-83	96.8
AYL76671.1\|3016389_3017040_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-114	99.1
AYL76672.1\|3017043_3018108_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	1.7e-194	98.0
AYL76673.1\|3018124_3018958_-\|capsid	capsid scaffolding protein	E5G6M5	Salmonella_phage	1.2e-126	87.7
AYL76674.1\|3019100_3020867_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	96.3
AYL76675.1\|3020863_3021925_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.8e-181	89.5
AYL76676.1\|3021980_3022652_-	hypothetical protein	NA	NA	NA	NA
AYL76677.1\|3023163_3023940_-	hypothetical protein	NA	NA	NA	NA
AYL76678.1\|3023950_3024370_-	ASCH domain-containing protein	NA	NA	NA	NA
AYL76679.1\|3024381_3024930_+	AAA family ATPase	NA	NA	NA	NA
AYL76680.1\|3024939_3025311_-	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.1e-29	48.4
AYL76681.1\|3025288_3025870_-	hypothetical protein	NA	NA	NA	NA
AYL76682.1\|3025870_3026341_-	GNAT family N-acetyltransferase	Q6SE88	Lactobacillus_prophage	5.4e-23	41.3
AYL76683.1\|3026722_3026890_-	hypothetical protein	A0A1S6L006	Salmonella_phage	6.8e-21	94.5
AYL76684.1\|3027051_3029460_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	93.8
AYL76685.1\|3029450_3030308_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.5e-127	79.3
AYL76686.1\|3030304_3030532_-	hypothetical protein	A0A1S6L007	Salmonella_phage	3.1e-32	88.0
AYL76687.1\|3030531_3030765_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	3.7e-33	97.4
AYL76688.1\|3030832_3031174_-	hypothetical protein	A0A1S6L019	Salmonella_phage	4.6e-56	99.1
AYL76689.1\|3031137_3031338_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.0e-31	95.5
AYL76690.1\|3031345_3031855_-	hypothetical protein	A0A1S6L008	Salmonella_phage	2.8e-89	99.4
AYL76691.1\|3031887_3032130_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	2.3e-38	98.8
AYL76692.1\|3032249_3032882_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	2.2e-112	96.2
AYL76693.1\|3032883_3033906_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.1e-193	95.0
3035050:3035095	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage