CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	2 crisprs	WYL,RT,DEDDh,csa3,cas3,DinG	1	0	6	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP022561_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022561_1

702843-702937

Orphan

Consensus_repeat	Method
ATACAGATTTCAGCCAGTAATCGGTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022561_1

>merge|CP022561|1|702843-702937|CRISPRCasFinder
ATACAGATTTCAGCCAGTAATCGGTGCGTGTAGGAGCGGGTTCACCCGCGAAAGGGCCGCAGAAGCCCATACAGATTTCAGCCAGTAATCGGTGC

>CP022561|1|1|702843-702937|CRISPRCasFinder
ATACAGATTTCAGCCAGTAATCGGTGC	GTGTAGGAGCGGGTTCACCCGCGAAAGGGCCGCAGAAGCCC
ATACAGATTTCAGCCAGTAATCGGTGC

Protein	Signature genes	Signature genes Name	Protein_function
CP022561.1\|AYN08891.1\|711476_711707_-\|hypothetical-protein	unknown	unknown	unknown
CP022561.1\|AYN08880.1\|701235_701625_+\|pilus-assembly-protein-PilE	unknown	unknown	gnl\|CDD\|227303
CP022561.1\|AYN08888.1\|709151_710354_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380668
CP022561.1\|AYN08883.1\|704330_705608_-\|Zn-dependent-hydrolase	unknown	unknown	gnl\|CDD\|237250
CP022561.1\|AYN08874.1\|697887_698325_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223976
CP022561.1\|AYN08890.1\|711268_711532_-\|hypothetical-protein	unknown	unknown	unknown
CP022561.1\|AYN08885.1\|706452_707205_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213186
CP022561.1\|AYN08872.1\|694555_697387_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
CP022561.1\|AYN08877.1\|699955_700138_+\|prepilin-type-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|131575
CP022561.1\|AYN08892.1\|711801_712821_-\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|274513
CP022561.1\|AYN08889.1\|710444_711209_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
CP022561.1\|AYN08876.1\|699363_699846_-\|type-IV-pili-biogenesis-protein-FimT	unknown	unknown	gnl\|CDD\|378793
CP022561.1\|AYN08886.1\|707204_708224_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
CP022561.1\|AYN08887.1\|708225_709086_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
CP022561.1\|AYN08875.1\|698339_699287_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP022561.1\|AYN08884.1\|705757_706453_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213191
CP022561.1\|AYN08879.1\|700769_701234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227070
CP022561.1\|AYN08873.1\|697379_697895_+\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
CP022561.1\|AYN08881.1\|701679_702777_+\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|274092
CP022561.1\|AYN08878.1\|700134_700773_+\|pilus-assembly-protein-PilW	unknown	unknown	gnl\|CDD\|227301

Protein	Function_ID	Function_description	E-value
CP022561.1\|AYN08880.1\|701235_701625_+\|pilus-assembly-protein-PilE	gnl\|CDD\|227303	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion].	8.22459e-21
CP022561.1\|AYN08888.1\|709151_710354_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380668	cd20378, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins. Periplasmic substrate-binding domain of active transport proteins found in bacteria and Archaea. Members of this group are initial receptors in the process of active transport across cellular membrane, but their substrate specificities are not known in detail. However, they closely resemble the group of AmiC and active transport systems for short-chain amides and urea (FmdDEF), and thus are likely to exhibit a ligand-binding mode similar to that of the amide sensor protein AmiC from Pseudomonas aeruginosa. Moreover, this binding domain has high sequence identity to the family of hydrophobic amino acid transporters (HAAT), and thus it may also be involved in transport of amino acids.	0
CP022561.1\|AYN08883.1\|704330_705608_-\|Zn-dependent-hydrolase	gnl\|CDD\|237250	PRK12893, PRK12893, Zn-dependent hydrolase.	0
CP022561.1\|AYN08874.1\|697887_698325_+\|peptidylprolyl-isomerase	gnl\|CDD\|223976	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones].	2.3483e-49
CP022561.1\|AYN08885.1\|706452_707205_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	5.3197e-111
CP022561.1\|AYN08872.1\|694555_697387_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
CP022561.1\|AYN08877.1\|699955_700138_+\|prepilin-type-cleavage/methylation-domain-containing-protein	gnl\|CDD\|131575	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV. Pilus systems categorized as type IV pilins differ greatly from one another, with some showing greater similarty to type II or type III secretion systems than to each other. Members of this protein family represent the PilV protein of type IV pilus systems as found in Pseudomonas aeruginosa PAO1, Pseudomonas syringae DC3000, Neisseria meningitidis MC58, Xylella fastidiosa 9a5c, etc. [Cell envelope, Surface structures, Protein fate, Protein modification and repair].	3.86903e-07
CP022561.1\|AYN08892.1\|711801_712821_-\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	4.45117e-100
CP022561.1\|AYN08889.1\|710444_711209_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.14297e-36
CP022561.1\|AYN08876.1\|699363_699846_-\|type-IV-pili-biogenesis-protein-FimT	gnl\|CDD\|378793	pfam12019, GspH, Type II transport protein GspH. GspH is involved in bacterial type II export systems. Like all pilins, GspH has an N-terminus alpha helix. This helix is followed by nine beta strands forming two beta sheets, one of five antiparallel strands and one of four antiparallel strands. GspH is a minor pseudopilin; it is expressed much less than other pseudopilins in the type II secretion pilus (major pilins). The function and localization of minor pseudo-pilins are still to be fully unraveled. It has been suggested that some minor pseudopilins may assemble either into the base or the tip of pili, or both. They function as initiators or regulators of pilus biogenesis and dynamics, and/or as adaptors between various pseudopilin component and other members of the T2SS.	7.03018e-10
CP022561.1\|AYN08886.1\|707204_708224_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	2.85239e-77
CP022561.1\|AYN08887.1\|708225_709086_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	4.0484e-67
CP022561.1\|AYN08875.1\|698339_699287_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
CP022561.1\|AYN08884.1\|705757_706453_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213191	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter. LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.	1.36325e-111
CP022561.1\|AYN08879.1\|700769_701234_+\|hypothetical-protein	gnl\|CDD\|227070	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion].	2.34784e-10
CP022561.1\|AYN08873.1\|697379_697895_+\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	1.22904e-70
CP022561.1\|AYN08881.1\|701679_702777_+\|glycine-oxidase-ThiO	gnl\|CDD\|274092	TIGR02352, Glycine_oxidase, glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	2.12639e-71
CP022561.1\|AYN08878.1\|700134_700773_+\|pilus-assembly-protein-PilW	gnl\|CDD\|227301	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion].	4.63724e-13

>CP022561.1|AYN08881.1|701679_702777_+|glycine-oxidase-ThiO
MSKQVVVVGGGVIGLLTAFNLAAKVGQVVVCDQGEVGRESSWAGGGIVSPLYPWRYSAAVTALAHWSQDFYPQLGERLFASTGVDPEVHTTGLYWLDLDDEAEALAWATREQRPLSAVDISAAYDAVPVLGPGFKHAIYMAGVANVRNPRLVKSLKAALLALPNVTLREHCQITGFVQEKGRVTGVQTADGVLAADEVVLSAGAWSGDLLRTLGLELPVEPVKGQMILFKCAEDFLPSMVLAKGRYAIPRRDGHILVGSTLEHAGYDKTPTGDALESLKASAVELLPELEGATVVAHWAGLRPGSPEGIPYIGPVPGHEGLWLNCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGRLG
>CP022561.1|AYN08880.1|701235_701625_+|pilus-assembly-protein-PilE
MQQGLSLIELLIVLAVTGILAAIAYPSYSDQLRRAARSEVVGLLHDAALRLERHRVRTGQYAEGDLVLPEGTRYYSLQAQRDSDTFTLRARRLPHGLMAQDGCGDFQLDQAGMQRNPGAVEHSTHCWGS
>CP022561.1|AYN08879.1|700769_701234_+|hypothetical-protein
MNRQRGVVLLLALVLSVLLGLLATSALRDALVETRMTGYLSDGLLALEEAEATLLAGERELERAPPDVCNACLPPPRPHDLVGQWQGTQTGFFQLQNLGVSKRAAHMPEGQPVSLFRITAVSKQSRSRHVLEAVYAVAGNQTQRITWRQRLRGD
>CP022561.1|AYN08878.1|700134_700773_+|pilus-assembly-protein-PilW
MRRCQAGFGLLEMVVALAIGLMLLAAASQLFVSAHQTWRLQSTAVRMQDSARLALLRMAQDIRMAGMFGCLRLSPDDFLVSGAEQAFARPLASGPSSLSLVVAELPGYAGDPDWTLLTNCINTVEVHKERAQGSDTLMAVPVSRHRYAHVGSTLYFERRGRNQPLVDHVRELRVVQVAGERIDLQLTLYEPTLQLEQHHALSVALRNPVPAS
>CP022561.1|AYN08877.1|699955_700138_+|prepilin-type-cleavage/methylation-domain-containing-protein
MHARQGGMTLLEVLLAIVIVAAGLFATAAMQLQALQAADSARRDGQAAMALHSEHERRRR
>CP022561.1|AYN08876.1|699363_699846_-|type-IV-pili-biogenesis-protein-FimT
MKQRGVTLIQMLSALAVAVLLTQLGMPAYARMSDDLHRAAAARDLAQALRSARSHAMLQSQPVLVLALDGNWGNGWRVVLEHNRQVLREQRLSKPLKITSNRGEQFKFSALGVPMTSGNSWLGATLEMCERAAARSRYQVALASSGRVRLLTEDRSNDRC
>CP022561.1|AYN08875.1|698339_699287_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQIKLANPRGFCAGVDRAIEIVNRALEVFGPPIYVRHEVVHNKFVVEDLRNRGAIFVEELDQVPDDVIVIFSAHGVSQAVRQEAAGRGLKVFDATCPLVTKVHIEVAKYSRDGRECILIGHEGHPEVEGTMGQYDASNGGAIYLVEDEEDVANLQVRDPNHLAFVTQTTLSMDDTSRVIDALRARFPNIGGPRKDDICYATQNRQDAVKQLAGESDVVLVVGSPNSSNSNRLRELAERMGTPAYLIDGAEDMQRGWFDQTARIGITAGASAPEVLVRGVIEQLKAWGATGAEELDGREENITFSMPKELRVRSLI
>CP022561.1|AYN08874.1|697887_698325_+|peptidylprolyl-isomerase
MTDTRIGQNTEVTLHFALHLENGDTVDSTFDKAPATFKVGDGNLLPGFENALFGFKAGDKRTVVVAPENAFGQPNPQNVQVMPRSNFEGMELSEGLLIIFNDAANTELPGVVKAFDDDQVTIDFNHPLAGKTLTFEVEILEVKAL
>CP022561.1|AYN08873.1|697379_697895_+|lipoprotein-signal-peptidase
MPNPAAGRFGRLAWLWLSLLVLVIDQATKLYFNNALTMYQQIVVIPDYFSWTLAYNTGAAFSFLADGAGWQRWLFALIAVVVSAVLVVWLKRLGRNETWLAVALALVLGGAIGNLYDRIVLGHVVDFILVHWQNRHYFPAFNVADSAITVGAVMLALDMFKSKKSEDPVHD
>CP022561.1|AYN08872.1|694555_697387_+|isoleucine--tRNA-ligase
MTDYKATLNLPDTAFPMKAGLPQREPQILQRWDSIGLYQKLREIGKDRPKFVLHDGPPYANGKIHIGHALNKILKDMIVRSKTLAGFDAPYVPGWDCHGLPIEHKVEVTHGKHLSADRTRELCREYAAEQIEGQKTEFIRLGVLGDWDNPYKTMNFANEAGEIRALAEMVKQGFVFKGLKPVNWCFDCGSALAEAEVEYADKKSQTIDVAFPVADEAKLAAAFGLASLTKPAAIVIWTTTPWTIPANQALNIHPEFKYALVDTGERLLVLAEELVESCLKRYNLEGSVVATAQGSALELINFRHPFYDRLSPIYLADYVELGAGTGVVHSSPAYGEDDFVTCKRYGMVNDDILTPVQSNGVYVESLPFFGGQFIWKANPAIVEKLSEVGALMHTETISHSYMHCWRHKTPLIYRATAQWFVGMDKQPSTGEPLRERALKAIEDTKFVPAWGQARLHAMIANRPDWCISRQRNWGVPIPFFLHKQTGELHPRTVELMEEVAKRVEQQGIEAWFKLDAAELLGAEADQYDKIADTLDVWFDSGTTHWHVLRGSHDIGHATGPRADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRELLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLGADILRLWVSATDYSGEMAVSEQILQRSADAYRRIRNTARFLLSNLSGFDPARDLLASEDMLALDRWAVDRTLLLQRELEEHYSEYRFWNVYSKVHNFCVQELGGFYLDIIKDRQYTTGANSVARRSCQTALFHISEALVRWIAPILAFTADEIWQYLPGERNESVMLNGWYEGLSELPEGTELGRAYWDRVMAVKASVNKELENQRTAKVIGGNLQAEVTLYADEGLSADLGKLGDELRFVLITSAASVVPFAQAPAEAVATEVEGLKLKVVKSGHAKCGRCWHFRADVGSHPEHPEICSRCVDNLSGQGEVRHYA
>CP022561.1|AYN08883.1|704330_705608_-|Zn-dependent-hydrolase
MNTRIDPSQHLLGQGPLVSRERLWQSLMDLAQLGATAKGGVCRLALTDLDRQARDLFVRWCEEAGCTVSIDAIGNIFARRPGRNPALAPVMTGSHIDTQPTGGKFDGCYGVMAGLEVMRTLNDLHLTTEAPLEVVVWTNEEGSRFPPCMMGSGVFAGKFGLQETLEKIDDQGLSVGAELQRIGYAGPRVPTGHAVGAYFEAHIEQGPVLEDQRTTIGVVQGCLGQKWFDLTLTGVEAHAGPTPMHLRKDALVGAAEVVAAVNRVAHAHQPHACGTVGCLTLHPGSRNVIPGQVHMTIDLRHLDPGHLDAMVSEVRAAIENSTAKHGLSYQLTPTADFPPLYFAEQCVDAVRQGARALGLSHMDIVSGAGHDAIFLAELGPAGMIFVPCEGGISHNEIENAAPQDLADGCDVLLRAMFQAANPGAR
>CP022561.1|AYN08884.1|705757_706453_-|ABC-transporter-ATP-binding-protein
MLNVDSIHSYYDKSHVLEGVSLKVEAGELVTLLGRNGAGKTTTLRSILGIVRPRQGQISFNGQQLVGREIFDIARQGIALVPEHRGIFRQLSVEENLKIAVRKTSRWQLEDVYSMFPRLKERRHNGGFALSGGEQQMLAIARALLNGPRLLILDEPTEGLAPVIVDELVKILRRIKDEGLSILLVEQNLMVCDALADRHYVLEQGRVAYQGSAAQFREDPSIKNRYLALSA
>CP022561.1|AYN08885.1|706452_707205_-|ABC-transporter-ATP-binding-protein
MSDYLLETRQLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILFNGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSVEHKRSHWNTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGMGIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDERVRTAYLGEAA
>CP022561.1|AYN08886.1|707204_708224_-|branched-chain-amino-acid-ABC-transporter-permease
MSEKNPLPVAKGRAPALLSLVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWGGLTELGKRLLATRNADDKPQAKTKETL
>CP022561.1|AYN08887.1|708225_709086_-|branched-chain-amino-acid-ABC-transporter-permease
MLDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGRA
>CP022561.1|AYN08888.1|709151_710354_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIAEHPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPVGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKQLVAATRKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVLKDYYLLRGKPQGQMRDEDDLAEVISSGRSFVEVDHTGCALA
>CP022561.1|AYN08889.1|710444_711209_-|FadR-family-transcriptional-regulator
MLKPKRKRQKLSDVIVESVKRSIVTEALHPGDRLPTERELMEHFECSKGTAREALKALEVEGLVSTRTGPTGGAYLNEVGTEPASRALRNYLHFQHLDGEQVYQLRKVIEVELAVSVMGKLSEADYAALQANIDFCSAPEDSEEGQREQRLAELEFHTLLADRCPNPLLRFMAVFLNDLLRDLVVLKKAYLPKRQQFAAANIGYHKQLLTALRASDEPAVRRLMHEHMCDAEHHMTALEGEVARNFLLEFDHHH
>CP022561.1|AYN08890.1|711268_711532_-|hypothetical-protein
MSGIAARPTCSRALATKAEHDVCSILKPIRNLWERACPRSRHHGVWHRLRRCSRARPLPQFLSAISCSTYPSPTLSHHLRPLPQHQH
>CP022561.1|AYN08891.1|711476_711707_-|hypothetical-protein
MVRLLFWIALIAAAFWLWRKFKVSQQSHPEAKLDAPLKMVRCAHCGVHLPNDRALQQGNEWYCSQAHLQQGPGHQG
>CP022561.1|AYN08892.1|711801_712821_-|outer-membrane-protein-assembly-factor-BamD
MRVKHLLLIAILGLTAACSSNKEVIDENLSEAELYQQAQADLDNSSYTSAVNKLKALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSLETLKLNYPDHPSLVDGEFQPKQTESDGRGWLSKATLGLIETDTPLPPGETRANQDVVKQFQDARDEMPRELLPKDENGDPIVPEGPKEAEKDRSWFSYMTFGLFD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP022561_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022561_3

5862721-5862822

Orphan

Consensus_repeat	Method
GCGGGTTTACCCGCGAAAGGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022561_3

>merge|CP022561|3|5862721-5862822|CRISPRCasFinder
GCGGGTTTACCCGCGAAAGGACCACAAAGGCCCCGTAGGTGCGGGTTACCTGCGAAAAGGCAGCAAAGGCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCC

>CP022561|3|3|5862721-5862822|CRISPRCasFinder
GCGGGTTTACCCGCGAAAGGACC	ACAAAGGCCCCGTAGGTGCGGGTTACCTGCGAAAAGGCAGCAAAGGCCCTGTAGGA
GCGGGTTTACCCGCGAAAGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP022561.1\|AYN13316.1\|5858687_5859599_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|184959
CP022561.1\|AYN13328.1\|5874447_5875374_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
CP022561.1\|AYN13320.1\|5865064_5865883_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP022561.1\|AYN13313.1\|5854912_5856700_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	unknown	unknown	gnl\|CDD\|235131
CP022561.1\|AYN13327.1\|5873000_5874395_+\|DUF1338-domain-containing-protein	unknown	unknown	gnl\|CDD\|319958
CP022561.1\|AYN13309.1\|5847338_5852387_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226415
CP022561.1\|AYN13321.1\|5865923_5866232_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225765
CP022561.1\|AYN13310.1\|5852483_5853110_-\|hydrolase	unknown	unknown	gnl\|CDD\|238494
CP022561.1\|AYN13314.1\|5857389_5857683_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371447
CP022561.1\|AYN13325.1\|5870280_5871771_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143448
CP022561.1\|AYN13322.1\|5866349_5866979_-\|hydrolase	unknown	unknown	gnl\|CDD\|238494
CP022561.1\|AYN13326.1\|5871906_5872797_+\|transcriptional-regulator-GcvA	unknown	unknown	gnl\|CDD\|176170
CP022561.1\|AYN13315.1\|5857859_5858489_-\|hydrolase	unknown	unknown	gnl\|CDD\|238494
CP022561.1\|AYN13323.1\|5867300_5868728_+\|mechanosensitive-ion-channel-protein-MscS	unknown	unknown	gnl\|CDD\|223740
CP022561.1\|AYN13319.1\|5862882_5864865_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
CP022561.1\|AYN13318.1\|5861070_5862669_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|283599
CP022561.1\|AYN13317.1\|5859806_5861069_+\|outer-membrane-porin,-OprD-family	unknown	unknown	gnl\|CDD\|335381
CP022561.1\|AYN13312.1\|5853726_5854713_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
CP022561.1\|AYN13311.1\|5853183_5853546_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP022561.1\|AYN13324.1\|5868836_5870123_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737

Protein	Function_ID	Function_description	E-value
CP022561.1\|AYN13316.1\|5858687_5859599_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|184959	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional.	9.05763e-112
CP022561.1\|AYN13328.1\|5874447_5875374_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.01002e-67
CP022561.1\|AYN13320.1\|5865064_5865883_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.54055e-43
CP022561.1\|AYN13313.1\|5854912_5856700_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
CP022561.1\|AYN13327.1\|5873000_5874395_+\|DUF1338-domain-containing-protein	gnl\|CDD\|319958	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	0
CP022561.1\|AYN13309.1\|5847338_5852387_+\|histidine-kinase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.59436e-56
CP022561.1\|AYN13321.1\|5865923_5866232_-\|hypothetical-protein	gnl\|CDD\|225765	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown].	9.32632e-08
CP022561.1\|AYN13310.1\|5852483_5853110_-\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	4.58234e-69
CP022561.1\|AYN13314.1\|5857389_5857683_+\|hypothetical-protein	gnl\|CDD\|371447	pfam11275, DUF3077, Protein of unknown function (DUF3077). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	0.00452111
CP022561.1\|AYN13325.1\|5870280_5871771_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
CP022561.1\|AYN13322.1\|5866349_5866979_-\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	1.94935e-70
CP022561.1\|AYN13326.1\|5871906_5872797_+\|transcriptional-regulator-GcvA	gnl\|CDD\|176170	cd08481, PBP2_GcdR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators GcdR-like, contains the type 2 periplasmic binding fold. GcdR is involved in the glutaconate/glutarate-specific activation of the Pg promoter driving expression of a glutaryl-CoA dehydrogenase-encoding gene (gcdH). The GcdH protein is essential for the anaerobic catabolism of many aromatic compounds and some alicyclic and dicarboxylic acids. The structural topology of this substrate-binding domain is most similar to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.70979e-99
CP022561.1\|AYN13315.1\|5857859_5858489_-\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	2.84444e-70
CP022561.1\|AYN13323.1\|5867300_5868728_+\|mechanosensitive-ion-channel-protein-MscS	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	6.59587e-26
CP022561.1\|AYN13319.1\|5862882_5864865_-\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	0
CP022561.1\|AYN13318.1\|5861070_5862669_+\|MFS-transporter	gnl\|CDD\|283599	pfam05977, MFS_3, Transmembrane secretion effector. This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.	0
CP022561.1\|AYN13317.1\|5859806_5861069_+\|outer-membrane-porin,-OprD-family	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	1.83439e-154
CP022561.1\|AYN13312.1\|5853726_5854713_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	5.163e-96
CP022561.1\|AYN13311.1\|5853183_5853546_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.20962e-29
CP022561.1\|AYN13324.1\|5868836_5870123_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	6.97533e-70

>CP022561.1|AYN13318.1|5861070_5862669_+|MFS-transporter
MSTSPSGAWSPLRNTTFRMLWIATIASNIGTWMHEVGAGWLMTTLSASPLHVALIQVAGSLPMFFLALPAGAAADIVDKRRYLLLVQLWMSCVAVVLAALTLLGMMNVTLLLVLTLALGIGTALMMPAWSALTPELVGKEDLANAVALSSVGINVSRAIGPALAGVVVSMVGPWLTFALNAISFAGVILVLFLWKREVKEPLLPAERFVGAMRTGLRFARSAKPLQAVMLRALAFFFCASAGTSLLPLIVRGEMRGTAADFGLLLAAIGIGAVAGATLLPRLRERISRDRLVLLASLLYALFLLALALVRNFYALLPAMLLSGAAWIAVLSNLQVAAQTSVPAWVRARALSVYILIFFGAMACGGLLWGTLASHATLTFSLLVAAGGLALGTLLTCKVTLPETEAEELTPSLHWPVPVLSDDMDKEVGPLMVTVEYHIAPTKAEAFQQAARELEAMRKRNGALSWGLMRDSADPALWLEFFFEESWLEHLRHHHRVTRGELKIEARVRMLQTDGVEVRIRHLLAGGEHKAHH
>CP022561.1|AYN13317.1|5859806_5861069_+|outer-membrane-porin,-OprD-family
MIRATHGPGRALLATLALWPALSHAEAPGWSLLSRNYFLHSDFRSPSGSGQNYRQEWAQGFIGEVRSGFTEGTVGVGIDAHGFLGLKLDGGRGHSGTGLLPRDSDGRAESEYSSAGAALKMQLGNTQLRYGEMMVETPVFDTGDKRLHPEYATGWWVENTDQPDWRLQAGRFTAFNNQDNSSTHDDFSGYGATTHNRAISLAGATFAPNGPFGAALYAGQLENTWRQAYLNLNVAEGNWHLDGNLYKTRDTGNASAGAIDTLAYSLLARYSFGTQALSLAYQKVEGDTPFDFVGGDAIYLANAIKYADFNGPGEHSWQLRYDLNFATLGAPGLSLMGRYVSGRGIDGSHAPAGGAYVNQYGDGGKHWERDIDLKYVVQSGAAKDLSLSFSHVSHRANQAQAGNDIDRIYLIIEYPLKGSF
>CP022561.1|AYN13316.1|5858687_5859599_+|LysR-family-transcriptional-regulator
MEDLNSLYYFTQVVEHGGFAPAGRALDMPKSKLSRRIADLEDRLGVRLLHRTSRHCSLTEIGQAYYNRCLAMRVEAEGAAEIIERNRSEPRGLVRISCPTTLLNSWVGPMLTRYMLKYPQVELFIESTNRRVDLLHEGFDIALRVRFPPLENTDMVMKVLSNSTQCLVGQPQYLAQLPKGFDPQLLGTLPSVHWGSAQREYQWELFQGEDNSRSIVIPHTPRMVTDDLFALRHFVVAGVGIAHLPRVAVREDLAAGRLVELIPDWHPRCGIVHAIFPSRRGLLPSVRALIDHLAEEFAISDMA
>CP022561.1|AYN13315.1|5857859_5858489_-|hydrolase
MSKFTYNRLNKDDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALADLAKFFNLPTILTTSFEQGPNGPLVPELKALFPDAPYIARPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALEEEFEVFVVTDASGTFNEMTRDAAHDRMSQAGAQLMTWFGVACELHRDWRNDVEGLAALCSNHIPDYRNLMTSYNALTAGK
>CP022561.1|AYN13314.1|5857389_5857683_+|hypothetical-protein
MKRIVPDPPLPNTTQRSFSRCDAGHPPLFTVNPGVSAHDALVHVAQYLRGAYDCGYKALEHLDDTGKSLFWSNLNALEMAEGLVEALLDGIESQPMN
>CP022561.1|AYN13313.1|5854912_5856700_+|glutathione-regulated-potassium-efflux-system-protein-KefB
MPHEGSLLQTAVIFLLAAVLAVPLAKRLQLGAVLGYLLAGVVIGPQALGLIRDTESVAHISELGVVLLLFIIGLELSPKRLWLMRKSVFGVGTAQVVLTGAVIGAIALFGFSQTLPAAIVLGLGLALSSTALGLQSLAESKQLNAPHGRLAFAILLFQDIAAIPLIALVPLLAASGPDTSQGDSLQHGLKVFASIAVVIIGGRYLLRPVFRTVARTGLPEVSTATALLVVIGTAWLMEEAGISMALGAFLAGLLLADSEYRHELESQIEPFKGLLLGLFFISVGMGANLRLLLEMPLVVLGLTLLLVAVKLLLLIGVGRWVGGLNSASALRLGMVLAAGGEFAFVVFKLGKDQGLFDTQTYDLLLMTITLSMAITPLLMLGCARALKRPQPAREVPEQYKQIQTDTPRVVIVGMGRMGQIVARILRAQKIPFVALETSVDTIEMTRMFEQVPVFYGDPLRPEVLHAAKVGEAEYFIITIDDPEAAIHTAARVKRLYPHLKVLARARNRQHVHKLADVGAEPIRETFYSSLEMTRRALVGLGLSDEQASDRIARFTQHDEEVLEAQGQVRDDRAKVMQTAKEARVELERLFDSDAD
>CP022561.1|AYN13312.1|5853726_5854713_+|GlxA-family-transcriptional-regulator
MQEKPAHRTVAMVLFNDVLLLDVTGPMDAFAIANRFLPAARQYRLLTLAEGQAVVRGSCGLKVVADQRLEDLPEAVDLLLVPGGPGAYDTALPGIERWLPKAARQAKRFGAICTGVFLLGRAGLLNGYRCTTHWNYVERLAQAFPEAKVETEQIYVMDRCLITSGGITAGIDLALAVVAEDHGKALALEVAKVLLVARHRQGGQTPYGPLLAAVPRDDSPIARVQAYIVDHIEQAFTVQKMAELVAMSGRNFARTFQREVGITPLQYLQNARIDRARKLLECGDLPMKVVAAQCGFGSDRHMRKVFFERIGMTPAQYRAQFGGGEQSD
>CP022561.1|AYN13311.1|5853183_5853546_-|AraC-family-transcriptional-regulator
MYPGTPEAPLQTPGALTPARLRRAKELMLHSPLSIIEIAAVCNLTRSHFSRAFKVNTGLSPQAWRLLARMEKAKRLLATEAPITHVSLECGFCDQAHFTRAFSRLVGQPPKAWRQAQVLS
>CP022561.1|AYN13310.1|5852483_5853110_-|hydrolase
MSQPDYKRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALGDLAKFFGLPTILTTSFEQGPNGPLVPELKEMFPDAPYIARPGQINAWDNEDFVKAIKATGRKQLIIAGVVTDVCVAFPTLSALAEGFEVFVVTDASGTFNETVQQAAWVRMTQAGAQMMNWFSVACELHRDWRNDIEGLGNLLSQRIPNYRNLMNSYAALASR
>CP022561.1|AYN13309.1|5847338_5852387_+|histidine-kinase
MLDERLAHRPIDYDQSIDEGWLNRCEISALGQEGELSYFRLRDPASHQAWIAVRAPLEAPSACQRLERDYRLQLDPQWAVIPSAFVRSAEGPLLVYPAGLSVADLIAEGPAALEPFLDIAVNAAHALAQAHERNALHGTLQPEHVYLRAHQRVRLGFFRADPAERISEQGTPLGNWAYLAPEQVCPHGSSSDRRSDIYALGAILYQLLVGELPLAGRDTQHWRQLHAGVQPRAASEVDSKVPPPLSLVLAKALAKEPDARYQSARAFAVDLAHCQRQWAAHKTMAPFTPGCADPVAPDHARLYGRSAEQKAIALLLKALHRDSKPQALVIYGAAGMGKSSLVKAALKANAEGYWAVGTCNSHAQAVPYTPWIEVLGALTTQLLAKNSQDLVTLRREIQRRIKGHGRLLGKLAPDLQLILGPLPQLPAKPTRLALHKELHAIIEFLQVFSRPGQPLVLFFDDLQWADDATRQLLAQLLANVPANLLLIVTQCNDTPTTSAPLAIPATVRSTTLNLRPLAVGAVTELIGERFHVAPEDAYQLAERVHGKTAGNPFFINQILRAMVEDQLFIFDTQAMRWSWCLQAVARHCYSDNVADLMVHRLERLTAPQRDLLRVVSAAGSHCDERLLRQVLAQPPGEPLKALIRAGFLQPGQNGLGCTHDRVMEAAYALTPVHERASLHARIALAMRQAWPGRTHEVLFELASQLQRASPCGFAADDCEAFLQLLREAASRARDTGAFEQAAGYLHTAEQLLHHSATLESRATHGFAVACMATECDMQLSRTIAAQARLTECRQRARSVLDQARACRLQALLYTLHGDYQAAIDSALDGLDLLGISPVRGVDWQEVDASHAHVQALIEQKDRHCLESLPRTDSEEVTVAISLLATLSSSFFVKDDICFLHLAKLMEMSLLHGVAPGSTYGMAWYGVMIAERFGAYHDGHACCLAALKLIERHGFDADLTSALLALDQVSAWTSPMEFARRTALDAVDSARLSGDLAMSCYACNHLVSDSLFMGRYLPDVVEEVAQGLATVRRHGYGDIEQILLAQQAFVANLSGTPCPAPATASRSPTTRFFQHLFAAMCAFYMGNIPKAMRDLALAGDNSWAAPAHINLADYHLFRGLALGSPEAPGSLADKLRQLQALRERFSRWAGFNPATFRSKQLLIEGVIAKLEGDGLAAIRCFDQAQIAATAAGFIHEQALAHEQLAEVCIPSGLISGANLHLRIARDCFHIWGATGKVHQLETLHPFLRTQPIQETYRATHQARLDLEAGIEAARALSEEVLLEGLIETLMGHLTQHSGADHGALLIVSGAEFQMAALAYIDDAGLHVSMDNCQKFMTQAPLSVINTTMRTRKPLVLNDALSECPEAFRQQLQARNARSVLCLPLVIQGVLIGLVYLENRLVPNLFGGQRLAMLEILASQAAVSLQTAKFYTRLAEENQIRAQMEAELRRSRAELARSAHLQAMNELSASIAHEISQPLLGIASNAAASLRWLKRPNPDLEEAIAGLEDIRNDSERAGNIVRALRSLAKQSPMQLKAVKLDELIREVVRLTSADAAKGKVDVQTQLKAGVCVTADPVQLQQLVFNLITNALEALSGYRSDGVLKIASAVVEDGVEVCVDDNGPGIAADERERVFDAFHSTKTGGMGMGLAICSSVAQAHGGQLQALVSQLGGCRIRFSLPVRHA
>CP022561.1|AYN13319.1|5862882_5864865_-|amidohydrolase
MSQDRNDKTRRQFLATSTVLGAAGALWSALPFTGQAGSAHASTQGGSMTADLILFNGKLHTVDREKPTATAVAIKDGRFIAVGSDAEAMAHKGAATQIIDLKQRTVIPGLNDSHLHLIRGGLNYNLELRWEGVPSVADALRMLKDQAARTPTPQWVRVVGGWNEFQFAEKRMPTLEEINQAAPDTPVFLLHLYDRALLNRAALKAVGYDKSTPNPPGGEIQRDKFGNPTGMLIARPNAMILYATLAKGPKLPLEYQVNSTRQFMRELNRLGLTSAIDAGGGYQNFPDDYSVIQELADNNQLTVRIAYNLFTQKPKEELDDFKKWTSSVKLHSGTDFLRHNGAGEMLVFSAADFEDFLEPRPDLPQTMEEELEPVVRHLVEQRWPFRLHATYNESITRMLDVFEKVNRDIPFNGLPWFFDHAETITPQNIERVRALGGGIAIQDRMAFQGEYFVDRYGAKAAEQTPPIKRMLEMGVPVGAGTDATRVSSYNPWTSLYWLVSGKTVGGMELYPEGLSRDTALQLFTQGSAWFSSEQGKKGQIKVGQLADLAALSLDFFSVDEEAIKGIESVLTIVDGKVVYGAGEFDKLGPPQVPVLPEWSPVTKVPGHWRVGTPSLAAAVHQCSGPCGVHAHSHDKARKSSVPVNDFQGFWGALGCSCFAF
>CP022561.1|AYN13320.1|5865064_5865883_-|alpha/beta-hydrolase
MSTFVTRDGTSIYFKDWGSGKPVLFSHGWPLDADMWDSQMEFLASRGYRAIAFDRRGFGRSSQPWNGYDYDTFADDIAQLIEHLDLRDVTLVGFSMGGGDVSRYIARHGSERVAGLVLLGAVTPVFGKREDNPDGVDLSVFEGIQAGLRADRAQFIADFATPFYGLNHGQQVSQGVQTQTLNIALMASIKGTLDCVTAFSETDFRPDMAKVDVPTLVIHGDDDQIVPFETTGKQAAELIRGAELKVYAGAPHGFAVTHAQQLNEDLLAFLQR
>CP022561.1|AYN13321.1|5865923_5866232_-|hypothetical-protein
MNTALHDNREVVTVCLQHKVLDSSPGTPAAQPPRWKQALLTYLVICPMTMVIPQLLAPLFARFPQLGGVITGNLIVNLFVILPVVFYIMPWVTRRCANWLRG
>CP022561.1|AYN13322.1|5866349_5866979_-|hydrolase
MTHFKYNRLNKDDAAVLLVDHQAGLLSLVRDIEPDAFKNNVLALADLAKFFNLPTILTTSFEQGPNGPLVPELKALFPDAPYIARPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALEEEFDVFVVTDASGTFNAMTRDAAHDRMSQAGAQLMTWFGVACELHRDWRNDIEGLAALCSNHIPDYRNLMTSYNAFNANK
>CP022561.1|AYN13323.1|5867300_5868728_+|mechanosensitive-ion-channel-protein-MscS
MLAFIQSSPLLLGCALILLDLVLWQLIPIQRHAWRISARLVIFLLFSAVLMAAGMSPLQPPPWPDDLSRNLMATVLAIGWWLFGARTVTVVFGLLLVARGSHGGRLLQDVLGALIFLAAVVAAAGYVLQLPVKGLLATSGVMAIVIGLALQSTLADVFSGIVLNTTRPYQIGDSISIDGTEGKVLDIDWRATRLLTGTGSLAVIPNSVAAKARLLNHSRPADVHGVSISVVVPAKVRPKRVFDALEKALQGVSAILATPKPKVTVKASTLESVEYEASGFVADAGTKGDARNQLFDLAHRHLEASGVMWNVDLAVPPRSRQREVLDEVRVFRSLSDEERDALSQRMTAVEYLADQVILEVGEHSDHLLVIGSGVVSASVRDGDKRLEAGRMGPGEVLGIEGIIDDEDSLAEFRTLTSCVLYRIDKEQVKSCLQQRGEVQTALSKLQRFRRQSRESLLLQKPALIKKGGFLSWLHK
>CP022561.1|AYN13324.1|5868836_5870123_-|FAD-binding-oxidoreductase
MSELRQQCLWEHVSKPTVAAQALAGEHKADVCVIGGGITGLSAAIHLLEQGKSVIVLEAWKIGHGGSGRNVGLVNAGTWIRPDDVEATLGQKQGSRLNKVLGEAPAEVFAMIERLGIDCQAQHKGTLHMAHNATGIADLEARHEQWRRRGADVELLTGAQCQEYCGTDKISAALLDRRAGTINPMGYTQGLAAAVARLGGKIFQQSSVEGLEREGDGWRVKTARGAVRAEKVVISTGAYTEGDWSNLQKQFFRGYYYQVASKPLQGIAADKVLPHGQGSWDTRTVLSSIRRDDQGRLLLGSLGRVDNKPAWFVRSWADRIQSHYYPELGKVEWEMHWTGCIDFTPDHLMRLFEPAPGLVAVTGYNGRGNTTGTVIGRAFAEFLLKGEADSLPIPFSPMSGVSAPSLRTAFYESGFSLYHAGQCLRVVL
>CP022561.1|AYN13325.1|5870280_5871771_-|aldehyde-dehydrogenase-family-protein
MVAGLLERLGVAAEAYTQGDYPVHTPIDGSQIASVKLLGKAETIARIDQAQSAFEAWRSVPAPRRGELVRLFGEVLREHKADLGELVSIEAGKITQEGLGEVQEMIDICDFAVGLSRQLYGLTIASERPGHHMRETWHPLGVVGVISAFNFPVAVWAWNTALALVAGNSVVWKPSEKTPLTALACQALFEKALKAFGDAPAGLAQLVIGGREAGEAMVDDPRVPLVSATGSTRMGREVGPRVAARFGRSILELGGNNAMILAPSADLDLAVRGILFSAVGTAGQRCTTLRRLIVHRSIKDEVVARVKAAYGKVRIGDPRKDNLVGPLIDKQSFDAMQGALAKARDEGGQVFGGERQLADQYPNAYYVSPAIAEMPAQSDVVRHETFAPILYVLAYDDFEEALRLNNEVPQGLSSCIFTTDIREAERFQSASGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKGYMRRQTNTVNYSRELPLAQGIVFD
>CP022561.1|AYN13326.1|5871906_5872797_+|transcriptional-regulator-GcvA
MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRLQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKRHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRKLAGAEELAELVLLQSTSRPEAWHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQAGCGVALVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWIHEQLQA
>CP022561.1|AYN13327.1|5873000_5874395_+|DUF1338-domain-containing-protein
MPANDFVSPDSIRAQFSAAMSLMYKQEVPLYGTLLELVSEINQQVMAQQPEVAEALRWTGEIERLDQERHGAIRVGTAEELATIARLFAVMGMQPVGYYDLSSAGVPVHSTAFRAVHEQSLHVSPFRVFTSLLRLELIDNPQLRELAQSILAKRQIFTSRALELIAQCEREGGLDAADAETFVQEALHTFRWHQDATVTAEQYQQLHDQHRLIADVVAFKGPHINHLTPRTLDIDAIQLGMPAKGIPPKAVVEGPPTRRHPILLRQTSFKALQETVAFRDQQGREGSHTARFGEIEQRGAALTPKGRQLYDKLLDATRAALGGAPAEANAERYMALLQANFAEFPDDLAQMREQGLAYFRYFATEKGLAARDQEGRPTTLQGLIDAGHVHFEALVYEDFLPVSAAGIFQSNLGDDAQAEYGSNANREAFEAALGLQVQDELALYAQSERRSLQACAQALNLGSM
>CP022561.1|AYN13328.1|5874447_5875374_-|LysR-family-transcriptional-regulator
MPRQLPPLYALRAFEAAARLSSFTRAGEELSITQSAISRHIRTLEEHFACRLFVRSGRSLQLTEAGRVLLPGVREGFAAFERACETLCGEDEILRMKAPSTLTMRWLLACLSRFRHLQPGNEVQLTSAWMDVDHVDFNQEPFDCAVLLSDGVFPAEWEVRKLFPELLIPVGAPDLLDEEPWDVRRLASIELLHPTVDKRDWREWLERMGLGDEVSLKGGQVFDTLELGMIAAARGYGISMGDLLMVAEDVAQKRLSLPWPTAVPSGMDYYLVWPRTRRGGERLRRLSAFLEGEVAAMDLPDVEILPPL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP022561_2	2.1\|4728763\|29\|CP022561\|CRISPRCasFinder	4728763-4728791	29	CP022561.1	2212789-2212817	0	1.0

1. spacer 2.1|4728763|29|CP022561|CRISPRCasFinder matches to position: 2212789-2212817, mismatch: 0, identity: 1.0

actctgagccgattcggaccacttcagcc	CRISPR spacer
actctgagccgattcggaccacttcagcc	Protospacer
*****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1083291 : 1091070

Thermobifida_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN09214.1\|1083291_1084146_-	RNase adaptor protein RapZ	A0A0R8VB27	Thermobifida_phage	2.4e-08	31.9
AYN09215.1\|1084148_1084613_-	PTS IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA
AYN09216.1\|1084625_1084934_-	ribosome hibernation promoting factor	A0A0K1LP60	Escherichia_phage	4.4e-05	34.1
AYN09217.1\|1085013_1086507_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
AYN09218.1\|1086682_1087408_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.4e-23	26.5
AYN09219.1\|1087408_1087933_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
AYN09220.1\|1087919_1088492_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AYN09221.1\|1088500_1089025_-	phenylphosphate carboxylase subunit delta	A0A140XBD6	Dickeya_phage	6.9e-27	48.1
AYN09222.1\|1089037_1090012_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.0e-36	32.8
AYN09223.1\|1090260_1091070_+	phospholipid ABC transporter ATP-binding protein MlaF	G9BWD6	Planktothrix_phage	7.7e-25	32.5

DBSCAN-SWA_2

1374548 : 1476968

117

Pseudomonas_phage(43.9%)

portal,terminase,capsid,head,transposase,tail,integrase,tRNA

attL 1403071:1403130|attR 1439653:1439717

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN09469.1\|1374548_1376324_+\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	5.6e-12	26.3
AYN09470.1\|1376438_1377185_+	transcriptional regulator	NA	NA	NA	NA
AYN09471.1\|1377370_1377895_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AYN09472.1\|1378004_1378622_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AYN09473.1\|1378618_1379665_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	7.9e-06	27.4
AYN09474.1\|1379790_1380243_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AYN09475.1\|1380245_1380941_+	protein TolQ	NA	NA	NA	NA
AYN09476.1\|1380955_1381408_+	protein TolR	NA	NA	NA	NA
AYN09477.1\|1381407_1382526_+	protein TolA	NA	NA	NA	NA
AYN09478.1\|1382522_1383824_+	protein TolB	NA	NA	NA	NA
AYN09479.1\|1383878_1384379_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA
AYN09480.1\|1384385_1385192_+	tol-pal system protein YbgF	NA	NA	NA	NA
AYN09481.1\|1385360_1386008_+	7-carboxy-7-deazaguanine synthase QueE	NA	NA	NA	NA
AYN13479.1\|1386007_1386700_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	7.0e-27	36.9
AYN09482.1\|1386929_1387889_-	cation transporter	NA	NA	NA	NA
AYN09483.1\|1388031_1390098_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.5e-27	43.8
AYN09484.1\|1390164_1391517_-	APC family permease	NA	NA	NA	NA
AYN09485.1\|1391963_1393472_+	DUF945 domain-containing protein	NA	NA	NA	NA
AYN09486.1\|1393746_1394805_+	quinolinate synthase	NA	NA	NA	NA
AYN09487.1\|1395115_1396552_-	peptidase M48	NA	NA	NA	NA
AYN09488.1\|1396674_1396914_+	SirA family protein	NA	NA	NA	NA
AYN09489.1\|1396934_1398005_+	AI-2E family transporter	NA	NA	NA	NA
AYN09490.1\|1398122_1398596_-	peroxiredoxin	NA	NA	NA	NA
AYN09491.1\|1398607_1399168_-	glycine cleavage system transcriptional regulator	NA	NA	NA	NA
AYN09492.1\|1399427_1400315_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AYN09493.1\|1400330_1401452_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AYN09494.1\|1401452_1402211_+	MBL fold metallo-hydrolase	A8ATK9	Listeria_phage	1.2e-16	30.5
AYN09495.1\|1402241_1402952_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3HI61	Synechococcus_phage	5.1e-41	38.0
1403071:1403130	attL	NA	NA	NA	NA
AYN09496.1\|1403243_1404221_+\|integrase	integrase	W6MYA3	Pseudomonas_phage	1.6e-125	69.8
AYN09497.1\|1404223_1404472_-	hypothetical protein	B5WZU8	Pseudomonas_phage	4.4e-16	57.9
AYN09498.1\|1404468_1404876_-	hypothetical protein	NA	NA	NA	NA
AYN09499.1\|1405012_1405348_-	hypothetical protein	NA	NA	NA	NA
AYN09500.1\|1405334_1405652_-	carbon storage regulator	A0A2I7RT00	Vibrio_phage	8.7e-09	57.9
AYN09501.1\|1405705_1406539_-\|transposase	transposase	A0A0A0YRT7	Pseudomonas_phage	5.0e-112	89.5
AYN09502.1\|1406535_1406784_-	hypothetical protein	NA	NA	NA	NA
AYN09503.1\|1406868_1407264_-	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	1.4e-24	56.7
AYN09504.1\|1407402_1408131_-	peptidase S24	K7P8B2	Enterobacteria_phage	1.1e-49	44.4
AYN09505.1\|1408237_1408534_+	hypothetical protein	NA	NA	NA	NA
AYN09506.1\|1408731_1408965_-	hypothetical protein	NA	NA	NA	NA
AYN09507.1\|1409024_1409321_+	hypothetical protein	NA	NA	NA	NA
AYN09508.1\|1409317_1410043_+	hypothetical protein	A0A1W6JTB2	Pseudomonas_phage	1.6e-45	43.9
AYN09509.1\|1410039_1410432_+	hypothetical protein	NA	NA	NA	NA
AYN13480.1\|1410434_1410659_+	hypothetical protein	A0A2H4J9B6	uncultured_Caudovirales_phage	7.0e-05	66.7
AYN09510.1\|1410663_1411398_+	replication protein	A0A0P0ZC04	Stx2-converting_phage	4.2e-38	49.4
AYN09511.1\|1411378_1412179_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	6.6e-61	50.0
AYN09512.1\|1412175_1413567_+	helicase DnaB	A0A1W6JTB3	Pseudomonas_phage	2.3e-162	62.0
AYN09513.1\|1413553_1414888_+\|integrase	integrase	A0A2D1GND4	Pseudomonas_phage	7.5e-110	47.7
AYN09514.1\|1414880_1415177_+	hypothetical protein	NA	NA	NA	NA
AYN09515.1\|1415173_1415719_+	hypothetical protein	NA	NA	NA	NA
AYN09516.1\|1415866_1416190_+	hypothetical protein	NA	NA	NA	NA
AYN09517.1\|1416249_1416612_+	chemotaxis protein	A0A059VK40	Pseudomonas_phage	4.3e-36	80.6
AYN09518.1\|1416617_1416947_+	hypothetical protein	A0A059VJW1	Pseudomonas_phage	1.1e-09	63.6
AYN09519.1\|1417002_1417215_+	hypothetical protein	NA	NA	NA	NA
AYN09520.1\|1417275_1417455_+	hypothetical protein	NA	NA	NA	NA
AYN09521.1\|1417445_1417775_+	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	4.3e-27	54.9
AYN09522.1\|1417947_1418364_+\|terminase	terminase	NA	NA	NA	NA
AYN09523.1\|1418356_1420099_+\|terminase	terminase	A0A0U4B0M7	Pseudomonas_phage	1.6e-285	80.9
AYN09524.1\|1420083_1421397_+\|portal	phage portal protein	D0R0D3	Streptococcus_phage	3.8e-58	35.4
AYN09525.1\|1421368_1422073_+	peptidase S14	C7BGG9	Burkholderia_phage	1.6e-55	56.3
AYN09526.1\|1422137_1423364_+\|capsid	phage major capsid protein	C7BGH0	Burkholderia_phage	3.9e-73	40.0
AYN09527.1\|1423416_1423650_+	hypothetical protein	NA	NA	NA	NA
AYN09528.1\|1423564_1424227_+	hypothetical protein	NA	NA	NA	NA
AYN09529.1\|1424223_1424562_+\|head,tail	head-tail adaptor protein	K7PH08	Enterobacteria_phage	6.2e-21	51.8
AYN09530.1\|1424554_1425040_+	hypothetical protein	A0A0U3TGT7	Pseudomonas_phage	2.8e-59	75.9
AYN09531.1\|1425036_1425405_+	hypothetical protein	A0A1J0GUW9	Halomonas_phage	2.1e-38	63.9
AYN09532.1\|1425470_1426205_+\|tail	phage tail protein	H2BDC0	Pseudomonas_virus	3.0e-52	51.0
AYN09533.1\|1426213_1426684_+\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	5.4e-39	65.4
AYN09534.1\|1426707_1426908_+	hypothetical protein	Q9MCA3	Pseudomonas_phage	5.1e-07	49.2
AYN09535.1\|1426969_1427296_+	peptidase	NA	NA	NA	NA
AYN09536.1\|1427343_1429770_+\|tail	tail tape measure protein	D4FUM0	Pseudomonas_phage	1.0e-141	45.1
AYN09537.1\|1429766_1430249_+	hypothetical protein	A0A2H4J983	uncultured_Caudovirales_phage	3.7e-43	53.4
AYN09538.1\|1430276_1430522_-	hypothetical protein	NA	NA	NA	NA
AYN09539.1\|1430600_1431020_+	hypothetical protein	A0A0H5AUG1	Pseudomonas_phage	3.6e-42	60.1
AYN09540.1\|1430991_1434090_+	hypothetical protein	A0A2H4J0V9	uncultured_Caudovirales_phage	2.9e-282	48.7
AYN09541.1\|1434101_1434584_+	hypothetical protein	B5WZT5	Pseudomonas_phage	1.2e-25	51.6
AYN09542.1\|1436374_1437133_+	hypothetical protein	NA	NA	NA	NA
AYN09543.1\|1437175_1437973_+	hypothetical protein	S5FV10	Shigella_phage	8.6e-21	32.4
AYN09544.1\|1438092_1438581_+	glycoside hydrolase	Q9MC90	Pseudomonas_phage	6.6e-48	60.5
AYN09545.1\|1438577_1439072_+	hypothetical protein	A0A2H4J3Q6	uncultured_Caudovirales_phage	5.3e-37	74.8
AYN09546.1\|1439125_1439530_+	hypothetical protein	NA	NA	NA	NA
AYN09547.1\|1439768_1440041_-	DUF3077 domain-containing protein	NA	NA	NA	NA
1439653:1439717	attR	NA	NA	NA	NA
AYN09548.1\|1440176_1440440_-	hypothetical protein	NA	NA	NA	NA
AYN09549.1\|1440783_1441080_-	hypothetical protein	NA	NA	NA	NA
AYN09550.1\|1441080_1441941_+	hypothetical protein	NA	NA	NA	NA
AYN09551.1\|1441949_1443848_+	hypothetical protein	NA	NA	NA	NA
AYN09552.1\|1443858_1445067_+	hypothetical protein	NA	NA	NA	NA
AYN09553.1\|1445162_1445780_-	lysine transporter LysE	NA	NA	NA	NA
AYN09554.1\|1445970_1446162_+	DUF4223 domain-containing protein	NA	NA	NA	NA
AYN09555.1\|1446489_1448127_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
AYN09556.1\|1448259_1448595_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AYN09557.1\|1448644_1449736_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
AYN09558.1\|1449859_1451107_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AYN09559.1\|1451109_1452687_-	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA
AYN09560.1\|1452838_1453786_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
AYN09561.1\|1453832_1454759_-	hydroxyproline-2-epimerase	NA	NA	NA	NA
AYN09562.1\|1454782_1456396_-	APC family permease	NA	NA	NA	NA
AYN09563.1\|1456773_1457547_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYN09564.1\|1457533_1458406_-	hypothetical protein	NA	NA	NA	NA
AYN09565.1\|1458559_1459447_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYN09566.1\|1459588_1460107_+	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
AYN09567.1\|1460153_1461053_-	bestrophin	NA	NA	NA	NA
AYN09568.1\|1461073_1462078_-	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
AYN09569.1\|1462301_1464632_+	CbbBc protein	NA	NA	NA	NA
AYN09570.1\|1464741_1465203_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYN09571.1\|1465295_1466477_+	PLP-dependent transferase	NA	NA	NA	NA
AYN09572.1\|1466921_1467158_-	DUF465 domain-containing protein	NA	NA	NA	NA
AYN09573.1\|1467410_1469048_+	phosphoethanolamine transferase	NA	NA	NA	NA
AYN09574.1\|1469225_1470359_+	ribonuclease D	NA	NA	NA	NA
AYN09575.1\|1470355_1470649_+	hypothetical protein	NA	NA	NA	NA
AYN09576.1\|1470651_1471584_+	hydroxyacid dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	3.2e-06	28.6
AYN09577.1\|1471696_1472290_-	nitroreductase family protein	NA	NA	NA	NA
AYN09578.1\|1472435_1472885_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
AYN09579.1\|1472926_1474135_+	hypothetical protein	NA	NA	NA	NA
AYN09580.1\|1474420_1474891_-	23S rRNA methyltransferase	NA	NA	NA	NA
AYN09581.1\|1474963_1475335_-	HNH endonuclease	NA	NA	NA	NA
AYN09582.1\|1475467_1475746_+	hypothetical protein	NA	NA	NA	NA
AYN09583.1\|1476017_1476968_+\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	4.6e-29	36.7

DBSCAN-SWA_3

2115457 : 2124130

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN10079.1\|2115457_2116738_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.5e-96	54.9
AYN10080.1\|2116738_2118130_+	siroheme synthase	NA	NA	NA	NA
AYN10081.1\|2118235_2119195_-	glutathione-dependent reductase	NA	NA	NA	NA
AYN10082.1\|2119289_2120291_-	hypothetical protein	A0A2H4JBY5	uncultured_Caudovirales_phage	8.0e-157	80.5
AYN10083.1\|2120287_2120623_-	sulfurtransferase TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	7.5e-43	75.7
AYN10084.1\|2120619_2120916_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	4.0e-24	59.6
AYN10085.1\|2120915_2121275_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	7.3e-36	65.8
AYN10086.1\|2121276_2121669_-	sulfurtransferase TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.1e-53	79.8
AYN10087.1\|2121764_2123144_-	xanthine permease XanP	H9YQ34	environmental_Halophage	1.6e-27	51.1
AYN10088.1\|2123458_2124130_-	BAX inhibitor (BI)-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.1e-105	91.0

DBSCAN-SWA_4

2193002 : 2248035

Pseudomonas_phage(44.9%)

portal,terminase,capsid,head,tail,transposase,holin,bacteriocin,integrase,protease

attL 2200137:2200196|attR 2252152:2252243

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN10148.1\|2193002_2193395_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
AYN10149.1\|2193468_2193660_-	hypothetical protein	NA	NA	NA	NA
AYN10150.1\|2193849_2194140_-	hypothetical protein	NA	NA	NA	NA
AYN10151.1\|2194257_2194608_+	hypothetical protein	NA	NA	NA	NA
AYN10152.1\|2194777_2195599_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AYN10153.1\|2195599_2196367_-	short-chain dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	5.0e-18	31.3
AYN10154.1\|2196403_2197471_-	phosphotransferase family protein	NA	NA	NA	NA
AYN10155.1\|2197654_2197972_-	SCP-2 family sterol carrier protein	NA	NA	NA	NA
AYN10156.1\|2198028_2198739_-	histidine phosphatase family protein	NA	NA	NA	NA
AYN10157.1\|2198936_2199956_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	5.3e-23	26.0
2200137:2200196	attL	NA	NA	NA	NA
AYN10158.1\|2200284_2201334_-\|integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	3.2e-100	56.3
AYN10159.1\|2201335_2201581_-	DUF4224 domain-containing protein	NA	NA	NA	NA
AYN10160.1\|2201620_2202118_-	hypothetical protein	A0A1B0VM52	Pseudomonas_phage	1.7e-35	60.7
AYN10161.1\|2202169_2202403_-	hypothetical protein	A0A2H4PHJ9	Dickeya_phage	7.6e-10	45.5
AYN10162.1\|2202449_2202635_-	hypothetical protein	NA	NA	NA	NA
AYN10163.1\|2202631_2203048_-	DUF2591 domain-containing protein	A0A1B0VMD7	Pseudomonas_phage	6.9e-14	42.0
AYN10164.1\|2203044_2203317_-	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	2.2e-24	70.3
AYN10165.1\|2203313_2204108_-	hypothetical protein	Q5QF32	Pseudomonas_virus	3.7e-72	54.5
AYN10166.1\|2205223_2205997_-	hypothetical protein	A0A1J0GVP2	Pseudoalteromonas_phage	6.6e-50	50.5
AYN10167.1\|2206048_2206828_+	hypothetical protein	NA	NA	NA	NA
AYN10168.1\|2206905_2207331_-	hypothetical protein	NA	NA	NA	NA
AYN10169.1\|2207449_2208025_+	hypothetical protein	NA	NA	NA	NA
AYN10170.1\|2208014_2208362_-	hypothetical protein	NA	NA	NA	NA
AYN10171.1\|2208607_2209108_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	2.8e-46	72.4
AYN10172.1\|2209104_2209443_-	hypothetical protein	NA	NA	NA	NA
AYN10173.1\|2209461_2209845_-	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	2.8e-17	50.9
AYN10174.1\|2210186_2210492_-	hypothetical protein	NA	NA	NA	NA
AYN10175.1\|2210835_2211237_-	hypothetical protein	Q5G8W9	Enterobacteria_phage	5.1e-06	39.8
AYN10176.1\|2211290_2211992_-	phage repressor protein	A0A2H4J868	uncultured_Caudovirales_phage	3.0e-49	60.0
AYN10177.1\|2212075_2212315_+	hypothetical protein	A0A2H4J0V8	uncultured_Caudovirales_phage	1.4e-27	77.2
AYN10178.1\|2212447_2213302_+	replication protein	W6MYB0	Pseudomonas_phage	5.4e-37	34.1
AYN10179.1\|2213291_2214104_+	ATP-binding protein	A0A2H4J3E5	uncultured_Caudovirales_phage	1.4e-98	68.3
AYN10180.1\|2214106_2214403_+	hypothetical protein	A5VW86	Enterobacteria_phage	3.8e-30	69.7
AYN10181.1\|2214399_2214828_+	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	1.7e-47	68.6
AYN10182.1\|2214824_2216114_+\|integrase	integrase	A0A2D1GND4	Pseudomonas_phage	5.2e-116	53.4
AYN10183.1\|2216274_2216607_+	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	1.7e-15	43.6
AYN10184.1\|2216619_2217306_+	hypothetical protein	A0A1B0VMF2	Pseudomonas_phage	1.0e-78	63.6
AYN10185.1\|2217306_2217729_+	hypothetical protein	NA	NA	NA	NA
AYN10186.1\|2217831_2218155_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	7.7e-29	63.2
AYN10187.1\|2218215_2218395_+	hypothetical protein	NA	NA	NA	NA
AYN10188.1\|2218385_2218754_+	HNH endonuclease	H2BDK0	Pseudomonas_virus	1.8e-18	59.8
AYN10189.1\|2218889_2219375_+\|terminase	terminase	A0A2D1GNP3	Pseudomonas_phage	4.4e-76	86.8
AYN10190.1\|2219375_2221100_+\|terminase	terminase	A0A2D1GNU5	Pseudomonas_phage	0.0e+00	91.3
AYN10191.1\|2221099_2222500_+\|portal	phage portal protein	A0A0U4IJ43	Pseudomonas_phage	9.9e-230	85.4
AYN10192.1\|2222514_2223402_+	peptidase	A0A0U4B0J0	Pseudomonas_phage	7.6e-119	75.7
AYN10193.1\|2223398_2224613_+\|capsid	phage major capsid protein	A0A0U4JIW8	Pseudomonas_phage	3.8e-185	84.0
AYN10194.1\|2224618_2224900_+	hypothetical protein	K7PHI6	Enterobacteria_phage	1.4e-05	53.2
AYN10195.1\|2224902_2225379_+	hypothetical protein	G3ENA1	Psychrobacter_phage	1.1e-15	37.0
AYN10196.1\|2225378_2225720_+\|head,tail	head-tail adaptor protein	A0A1J0GUY4	Halomonas_phage	1.7e-18	48.3
AYN10197.1\|2225712_2226198_+	hypothetical protein	A0A0U3TGT7	Pseudomonas_phage	5.0e-56	74.8
AYN10198.1\|2226194_2226563_+	hypothetical protein	Q9MCA6	Pseudomonas_phage	8.0e-38	59.8
AYN10199.1\|2226628_2227363_+\|tail	phage tail protein	H2BDC0	Pseudomonas_virus	6.7e-52	51.0
AYN10200.1\|2227371_2227842_+\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	7.8e-38	66.2
AYN10201.1\|2227865_2228066_+	hypothetical protein	Q9MCA3	Pseudomonas_phage	1.8e-07	52.3
AYN10202.1\|2228139_2228490_+	hypothetical protein	A0A0S2SY85	Pseudomonas_phage	1.5e-09	57.7
AYN10203.1\|2228545_2230990_+\|tail	tail tape measure protein	A0A2H4PI09	Pseudomonas_phage	9.1e-154	42.7
AYN10204.1\|2230986_2231469_+	hypothetical protein	A0A2H4J983	uncultured_Caudovirales_phage	5.7e-44	54.7
AYN10205.1\|2231473_2231893_+	hypothetical protein	A0A0H5AUG1	Pseudomonas_phage	3.6e-42	60.9
AYN10206.1\|2231864_2234963_+	hypothetical protein	A0A2H4J0V9	uncultured_Caudovirales_phage	2.2e-282	48.2
AYN10207.1\|2234972_2235455_+	hypothetical protein	B5WZT5	Pseudomonas_phage	7.0e-26	51.6
AYN10208.1\|2235498_2237232_+	hypothetical protein	NA	NA	NA	NA
AYN10209.1\|2237246_2238005_+	hypothetical protein	NA	NA	NA	NA
AYN10210.1\|2238048_2238849_+	hypothetical protein	S5FV10	Shigella_phage	1.1e-18	31.9
AYN10211.1\|2238971_2239403_+	muraminidase	A0A0S2SYD0	Pseudomonas_phage	1.0e-52	75.0
AYN10212.1\|2239399_2239912_+	hypothetical protein	NA	NA	NA	NA
AYN13503.1\|2240101_2240326_+	hypothetical protein	A0A2H4JG60	uncultured_Caudovirales_phage	5.9e-28	82.4
AYN10213.1\|2240399_2240693_+	hypothetical protein	A0A2H4JER5	uncultured_Caudovirales_phage	9.5e-34	69.1
AYN10214.1\|2240689_2240995_+	hypothetical protein	NA	NA	NA	NA
AYN10215.1\|2241145_2241616_-	hypothetical protein	NA	NA	NA	NA
AYN10216.1\|2242203_2242632_+	peptidase S24	A0A1L5C2A3	Pseudoalteromonas_phage	1.8e-12	42.0
AYN10217.1\|2242621_2243896_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	7.4e-107	47.9
AYN10218.1\|2243889_2244105_+	hypothetical protein	NA	NA	NA	NA
AYN10219.1\|2245992_2246700_+	hypothetical protein	NA	NA	NA	NA
AYN10220.1\|2246838_2248035_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	4.8e-92	45.2
2252152:2252243	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2558264 : 2568142

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN10499.1\|2558264_2558927_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.2e-28	36.7
AYN10500.1\|2558923_2560288_+	two-component sensor histidine kinase	NA	NA	NA	NA
AYN10501.1\|2560300_2561002_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.9e-104	79.3
AYN10502.1\|2561015_2561486_-	low molecular weight phosphatase family protein	A0A2H4J8A6	uncultured_Caudovirales_phage	2.2e-56	68.6
AYN10503.1\|2561514_2562798_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-174	75.1
AYN10504.1\|2562819_2563167_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.0e-34	61.9
AYN10505.1\|2563632_2563860_+	hypothetical protein	NA	NA	NA	NA
AYN10506.1\|2564147_2565005_-	3-oxoacyl-ACP reductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	1.3e-70	50.5
AYN10507.1\|2565199_2565724_+	hypothetical protein	NA	NA	NA	NA
AYN10508.1\|2566013_2566706_-	DUF421 domain-containing protein	NA	NA	NA	NA
AYN10509.1\|2566801_2567572_-	C-factor	Q56AQ6	Bacillus_thuringiensis_phage	1.1e-41	41.5
AYN10510.1\|2567650_2568142_-	DUF1543 domain-containing protein	A0A2I2L4Z6	Orpheovirus	1.0e-24	36.7

DBSCAN-SWA_6

4687956 : 4762204

Pseudomonas_phage(42.62%)

portal,terminase,capsid,tail,transposase,holin,head,tRNA,integrase

attL 4687182:4687210|attR 4767037:4767065

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4687182:4687210	attL	NA	NA	NA	NA
AYN12290.1\|4687956_4688781_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.0e-106	72.0
AYN12291.1\|4689044_4689644_+	YIP1 family protein	NA	NA	NA	NA
AYN12292.1\|4689775_4690270_+	SprT family protein	NA	NA	NA	NA
AYN12293.1\|4690456_4691236_-	ferredoxin--NADP reductase	NA	NA	NA	NA
AYN12294.1\|4691353_4692280_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYN12295.1\|4692276_4692642_-	diacylglycerol kinase	NA	NA	NA	NA
AYN12296.1\|4692715_4693366_-	DNA-binding response regulator	NA	NA	NA	NA
AYN12297.1\|4693545_4694256_-	DTW domain-containing protein	NA	NA	NA	NA
AYN12298.1\|4694252_4694474_-	hypothetical protein	NA	NA	NA	NA
AYN12299.1\|4694472_4694892_+	hypothetical protein	NA	NA	NA	NA
AYN12300.1\|4694906_4695116_-	hypothetical protein	NA	NA	NA	NA
AYN12301.1\|4695276_4696395_+	cytochrome D ubiquinol oxidase subunit II	NA	NA	NA	NA
AYN12302.1\|4696665_4697136_-	recombination regulator RecX	NA	NA	NA	NA
AYN12303.1\|4697157_4698225_-	DNA recombination/repair protein RecA	A0A0S2MVG1	Bacillus_phage	1.4e-111	62.0
AYN12304.1\|4698328_4698811_-	CinA family protein	B5TK85	Pseudomonas_phage	9.7e-60	78.6
AYN12305.1\|4698867_4699935_-	hypothetical protein	NA	NA	NA	NA
AYN12306.1\|4700290_4700596_-	hypothetical protein	NA	NA	NA	NA
AYN12307.1\|4700585_4700894_-	hypothetical protein	A0A2H4JER5	uncultured_Caudovirales_phage	7.6e-34	70.5
AYN12308.1\|4701012_4701222_-	hypothetical protein	A0A2H4JG60	uncultured_Caudovirales_phage	5.2e-10	56.7
AYN13581.1\|4701246_4701459_-	hypothetical protein	A0A2H4JG60	uncultured_Caudovirales_phage	4.9e-16	66.2
AYN12309.1\|4701649_4702162_-	hypothetical protein	NA	NA	NA	NA
AYN12310.1\|4702158_4702605_-	structural protein P5	A0A2H4J6R1	uncultured_Caudovirales_phage	4.6e-32	52.0
AYN12311.1\|4702976_4704176_-	hypothetical protein	NA	NA	NA	NA
AYN12312.1\|4704275_4705082_-	hypothetical protein	NA	NA	NA	NA
AYN12313.1\|4705106_4707044_-	hypothetical protein	A0A2H5BHG7	Acinetobacter_phage	4.4e-18	27.5
AYN12314.1\|4707100_4707319_-	hypothetical protein	NA	NA	NA	NA
AYN12315.1\|4707356_4707839_-	hypothetical protein	B5WZT5	Pseudomonas_phage	9.2e-26	50.8
AYN12316.1\|4707848_4710947_-	hypothetical protein	A0A2H4J0V9	uncultured_Caudovirales_phage	3.8e-282	48.3
AYN12317.1\|4710918_4711338_-	hypothetical protein	A0A0H5AUG1	Pseudomonas_phage	3.6e-42	60.9
AYN12318.1\|4711342_4711825_-	hypothetical protein	A0A2H4J983	uncultured_Caudovirales_phage	7.5e-44	54.7
AYN12319.1\|4711821_4714230_-\|tail	tail tape measure protein	D4FUM0	Pseudomonas_phage	1.9e-132	41.3
AYN12320.1\|4714260_4714461_-	hypothetical protein	Q9MCA3	Pseudomonas_phage	2.3e-07	48.4
AYN12321.1\|4714478_4714955_-\|tail	phage tail protein	K7PJU9	Enterobacteria_phage	4.1e-34	59.6
AYN12322.1\|4714963_4715479_-\|tail	phage tail protein	Q9MCA5	Pseudomonas_phage	2.6e-50	60.5
AYN12323.1\|4715531_4715900_-	hypothetical protein	Q9MCA6	Pseudomonas_phage	2.7e-38	62.3
AYN12324.1\|4715896_4716382_-	hypothetical protein	Q9MCA7	Pseudomonas_phage	1.6e-54	74.0
AYN12325.1\|4716374_4716716_-\|head,tail	head-tail adaptor protein	B5WZS5	Pseudomonas_phage	5.1e-23	50.4
AYN12326.1\|4716715_4717192_-	hypothetical protein	G3ENA1	Psychrobacter_phage	1.8e-18	40.3
AYN12327.1\|4717195_4717420_-	hypothetical protein	NA	NA	NA	NA
AYN12328.1\|4717461_4718718_-\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	9.6e-91	49.0
AYN12329.1\|4718727_4719429_-	peptidase U35	Q6JIM8	Burkholderia_virus	9.1e-75	63.3
AYN12330.1\|4719425_4720760_-\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	2.2e-130	55.6
AYN12331.1\|4720752_4720917_-	hypothetical protein	NA	NA	NA	NA
AYN12332.1\|4720928_4722656_-\|terminase	terminase	A0A2D1GNU5	Pseudomonas_phage	6.2e-290	84.1
AYN12333.1\|4722655_4723135_-\|terminase	terminase	A0A2D1GNP3	Pseudomonas_phage	1.0e-61	75.3
AYN12334.1\|4723271_4723640_-	HNH endonuclease	H2BDK0	Pseudomonas_virus	1.7e-19	60.9
AYN12335.1\|4723630_4723810_-	hypothetical protein	NA	NA	NA	NA
AYN12336.1\|4723870_4724194_-\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	7.7e-29	63.2
AYN12337.1\|4724523_4724913_-	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	1.8e-43	64.1
AYN12338.1\|4724924_4725242_-	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	2.0e-29	61.9
AYN13582.1\|4725238_4725490_-	hypothetical protein	A0A2H4J105	uncultured_Caudovirales_phage	1.6e-26	65.8
AYN12339.1\|4725513_4726812_-\|integrase	integrase	A0A2D1GND4	Pseudomonas_phage	3.7e-122	52.5
AYN12340.1\|4726808_4727201_-	nuclease	A0A2D1GNH3	Pseudomonas_phage	2.9e-46	72.1
AYN12341.1\|4727197_4727494_-	hypothetical protein	Q8HAF2	Salmonella_phage	3.4e-31	67.0
AYN12342.1\|4727493_4728288_-	ATP-binding protein	A0A2H4J3E5	uncultured_Caudovirales_phage	8.8e-74	54.1
AYN12343.1\|4728277_4729132_-	replication protein	W6MYB0	Pseudomonas_phage	3.5e-36	34.3
AYN12344.1\|4729273_4729450_-	Cro/Cl family transcriptional regulator	A0A0S2SYB8	Pseudomonas_phage	3.2e-13	62.7
AYN12345.1\|4729538_4730390_+	Cro/Cl family transcriptional regulator	A0A0S2SYF7	Pseudomonas_phage	1.0e-75	52.1
AYN12346.1\|4730454_4730748_-	hypothetical protein	A0A0S2SYC9	Pseudomonas_phage	1.8e-16	61.8
AYN12347.1\|4731101_4731323_+	hypothetical protein	NA	NA	NA	NA
AYN12348.1\|4731385_4731823_+	tellurite resistance protein	A0A2H4P7E3	Pseudomonas_phage	3.7e-34	56.2
AYN12349.1\|4731819_4732014_+	hypothetical protein	NA	NA	NA	NA
AYN12350.1\|4732203_4732587_+	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	2.8e-17	50.9
AYN12351.1\|4732606_4732945_+	hypothetical protein	NA	NA	NA	NA
AYN12352.1\|4732941_4733439_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	2.8e-46	71.7
AYN12353.1\|4733684_4734032_+	hypothetical protein	NA	NA	NA	NA
AYN12354.1\|4734190_4734790_-	hypothetical protein	NA	NA	NA	NA
AYN12355.1\|4734880_4735891_+	nucleoid-associated protein YejK	L7TI92	Pseudomonas_virus	4.6e-120	62.7
AYN12356.1\|4735945_4736569_+	hypothetical protein	A0A2H4JC30	uncultured_Caudovirales_phage	3.4e-57	53.5
AYN12357.1\|4736652_4737033_+	hypothetical protein	A0A2H4J2C6	uncultured_Caudovirales_phage	5.0e-35	55.1
AYN12358.1\|4737046_4737862_+	hypothetical protein	NA	NA	NA	NA
AYN12359.1\|4738053_4738347_+	hypothetical protein	A0A0S2SY28	Pseudomonas_phage	4.3e-26	60.9
AYN12360.1\|4738343_4738595_+	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	6.8e-41	97.6
AYN12361.1\|4738591_4739107_+	hypothetical protein	K7PHA5	Enterobacterial_phage	2.9e-17	36.5
AYN12362.1\|4739103_4739502_+	DUF2591 domain-containing protein	A0A125RNP6	Pseudomonas_phage	6.6e-14	37.7
AYN13583.1\|4739744_4740647_+	phosphohydrolase	A0A1V0E8C5	Vibrio_phage	1.3e-68	47.1
AYN12363.1\|4740700_4741015_+	hypothetical protein	NA	NA	NA	NA
AYN12364.1\|4741053_4741245_+	DUF4224 domain-containing protein	A0A1B0VMB6	Pseudomonas_phage	1.4e-17	62.9
AYN12365.1\|4741260_4742238_+\|integrase	integrase	A0A1B0VP19	Pseudomonas_phage	1.1e-129	69.6
AYN12366.1\|4742288_4744862_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	5.2e-27	23.2
AYN12367.1\|4745002_4745326_+	Ferredoxin 1	NA	NA	NA	NA
AYN12368.1\|4745483_4746689_+\|transposase	ISL3 family transposase	A4PE56	Ralstonia_virus	1.4e-110	54.0
AYN12369.1\|4747177_4748185_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AYN12370.1\|4748293_4749151_-	peptigoglycan-binding protein LysM	I3PV79	Clostridium_phage	1.9e-13	36.2
AYN13584.1\|4749388_4750066_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-43	52.0
AYN12371.1\|4750062_4750812_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.7e-67	52.6
AYN12372.1\|4750799_4751858_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
AYN12373.1\|4751854_4752328_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AYN12374.1\|4752440_4753295_-	S-formylglutathione hydrolase	NA	NA	NA	NA
AYN12375.1\|4753303_4754416_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	6.2e-33	28.8
AYN12376.1\|4754523_4755420_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYN12377.1\|4755580_4756288_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AYN12378.1\|4756284_4756566_-	cell division protein FtsB	NA	NA	NA	NA
AYN12379.1\|4756731_4758021_-	enolase	A0A1X9I5Z8	Streptococcus_phage	1.9e-139	59.6
AYN12380.1\|4758175_4759021_-	2-dehydro-3-deoxyphosphooctonate aldolase 1	E3T537	Cafeteria_roenbergensis_virus	1.1e-50	42.0
AYN12381.1\|4759024_4760653_-	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.0e-158	53.3
AYN12382.1\|4760920_4762204_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
4767037:4767065	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP022561

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection