CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP033096	Escherichia coli strain CP53 chromosome, complete genome	10 crisprs	csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3,DEDDh,WYL,DinG,c2c9_V-U4	12	9
CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	1 crisprs	NA	2	2
CP033095	Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence	0 crisprs	NA	0	2
CP033097	Escherichia coli strain CP53 plasmid pCP53-113k, complete sequence	0 crisprs	DEDDh	0	2
CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	1 crisprs	csa3	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033096_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_1

1006499-1006832

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

5 spacers

cas8e

The CRISPR arrays of CP033096_1

>merge|CP033096|1|1006499-1006832|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCGGACACCATAATGATACTAAGTGTCGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCGGTAACTACGGCACAAAACAGGAGCACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGTGATTCAGTAATCGTTTGAGTATGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATCCCAGCCTTGAAATTTTGGCTCATGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTCTATTTCCTCGGGATTTGCCGACACGCGTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP033096|1|1|1006499-1006832|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCGGACACCATAATGATACTAAGTGTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGTAACTACGGCACAAAACAGGAGCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP033096|1|1|1006499-1006832|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCGGACACCATAATGATACTAAGTGTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGTAACTACGGCACAAAACAGGAGCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA

>CP033096|1|1|1006499-1006832|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCGGACACCATAATGATACTAAGTGTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGTAACTACGGCACAAAACAGGAGCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN89004.1\|999814_1000150_+\|mRNA-interferase-MazF	unknown	unknown	gnl\|CDD\|182138
CP033096.1\|AYN89019.1\|1016114_1017131_+\|IS5-like-element-IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
CP033096.1\|AYN89013.1\|1009311_1009677_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP033096.1\|AYN89015.1\|1011791_1013504_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP033096.1\|AYN89003.1\|999566_999815_+\|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
CP033096.1\|AYN89001.1\|995905_997207_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
CP033096.1\|AYN89016.1\|1013578_1014313_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP033096.1\|AYN89008.1\|1004322_1005195_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
CP033096.1\|AYN89005.1\|1000220_1001012_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP033096.1\|AYN89010.1\|1005487_1006159_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP033096.1\|AYN89017.1\|1014577_1014730_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
CP033096.1\|AYN89018.1\|1014922_1016035_-\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
CP033096.1\|AYN89020.1\|1020269_1021832_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP033096.1\|AYN89014.1\|1009992_1011792_+\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP033096.1\|AYN89006.1\|1001239_1002877_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP033096.1\|AYN89002.1\|997254_999489_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
CP033096.1\|AYN89009.1\|1005208_1005349_-\|hypothetical-protein	unknown	unknown	unknown
CP033096.1\|AYN89007.1\|1002964_1004263_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP033096.1\|AYN89012.1\|1007962_1009234_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
CP033096.1\|AYN89011.1\|1007699_1007972_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN89004.1\|999814_1000150_+\|mRNA-interferase-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
CP033096.1\|AYN89019.1\|1016114_1017131_+\|IS5-like-element-IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	2.06978e-54
CP033096.1\|AYN89013.1\|1009311_1009677_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
CP033096.1\|AYN89015.1\|1011791_1013504_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP033096.1\|AYN89003.1\|999566_999815_+\|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.43005e-47
CP033096.1\|AYN89001.1\|995905_997207_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
CP033096.1\|AYN89016.1\|1013578_1014313_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.32685e-138
CP033096.1\|AYN89008.1\|1004322_1005195_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
CP033096.1\|AYN89005.1\|1000220_1001012_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP033096.1\|AYN89010.1\|1005487_1006159_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP033096.1\|AYN89018.1\|1014922_1016035_-\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
CP033096.1\|AYN89020.1\|1020269_1021832_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP033096.1\|AYN89014.1\|1009992_1011792_+\|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP033096.1\|AYN89006.1\|1001239_1002877_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP033096.1\|AYN89002.1\|997254_999489_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP033096.1\|AYN89017.1\|1014577_1014730_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
CP033096.1\|AYN89007.1\|1002964_1004263_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP033096.1\|AYN89012.1\|1007962_1009234_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.23356e-126
CP033096.1\|AYN89011.1\|1007699_1007972_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	6.58096e-40

>CP033096.1|AYN89010.1|1005487_1006159_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP033096.1|AYN89009.1|1005208_1005349_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>CP033096.1|AYN89008.1|1004322_1005195_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>CP033096.1|AYN89007.1|1002964_1004263_+|enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP033096.1|AYN89006.1|1001239_1002877_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP033096.1|AYN89005.1|1000220_1001012_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP033096.1|AYN89004.1|999814_1000150_+|mRNA-interferase-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP033096.1|AYN89003.1|999566_999815_+|MazF-MazE-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPTTLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP033096.1|AYN89002.1|997254_999489_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP033096.1|AYN89001.1|995905_997207_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDLNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVSVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>CP033096.1|AYN89011.1|1007699_1007972_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRVMLPTY
>CP033096.1|AYN89012.1|1007962_1009234_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDTALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>CP033096.1|AYN89013.1|1009311_1009677_-|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>CP033096.1|AYN89014.1|1009992_1011792_+|assimilatory-sulfite-reductase-(NADPH)-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQVASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>CP033096.1|AYN89015.1|1011791_1013504_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>CP033096.1|AYN89016.1|1013578_1014313_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>CP033096.1|AYN89017.1|1014577_1014730_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP033096.1|AYN89018.1|1014922_1016035_-|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>CP033096.1|AYN89019.1|1016114_1017131_+|IS5-like-element-IS5-family-transposase
MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
>CP033096.1|AYN89020.1|1020269_1021832_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISVPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYCANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE

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Crispr_ID: CP033096_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_2

1026128-1026583

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

7 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of CP033096_2

>merge|CP033096|2|1026128-1026583|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCGTAGAGATTCTCGAAACCGATCCGGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAAATAATAATCCAGTAGCCCCATGTATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAATAAAAAATATTCTATTTCTGCTGAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGCGAGCAAAAGATCCAGGCCGAGAAAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAACCGCGTCAGTATTGGACAGGATATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCTATTGTGAATTTGAAATGGTCCAGCACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCGTCAGCGGGGATAAACCG

>CP033096|2|2|1026128-1026583|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>CP033096|2|2|1026128-1026583|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>CP033096|2|2|1026128-1026583|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN89019.1\|1016114_1017131_+\|IS5-like-element-IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
CP033096.1\|AYN89034.1\|1032502_1032982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP033096.1\|AYN89026.1\|1025737_1026031_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP033096.1\|AYN89030.1\|1030290_1030896_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP033096.1\|AYN89028.1\|1027953_1028862_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP033096.1\|AYN89025.1\|1024817_1025741_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP033096.1\|AYN89021.1\|1021828_1022365_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP033096.1\|AYN89029.1\|1028863_1030291_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP033096.1\|AYN89032.1\|1031462_1031774_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP033096.1\|AYN89022.1\|1022376_1023432_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
CP033096.1\|AYN89023.1\|1023442_1024189_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP033096.1\|AYN89018.1\|1014922_1016035_-\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
CP033096.1\|AYN89020.1\|1020269_1021832_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP033096.1\|AYN89017.1\|1014577_1014730_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
CP033096.1\|AYN89033.1\|1031792_1032503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP033096.1\|AYN89027.1\|1026664_1027702_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP033096.1\|AYN89035.1\|1032978_1034028_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP033096.1\|AYN89024.1\|1024170_1024821_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP033096.1\|AYN89031.1\|1030945_1031269_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP033096.1\|AYN89036.1\|1034008_1034770_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN89019.1\|1016114_1017131_+\|IS5-like-element-IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	2.06978e-54
CP033096.1\|AYN89034.1\|1032502_1032982_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
CP033096.1\|AYN89026.1\|1025737_1026031_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.21674e-65
CP033096.1\|AYN89030.1\|1030290_1030896_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
CP033096.1\|AYN89028.1\|1027953_1028862_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP033096.1\|AYN89025.1\|1024817_1025741_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	8.96044e-158
CP033096.1\|AYN89021.1\|1021828_1022365_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
CP033096.1\|AYN89029.1\|1028863_1030291_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP033096.1\|AYN89032.1\|1031462_1031774_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
CP033096.1\|AYN89022.1\|1022376_1023432_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.80924e-154
CP033096.1\|AYN89023.1\|1023442_1024189_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	9.21603e-48
CP033096.1\|AYN89018.1\|1014922_1016035_-\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
CP033096.1\|AYN89020.1\|1020269_1021832_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP033096.1\|AYN89017.1\|1014577_1014730_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
CP033096.1\|AYN89033.1\|1031792_1032503_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
CP033096.1\|AYN89027.1\|1026664_1027702_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP033096.1\|AYN89035.1\|1032978_1034028_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP033096.1\|AYN89024.1\|1024170_1024821_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.38075e-91
CP033096.1\|AYN89031.1\|1030945_1031269_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
CP033096.1\|AYN89036.1\|1034008_1034770_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150

>CP033096.1|AYN89026.1|1025737_1026031_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>CP033096.1|AYN89025.1|1024817_1025741_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>CP033096.1|AYN89024.1|1024170_1024821_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFTPELSTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSWQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>CP033096.1|AYN89023.1|1023442_1024189_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPIFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDRFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>CP033096.1|AYN89022.1|1022376_1023432_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKVLAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>CP033096.1|AYN89021.1|1021828_1022365_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>CP033096.1|AYN89020.1|1020269_1021832_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISVPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYCANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>CP033096.1|AYN89019.1|1016114_1017131_+|IS5-like-element-IS5-family-transposase
MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
>CP033096.1|AYN89018.1|1014922_1016035_-|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>CP033096.1|AYN89017.1|1014577_1014730_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>CP033096.1|AYN89027.1|1026664_1027702_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNHPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>CP033096.1|AYN89028.1|1027953_1028862_+|sulfate-adenylyltransferase-subunit-2
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>CP033096.1|AYN89029.1|1028863_1030291_+|sulfate-adenylyltransferase
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>CP033096.1|AYN89030.1|1030290_1030896_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>CP033096.1|AYN89031.1|1030945_1031269_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>CP033096.1|AYN89032.1|1031462_1031774_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>CP033096.1|AYN89033.1|1031792_1032503_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>CP033096.1|AYN89034.1|1032502_1032982_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>CP033096.1|AYN89035.1|1032978_1034028_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>CP033096.1|AYN89036.1|1034008_1034770_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: CP033096_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_4

1555695-1555812

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_4

>merge|CP033096|4|1555695-1555812|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>CP033096|4|4|1555695-1555812|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN89520.1\|1568022_1568646_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
CP033096.1\|AYN89510.1\|1550607_1551966_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
CP033096.1\|AYN89511.1\|1551970_1553047_+\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP033096.1\|AYN89517.1\|1562692_1563415_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
CP033096.1\|AYN89518.1\|1563561_1566189_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP033096.1\|AYN92242.1\|1554467_1555598_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP033096.1\|AYN89509.1\|1548706_1550335_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
CP033096.1\|AYN89512.1\|1553088_1553295_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182050
CP033096.1\|AYN89507.1\|1546270_1547461_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
CP033096.1\|AYN89515.1\|1555831_1558117_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
CP033096.1\|AYN89513.1\|1553509_1554160_+\|protein-InaA	unknown	unknown	gnl\|CDD\|182136
CP033096.1\|AYN89516.1\|1558812_1562565_+\|AIDA-I-family-autotransporter-YfaL	unknown	unknown	gnl\|CDD\|182059
CP033096.1\|AYN89514.1\|1554213_1554468_-\|ferredoxin	unknown	unknown	gnl\|CDD\|182668
CP033096.1\|AYN89506.1\|1545178_1546078_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
CP033096.1\|AYN89521.1\|1568579_1573184_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
CP033096.1\|AYN89522.1\|1573184_1574834_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
CP033096.1\|AYN89508.1\|1547457_1548717_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617
CP033096.1\|AYN89523.1\|1574858_1575614_+\|DUF2135-domain-containing-protein	unknown	unknown	gnl\|CDD\|227021
CP033096.1\|AYN89519.1\|1566337_1568026_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
CP033096.1\|AYN89524.1\|1575687_1576872_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN89520.1\|1568022_1568646_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
CP033096.1\|AYN89510.1\|1550607_1551966_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP033096.1\|AYN89511.1\|1551970_1553047_+\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP033096.1\|AYN89517.1\|1562692_1563415_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
CP033096.1\|AYN89518.1\|1563561_1566189_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP033096.1\|AYN92242.1\|1554467_1555598_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP033096.1\|AYN89509.1\|1548706_1550335_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP033096.1\|AYN89512.1\|1553088_1553295_-\|hypothetical-protein	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.13329e-36
CP033096.1\|AYN89507.1\|1546270_1547461_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
CP033096.1\|AYN89515.1\|1555831_1558117_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
CP033096.1\|AYN89513.1\|1553509_1554160_+\|protein-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
CP033096.1\|AYN89516.1\|1558812_1562565_+\|AIDA-I-family-autotransporter-YfaL	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP033096.1\|AYN89514.1\|1554213_1554468_-\|ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP033096.1\|AYN89506.1\|1545178_1546078_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
CP033096.1\|AYN89521.1\|1568579_1573184_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP033096.1\|AYN89522.1\|1573184_1574834_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.10535e-127
CP033096.1\|AYN89508.1\|1547457_1548717_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
CP033096.1\|AYN89523.1\|1574858_1575614_+\|DUF2135-domain-containing-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.80255e-148
CP033096.1\|AYN89519.1\|1566337_1568026_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP033096.1\|AYN89524.1\|1575687_1576872_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0

>CP033096.1|AYN92242.1|1554467_1555598_-|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>CP033096.1|AYN89514.1|1554213_1554468_-|ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP033096.1|AYN89513.1|1553509_1554160_+|protein-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP033096.1|AYN89512.1|1553088_1553295_-|hypothetical-protein
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
>CP033096.1|AYN89511.1|1551970_1553047_+|glycerophosphoryl-diester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP033096.1|AYN89510.1|1550607_1551966_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>CP033096.1|AYN89509.1|1548706_1550335_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP033096.1|AYN89508.1|1547457_1548717_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>CP033096.1|AYN89507.1|1546270_1547461_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>CP033096.1|AYN89506.1|1545178_1546078_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>CP033096.1|AYN89515.1|1555831_1558117_-|ribonucleoside-diphosphate-reductase-1-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP033096.1|AYN89516.1|1558812_1562565_+|AIDA-I-family-autotransporter-YfaL
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNSGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP033096.1|AYN89517.1|1562692_1563415_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP033096.1|AYN89518.1|1563561_1566189_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP033096.1|AYN89519.1|1566337_1568026_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP033096.1|AYN89520.1|1568022_1568646_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>CP033096.1|AYN89521.1|1568579_1573184_+|alpha-2-macroglobulin-family-protein
MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILVKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEERTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVRVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINPGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKDEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>CP033096.1|AYN89522.1|1573184_1574834_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLIIPDSSATQRVSASPATTGARTMAAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP033096.1|AYN89523.1|1574858_1575614_+|DUF2135-domain-containing-protein
MLLVALSPVAHSEGVQEVEIDAPLSGWHPVEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP033096.1|AYN89524.1|1575687_1576872_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLTRIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: CP033096_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_5

2140068-2140191

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_5

>merge|CP033096|5|2140068-2140191|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP033096|5|5|2140068-2140191|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN90022.1\|2131491_2131701_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
CP033096.1\|AYN90040.1\|2150746_2151328_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
CP033096.1\|AYN90030.1\|2139627_2139933_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
CP033096.1\|AYN90031.1\|2140505_2141762_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
CP033096.1\|AYN90028.1\|2137073_2137886_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
CP033096.1\|AYN90039.1\|2149342_2150512_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP033096.1\|AYN90024.1\|2132802_2134905_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
CP033096.1\|AYN90023.1\|2132155_2132782_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
CP033096.1\|AYN90021.1\|2129522_2130935_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
CP033096.1\|AYN90037.1\|2147763_2148789_-\|PurR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236739
CP033096.1\|AYN90034.1\|2144071_2145220_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
CP033096.1\|AYN90029.1\|2137897_2139502_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
CP033096.1\|AYN90035.1\|2145510_2146722_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
CP033096.1\|AYN90027.1\|2136284_2137070_+\|protein-PhsC	unknown	unknown	gnl\|CDD\|184968
CP033096.1\|AYN90038.1\|2149087_2149177_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
CP033096.1\|AYN90032.1\|2141802_2143176_-\|multidrug-resistance-protein-MdtK	unknown	unknown	gnl\|CDD\|234981
CP033096.1\|AYN90033.1\|2143390_2144032_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
CP033096.1\|AYN90036.1\|2146834_2147767_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
CP033096.1\|AYN90026.1\|2135619_2136288_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
CP033096.1\|AYN90025.1\|2134908_2135556_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN90022.1\|2131491_2131701_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
CP033096.1\|AYN90040.1\|2150746_2151328_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
CP033096.1\|AYN90030.1\|2139627_2139933_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
CP033096.1\|AYN90031.1\|2140505_2141762_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
CP033096.1\|AYN90028.1\|2137073_2137886_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	2.57453e-173
CP033096.1\|AYN90039.1\|2149342_2150512_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
CP033096.1\|AYN90024.1\|2132802_2134905_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
CP033096.1\|AYN90023.1\|2132155_2132782_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
CP033096.1\|AYN90021.1\|2129522_2130935_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
CP033096.1\|AYN90037.1\|2147763_2148789_-\|PurR-family-transcriptional-regulator	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
CP033096.1\|AYN90034.1\|2144071_2145220_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
CP033096.1\|AYN90029.1\|2137897_2139502_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
CP033096.1\|AYN90035.1\|2145510_2146722_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
CP033096.1\|AYN90027.1\|2136284_2137070_+\|protein-PhsC	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	5.40835e-163
CP033096.1\|AYN90032.1\|2141802_2143176_-\|multidrug-resistance-protein-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
CP033096.1\|AYN90033.1\|2143390_2144032_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
CP033096.1\|AYN90036.1\|2146834_2147767_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
CP033096.1\|AYN90026.1\|2135619_2136288_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	2.09652e-76
CP033096.1\|AYN90025.1\|2134908_2135556_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	3.717e-122

>CP033096.1|AYN90030.1|2139627_2139933_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>CP033096.1|AYN90029.1|2137897_2139502_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPSSRARRRLSFD
>CP033096.1|AYN90028.1|2137073_2137886_+|hypothetical-protein
MIITQADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIVTAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>CP033096.1|AYN90027.1|2136284_2137070_+|protein-PhsC
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>CP033096.1|AYN90026.1|2135619_2136288_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>CP033096.1|AYN90025.1|2134908_2135556_+|YdhW-family-putative-oxidoreductase-system-protein
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>CP033096.1|AYN90024.1|2132802_2134905_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>CP033096.1|AYN90023.1|2132155_2132782_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>CP033096.1|AYN90022.1|2131491_2131701_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>CP033096.1|AYN90021.1|2129522_2130935_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>CP033096.1|AYN90031.1|2140505_2141762_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>CP033096.1|AYN90032.1|2141802_2143176_-|multidrug-resistance-protein-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRMPSAIILQRASR
>CP033096.1|AYN90033.1|2143390_2144032_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>CP033096.1|AYN90034.1|2144071_2145220_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>CP033096.1|AYN90035.1|2145510_2146722_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>CP033096.1|AYN90036.1|2146834_2147767_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>CP033096.1|AYN90037.1|2147763_2148789_-|PurR-family-transcriptional-regulator
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>CP033096.1|AYN90038.1|2149087_2149177_+|YnhF-family-membrane-protein
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>CP033096.1|AYN90039.1|2149342_2150512_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>CP033096.1|AYN90040.1|2150746_2151328_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: CP033096_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_7

2952721-2952926

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	PILER-CR

3 spacers

The CRISPR arrays of CP033096_7

>merge|CP033096|7|2952721-2952926|CRISPRCasFinder,CRT,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>CP033096|7|7|2952721-2952925|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>CP033096|7|3|2952721-2952925|CRT
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>CP033096|7|3|2952777-2952926|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN90757.1\|2960545_2962204_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
CP033096.1\|AYN90760.1\|2964861_2966514_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
CP033096.1\|AYN90747.1\|2947598_2949365_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
CP033096.1\|AYN90750.1\|2952117_2952336_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
CP033096.1\|AYN90742.1\|2940593_2941205_-\|outer-membrane-lipoprotein-carrier-protein-LolA	unknown	unknown	gnl\|CDD\|129638
CP033096.1\|AYN90749.1\|2951128_2951833_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
CP033096.1\|AYN90743.1\|2941359_2945337_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
CP033096.1\|AYN90753.1\|2956086_2956311_+\|cold-shock-protein-CspD	unknown	unknown	gnl\|CDD\|77494
CP033096.1\|AYN90756.1\|2959556_2960549_+\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
CP033096.1\|AYN90754.1\|2956389_2958330_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
CP033096.1\|AYN90741.1\|2939239_2940583_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
CP033096.1\|AYN90755.1\|2958326_2959442_-\|MacA-family-efflux-pump-subunit	unknown	unknown	gnl\|CDD\|183211
CP033096.1\|AYN90744.1\|2945471_2945966_-\|leucine-responsive-regulatory-protein	unknown	unknown	gnl\|CDD\|183009
CP033096.1\|AYN90752.1\|2955443_2955764_-\|ATP-dependent-Clp-protease-adaptor-ClpS	unknown	unknown	gnl\|CDD\|178809
CP033096.1\|AYN90745.1\|2946065_2946278_-\|hypothetical-protein	unknown	unknown	unknown
CP033096.1\|AYN90748.1\|2949365_2951087_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
CP033096.1\|AYN90758.1\|2962628_2963324_+\|aquaporin	unknown	unknown	gnl\|CDD\|235453
CP033096.1\|AYN90746.1\|2946510_2947476_+\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|182343
CP033096.1\|AYN90759.1\|2963818_2964718_+\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
CP033096.1\|AYN90751.1\|2953136_2955413_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN90757.1\|2960545_2962204_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
CP033096.1\|AYN90760.1\|2964861_2966514_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
CP033096.1\|AYN90747.1\|2947598_2949365_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
CP033096.1\|AYN90750.1\|2952117_2952336_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
CP033096.1\|AYN90742.1\|2940593_2941205_-\|outer-membrane-lipoprotein-carrier-protein-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
CP033096.1\|AYN90749.1\|2951128_2951833_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.04071e-139
CP033096.1\|AYN90743.1\|2941359_2945337_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
CP033096.1\|AYN90753.1\|2956086_2956311_+\|cold-shock-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
CP033096.1\|AYN90756.1\|2959556_2960549_+\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	8.48293e-133
CP033096.1\|AYN90741.1\|2939239_2940583_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
CP033096.1\|AYN90755.1\|2958326_2959442_-\|MacA-family-efflux-pump-subunit	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
CP033096.1\|AYN90744.1\|2945471_2945966_-\|leucine-responsive-regulatory-protein	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
CP033096.1\|AYN90752.1\|2955443_2955764_-\|ATP-dependent-Clp-protease-adaptor-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
CP033096.1\|AYN90754.1\|2956389_2958330_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
CP033096.1\|AYN90748.1\|2949365_2951087_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
CP033096.1\|AYN90758.1\|2962628_2963324_+\|aquaporin	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.04944e-144
CP033096.1\|AYN90746.1\|2946510_2947476_+\|thioredoxin-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
CP033096.1\|AYN90759.1\|2963818_2964718_+\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.37433e-118
CP033096.1\|AYN90751.1\|2953136_2955413_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0

>CP033096.1|AYN90750.1|2952117_2952336_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>CP033096.1|AYN90749.1|2951128_2951833_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGALFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>CP033096.1|AYN90748.1|2949365_2951087_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFIFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTHVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASSGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>CP033096.1|AYN90747.1|2947598_2949365_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWGVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
>CP033096.1|AYN90746.1|2946510_2947476_+|thioredoxin-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>CP033096.1|AYN90745.1|2946065_2946278_-|hypothetical-protein
MFCFDNPLVFCENIRGRKKTVFLYAHNHACKYHVYRASEIYVWRGQTPFVMSIAATRQRSSHRRPRHCAP
>CP033096.1|AYN90744.1|2945471_2945966_-|leucine-responsive-regulatory-protein
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>CP033096.1|AYN90743.1|2941359_2945337_-|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>CP033096.1|AYN90742.1|2940593_2941205_-|outer-membrane-lipoprotein-carrier-protein-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>CP033096.1|AYN90741.1|2939239_2940583_-|replication-associated-recombination-protein-A
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>CP033096.1|AYN90751.1|2953136_2955413_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKAKNELTYGFQSAQKHKAEAAH
>CP033096.1|AYN90752.1|2955443_2955764_-|ATP-dependent-Clp-protease-adaptor-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>CP033096.1|AYN90753.1|2956086_2956311_+|cold-shock-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>CP033096.1|AYN90754.1|2956389_2958330_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLRLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALA
>CP033096.1|AYN90755.1|2958326_2959442_-|MacA-family-efflux-pump-subunit
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>CP033096.1|AYN90756.1|2959556_2960549_+|DUF535-domain-containing-protein
MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>CP033096.1|AYN90757.1|2960545_2962204_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>CP033096.1|AYN90758.1|2962628_2963324_+|aquaporin
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD
>CP033096.1|AYN90759.1|2963818_2964718_+|lysine-exporter-LysO-family-protein
MFSGLLIILVPLIVGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>CP033096.1|AYN90760.1|2964861_2966514_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

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Crispr_ID: CP033096_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_8

3119666-3119810

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_8

>merge|CP033096|8|3119666-3119810|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP033096|8|8|3119666-3119810|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN90920.1\|3123786_3124839_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
CP033096.1\|AYN92310.1\|3116915_3117134_+\|excisionase	unknown	unknown	gnl\|CDD\|116439
CP033096.1\|AYN90912.1\|3115704_3115896_+\|DUF1382-family-protein	unknown	unknown	gnl\|CDD\|369224
CP033096.1\|AYN90924.1\|3127985_3129044_-\|molybdenum-import-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP033096.1\|AYN90927.1\|3130675_3130825_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
CP033096.1\|AYN90923.1\|3127166_3127985_+\|pyridoxal-phosphate-phosphatase-YbhA	unknown	unknown	gnl\|CDD\|182523
CP033096.1\|AYN90911.1\|3114872_3115553_+\|exonuclease	unknown	unknown	gnl\|CDD\|378216
CP033096.1\|AYN90916.1\|3117111_3118182_+\|integrase	unknown	unknown	gnl\|CDD\|271181
CP033096.1\|AYN90922.1\|3126016_3127012_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP033096.1\|AYN90918.1\|3119833_3122095_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
CP033096.1\|AYN90917.1\|3118316_3119600_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236709
CP033096.1\|AYN90910.1\|3114090_3114876_+\|phage-recombination-protein-Bet	unknown	unknown	gnl\|CDD\|273871
CP033096.1\|AYN90914.1\|3116286_3116505_+\|TraR/DksA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|222775
CP033096.1\|AYN90919.1\|3122277_3123711_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
CP033096.1\|AYN90921.1\|3125022_3125976_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
CP033096.1\|AYN90915.1\|3116551_3116830_+\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
CP033096.1\|AYN90913.1\|3115906_3116188_+\|hypothetical-protein	unknown	unknown	unknown
CP033096.1\|AYN92309.1\|3115549_3115732_+\|DUF1317-family-protein	unknown	unknown	gnl\|CDD\|284449
CP033096.1\|AYN90925.1\|3129046_3129736_-\|molybdenum-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181841
CP033096.1\|AYN90926.1\|3129735_3130509_-\|molybdate-binding-periplasmic-protein	unknown	unknown	gnl\|CDD\|182641

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN92310.1\|3116915_3117134_+\|excisionase	gnl\|CDD\|116439	pfam07825, Exc, Excisionase-like protein. The phage-encoded excisionase protein (Xis) is involved in excisive recombination by regulating the assembly of the excisive intasome and by inhibiting viral integration. It adopts an unusual 'winged'-helix structure in which two alpha helices are packed against two extended strands. Also present in the structure is a two-stranded anti-parallel beta-sheet, whose strands are connected by a four-residue 'wing'. During interaction with DNA, helix alpha2 is thought to insert into the major groove, while the wing contacts the adjacent minor groove or phosphodiester backbone. The C-terminal region of Xis is involved in interaction with phage-encoded integrase (Int), and a putative C-terminal alpha helix may fold upon interaction with Int and/or DNA.	9.50635e-35
CP033096.1\|AYN90912.1\|3115704_3115896_+\|DUF1382-family-protein	gnl\|CDD\|369224	pfam07131, DUF1382, Protein of unknown function (DUF1382). This family consists of several hypothetical Escherichia coli and bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	7.90907e-23
CP033096.1\|AYN90924.1\|3127985_3129044_-\|molybdenum-import-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP033096.1\|AYN90927.1\|3130675_3130825_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
CP033096.1\|AYN90923.1\|3127166_3127985_+\|pyridoxal-phosphate-phosphatase-YbhA	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP033096.1\|AYN90911.1\|3114872_3115553_+\|exonuclease	gnl\|CDD\|378216	pfam09588, YqaJ, YqaJ-like viral recombinase domain. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA in a Mg(2+)-dependent reaction, It has a preference for 5'-phosphorylated DNA ends. It thus forms part of the two-component SynExo viral recombinase functional unit.	2.98796e-29
CP033096.1\|AYN90916.1\|3117111_3118182_+\|integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	2.50913e-62
CP033096.1\|AYN90922.1\|3126016_3127012_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP033096.1\|AYN90918.1\|3119833_3122095_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP033096.1\|AYN90917.1\|3118316_3119600_+\|acyl-CoA-thioesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP033096.1\|AYN90910.1\|3114090_3114876_+\|phage-recombination-protein-Bet	gnl\|CDD\|273871	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet. This model represents the phage recombination protein Bet from a number of phage, including phage lambda. All members of this family are found in phage genomes or in putative prophage regions of bacterial genomes. [Mobile and extrachromosomal element functions, Prophage functions].	1.14724e-64
CP033096.1\|AYN90914.1\|3116286_3116505_+\|TraR/DksA-family-transcriptional-regulator	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	5.87696e-25
CP033096.1\|AYN90919.1\|3122277_3123711_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP033096.1\|AYN90921.1\|3125022_3125976_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
CP033096.1\|AYN90915.1\|3116551_3116830_+\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	1.49652e-15
CP033096.1\|AYN90920.1\|3123786_3124839_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP033096.1\|AYN92309.1\|3115549_3115732_+\|DUF1317-family-protein	gnl\|CDD\|284449	pfam07026, DUF1317, Protein of unknown function (DUF1317). This family consists of several hypothetical bacterial and phage proteins of around 60 residues in length. The function of this family is unknown.	8.71166e-35
CP033096.1\|AYN90925.1\|3129046_3129736_-\|molybdenum-ABC-transporter-permease	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
CP033096.1\|AYN90926.1\|3129735_3130509_-\|molybdate-binding-periplasmic-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0

>CP033096.1|AYN90917.1|3118316_3119600_+|acyl-CoA-thioesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP033096.1|AYN90916.1|3117111_3118182_+|integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDVLGISMKETLDKCKKILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>CP033096.1|AYN92310.1|3116915_3117134_+|excisionase
MYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPIKDGREYLFHESAVKVDLNRPVTGSLLKRIKNGKKAKS
>CP033096.1|AYN90915.1|3116551_3116830_+|DUF4222-domain-containing-protein
MFRIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFRFNHDFEPVNKADADRIAEEIETAEHIKKLRDMRSKSRGNHGIIQPHTR
>CP033096.1|AYN90914.1|3116286_3116505_+|TraR/DksA-family-transcriptional-regulator
MADIIDSASEIEELQRNTAIKMRRPNHQAISATHCCECGDPIDERRRLAVQGCRTCASCQEEIELKNKQWGL
>CP033096.1|AYN90913.1|3115906_3116188_+|hypothetical-protein
MHFSGSGLHILCAYACRHGTCSMTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGAFKER
>CP033096.1|AYN90912.1|3115704_3115896_+|DUF1382-family-protein
MHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADERDQV
>CP033096.1|AYN92309.1|3115549_3115732_+|DUF1317-family-protein
MKHPHDNIRVGAITFVYSVTKRGWVFPGLSVIRNPLKAQRLAEEINNKRGAVCTKHLPLS
>CP033096.1|AYN90911.1|3114872_3115553_+|exonuclease
MTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARALFEFTSGVNVTESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERDEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
>CP033096.1|AYN90910.1|3114090_3114876_+|phage-recombination-protein-Bet
MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKASEQKVAA
>CP033096.1|AYN90918.1|3119833_3122095_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP033096.1|AYN90919.1|3122277_3123711_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP033096.1|AYN90920.1|3123786_3124839_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP033096.1|AYN90921.1|3125022_3125976_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>CP033096.1|AYN90922.1|3126016_3127012_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP033096.1|AYN90923.1|3127166_3127985_+|pyridoxal-phosphate-phosphatase-YbhA
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP033096.1|AYN90924.1|3127985_3129044_-|molybdenum-import-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>CP033096.1|AYN90925.1|3129046_3129736_-|molybdenum-ABC-transporter-permease
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP033096.1|AYN90926.1|3129735_3130509_-|molybdate-binding-periplasmic-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>CP033096.1|AYN90927.1|3130675_3130825_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Crispr_ID: CP033096_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_9

3366523-3366619

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_9

>merge|CP033096|9|3366523-3366619|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>CP033096|9|9|3366523-3366619|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN91130.1\|3374508_3375810_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
CP033096.1\|AYN91131.1\|3375866_3377228_-\|cyclic-amidohydrolase	unknown	unknown	gnl\|CDD\|169193
CP033096.1\|AYN91117.1\|3361111_3361324_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
CP033096.1\|AYN91114.1\|3358318_3359011_-\|fimbrial-chaperone-SfmC	unknown	unknown	gnl\|CDD\|185117
CP033096.1\|AYN91123.1\|3365390_3366458_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP033096.1\|AYN91128.1\|3371687_3372704_+\|IS5-like-element-IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
CP033096.1\|AYN91120.1\|3363547_3364042_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|182734
CP033096.1\|AYN91118.1\|3361431_3361953_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
CP033096.1\|AYN91124.1\|3366652_3367546_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP033096.1\|AYN91127.1\|3369637_3371305_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
CP033096.1\|AYN91125.1\|3367542_3368358_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
CP033096.1\|AYN91115.1\|3359230_3359773_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
CP033096.1\|AYN91116.1\|3360243_3361110_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|236760
CP033096.1\|AYN91129.1\|3373341_3374487_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|182152
CP033096.1\|AYN91122.1\|3364884_3365394_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
CP033096.1\|AYN91126.1\|3368368_3369628_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
CP033096.1\|AYN91119.1\|3361988_3363374_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
CP033096.1\|AYN91133.1\|3378910_3379789_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|185019
CP033096.1\|AYN91132.1\|3377287_3378742_-\|putative-allantoin-permease	unknown	unknown	gnl\|CDD\|183106
CP033096.1\|AYN91121.1\|3364044_3364767_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|235420

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN91130.1\|3374508_3375810_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
CP033096.1\|AYN91131.1\|3375866_3377228_-\|cyclic-amidohydrolase	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
CP033096.1\|AYN91117.1\|3361111_3361324_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
CP033096.1\|AYN91114.1\|3358318_3359011_-\|fimbrial-chaperone-SfmC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
CP033096.1\|AYN91123.1\|3365390_3366458_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
CP033096.1\|AYN91128.1\|3371687_3372704_+\|IS5-like-element-IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	2.06978e-54
CP033096.1\|AYN91120.1\|3363547_3364042_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP033096.1\|AYN91118.1\|3361431_3361953_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
CP033096.1\|AYN91124.1\|3366652_3367546_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP033096.1\|AYN91127.1\|3369637_3371305_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
CP033096.1\|AYN91125.1\|3367542_3368358_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.19061e-37
CP033096.1\|AYN91115.1\|3359230_3359773_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
CP033096.1\|AYN91116.1\|3360243_3361110_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP033096.1\|AYN91129.1\|3373341_3374487_-\|glycerate-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP033096.1\|AYN91122.1\|3364884_3365394_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	2.09217e-91
CP033096.1\|AYN91126.1\|3368368_3369628_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
CP033096.1\|AYN91119.1\|3361988_3363374_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP033096.1\|AYN91133.1\|3378910_3379789_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|185019	PRK15059, PRK15059, 2-hydroxy-3-oxopropionate reductase.	0
CP033096.1\|AYN91132.1\|3377287_3378742_-\|putative-allantoin-permease	gnl\|CDD\|183106	PRK11375, PRK11375, putative allantoin permease.	0
CP033096.1\|AYN91121.1\|3364044_3364767_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165

>CP033096.1|AYN91123.1|3365390_3366458_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP033096.1|AYN91122.1|3364884_3365394_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRNAQTDEVLENPDPRGAA
>CP033096.1|AYN91121.1|3364044_3364767_+|UDP-2,3-diacylglucosamine-hydrolase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP033096.1|AYN91120.1|3363547_3364042_+|peptidyl-prolyl-cis-trans-isomerase
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP033096.1|AYN91119.1|3361988_3363374_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP033096.1|AYN91118.1|3361431_3361953_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>CP033096.1|AYN91117.1|3361111_3361324_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP033096.1|AYN91116.1|3360243_3361110_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP033096.1|AYN91115.1|3359230_3359773_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP033096.1|AYN91114.1|3358318_3359011_-|fimbrial-chaperone-SfmC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>CP033096.1|AYN91124.1|3366652_3367546_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSGGKPAWIGALSRIEETLAGEAGTCISL
>CP033096.1|AYN91125.1|3367542_3368358_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQCAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP033096.1|AYN91126.1|3368368_3369628_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP033096.1|AYN91127.1|3369637_3371305_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATSNDICVTIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLITDLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>CP033096.1|AYN91128.1|3371687_3372704_+|IS5-like-element-IS5-family-transposase
MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
>CP033096.1|AYN91129.1|3373341_3374487_-|glycerate-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP033096.1|AYN91130.1|3374508_3375810_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>CP033096.1|AYN91131.1|3375866_3377228_-|cyclic-amidohydrolase
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>CP033096.1|AYN91132.1|3377287_3378742_-|putative-allantoin-permease
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG
>CP033096.1|AYN91133.1|3378910_3379789_-|2-hydroxy-3-oxopropionate-reductase
MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA

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Crispr_ID: CP033096_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_10

3507385-3507529

Orphan

Consensus_repeat	Method
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_10

>merge|CP033096|10|3507385-3507529|CRISPRCasFinder
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATCGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

>CP033096|10|10|3507385-3507529|CRISPRCasFinder
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	CGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACC
TTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN91242.1\|3501652_3502855_+\|exonuclease-sbcCD-subunit-D	unknown	unknown	gnl\|CDD\|182871
CP033096.1\|AYN91248.1\|3511675_3512200_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|235153
CP033096.1\|AYN91235.1\|3492523_3493594_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
CP033096.1\|AYN91247.1\|3511434_3511626_-\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
CP033096.1\|AYN91237.1\|3494272_3496087_-\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
CP033096.1\|AYN91251.1\|3513786_3514902_-\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
CP033096.1\|AYN91246.1\|3510499_3511177_-\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
CP033096.1\|AYN91252.1\|3515003_3515324_-\|phosphate-starvation-inducible-protein-PsiF	unknown	unknown	gnl\|CDD\|183165
CP033096.1\|AYN91240.1\|3499420_3500716_-\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182895
CP033096.1\|AYN91241.1\|3500773_3501463_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|182277
CP033096.1\|AYN91245.1\|3510143_3510428_-\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
CP033096.1\|AYN91238.1\|3496245_3497619_-\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
CP033096.1\|AYN92320.1\|3508585_3509497_+\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|234726
CP033096.1\|AYN91249.1\|3512376_3512841_-\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
CP033096.1\|AYN91250.1\|3512960_3513770_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
CP033096.1\|AYN91239.1\|3497694_3499014_-\|branched-chain-amino-acid-transport-system-2-carrier-protein	unknown	unknown	gnl\|CDD\|185331
CP033096.1\|AYN91243.1\|3502851_3505998_+\|nuclease-SbcCD-subunit-C	unknown	unknown	gnl\|CDD\|182330
CP033096.1\|AYN92319.1\|3506123_3507308_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|182234
CP033096.1\|AYN91244.1\|3507552_3508461_-\|fructokinase	unknown	unknown	gnl\|CDD\|236565
CP033096.1\|AYN91236.1\|3493686_3494268_+\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN91242.1\|3501652_3502855_+\|exonuclease-sbcCD-subunit-D	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
CP033096.1\|AYN91248.1\|3511675_3512200_-\|shikimate-kinase	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108
CP033096.1\|AYN91235.1\|3492523_3493594_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
CP033096.1\|AYN91247.1\|3511434_3511626_-\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
CP033096.1\|AYN91237.1\|3494272_3496087_-\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
CP033096.1\|AYN91251.1\|3513786_3514902_-\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
CP033096.1\|AYN91246.1\|3510499_3511177_-\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	2.25423e-119
CP033096.1\|AYN91252.1\|3515003_3515324_-\|phosphate-starvation-inducible-protein-PsiF	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	4.64667e-55
CP033096.1\|AYN91240.1\|3499420_3500716_-\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
CP033096.1\|AYN91241.1\|3500773_3501463_-\|DNA-binding-response-regulator	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
CP033096.1\|AYN91245.1\|3510143_3510428_-\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
CP033096.1\|AYN91238.1\|3496245_3497619_-\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP033096.1\|AYN92320.1\|3508585_3509497_+\|recombination-associated-protein-RdgC	gnl\|CDD\|234726	PRK00321, rdgC, recombination associated protein; Reviewed.	0
CP033096.1\|AYN91249.1\|3512376_3512841_-\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	3.53224e-80
CP033096.1\|AYN91250.1\|3512960_3513770_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
CP033096.1\|AYN91239.1\|3497694_3499014_-\|branched-chain-amino-acid-transport-system-2-carrier-protein	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
CP033096.1\|AYN91243.1\|3502851_3505998_+\|nuclease-SbcCD-subunit-C	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
CP033096.1\|AYN92319.1\|3506123_3507308_+\|MFS-transporter	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
CP033096.1\|AYN91244.1\|3507552_3508461_-\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
CP033096.1\|AYN91236.1\|3493686_3494268_+\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	5.08651e-135

>CP033096.1|AYN92319.1|3506123_3507308_+|MFS-transporter
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>CP033096.1|AYN91243.1|3502851_3505998_+|nuclease-SbcCD-subunit-C
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>CP033096.1|AYN91242.1|3501652_3502855_+|exonuclease-sbcCD-subunit-D
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLTAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
>CP033096.1|AYN91241.1|3500773_3501463_-|DNA-binding-response-regulator
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>CP033096.1|AYN91240.1|3499420_3500716_-|PAS-domain-containing-sensor-histidine-kinase
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSIEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>CP033096.1|AYN91239.1|3497694_3499014_-|branched-chain-amino-acid-transport-system-2-carrier-protein
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>CP033096.1|AYN91238.1|3496245_3497619_-|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>CP033096.1|AYN91237.1|3494272_3496087_-|maltodextrin-glucosidase
MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNLESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>CP033096.1|AYN91236.1|3493686_3494268_+|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYVREQVMTILPNSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>CP033096.1|AYN91235.1|3492523_3493594_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE
>CP033096.1|AYN91244.1|3507552_3508461_-|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>CP033096.1|AYN92320.1|3508585_3509497_+|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELVALIQNLIEGLGGEAQR
>CP033096.1|AYN91245.1|3510143_3510428_-|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>CP033096.1|AYN91246.1|3510499_3511177_-|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNHLAHVSRRKVERDLQGVVEVLDNQGYDVIILMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>CP033096.1|AYN91247.1|3511434_3511626_-|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>CP033096.1|AYN91248.1|3511675_3512200_-|shikimate-kinase
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>CP033096.1|AYN91249.1|3512376_3512841_-|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAAINPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRGQM
>CP033096.1|AYN91250.1|3512960_3513770_+|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>CP033096.1|AYN91251.1|3513786_3514902_-|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA
>CP033096.1|AYN91252.1|3515003_3515324_-|phosphate-starvation-inducible-protein-PsiF
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA

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Crispr_ID: CP033096_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_12

3890675-3890816

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_12

>merge|CP033096|12|3890675-3890816|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>CP033096|12|12|3890675-3890816|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN91572.1\|3900333_3903150_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
CP033096.1\|AYN91555.1\|3878751_3880038_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
CP033096.1\|AYN91567.1\|3896345_3897167_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
CP033096.1\|AYN91569.1\|3898313_3899264_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
CP033096.1\|AYN91562.1\|3889255_3890041_+\|carnitinyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|179599
CP033096.1\|AYN91564.1\|3890845_3891241_-\|transcriptional-activatory-protein-CaiF	unknown	unknown	gnl\|CDD\|183154
CP033096.1\|AYN91561.1\|3887593_3889147_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
CP033096.1\|AYN91558.1\|3883486_3885001_+\|L-carnitine/gamma-butyrobetaine-antiporter	unknown	unknown	gnl\|CDD\|179568
CP033096.1\|AYN91557.1\|3881820_3882837_-\|IS5-like-element-IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
CP033096.1\|AYN91573.1\|3903192_3904134_-\|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	unknown	unknown	gnl\|CDD\|235536
CP033096.1\|AYN91565.1\|3891502_3894724_-\|carbamoyl-phosphate-synthase-large-chain	unknown	unknown	gnl\|CDD\|235393
CP033096.1\|AYN91563.1\|3890046_3890637_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
CP033096.1\|AYN91560.1\|3886302_3887520_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
CP033096.1\|AYN91554.1\|3878467_3878755_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
CP033096.1\|AYN91568.1\|3897333_3898248_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
CP033096.1\|AYN91566.1\|3894741_3895890_-\|carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
CP033096.1\|AYN91559.1\|3885031_3886174_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
CP033096.1\|AYN91570.1\|3899265_3899715_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
CP033096.1\|AYN91556.1\|3880088_3881030_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
CP033096.1\|AYN91571.1\|3899839_3900334_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN91572.1\|3900333_3903150_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
CP033096.1\|AYN91555.1\|3878751_3880038_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
CP033096.1\|AYN91567.1\|3896345_3897167_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	2.21003e-141
CP033096.1\|AYN91569.1\|3898313_3899264_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
CP033096.1\|AYN91562.1\|3889255_3890041_+\|carnitinyl-CoA-dehydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
CP033096.1\|AYN91564.1\|3890845_3891241_-\|transcriptional-activatory-protein-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
CP033096.1\|AYN91561.1\|3887593_3889147_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
CP033096.1\|AYN91558.1\|3883486_3885001_+\|L-carnitine/gamma-butyrobetaine-antiporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
CP033096.1\|AYN91557.1\|3881820_3882837_-\|IS5-like-element-IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	2.06978e-54
CP033096.1\|AYN91573.1\|3903192_3904134_-\|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.26241e-173
CP033096.1\|AYN91565.1\|3891502_3894724_-\|carbamoyl-phosphate-synthase-large-chain	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
CP033096.1\|AYN91563.1\|3890046_3890637_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
CP033096.1\|AYN91560.1\|3886302_3887520_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
CP033096.1\|AYN91554.1\|3878467_3878755_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
CP033096.1\|AYN91568.1\|3897333_3898248_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
CP033096.1\|AYN91566.1\|3894741_3895890_-\|carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
CP033096.1\|AYN91559.1\|3885031_3886174_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
CP033096.1\|AYN91570.1\|3899265_3899715_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
CP033096.1\|AYN91556.1\|3880088_3881030_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
CP033096.1\|AYN91571.1\|3899839_3900334_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76

>CP033096.1|AYN91563.1|3890046_3890637_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>CP033096.1|AYN91562.1|3889255_3890041_+|carnitinyl-CoA-dehydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>CP033096.1|AYN91561.1|3887593_3889147_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>CP033096.1|AYN91560.1|3886302_3887520_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>CP033096.1|AYN91559.1|3885031_3886174_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>CP033096.1|AYN91558.1|3883486_3885001_+|L-carnitine/gamma-butyrobetaine-antiporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>CP033096.1|AYN91557.1|3881820_3882837_-|IS5-like-element-IS5-family-transposase
MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH
>CP033096.1|AYN91556.1|3880088_3881030_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRIIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENMALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>CP033096.1|AYN91555.1|3878751_3880038_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>CP033096.1|AYN91554.1|3878467_3878755_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>CP033096.1|AYN91564.1|3890845_3891241_-|transcriptional-activatory-protein-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>CP033096.1|AYN91565.1|3891502_3894724_-|carbamoyl-phosphate-synthase-large-chain
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>CP033096.1|AYN91566.1|3894741_3895890_-|carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEAILPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>CP033096.1|AYN91567.1|3896345_3897167_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL
>CP033096.1|AYN91568.1|3897333_3898248_-|ribonucleoside-hydrolase-RihC
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGKSGMAGYDFVEHNRKPLEVPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPHIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLNVKGFQQWVADLLALVP
>CP033096.1|AYN91569.1|3898313_3899264_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>CP033096.1|AYN91570.1|3899265_3899715_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>CP033096.1|AYN91571.1|3899839_3900334_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>CP033096.1|AYN91572.1|3900333_3903150_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTRDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>CP033096.1|AYN91573.1|3903192_3904134_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Crispr_ID: CP033096_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033096_13

4033689-4033838

Orphan

Consensus_repeat	Method
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033096_13

>merge|CP033096|13|4033689-4033838|CRISPRCasFinder
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAATGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACAGCACCGAACTCGTAGGCCTGATAAGACGCG

>CP033096|13|13|4033689-4033838|CRISPRCasFinder
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	CAAGCGTCGCATCAGGCAATGCTGTTATTGTCGGATGCGGCA
TGAACGCCTTATCCGACCTACACAGCACCGAACTCGTAGGCCTGATAAGACGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP033096.1\|AYN91699.1\|4043258_4043852_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP033096.1\|AYN91683.1\|4024735_4025065_-\|outer-membrane-usher-protein-focD	unknown	unknown	gnl\|CDD\|237919
CP033096.1\|AYN91696.1\|4040978_4041209_-\|hypothetical-protein	unknown	unknown	unknown
CP033096.1\|AYN91684.1\|4025805_4026519_-\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
CP033096.1\|AYN91697.1\|4041195_4042539_-\|DNA-binding-protein	unknown	unknown	unknown
CP033096.1\|AYN91682.1\|4023678_4024182_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
CP033096.1\|AYN91687.1\|4029691_4030774_-\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
CP033096.1\|AYN91685.1\|4026921_4027941_+\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
CP033096.1\|AYN91688.1\|4030773_4031874_-\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
CP033096.1\|AYN91689.1\|4032140_4033652_+\|cytosol-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
CP033096.1\|AYN91680.1\|4021921_4022230_-\|hypothetical-protein	unknown	unknown	unknown
CP033096.1\|AYN91686.1\|4028070_4029573_+\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
CP033096.1\|AYN91690.1\|4034005_4034449_+\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
CP033096.1\|AYN91691.1\|4034448_4037304_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP033096.1\|AYN91692.1\|4037357_4038554_-\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
CP033096.1\|AYN91693.1\|4038746_4039250_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP033096.1\|AYN91695.1\|4039873_4040878_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
CP033096.1\|AYN91681.1\|4022756_4023659_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|370330
CP033096.1\|AYN91698.1\|4042661_4043114_-\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
CP033096.1\|AYN91694.1\|4039295_4039712_-\|regulator-of-ribonuclease-activity-B	unknown	unknown	gnl\|CDD\|236876

Protein	Function_ID	Function_description	E-value
CP033096.1\|AYN91699.1\|4043258_4043852_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.08896e-10
CP033096.1\|AYN91683.1\|4024735_4025065_-\|outer-membrane-usher-protein-focD	gnl\|CDD\|237919	PRK15193, PRK15193, outer membrane usher protein; Provisional.	9.38393e-40
CP033096.1\|AYN91684.1\|4025805_4026519_-\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.93455e-43
CP033096.1\|AYN91682.1\|4023678_4024182_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.99026e-18
CP033096.1\|AYN91687.1\|4029691_4030774_-\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP033096.1\|AYN91685.1\|4026921_4027941_+\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.56277e-168
CP033096.1\|AYN91688.1\|4030773_4031874_-\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
CP033096.1\|AYN91689.1\|4032140_4033652_+\|cytosol-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
CP033096.1\|AYN91698.1\|4042661_4043114_-\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.50239e-70
CP033096.1\|AYN91686.1\|4028070_4029573_+\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP033096.1\|AYN91690.1\|4034005_4034449_+\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
CP033096.1\|AYN91691.1\|4034448_4037304_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP033096.1\|AYN91692.1\|4037357_4038554_-\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	2.29033e-149
CP033096.1\|AYN91693.1\|4038746_4039250_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.73712e-19
CP033096.1\|AYN91695.1\|4039873_4040878_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
CP033096.1\|AYN91681.1\|4022756_4023659_-\|fimbrial-protein	gnl\|CDD\|370330	pfam09160, FimH_man-bind, FimH, mannose binding. Members of this family adopt a secondary structure consisting of a beta sandwich, with nine strands arranged in two sheets in a Greek key topology. They are predominantly found in bacterial mannose-specific adhesins, since they are capable of binding to D-mannose.	1.66415e-68
CP033096.1\|AYN91694.1\|4039295_4039712_-\|regulator-of-ribonuclease-activity-B	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69

>CP033096.1|AYN91689.1|4032140_4033652_+|cytosol-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>CP033096.1|AYN91688.1|4030773_4031874_-|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>CP033096.1|AYN91687.1|4029691_4030774_-|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>CP033096.1|AYN91686.1|4028070_4029573_+|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAEHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDVKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPAAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>CP033096.1|AYN91685.1|4026921_4027941_+|NAD(P)-dependent-alcohol-dehydrogenase
MSMIKSYAAKEAGGELEVYEYDTGELKPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVSTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>CP033096.1|AYN91684.1|4025805_4026519_-|DUF4102-domain-containing-protein
MSILMSIFADSILLVYSRDTNGRKTIMALTDTKVRSAKSEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLGDNIFPAIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALELKRLR
>CP033096.1|AYN91683.1|4024735_4025065_-|outer-membrane-usher-protein-focD
MNKLESLPVVPTRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR
>CP033096.1|AYN91682.1|4023678_4024182_-|type-1-fimbrial-protein
MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
>CP033096.1|AYN91681.1|4022756_4023659_-|fimbrial-protein
MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTVDAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ
>CP033096.1|AYN91680.1|4021921_4022230_-|hypothetical-protein
MSHPLINNHRLPFAAICSNNHESEILVMWLTNFRIRVDMSYQKVELIRHLIRCNATAAVWLFIRIPKQLQGSASLCCGTHYVKEEKSWNRPGAGTAQTIRFL
>CP033096.1|AYN91690.1|4034005_4034449_+|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>CP033096.1|AYN91691.1|4034448_4037304_+|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>CP033096.1|AYN91692.1|4037357_4038554_-|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSLKGFWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSFVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGIMPSLPFL
>CP033096.1|AYN91693.1|4038746_4039250_+|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
>CP033096.1|AYN91694.1|4039295_4039712_-|regulator-of-ribonuclease-activity-B
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>CP033096.1|AYN91695.1|4039873_4040878_+|ornithine-carbamoyltransferase
MSRFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>CP033096.1|AYN91696.1|4040978_4041209_-|hypothetical-protein
MKQPDFAKWYFYQLLKDYEGEQLYLNELGYVYGNEEKTNEIVKNNPGYVVKIFEEKMVNELKIRTRMMKILRKIYV
>CP033096.1|AYN91697.1|4041195_4042539_-|DNA-binding-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARIAEGQDNTRNILDSKTFLEFLVKIFTLGYVDFSKRSNEAGRNMMAHIESSSYIKNNDGSEIMQFVMNNPEGERADSPKVIIEISLSTITTMGTRQGHTVIIFPQPDGSTNRYEGKSFERKDESSLHLITNKILACYQREANKEIARLLNIPQELNNSQDLNNSQVSCKDSVDSTITDLLEKPLNNALLAIRKEHLLLMPYVCNESISYLLGEKGILKEIDDLNAVNNYLLNNKKATDNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFLKFPYINDVRILDWCFNKRMQYFGDSEKIKYACSVINHIDFSCDQSKDFSCDQSKIKIAETLFFNLDKEHYKNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEVPVSILVNDIFFEGFFHEAT
>CP033096.1|AYN91698.1|4042661_4043114_-|YhcH/YjgK/YiaL-family-protein
MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>CP033096.1|AYN91699.1|4043258_4043852_-|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYIGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAVLAGEAIKTILEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_016160	Escherichia phage HK75, complete genome	28589-28631	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019705	Enterobacteria phage mEpX2, complete genome	29043-29085	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	KY979108	Escherichia phage ECP1, complete genome	424-466	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019719	Enterobacteria phage HK633, complete genome	31737-31779	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	JF974339	Enterobacteria phage IME10, complete genome	9720-9762	0	1.0
CP033096_6	6.1\|2811153\|40\|CP033096\|CRISPRCasFinder	2811153-2811192	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_005344	Enterobacteria phage Sf6, complete genome	28407-28449	1	0.977
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019715	Enterobacterial phage mEp234, complete genome	30405-30447	1	0.977
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019711	Enterobacteria phage HK629, complete genome	37166-37208	1	0.977
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019769	Enterobacteria phage HK542, complete genome	29172-29214	1	0.977
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_019768	Enterobacteria phage HK106, complete genome	32701-32743	1	0.977
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
CP033096_2	2.7\|1026523\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026523-1026554	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
CP033096_5	5.1\|2140111\|38\|CP033096\|CRISPRCasFinder	2140111-2140148	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP033096_1	1.3\|1006650\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1006650-1006681	32	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	118383-118414	5	0.844
CP033096_1	1.3\|1006650\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1006650-1006681	32	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	118389-118420	5	0.844
CP033096_1	1.3\|1006650\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1006650-1006681	32	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	118373-118404	5	0.844
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	MW013502	Salmonella virus L cI-40 13-am43, complete genome	31669-31711	5	0.884
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	NC_004348	Enterobacteria phage ST64T, complete genome	14871-14913	5	0.884
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	MW013503	Salmonella virus L cII-101, complete genome	31670-31712	5	0.884
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	14871-14913	5	0.884
CP033096_3	3.1\|1408078\|43\|CP033096\|CRISPRCasFinder	1408078-1408120	43	MF188997	Salmonella phage vB_SalP_PM43, complete genome	14766-14808	5	0.884
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
CP033096_2	2.1\|1026157\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026157-1026188	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	32038-32069	8	0.75
CP033096_2	2.1\|1026157\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026157-1026188	32	JX307704	Mycobacterium virus Goose, complete genome	32135-32166	8	0.75
CP033096_2	2.3\|1026279\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026279-1026310	32	NZ_CP042402	Weissella hellenica strain CBA3632 plasmid unnamed3, complete sequence	12282-12313	8	0.75
CP033096_2	2.4\|1026340\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026340-1026371	32	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	458381-458412	8	0.75
CP033096_2	2.4\|1026340\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026340-1026371	32	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	130817-130848	8	0.75
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
CP033096_2	2.3\|1026279\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026279-1026310	32	CP003185	Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome	44776-44807	9	0.719
CP033096_2	2.3\|1026279\|32\|CP033096\|PILER-CR,CRISPRCasFinder,CRT	1026279-1026310	32	NC_019956	Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence	105005-105036	9	0.719
CP033096_7	7.3\|2952865\|33\|CP033096\|CRISPRCasFinder,CRT	2952865-2952897	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
CP033096_7	7.5\|2952866\|32\|CP033096\|PILER-CR	2952866-2952897	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
CP033096_10	10.1\|3507428\|59\|CP033096\|CRISPRCasFinder	3507428-3507486	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
CP033096_12	12.1\|3890727\|38\|CP033096\|CRISPRCasFinder	3890727-3890764	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
CP033096_10	10.1\|3507428\|59\|CP033096\|CRISPRCasFinder	3507428-3507486	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814

1. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 0, identity: 1.0

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
*******************************************

26. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 0, identity: 1.0

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
*******************************************

27. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 0, identity: 1.0

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
*******************************************

28. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 0, identity: 1.0

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
*******************************************

29. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 0, identity: 1.0

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
*******************************************

30. spacer 6.1|2811153|40|CP033096|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

31. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 1, identity: 0.977

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
tttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	Protospacer
 ******************************************

32. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019715 (Enterobacterial phage mEp234, complete genome) position: , mismatch: 1, identity: 0.977

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggatctcagcgga	Protospacer
******************************** **********

33. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 1, identity: 0.977

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcgtctctcagcgga	Protospacer
******************************* ***********

34. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019769 (Enterobacteria phage HK542, complete genome) position: , mismatch: 1, identity: 0.977

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggtgcggctctcagcgga	Protospacer
***************************.***************

35. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_019768 (Enterobacteria phage HK106, complete genome) position: , mismatch: 1, identity: 0.977

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gttgtccaacgcaaacaccagtaatggcgcggatctcagcgga	Protospacer
******************************** **********

36. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

37. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

38. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

39. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

40. spacer 2.7|1026523|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

41. spacer 5.1|2140111|38|CP033096|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

42. spacer 1.3|1006650|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

43. spacer 1.3|1006650|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

44. spacer 1.3|1006650|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

45. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 5, identity: 0.884

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gatgtccaacgcaaacaccagtaatgacgcggctcacagcaaa	Protospacer
* ************************.******** ****..*

46. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 5, identity: 0.884

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gatgtccaacgcaaacaccagtaatgacgcggctcacagcaaa	Protospacer
* ************************.******** ****..*

47. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 5, identity: 0.884

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gatgtccaacgcaaacaccagtaatgacgcggctcacagcaaa	Protospacer
* ************************.******** ****..*

48. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 5, identity: 0.884

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gatgtccaacgcaaacaccagtaatgacgcggctcacagcaaa	Protospacer
* ************************.******** ****..*

49. spacer 3.1|1408078|43|CP033096|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 5, identity: 0.884

gttgtccaacgcaaacaccagtaatggcgcggctctcagcgga	CRISPR spacer
gatgtccaacgcaaacaccagtaatgacgcggctcacagcaaa	Protospacer
* ************************.******** ****..*

50. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

51. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

52. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

53. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

54. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

55. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

56. spacer 2.1|1026157|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

57. spacer 2.1|1026157|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

58. spacer 2.3|1026279|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042402 (Weissella hellenica strain CBA3632 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
gtaataaaaaatctactatttctgattttaga	Protospacer
************ * ********* *     *

59. spacer 2.4|1026340|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cttgcgagcaaaagatccaggccgagaaagac	CRISPR spacer
aagccgagcaaaagatccaggcggtgaagggc	Protospacer
    ****************** * ***.*.*

60. spacer 2.4|1026340|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cttgcgagcaaaagatccaggccgagaaagac	CRISPR spacer
aagccgagcaaaagatccaggcggtgaagggc	Protospacer
    ****************** * ***.*.*

61. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

62. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

63. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

64. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

65. spacer 2.3|1026279|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to CP003185 (Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome) position: , mismatch: 9, identity: 0.719

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
ataataaataatattctgtttctgtgtgttta	Protospacer
.******* ********.******.  . *.*

66. spacer 2.3|1026279|32|CP033096|PILER-CR,CRISPRCasFinder,CRT matches to NC_019956 (Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence) position: , mismatch: 9, identity: 0.719

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
ataataaataatattctgtttctgtgtgttta	Protospacer
.******* ********.******.  . *.*

67. spacer 7.3|2952865|33|CP033096|CRISPRCasFinder,CRT matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

68. spacer 7.5|2952866|32|CP033096|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

69. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

70. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

71. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

72. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

73. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

74. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

75. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

76. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

77. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

78. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

79. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

80. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

81. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

82. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

83. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

84. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

85. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

86. spacer 10.1|3507428|59|CP033096|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

87. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

88. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

89. spacer 12.1|3890727|38|CP033096|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

90. spacer 10.1|3507428|59|CP033096|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1034008 : 1047191

Escherichia_phage(40.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN89036.1\|1034008_1034770_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
AYN89037.1\|1034763_1035390_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
AYN89038.1\|1035529_1036669_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
AYN89039.1\|1036731_1037724_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
AYN89040.1\|1037817_1039182_-	GntP family transporter	NA	NA	NA	NA
AYN89041.1\|1039270_1040047_-	HPr family phosphocarrier protein	NA	NA	NA	NA
AYN89042.1\|1040051_1040690_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AYN89043.1\|1040686_1041949_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	8.3e-135	61.0
AYN89044.1\|1041945_1042854_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AYN89045.1\|1043049_1043817_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
AYN89046.1\|1043867_1044524_-	protein-serine/threonine phosphatase	K7P7V3	Enterobacteria_phage	3.3e-50	45.8
AYN89047.1\|1044629_1047191_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_2

1385172 : 1472591

103

Enterobacteria_phage(40.91%)

tail,lysis,terminase,head,transposase,tRNA,capsid,protease,holin,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN89341.1\|1385172_1386096_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.8e-177	99.7
AYN89342.1\|1386977_1388123_+	acetyl-CoA--oxalate CoA-transferase	NA	NA	NA	NA
AYN89343.1\|1388178_1391772_-	sensor protein EvgS	W8CYM9	Bacillus_phage	1.1e-09	40.0
AYN89344.1\|1391776_1392391_-	DNA-binding response regulator	NA	NA	NA	NA
AYN89345.1\|1392806_1393970_+	multidrug resistance protein EmrK	NA	NA	NA	NA
AYN89346.1\|1393969_1395508_+	multidrug resistance protein EmrY	NA	NA	NA	NA
AYN89347.1\|1395615_1396944_-	D-serine dehydratase	NA	NA	NA	NA
AYN89348.1\|1396961_1398299_-	DsdX permease	NA	NA	NA	NA
AYN89349.1\|1398516_1399452_+	DNA-binding transcriptional regulator DsdC	NA	NA	NA	NA
AYN89350.1\|1399635_1399836_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AYN89351.1\|1399893_1400061_-	hypothetical protein	A5VWB7	Enterobacteria_phage	3.7e-27	98.2
AYN92234.1\|1399993_1400197_+	hypothetical protein	NA	NA	NA	NA
AYN89352.1\|1400161_1400794_-	DUF551 domain-containing protein	A5VWB3	Enterobacteria_phage	5.0e-64	60.6
AYN89353.1\|1400790_1400958_-	DUF2737 family protein	K7PJY9	Enterobacterial_phage	1.3e-24	100.0
AYN89354.1\|1400974_1401289_-	hypothetical protein	K7PLT4	Enterobacteria_phage	1.2e-50	100.0
AYN89355.1\|1401300_1401783_-	siphovirus Gp157 family protein	K7P6T5	Enterobacteria_phage	8.4e-80	99.4
AYN89356.1\|1401766_1402678_-	DNA recombinase	K7PKG9	Enterobacteria_phage	4.8e-169	99.0
AYN89357.1\|1402674_1402983_-	hypothetical protein	K7PJM4	Enterobacteria_phage	3.3e-53	99.0
AYN89358.1\|1403067_1403220_-	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	1.4e-20	98.0
AYN89359.1\|1403204_1403339_-	hypothetical protein	K7PHK2	Enterobacteria_phage	1.2e-15	97.7
AYN89360.1\|1403573_1403756_-	hypothetical protein	K7PLQ2	Enterobacteria_phage	3.0e-30	96.7
AYN89361.1\|1404046_1404409_-	antitermination protein	G9L671	Escherichia_phage	1.1e-50	84.3
AYN89362.1\|1404852_1405473_-	hypothetical protein	A4KWT4	Enterobacteria_phage	3.3e-52	100.0
AYN89363.1\|1405469_1405904_-	hypothetical protein	A4KWT5	Enterobacteria_phage	1.2e-77	100.0
AYN89364.1\|1406005_1406710_-	helix-turn-helix transcriptional regulator	A0A0P0ZE37	Stx2-converting_phage	1.9e-133	99.6
AYN89365.1\|1406823_1407057_+	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	8.0e-36	100.0
AYN89366.1\|1407193_1407490_+	hypothetical protein	Q9MCQ0	Enterobacteria_phage	1.8e-48	100.0
AYN89367.1\|1407670_1408561_+	DNA replication protein	G5DA89	Enterobacteria_phage	3.4e-159	99.7
AYN89368.1\|1408535_1409987_+	helicase DnaB	Q7Y2K5	Escherichia_phage	8.6e-277	99.4
AYN89369.1\|1410068_1410680_+	hypothetical protein	A0A2I6PIF0	Escherichia_phage	5.6e-113	100.0
AYN89370.1\|1410740_1410968_+	hypothetical protein	A0A1I9LJP7	Stx_converting_phage	6.7e-11	52.9
AYN89371.1\|1410960_1411383_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	4.8e-63	80.7
AYN89372.1\|1411379_1411907_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
AYN89373.1\|1411903_1412086_+	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
AYN89374.1\|1412082_1412253_+	protein ninF	K7P6X0	Enterobacteria_phage	5.5e-26	100.0
AYN89375.1\|1412245_1412971_+	DNA-binding protein	A0A2I6PIF5	Escherichia_phage	1.0e-129	98.8
AYN89376.1\|1412970_1413261_+	DUF1364 domain-containing protein	A0A192Y6R9	Salmonella_phage	1.0e-51	100.0
AYN89377.1\|1413257_1413620_+	RusA family crossover junction endodeoxyribonuclease	K7P6I9	Enterobacteria_phage	7.8e-62	98.3
AYN89378.1\|1413616_1413805_+	protein ninH	K7PH29	Enterobacteria_phage	1.9e-27	100.0
AYN89379.1\|1413801_1414425_+	antitermination protein	K7PM87	Enterobacteria_phage	8.9e-114	99.5
AYN92235.1\|1414566_1414749_-	hypothetical protein	A0A088CPS7	Enterobacteria_phage	1.0e-25	94.9
AYN89380.1\|1414859_1415183_+\|holin	phage holin, lambda family	K7PH31	Enterobacteria_phage	1.1e-51	99.1
AYN89381.1\|1415166_1415643_+	lysozyme	K7P7Y6	Enterobacteria_phage	7.5e-89	100.0
AYN89382.1\|1415626_1416088_+\|lysis	lysis protein	K7P735	Enterobacteria_phage	2.9e-77	99.3
AYN89383.1\|1416286_1416805_+	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	3.2e-93	100.0
AYN89384.1\|1417218_1417569_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	1.5e-62	95.7
AYN89385.1\|1417685_1418189_+\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	1.0e-88	100.0
AYN89386.1\|1418185_1419919_+\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	98.8
AYN89387.1\|1419930_1420113_+	hypothetical protein	S5FXQ9	Shigella_phage	6.5e-25	98.3
AYN89388.1\|1420112_1421354_+\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
AYN89389.1\|1421295_1421982_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.1e-125	100.0
AYN89390.1\|1421996_1423202_+\|capsid	phage major capsid protein	A0A1B5FPI9	Escherichia_phage	8.0e-220	98.0
AYN89391.1\|1423252_1423441_+	hypothetical protein	A0A1B5FP98	Escherichia_phage	3.9e-25	95.2
AYN89392.1\|1423452_1423758_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	3.9e-38	87.1
AYN89393.1\|1423767_1424106_+\|head,tail	head-tail adaptor protein	A0A1B5FP90	Escherichia_phage	4.6e-48	84.8
AYN89394.1\|1424102_1424552_+	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	7.4e-62	78.5
AYN89395.1\|1424548_1424893_+	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	4.2e-57	100.0
AYN89396.1\|1424952_1425657_+\|tail	phage tail protein	A0A1B5FP82	Escherichia_phage	3.0e-110	91.0
AYN89397.1\|1425656_1426043_+\|tail	phage tail protein	A0A1B5FP91	Escherichia_phage	2.6e-63	99.2
AYN92236.1\|1426084_1426345_+	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	7.8e-40	96.5
AYN89398.1\|1426390_1429591_+\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	93.5
AYN89399.1\|1429568_1429925_+\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.8e-40	66.7
AYN89400.1\|1429924_1430623_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.2e-132	97.8
AYN89401.1\|1430628_1431372_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.4e-150	97.6
AYN89402.1\|1431269_1431917_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	4.4e-108	94.4
AYN89403.1\|1431977_1435460_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	88.9
AYN89404.1\|1435526_1436126_+	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	1.2e-110	98.5
AYN89405.1\|1436190_1437213_+	hypothetical protein	A0A2D1UII2	Escherichia_phage	6.0e-59	92.1
AYN89406.1\|1437229_1438549_+	hypothetical protein	A0A1I9KFH7	Aeromonas_phage	4.2e-105	58.2
AYN89407.1\|1438746_1439127_+	DUF4376 domain-containing protein	NA	NA	NA	NA
AYN89408.1\|1439404_1439569_-	hypothetical protein	NA	NA	NA	NA
AYN89409.1\|1439571_1439685_-	virulence protein	S4TND2	Salmonella_phage	4.7e-10	83.8
AYN89410.1\|1439712_1440870_-	DUF4102 domain-containing protein	A5VW56	Enterobacteria_phage	1.8e-221	99.5
AYN89411.1\|1441181_1442114_-	hypothetical protein	E7DYY8	Enterobacteria_phage	5.7e-165	98.7
AYN89412.1\|1442211_1442382_+	hypothetical protein	NA	NA	NA	NA
AYN89413.1\|1442407_1443163_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AYN89414.1\|1443344_1444403_-	hypothetical protein	NA	NA	NA	NA
AYN89415.1\|1444768_1446109_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
AYN89416.1\|1446480_1446765_+	DUF406 family protein	NA	NA	NA	NA
AYN89417.1\|1446945_1448256_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AYN89418.1\|1448255_1450400_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AYN89419.1\|1450602_1451088_+	phosphohistidine phosphatase	NA	NA	NA	NA
AYN89420.1\|1451768_1452332_+	type 1 fimbrial protein	NA	NA	NA	NA
AYN89421.1\|1455078_1455831_+	fimbrial chaperone	NA	NA	NA	NA
AYN89422.1\|1455830_1456343_+	hypothetical protein	NA	NA	NA	NA
AYN89423.1\|1456339_1456828_+	fimbrial protein	NA	NA	NA	NA
AYN89424.1\|1456824_1457364_+	fimbrial protein	NA	NA	NA	NA
AYN89425.1\|1457365_1458187_+	DUF2544 domain-containing protein	NA	NA	NA	NA
AYN89426.1\|1458257_1458809_-	endonuclease SmrB	NA	NA	NA	NA
AYN89427.1\|1458974_1459907_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AYN89428.1\|1459941_1461027_+	chorismate synthase	A0A291AU41	Pandoravirus	2.7e-89	47.5
AYN89429.1\|1461030_1461855_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AYN89430.1\|1461854_1462664_+	hypothetical protein	NA	NA	NA	NA
AYN89431.1\|1462663_1463212_+	elongation factor P hydroxylase	NA	NA	NA	NA
AYN89432.1\|1463245_1463524_+	YfcL family protein	NA	NA	NA	NA
AYN89433.1\|1463644_1465651_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AYN89434.1\|1465809_1467030_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
AYN92237.1\|1467131_1467353_-	hypothetical protein	NA	NA	NA	NA
AYN89435.1\|1467294_1468473_+	MFS transporter	NA	NA	NA	NA
AYN89436.1\|1468469_1469465_-	flagella biosynthesis regulator	NA	NA	NA	NA
AYN89437.1\|1469563_1470700_+	erythronate-4-phosphate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	5.9e-23	28.8
AYN89438.1\|1470765_1471779_+	USG-1 protein	NA	NA	NA	NA
AYN89439.1\|1471778_1472591_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_3

1685375 : 1694817

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN89618.1\|1685375_1686302_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8
AYN89619.1\|1686306_1687038_+	ABC transporter permease	NA	NA	NA	NA
AYN89620.1\|1687018_1687126_-	protein YohO	NA	NA	NA	NA
AYN89621.1\|1687185_1687917_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AYN89622.1\|1688138_1689824_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AYN89623.1\|1689820_1690540_+	DNA-binding response regulator	NA	NA	NA	NA
AYN89624.1\|1690586_1691057_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AYN89625.1\|1691097_1691559_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
AYN89626.1\|1691683_1693684_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6
AYN89627.1\|1693680_1694817_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.0e-160	97.1

DBSCAN-SWA_4

2212759 : 2253715

Escherichia_phage(50.0%)

integrase,transposase,protease

attL 2212723:2212782|attR 2249803:2251002

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2212723:2212782	attL	NA	NA	NA	NA
AYN90094.1\|2212759_2213776_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN90095.1\|2214030_2214201_+	hypothetical protein	NA	NA	NA	NA
AYN90096.1\|2214307_2214673_+	multidrug transporter subunit MdtJ	NA	NA	NA	NA
AYN90097.1\|2214659_2214989_+	spermidine export protein MdtI	NA	NA	NA	NA
AYN90098.1\|2215027_2215849_-\|protease	serine protease	NA	NA	NA	NA
AYN90099.1\|2215948_2216032_-	hypothetical protein	NA	NA	NA	NA
AYN90100.1\|2216124_2216460_-	acid shock protein	NA	NA	NA	NA
AYN90101.1\|2216856_2218110_-	MFS transporter	NA	NA	NA	NA
AYN90102.1\|2218216_2219110_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYN90103.1\|2219244_2220465_+	protein mlc	NA	NA	NA	NA
AYN90104.1\|2220589_2221285_+	dethiobiotin synthase	NA	NA	NA	NA
AYN90105.1\|2221237_2222530_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
AYN90106.1\|2222688_2223303_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AYN90107.1\|2223345_2224200_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
AYN90108.1\|2224201_2224819_-	dimethylsulfoxide reductase	A0A077SL61	Escherichia_phage	9.5e-76	59.6
AYN92269.1\|2224829_2227253_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	4.8e-208	48.5
AYN90109.1\|2227313_2228480_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.6e-84	46.9
AYN90110.1\|2228669_2230028_+\|integrase	site-specific integrase	NA	NA	NA	NA
AYN90111.1\|2230312_2231526_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
AYN90112.1\|2231644_2232112_+	hypothetical protein	NA	NA	NA	NA
AYN92270.1\|2232652_2232934_+	hypothetical protein	NA	NA	NA	NA
AYN90113.1\|2232923_2233424_+	hypothetical protein	NA	NA	NA	NA
AYN90114.1\|2233700_2234192_+	hypothetical protein	NA	NA	NA	NA
AYN90115.1\|2234276_2235263_+	hypothetical protein	NA	NA	NA	NA
AYN90116.1\|2235717_2235918_+	hypothetical protein	NA	NA	NA	NA
AYN90117.1\|2236060_2237518_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-120	49.9
AYN90118.1\|2237716_2238022_-	DUF1161 domain-containing protein	NA	NA	NA	NA
AYN92271.1\|2238129_2238810_+	YnfC family lipoprotein	NA	NA	NA	NA
AYN90119.1\|2238842_2239403_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
AYN90120.1\|2239437_2239779_-	DUF1283 family protein	NA	NA	NA	NA
AYN90121.1\|2239913_2240240_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
AYN90122.1\|2240445_2241660_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
AYN90123.1\|2241671_2242691_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	3.7e-16	25.9
AYN90124.1\|2242748_2242859_+	transporter	NA	NA	NA	NA
AYN90125.1\|2242878_2244174_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	7.4e-155	62.1
AYN90126.1\|2244193_2244445_-	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AYN90127.1\|2244517_2246989_-	exonuclease	A0A192Y6E0	Salmonella_phage	3.2e-58	56.1
AYN90128.1\|2247082_2247274_-	DUF1482 family protein	NA	NA	NA	NA
AYN90129.1\|2247270_2247459_-	division inhibition protein DicB	NA	NA	NA	NA
AYN90130.1\|2247874_2248162_+	hypothetical protein	NA	NA	NA	NA
AYN92272.1\|2248130_2248496_-	hypothetical protein	NA	NA	NA	NA
AYN90131.1\|2248507_2248660_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.6e-07	53.2
AYN90132.1\|2248852_2249311_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.8e-24	46.2
AYN90133.1\|2249337_2249565_+	transcriptional regulator	NA	NA	NA	NA
AYN90134.1\|2249839_2250856_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN90135.1\|2251923_2252103_+	hypothetical protein	NA	NA	NA	NA
2249803:2251002	attR	NA	NA	NA	NA
AYN90136.1\|2252303_2252516_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
AYN90137.1\|2252791_2253715_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.8e-177	99.7

DBSCAN-SWA_5

2406007 : 2475277

Escherichia_phage(33.33%)

terminase,lysis,transposase,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN90260.1\|2406007_2407376_+\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-112	100.0
AYN90261.1\|2407476_2407626_+	protein HokB	NA	NA	NA	NA
AYN90262.1\|2407697_2407871_-	hypothetical protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
AYN90263.1\|2408115_2408646_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
AYN90264.1\|2408834_2408951_+	aldehyde dehydrogenase	NA	NA	NA	NA
AYN90265.1\|2409182_2409587_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AYN90266.1\|2409565_2409985_+	hypothetical protein	NA	NA	NA	NA
AYN90267.1\|2409875_2411315_-	lactaldehyde dehydrogenase	NA	NA	NA	NA
AYN90268.1\|2411511_2412312_-	YdcF family protein	NA	NA	NA	NA
AYN90269.1\|2412583_2416486_-	ATP-dependent helicase	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
AYN90270.1\|2416686_2417292_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
AYN92276.1\|2417345_2418638_-	hypothetical protein	NA	NA	NA	NA
AYN90271.1\|2418651_2420316_-	hydrolase	NA	NA	NA	NA
AYN90272.1\|2422855_2423716_-	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA
AYN90273.1\|2423947_2424538_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
AYN90274.1\|2424519_2425470_-	transcriptional regulator	NA	NA	NA	NA
AYN90275.1\|2425570_2426884_-	phenylacetate--CoA ligase	NA	NA	NA	NA
AYN90276.1\|2426910_2428116_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AYN90277.1\|2428115_2428538_-	acyl-CoA thioesterase	NA	NA	NA	NA
AYN90278.1\|2428527_2429955_-	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA
AYN90279.1\|2429956_2430745_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AYN90280.1\|2430744_2431512_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
AYN90281.1\|2431508_2432579_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
AYN90282.1\|2432586_2433084_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
AYN90283.1\|2433098_2433845_-	1,2-phenylacetyl-CoA epoxidase subunit C	NA	NA	NA	NA
AYN90284.1\|2433853_2434141_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
AYN90285.1\|2434152_2435082_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
AYN90286.1\|2435366_2437412_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
AYN90287.1\|2437659_2439933_+	primary-amine oxidase	NA	NA	NA	NA
AYN90288.1\|2439990_2441490_-	NAD-dependent phenylacetaldehyde dehydrogenase	NA	NA	NA	NA
AYN90289.1\|2441725_2442631_+	transcriptional activator FeaR	NA	NA	NA	NA
AYN90290.1\|2442802_2443129_-	DUF1318 domain-containing protein	NA	NA	NA	NA
AYN90291.1\|2443136_2443322_-	YnbE family lipoprotein	NA	NA	NA	NA
AYN90292.1\|2443318_2445958_-	YdbH family protein	NA	NA	NA	NA
AYN90293.1\|2446165_2447155_+	lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	1.5e-70	44.0
AYN90294.1\|2447265_2447688_+	heat-shock protein HslJ	NA	NA	NA	NA
AYN90295.1\|2447684_2447951_-	DUF333 domain-containing protein	NA	NA	NA	NA
AYN90296.1\|2448224_2451749_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AYN90297.1\|2452115_2453249_+	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
AYN90298.1\|2453389_2453824_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
AYN90299.1\|2454783_2455017_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
AYN90300.1\|2455333_2455864_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.2e-24	40.1
AYN90301.1\|2455883_2456240_-	HK97 gp10 family phage protein	A0A059VF88	Pseudomonas_phage	6.1e-11	39.2
AYN90302.1\|2456240_2456624_-	glutamate 5-kinase	A0A0P0I456	Acinetobacter_phage	3.7e-14	39.4
AYN90303.1\|2456623_2457019_-	protein singed	NA	NA	NA	NA
AYN90304.1\|2457241_2458381_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	7.4e-159	75.0
AYN90305.1\|2458479_2459244_-	hypothetical protein	G8C7P6	Escherichia_phage	6.9e-84	64.2
AYN90306.1\|2459348_2460461_-	hypothetical protein	I6PD76	Cronobacter_phage	4.2e-114	54.5
AYN90307.1\|2460444_2461851_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	4.0e-186	69.0
AYN90308.1\|2461853_2463155_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
AYN90309.1\|2463135_2464230_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	5.9e-113	80.5
AYN90310.1\|2464233_2464443_-	hypothetical protein	NA	NA	NA	NA
AYN90311.1\|2464420_2465353_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.4e-83	54.9
AYN90312.1\|2465345_2466137_-	transcriptional regulator	R4TG31	Halovirus	2.8e-48	40.2
AYN90313.1\|2466274_2467732_-	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
AYN90314.1\|2467928_2468114_-	hypothetical protein	K7PHU6	Enterobacteria_phage	3.6e-15	96.5
AYN90315.1\|2468330_2468828_-	lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.0
AYN90316.1\|2468827_2469043_-\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	1.3e-32	94.4
AYN90317.1\|2469094_2470323_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.7e-172	96.7
AYN92277.1\|2470630_2471005_-	tolA family protein	NA	NA	NA	NA
AYN90318.1\|2471138_2472155_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN90319.1\|2472375_2472804_-	cell envelope integrity protein TolA	NA	NA	NA	NA
AYN90320.1\|2473848_2474391_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.7e-76	75.7
AYN90321.1\|2474387_2474678_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.7e-46	87.5
AYN90322.1\|2474677_2475277_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.1e-105	92.0

DBSCAN-SWA_6

2480874 : 2499175

Escherichia_phage(55.56%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN90329.1\|2480874_2482878_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	3.4e-21	26.2
AYN90330.1\|2483212_2483635_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.8e-63	88.5
AYN90331.1\|2483675_2484746_-	phage replisome organizer	A0A088CD36	Shigella_phage	4.7e-62	64.6
AYN90332.1\|2484817_2485243_-	Rha family transcriptional regulator	NA	NA	NA	NA
AYN90333.1\|2485226_2485508_-	Cro/Cl family transcriptional regulator	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
AYN90334.1\|2485608_2486028_+	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
AYN90335.1\|2486237_2486417_+	hypothetical protein	NA	NA	NA	NA
AYN90336.1\|2486427_2486583_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	6.1e-08	55.3
AYN92278.1\|2486579_2487068_-	superinfection exclusion protein B	NA	NA	NA	NA
AYN90337.1\|2487508_2487730_+	cell division protein FtsZ	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
AYN92279.1\|2487729_2487900_+	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
AYN90338.1\|2487974_2488250_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
AYN90339.1\|2488351_2490952_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	3.9e-248	63.5
AYN90340.1\|2490944_2491754_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	6.8e-106	71.5
AYN90341.1\|2491810_2492005_+	restriction alleviation and modification enhancement protein	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
AYN90342.1\|2491997_2492207_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	6.1e-27	98.4
AYN90343.1\|2492285_2492501_+	hypothetical protein	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
AYN90344.1\|2492502_2493738_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	5.5e-240	98.8
AYN90345.1\|2493789_2494725_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
AYN90346.1\|2494853_2496227_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
AYN90347.1\|2496704_2497688_-	zinc transporter ZntB	NA	NA	NA	NA
AYN92280.1\|2497942_2499175_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-17	39.5

DBSCAN-SWA_7

3072089 : 3118182

Enterobacteria_phage(53.97%)

lysis,terminase,head,transposase,capsid,integrase,tail,portal

attL 3096010:3096025|attR 3119890:3119905

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN90855.1\|3072089_3073421_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.0e-21	37.6
AYN90856.1\|3073494_3074079_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.4e-105	95.9
AYN90857.1\|3074078_3077438_-\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
AYN90858.1\|3077502_3078102_-	Ail/Lom family protein	A0A0P0ZCF6	Stx2-converting_phage	8.2e-109	98.0
AYN90859.1\|3079088_3080301_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
AYN90860.1\|3080305_3082912_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	98.5
AYN90861.1\|3082971_3083643_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.2e-104	99.1
AYN90862.1\|3083540_3084284_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.8e-145	95.9
AYN90863.1\|3084288_3084987_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	7.3e-133	99.1
AYN90864.1\|3084986_3085316_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
AYN90865.1\|3085312_3087874_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	90.9
AYN90866.1\|3087866_3088301_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.5e-64	99.2
AYN90867.1\|3088282_3088705_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	5.7e-72	98.6
AYN92308.1\|3088720_3089461_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	4.9e-127	96.7
AYN90868.1\|3089468_3089864_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
AYN90869.1\|3089860_3090439_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	8.6e-79	97.9
AYN90870.1\|3090450_3090804_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	9.9e-62	99.1
AYN90871.1\|3090815_3091211_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.8e-46	81.1
AYN90872.1\|3091252_3092278_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.9e-190	98.8
AYN90873.1\|3092333_3092666_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.8e-52	95.5
AYN90874.1\|3092675_3093995_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.3e-234	98.9
AYN90875.1\|3093975_3095577_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	5.5e-309	99.1
AYN90876.1\|3095573_3095780_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AYN90877.1\|3095776_3097702_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
3096010:3096025	attL	NA	NA	NA	NA
AYN90878.1\|3097676_3098222_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	2.8e-95	100.0
AYN90879.1\|3098610_3098844_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
AYN90880.1\|3098901_3099312_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-55	77.8
AYN90881.1\|3099396_3099531_+	hypothetical protein	NA	NA	NA	NA
AYN90882.1\|3099612_3100137_-	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	4.5e-87	94.2
AYN90883.1\|3100339_3100492_-	hypothetical protein	Q716B2	Shigella_phage	2.1e-21	100.0
AYN90884.1\|3100479_3100947_-\|lysis	lysis protein	Q9AZ06	Salmonella_phage	7.7e-70	91.0
AYN90885.1\|3100943_3101477_-	lysozyme	K7PLY1	Enterobacteria_phage	5.3e-99	94.9
AYN90886.1\|3101582_3101855_+	hypothetical protein	NA	NA	NA	NA
AYN90887.1\|3101820_3102165_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	4.4e-38	96.4
AYN90888.1\|3102169_3102385_-\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	5.9e-33	95.8
AYN90889.1\|3102722_3103241_-	DUF1133 family protein	Q716B8	Shigella_phage	2.2e-94	98.8
AYN90890.1\|3103284_3103896_-	recombination protein NinG	Q716C3	Shigella_phage	1.1e-97	99.0
AYN90891.1\|3103895_3104165_-	hypothetical protein	K7PHK7	Enterobacteria_phage	7.1e-44	100.0
AYN90892.1\|3104157_3104328_-	protein ninF	K7PLU6	Enterobacteria_phage	2.5e-26	100.0
AYN90893.1\|3104324_3104507_-	NinE family protein	Q8H9Z6	Enterobacteria_phage	1.9e-29	100.0
AYN90894.1\|3104503_3105031_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	2.8e-100	99.4
AYN90895.1\|3105027_3105486_-	recombination protein NinB	A0A220NRM1	Escherichia_phage	7.3e-81	100.0
AYN90896.1\|3105541_3105832_-	protein ren	A0A1I9LJP5	Stx_converting_phage	5.9e-44	95.8
AYN90897.1\|3105828_3106530_-	Replication protein P	K7P6G2	Enterobacteria_phage	9.9e-130	100.0
AYN90898.1\|3106526_3107426_-	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	1.6e-172	99.3
AYN90899.1\|3107458_3107752_-	hypothetical protein	A2SY75	Escherichia_phage	3.7e-46	100.0
AYN90900.1\|3107870_3108056_-	hypothetical protein	A4KWT7	Enterobacteria_phage	1.6e-18	100.0
AYN90901.1\|3108045_3109062_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN90902.1\|3109370_3110084_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	5.4e-131	99.2
AYN90903.1\|3110202_3111108_+	hypothetical protein	A4KWU2	Enterobacteria_phage	3.0e-163	94.8
AYN90904.1\|3111540_3111864_+	antitermination protein	A4KWR8	Enterobacteria_phage	1.0e-52	99.1
AYN90905.1\|3111864_3112347_-	superinfection exclusion protein B	A4KWR7	Enterobacteria_phage	1.1e-87	100.0
AYN90906.1\|3112613_3112814_+	restriction endonuclease	A0A088CQ62	Enterobacteria_phage	1.2e-32	98.5
AYN90907.1\|3112996_3113365_+	DUF2528 family protein	K7PGR6	Enterobacteria_phage	7.6e-65	98.4
AYN90908.1\|3113444_3113714_+	host cell division inhibitory peptide Kil	G3CFI2	Escherichia_phage	1.3e-42	100.0
AYN90909.1\|3113668_3114085_+	Host-nuclease inhibitor protein gam	C6ZCV5	Enterobacteria_phage	2.8e-71	97.1
AYN90910.1\|3114090_3114876_+	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
AYN90911.1\|3114872_3115553_+	exonuclease	A0A0P0ZCD4	Stx2-converting_phage	7.9e-132	99.1
AYN92309.1\|3115549_3115732_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	4.3e-29	100.0
AYN90912.1\|3115704_3115896_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AYN90913.1\|3115906_3116188_+	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	1.2e-46	97.8
AYN90914.1\|3116286_3116505_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.2e-33	94.4
AYN90915.1\|3116551_3116830_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
AYN92310.1\|3116915_3117134_+	excisionase	Q77WA4	Escherichia_phage	1.1e-34	97.2
AYN90916.1\|3117111_3118182_+\|integrase	integrase	K7P6P6	Enterobacteria_phage	4.3e-201	99.4
3119890:3119905	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3308399 : 3372704

Escherichia_phage(30.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN91082.1\|3308399_3309416_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN91083.1\|3310007_3313889_-	enterobactin synthase component F	A0A2K9KZV5	Tupanvirus	1.6e-59	29.0
AYN91084.1\|3313885_3314104_-	enterobactin biosynthesis protein YbdZ	NA	NA	NA	NA
AYN91085.1\|3314106_3315309_-	enterochelin esterase	NA	NA	NA	NA
AYN91086.1\|3315551_3317792_+	siderophore enterobactin receptor FepA	NA	NA	NA	NA
AYN92315.1\|3317966_3318587_+	enterobactin synthase subunit EntD	NA	NA	NA	NA
AYN91087.1\|3318868_3319981_-\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
AYN91088.1\|3320057_3320210_-	protein HokE	NA	NA	NA	NA
AYN91089.1\|3320307_3321677_-\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-112	100.0
AYN91090.1\|3321947_3322097_-	hypothetical protein	NA	NA	NA	NA
AYN91091.1\|3322108_3323227_+	glutamate--cysteine ligase	NA	NA	NA	NA
AYN91092.1\|3323292_3323541_+	DUF1158 domain-containing protein	NA	NA	NA	NA
AYN91093.1\|3323605_3323974_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
AYN91094.1\|3324067_3324721_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
AYN91095.1\|3324828_3326076_+	miniconductance mechanosensitive channel YbdG	NA	NA	NA	NA
AYN91096.1\|3326143_3327520_-	phenylalanine transporter	NA	NA	NA	NA
AYN91097.1\|3327621_3330765_-	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	S5VTK5	Leptospira_phage	1.1e-58	22.0
AYN91098.1\|3330776_3332000_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA
AYN91099.1\|3332015_3332327_-	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone	NA	NA	NA	NA
AYN91100.1\|3332363_3333287_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	3.8e-177	99.7
AYN91101.1\|3333571_3334945_-	cation efflux system protein CusC	NA	NA	NA	NA
AYN91102.1\|3335101_3335785_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	7.9e-31	35.6
AYN91103.1\|3335774_3337223_+	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	NA	NA	NA
AYN91104.1\|3337959_3339861_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.3e-27	25.7
AYN91105.1\|3339888_3340350_+	DUF1795 domain-containing protein	NA	NA	NA	NA
AYN91106.1\|3343918_3345055_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AYN91107.1\|3345325_3347563_+	phage adsorption protein NrfB	NA	NA	NA	NA
AYN91108.1\|3347549_3350522_+	phage receptor	NA	NA	NA	NA
AYN91109.1\|3350522_3351413_+	DUF4434 family protein	NA	NA	NA	NA
AYN91110.1\|3351595_3352357_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AYN91111.1\|3352721_3353354_+	DNA-binding response regulator	NA	NA	NA	NA
AYN91112.1\|3353356_3353872_-	fimbriae assembly protein	NA	NA	NA	NA
AYN91113.1\|3353882_3354923_-	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
AYN91114.1\|3358318_3359011_-	fimbrial chaperone SfmC	NA	NA	NA	NA
AYN91115.1\|3359230_3359773_-	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
AYN91116.1\|3360243_3361110_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
AYN91117.1\|3361111_3361324_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
AYN91118.1\|3361431_3361953_+	metal-dependent hydrolase	NA	NA	NA	NA
AYN91119.1\|3361988_3363374_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
AYN91120.1\|3363547_3364042_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AYN91121.1\|3364044_3364767_+	UDP-2,3-diacylglucosamine hydrolase	NA	NA	NA	NA
AYN91122.1\|3364884_3365394_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
AYN91123.1\|3365390_3366458_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AYN91124.1\|3366652_3367546_-	carbamate kinase	NA	NA	NA	NA
AYN91125.1\|3367542_3368358_-	DUF2877 domain-containing protein	NA	NA	NA	NA
AYN91126.1\|3368368_3369628_-	DUF1116 domain-containing protein	NA	NA	NA	NA
AYN91127.1\|3369637_3371305_-	acyl-CoA synthetase FdrA	NA	NA	NA	NA
AYN91128.1\|3371687_3372704_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0

DBSCAN-SWA_9

3618401 : 3669890

Enterobacteria_phage(18.75%)

plate,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN91340.1\|3618401_3620507_-	injection protein	A0A2I7QQN9	Vibrio_phage	2.0e-88	36.2
AYN91341.1\|3620506_3621973_-	acyltransferase	B6SCW4	Bacteriophage	5.7e-111	52.0
AYN91342.1\|3622417_3622669_-	hypothetical protein	NA	NA	NA	NA
AYN91343.1\|3622735_3625492_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.0e-299	57.2
AYN91344.1\|3625504_3626107_-	hypothetical protein	Q8W653	Enterobacteria_phage	5.3e-23	34.7
AYN91345.1\|3626099_3626321_-	hypothetical protein	NA	NA	NA	NA
AYN91346.1\|3626317_3626581_-\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
AYN91347.1\|3626577_3626772_-	hypothetical protein	NA	NA	NA	NA
AYN91348.1\|3626764_3627832_-	ash family protein	A0A1C9IHV9	Salmonella_phage	8.9e-13	36.8
AYN91349.1\|3627825_3628008_-	DUF4222 domain-containing protein	NA	NA	NA	NA
AYN91350.1\|3628000_3628834_-	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
AYN91351.1\|3628846_3629278_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	5.1e-28	49.7
AYN91352.1\|3629277_3629481_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	4.7e-08	50.9
AYN91353.1\|3630132_3631347_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	5.7e-133	56.7
AYN91354.1\|3631702_3632956_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
AYN91355.1\|3632967_3634071_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AYN91356.1\|3634358_3635414_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	5.0e-117	60.6
AYN91357.1\|3635452_3635854_-	sigma factor-binding protein Crl	NA	NA	NA	NA
AYN91358.1\|3635911_3637156_-	esterase	NA	NA	NA	NA
AYN91359.1\|3637247_3637706_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AYN91360.1\|3637966_3639424_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
AYN91361.1\|3639480_3640017_-	peptide chain release factor H	NA	NA	NA	NA
AYN91362.1\|3639949_3640216_-	hypothetical protein	NA	NA	NA	NA
AYN91363.1\|3640449_3640902_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYN91364.1\|3640911_3641310_-	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA
AYN91365.1\|3641312_3641606_-	antitoxin YafN	NA	NA	NA	NA
AYN91366.1\|3641657_3642713_-	DNA polymerase IV	NA	NA	NA	NA
AYN92325.1\|3642783_3643554_-	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
AYN91367.1\|3643513_3645253_+	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
AYN91368.1\|3645476_3645974_-\|transposase	transposase	NA	NA	NA	NA
AYN91369.1\|3646149_3646899_-	peptidoglycan endopeptidase	A0A1V0DZX6	Clostridioides_phage	9.0e-20	38.5
AYN91370.1\|3647108_3647369_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
AYN91371.1\|3647371_3647650_+	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
AYN91372.1\|3647805_3648546_+	transpeptidase	NA	NA	NA	NA
AYN91373.1\|3648516_3649284_-	class II glutamine amidotransferase	NA	NA	NA	NA
AYN91374.1\|3649489_3650068_-	phosphoheptose isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
AYN91375.1\|3650307_3652752_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AYN91376.1\|3652794_3653268_-	inhibitor of vertebrate lysozyme	NA	NA	NA	NA
AYN91377.1\|3653421_3654192_+	hydrolase YafV	NA	NA	NA	NA
AYN91378.1\|3655270_3656287_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
AYN91379.1\|3660719_3662861_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-25	25.0
AYN91380.1\|3662900_3663038_-	hypothetical protein	NA	NA	NA	NA
AYN91381.1\|3663070_3663589_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYN91382.1\|3664284_3664785_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYN91383.1\|3664819_3665044_+	hypothetical protein	NA	NA	NA	NA
AYN91384.1\|3665094_3666570_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYN91385.1\|3666576_3666990_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYN91386.1\|3666993_3668844_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYN91387.1\|3668807_3669890_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033094

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP033094_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033094_1

99262-99419

Orphan

Consensus_repeat	Method
CCGTACCCGGTATAGTGGAT	PILER-CR

2 spacers

The CRISPR arrays of CP033094_1

>merge|CP033094|1|99262-99419|PILER-CR
CCGTACCCGGTATAGTGGATGAGAACTACTGCTAATCGGTTACCGGGAATGTGGTGGTACTGGGTGGAAAGGTTTACCCGGTATAGTGGATCGTGGCAGTGTCATCTTTCCGGATAGCATGACGTCACGGTTAGGAAACCGTACCCGGTATAGTGGAT

>CP033094|1|1|99262-99419|PILER-CR
CCGTACCCGGTATAGTGGAT	GAGAACTACTGCTAATCGGTTACCGGGAATGTGGTGGTACTGGGTGGAAAG
GTTTACCCGGTATAGTGGAT	CGTGGCAGTGTCATCTTTCCGGATAGCATGACGTCACGGTTAGGAAA
CCGTACCCGGTATAGTGGAT

Protein	Signature genes	Signature genes Name	Protein_function
CP033094.1\|AYN87886.1\|91335_91677_+\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87891.1\|93512_95897_-\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372704
CP033094.1\|AYN87901.1\|107324_108149_+\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|273146
CP033094.1\|AYN87898.1\|103676_103853_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87897.1\|100774_103231_-\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372704
CP033094.1\|AYN87888.1\|92092_92272_+\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87895.1\|98141_99023_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|374546
CP033094.1\|AYN87889.1\|92268_92973_+\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87892.1\|96147_96750_+\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372706
CP033094.1\|AYN87903.1\|109267_109975_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199908
CP033094.1\|AYN87899.1\|103867_105622_-\|DUF4942-domain-containing-protein	unknown	unknown	gnl\|CDD\|372683
CP033094.1\|AYN87887.1\|91681_92041_+\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87904.1\|109971_110172_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87900.1\|105807_106965_-\|DNA-binding-protein	unknown	unknown	unknown
CP033094.1\|AYN87902.1\|108163_108985_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87896.1\|100120_100324_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87894.1\|97153_97750_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372704
CP033094.1\|AYN87890.1\|93005_93425_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN88030.1\|99608_100106_-\|hypothetical-protein	unknown	unknown	unknown
CP033094.1\|AYN87893.1\|96761_96998_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371986

Protein	Function_ID	Function_description	E-value
CP033094.1\|AYN87891.1\|93512_95897_-\|DUF4165-domain-containing-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	2.26735e-68
CP033094.1\|AYN87901.1\|107324_108149_+\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	7.14985e-68
CP033094.1\|AYN87893.1\|96761_96998_+\|hypothetical-protein	gnl\|CDD\|371986	pfam12245, Big_3_2, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	4.38686e-09
CP033094.1\|AYN87897.1\|100774_103231_-\|DUF4165-domain-containing-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	9.32876e-65
CP033094.1\|AYN87895.1\|98141_99023_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|374546	pfam16441, DUF5038, Domain of unknown function (DUF5038). This family consists of several uncharacterized proteins around 200 residues in length and is mainly found in various Clostridiales species. The function of this family is unknown.	0.000541832
CP033094.1\|AYN87894.1\|97153_97750_+\|hypothetical-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	8.99979e-44
CP033094.1\|AYN87892.1\|96147_96750_+\|DUF4165-domain-containing-protein	gnl\|CDD\|372706	pfam13752, DUF4165, Domain of unknown function (DUF4165).	3.66424e-39
CP033094.1\|AYN87903.1\|109267_109975_-\|hypothetical-protein	gnl\|CDD\|199908	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40. Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.	0.000379412
CP033094.1\|AYN87899.1\|103867_105622_-\|DUF4942-domain-containing-protein	gnl\|CDD\|372683	pfam13708, DUF4942, Domain of unknown function (DUF4942). The function of this family is not known.	2.90653e-16

>CP033094.1|AYN87895.1|98141_99023_+|RepB-family-plasmid-replication-initiator-protein
MSSNNNKLSLVIEESLKDSGEVIQLFPTLKQTIQPKVLLRLGVFVPTLKSTDKGGRKSHHIDATEPLSRLSIVEGEGYSQIQIYGPRLDMDTDFKSWCGIVYALSNRPLDSEGQLELNFPEFAKFCGFDTKRIDKQLKERFDASLTRIARTNISFIKKIPGTDDQITINMHLVESTYYDSSTGKIIIKPNSKLNTLYRVDGKTRLYLKTLQKLARKESAQALYLYLAELPSTFYRIGFDRLRGRLQLSSHLGNQNATVKKALGQLKEIGFLEYSIDKENGDYVLNILKRNMKP
>CP033094.1|AYN87894.1|97153_97750_+|hypothetical-protein
MVYGLENIRIALADNLTTPRITRLQITGGPTADNVELTWSPAGTNVYAPEYPRLFPSFEPSENYALSVTVSDSQSNSKTYTQKFSYLPNNLVQLHNLRTLSVSSALKTSLNEPLAYLSTNVLRKSNGEIAKDVQSATLTVRKDAAFGIKFNGVQAALGESVEMKIDMGLGDNLLVPIYPAENGKVGTSEFMIQIDELK
>CP033094.1|AYN87893.1|96761_96998_+|hypothetical-protein
MYHTYSKNSVKGAGIPDSNLDEDFTAKVVIYDNAGNTRTLPLQLFRYDNYLGGPRSAKLRQRGARGFRISGLFSWDDR
>CP033094.1|AYN87892.1|96147_96750_+|DUF4165-domain-containing-protein
MKNQAIALAMAMLGVSVPASAQIYESIFTDTNGIEVHAPSTRLLLNPASPVTLTLIAGLDRYVNVKITSATGTQLLNTTTTRTSVSDRLKAGDGSEFYGKKVTLPVLGEGRSVVQVSILDLNQSVVATYSYNWLVDTTPLSVNALTGNAAYGSTAGSVWKMGLEATGQFDFTSTNVTDVNGIEKGMFYVYRSNGSLFSTT
>CP033094.1|AYN87891.1|93512_95897_-|DUF4165-domain-containing-protein
MKFCRRPLIVAVYTALLFPLYSQAQLYNYSYTDTRGTKVNAEPTREYLNPGSAITLNLISGLDRYERVTVTRSSDNVQMFQSVTGLVTVADRITAADGSEYYGKSMTLPVLGEGTFSLKSETLDNKSNVVATTSYSFSIDITPPVLPDPMQWIRAGFQYGSLDIFGDRTATQAISLSNVSDARSGLDKAEWFAIDSSGVRRTVNAQLNALTGVVQALAAVAAGSTVAPVSPAYYTVGFRVYDKAGNWTETSHRSGIDRTIPSYIQHQVRNAKTGVWEDYVPGMTIFENPVKFRYKRLKSDSTNFNGTDFGWVDQITNSDNTYFYTEATVSYPETYMYYELHTKAGLNVNLQYKTLKFTPGNGVAEAPRYLSGQYHFRDANTWTSSDIVRFTGPDCVDLGRVNVEPRSYVQTATIVGIGSCNVSVGESSCQVSMNYCKTSGKGYVPYQIHIRGTGSYANLGGLQSHFYTYWDMNAPVINSIVSSPLDKTVVMLVTDSDVTNDWTNYMWATNIFNLTLKDTSNKVSTLSPKNVTVLNYQLKQVTFDYSALPSGKYTATGAATDTYNNTAELTLSNTILHDVTPPVVDISFEGKQADGALVKGLENLVITLADDMTKASLKSITLSGGPTSDKVSVGWYSQGTDKYGLNYPRIFPATDDADSYQLTAVAVDEAGNTTTKVSRFRYVPNNLIEFNTLKTLAVGMGLKTSDNQPLAYLRTNSIRKKDGSLITGAQTGTLTVRKDAAFAVSMNGVAVVPGDSKDITIDFGQGDGVLIPIFPATSGNVGESSFMIELPQIQ
>CP033094.1|AYN87890.1|93005_93425_-|hypothetical-protein
MSELAEKPLITRVAPLERIYYCASRAEGLKPDRHEIRMQSQFLLLGVIWLPPALAMAELERLLKGYDADHSRLLENVLETAHQQFLKFCEPQKREGGGVENHVECPRQDDALQCLRFMSTRYALAVDLCAAYVCSRYGR
>CP033094.1|AYN87889.1|92268_92973_+|hypothetical-protein
MTMKNTVIPTVTENEMGEVITRHSAYGLVSVSRTSTTGQRLYASDLSHKEVVTMTFSESEQIERDGVIRHRLAEGRRRSPLLQVSLSPAQWATMITSFGMSDGVPCTINSLIRGDYERQPEIGYIESTRERYERQIREAAEREMAKLHEKLEVLRLLAVKGKAGKRELDEAYQSLLSVINNLPVNLAFTNQLIQESMVNIVSHGKAELEATAMGVAARLGMKEMSSLASLEEKK
>CP033094.1|AYN87888.1|92092_92272_+|hypothetical-protein
MKGKNIVARVVREAAYKWETRHQLQQAYNSASDVGKVPRHSGSASDLRQTLSFLILCRA
>CP033094.1|AYN87887.1|91681_92041_+|hypothetical-protein
MLHERRQVFRTTGGGTVRVQPSPHNNSTEYIIMTNANANDGKTSPVLPTLEQVYALLKANYKPARFADRDGEIWGHEYSWNLARSSLQDLEKYGKSYVSKHSDRMGDGFSFGPDLVIIR
>CP033094.1|AYN87886.1|91335_91677_+|hypothetical-protein
MRELLGMAGAEHQASVMYQTFGHLDAKLGEKHKGHFVFINGQHGDLCVVHSEFSSFDEGPGYFSDRADFIWELVKNDGPCSKVGIYRFDGEYALPKRRNGRRFSGSVTCLQAF
>CP033094.1|AYN88030.1|99608_100106_-|hypothetical-protein
MMKSNAPLIILICLMIAFSAYVKSWSLLYTLLAASVSLTVMISLPFIVSPLQHSKFIALRILRLLVITLWTIGLVGVFFSVVERLVWVNADSYPAWLAKELDSPAITDGENFIKATESFEKICGKNKGYLSVVTKHNGIFMRCDDSLSFDSWWKGVYRLKTPETR
>CP033094.1|AYN87896.1|100120_100324_-|hypothetical-protein
MIHFAEREARERKAHASSGPIVTLSSVIEAFFGIRFTPVQNDGNFSKAADDYKRSLSKLVQNGAPKE
>CP033094.1|AYN87897.1|100774_103231_-|DUF4165-domain-containing-protein
MRKILTGCIIATAIASVYPAAAQIFSYSYTDTNQLAKTLKPATQSYLNPASTMTLNLISGLDRYERVSVTRDSDKKVMYSAVTGKISVADRIVAADGTEYYGKDLALPALGEGAFTVINDTLDLQQAVVSSSTYHFTIDTTAPKYTSIYPSQNAGYEMVLSGPVWGLGRGGSGQFSIFADGVDDANGIDKIRLVIKRGNGTVVSDNTLSYDTAAKRAFYPWIKDSVTQPGMPTSDLNEEFTFNFIITDKAGNTLNIPPQRFLFDDQIGEYTPFAVHDSRVSTSVVPGISSGYVPFVRGLSVLENPYRMVIRIPRTNWKPYRNGGITILNNYGGAKVISEDTTYVYVEVKLPQGALDINYYRPVNTYQWSGGDLTQYASWLNWDPASVKSPAWGSPAIERQMSDGTWFNSVNWKYFKASDMPVNLTQIRFNVQARPYDQKITGGATCNIPAGSTSCTVALTQAITNGTTGYLHSGYEVRSTTESTFFMPIWENVVWHTLGPSVTGYDYNDTTNILQVYINQPGDGSYFDTVKLSRVWLSDKSRNNADINVTGTLTGRNTATGNYTYEFNLKLIPEGSYNVQLNAQDSFNNTGSLDYKTVTVDNTPPSISISYETKPITSSVTVYGLENIRIQLADTLTKPSLTRMTLRGGPVSDAVELSWVNLGNNLYAPNYPKIFPSLNDGETYTLTVQAKDEMNNVKESAVEFSYLPNNLVRLENLKTISVSTALKTSDDTPLAVLYASQLRKKDGSIATGKQDAILTVRKDAAFGVTVNGVSAAPGESKNVQLDLGLGDSRSFPIFPSTSGVVGTSEFMLNIEELK
>CP033094.1|AYN87898.1|103676_103853_-|hypothetical-protein
MSKSSPVLPEDRDDIEFVMDDFQRSLGKSKPVREVQFLGESQQSEESANSADSPWFES
>CP033094.1|AYN87899.1|103867_105622_-|DUF4942-domain-containing-protein
MSANLLAFCSRLLSWYQINPSKRTGAMSAVESDSLPMGAPGSSLVAYMPHTGLLINDDNFLPEMREELDVINRQVESYNDELSLLRSMSAQFLKCGNQKLYSYLSGYNHLISEADASYAENALRSEYWKRVMALTDVLSVMSDEKKKEWDKQFTADRYHLPPQEIPDFTLDAVVTTVVALLNDRHQFIKDRVYAVFQSLSRQHKTNKAFGFSTRMITSGVCEGVKDKWVKLKVEFKESGLMPLSELRVICSYFRGETVKPVYDTKKMVENMVGHVGFRNWISLDGNSIRFRVYKNGSMHIDVHPDIAERLNNILAAIVPLALPAERVAHTKATLQEFPALKRCIDFHSRMQLAELDFTQNEKEWSSWTSLGYAGENADKTRQVNADVLRFLGARVTSYHVTFDYDPTEVMRFIGHMGAMPDIKSHQFYPSSARLSEYVASIIAAGEGERLLEPNIGHGDLLQCFPKSVNVTGIELDTLNCLVSRAKGYETTEADFLAWSAANQIQKFDCVVMNPPFADNRAKLHLLAAASHLVPGGRLAAVLPLSLQGIDNLLGEGFRTEWMDTFDNEFDNTAVSVRVLYAERF
>CP033094.1|AYN87900.1|105807_106965_-|DNA-binding-protein
MSDLMTDSQQQTNSRVFKSPLVSFSTVTGSGRFVSGMKQFRDANPDLCNEVTEQKAWAISPTVVQITEGFNSREMGMGEAYYQLPEVADHLNNIKNAYIRGDYVDPIRVLIKDGIPYVRQGHCRLKAALMAVAEGHSNLTILCIEMKADEISCELTTIDGNRGLALSPVALGESYRRLQALGGWSLDRIAEREGKSNTTIAALIRLTGCCVYLKKLIHADAISYVAVLSLIDEFGETEAVARIEKMIADLEKADSSGIQIKKTPRGQIRVVPSDFKPARVPPVLATKAVEGVKLITTSLLQKLGDIELPEVTDSSEDEEITFTLNRSMLEMLKNLQSEITESENKQLRRAENRQARLKGEKVTYKTKKNDKNGGEPQSETPPAQA
>CP033094.1|AYN87901.1|107324_108149_+|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase
MRKHTPIIKWAGGKTKLMPFLSKHFPHDKSRRWVEPFIGGGAVFLNMFATEALLADSNPDLINLYRNIQRNKPAFIREVQLLAERHFEEEDYYVLRNTFNSTSFDDAPLQRAAIFYAMNRLGYNGLCRYNLKRKFSVPWGKRYQFSLDIQKVDYLSFRLSSVELKTADFGQTLEFAGGGDQIYCDPPYDKISKTSFVSYDGIPFDKSAHVKLADMLVDANRKGASVAISNSMTPFTLELYEERGFDIHTHNAYRSVGSQSKSRKKEIEILAVLR
>CP033094.1|AYN87902.1|108163_108985_-|hypothetical-protein
MQNDLGLGFIRKSARTSAKIISRKVTFPLDDLDNAKLTLTGLQCHPSCRFPFYQLSMLIHNQLAEHGVISADENAPFTVSISIHEWLSRARVAFIDYHGLRNSDKTVMITRAHLEELLTYLSTTLAVYVPYSKKRLNFSFLTSFTLVKTSQSYTLTFPGVLRPFLMLLGGLIQEFMTEKLLKRRNAQFVIFDYLRKSRRHSHKITDIVNDLQLHTVNVRIMNVLTQLADQGFISFICEGKRGERSIEELQFIPYASRDHSEVLSFEEWISPID
>CP033094.1|AYN87903.1|109267_109975_-|hypothetical-protein
MKHSLFFTQDGYLLPSSVKPIYGKDGHYYAVITRECFECGGTGKIANAVCVTCNGSKTSPATEEKLVLKECIEFLETIPELRCNPDLEAWKRRHSEQLALLQADNSKFAASIAQQLNNNLFLTVRQLESFYSTYQPVSEAFSENAGFPIEHSFNIGDVVSFDIIFTEVRAAFSKGSHSYFFTFTGKKQNDGFALTGNVQDHVLLGHSYHLSGKVRKIHYFDSVPYALLTVFKLTA
>CP033094.1|AYN87904.1|109971_110172_-|hypothetical-protein
MDKITQFTVINTYNDLLITKGTLDRNIEDIKAGKRFDHFEEGHDQYVQKVTDALQLVEARLENLKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	81476-81526	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	182983-183033	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	180762-180812	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	96276-96326	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	235796-235846	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	42635-42685	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	152742-152792	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	142863-142913	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	133710-133760	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	117174-117224	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	192529-192579	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	11544-11594	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MN232190	Escherichia coli plasmid pGD27-31, complete sequence	77135-77185	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	247816-247866	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	175824-175874	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	29608-29658	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	195030-195080	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	160405-160455	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	229056-229106	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	1240-1290	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	150895-150945	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	222888-222938	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	157698-157748	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	163625-163675	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	139403-139453	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	103197-103247	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_002305	Salmonella typhi plasmid R27, complete sequence	54047-54097	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	156262-156312	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	114948-114998	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	99282-99332	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	190141-190191	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	186842-186892	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	163174-163224	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	95412-95462	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	154888-154938	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	135342-135392	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	101555-101605	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	111577-111627	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	163625-163675	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	192086-192136	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	157699-157749	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	237889-237939	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	79517-79567	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	27631-27681	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	106159-106209	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	267735-267785	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	173816-173866	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	95376-95426	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	230101-230151	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	20571-20621	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	1141-1191	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	259337-259387	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	210872-210922	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	110178-110228	1.0
CP033094_1	1.1\|99282\|51\|CP033094\|PILER-CR	99282-99332	51	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	111658-111708	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	42568-42614	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	152675-152721	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	142796-142842	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	133643-133689	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	117107-117153	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	192462-192508	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	11477-11523	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	150828-150874	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	163558-163604	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	139336-139382	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	103130-103176	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_002305	Salmonella typhi plasmid R27, complete sequence	53980-54026	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	190074-190120	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	154821-154867	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	135275-135321	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	101488-101534	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	163558-163604	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	79450-79496	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	230034-230080	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	110111-110157	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	81547-81593	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	183054-183100	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	180833-180879	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	96347-96393	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	235867-235913	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MN232190	Escherichia coli plasmid pGD27-31, complete sequence	77206-77252	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	247887-247933	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	175895-175941	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	29679-29725	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	195101-195147	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	160476-160522	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	229127-229173	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	1311-1357	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	222959-223005	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	157769-157815	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	156333-156379	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	115019-115065	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	99353-99399	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	186913-186959	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	163245-163291	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	95483-95529	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	111648-111694	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	192157-192203	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	157770-157816	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	237960-238006	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	27702-27748	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	106230-106276	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	267806-267852	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	173887-173933	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	95447-95493	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	20642-20688	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	1212-1258	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	259408-259454	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	210943-210989	1.0
CP033094_1	1.2\|99353\|47\|CP033094\|PILER-CR	99353-99399	47	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	111729-111775	1.0

1. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

2. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

3. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

4. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

5. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

6. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

7. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

8. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

9. spacer 1.1|99282|51|CP033094|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

10. spacer 1.1|99282|51|CP033094|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

11. spacer 1.1|99282|51|CP033094|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

12. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

13. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

14. spacer 1.1|99282|51|CP033094|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

15. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

16. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

17. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

18. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

19. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

20. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

21. spacer 1.1|99282|51|CP033094|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

22. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

23. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

24. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

25. spacer 1.1|99282|51|CP033094|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

26. spacer 1.1|99282|51|CP033094|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

27. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

28. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

29. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

30. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

31. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

32. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

33. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

34. spacer 1.1|99282|51|CP033094|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

35. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

36. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

37. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

38. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

39. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

40. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

41. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

42. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

43. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

44. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

45. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

46. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

47. spacer 1.1|99282|51|CP033094|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

48. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

49. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

50. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

51. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

52. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

53. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

54. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

55. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

56. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

57. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

58. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

59. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

60. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

61. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

62. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

63. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

64. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

65. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

66. spacer 1.1|99282|51|CP033094|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

67. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

68. spacer 1.1|99282|51|CP033094|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

69. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

70. spacer 1.1|99282|51|CP033094|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

71. spacer 1.1|99282|51|CP033094|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

72. spacer 1.1|99282|51|CP033094|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

73. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

74. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

75. spacer 1.2|99353|47|CP033094|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

76. spacer 1.2|99353|47|CP033094|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

77. spacer 1.2|99353|47|CP033094|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

78. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

79. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

80. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

81. spacer 1.2|99353|47|CP033094|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

82. spacer 1.2|99353|47|CP033094|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

83. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

84. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

85. spacer 1.2|99353|47|CP033094|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

86. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

87. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

88. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

89. spacer 1.2|99353|47|CP033094|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

90. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

91. spacer 1.2|99353|47|CP033094|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

92. spacer 1.2|99353|47|CP033094|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

93. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

94. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

95. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

96. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

97. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

98. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

99. spacer 1.2|99353|47|CP033094|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

100. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

101. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

102. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

103. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

104. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

105. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

106. spacer 1.2|99353|47|CP033094|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

107. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

108. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

109. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

110. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

111. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

112. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

113. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

114. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

115. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

116. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

117. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

118. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

119. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

120. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

121. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

122. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

123. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

124. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

125. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

126. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

127. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

128. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

129. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

130. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

131. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

132. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

133. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

134. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

135. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

136. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

137. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

138. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

139. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

140. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

141. spacer 1.2|99353|47|CP033094|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

142. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

143. spacer 1.2|99353|47|CP033094|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

144. spacer 1.2|99353|47|CP033094|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

41426 : 71761

Escherichia_phage(30.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN87844.1\|41426_42830_-\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
AYN87845.1\|43234_44008_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYN87846.1\|44178_45582_-	glucuronate isomerase	NA	NA	NA	NA
AYN87847.1\|45584_47066_-	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	3.2e-45	31.6
AYN87848.1\|47151_48336_-	mannonate dehydratase	NA	NA	NA	NA
AYN88026.1\|48714_49995_+	MFS transporter	NA	NA	NA	NA
AYN87849.1\|50906_51710_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AYN87850.1\|51709_52546_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AYN87851.1\|52625_53357_+	RepB family plasmid replication initiator protein	I3WF20	Macacine_betaherpesvirus	8.7e-20	28.9
AYN88027.1\|53666_53978_+	hypothetical protein	NA	NA	NA	NA
AYN87852.1\|54224_55781_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.3e-102	42.1
AYN87853.1\|55777_57097_+	restriction endonuclease subunit S	A0A240FAT6	Liberibacter_phage	1.9e-41	50.6
AYN87854.1\|59192_59897_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN87855.1\|60219_61752_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AYN87856.1\|62280_62730_-	hypothetical protein	NA	NA	NA	NA
AYN87857.1\|63251_63362_-	hypothetical protein	E4ZFP9	Streptococcus_phage	1.9e-08	88.6
AYN87858.1\|63366_64104_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	6.3e-135	99.6
AYN87859.1\|64229_64325_-	23S rRNA methyltransferase attenuator leader peptide ErmL	NA	NA	NA	NA
AYN87860.1\|64459_65164_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN87861.1\|65285_66191_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AYN87862.1\|66187_67426_+	MFS transporter	NA	NA	NA	NA
AYN87863.1\|67509_68214_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN87864.1\|68159_68351_-	hypothetical protein	NA	NA	NA	NA
AYN87865.1\|68473_68782_-	monooxygenase	NA	NA	NA	NA
AYN87866.1\|68881_69784_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYN87867.1\|70548_71761_+\|transposase	IS3-like element IS629 family transposase	Q6H9S3	Enterobacteria_phage	2.5e-168	99.3

DBSCAN-SWA_2

188542 : 227697

Escherichia_phage(25.0%)

transposase,integrase

attL 185107:185119|attR 227861:227873

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
185107:185119	attL	NA	NA	NA	NA
AYN87977.1\|188542_189466_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	7.1e-176	98.7
AYN87978.1\|189637_189865_+	hypothetical protein	NA	NA	NA	NA
AYN87979.1\|189974_190781_+	HNH endonuclease	G0X580	Salmonella_phage	1.3e-13	37.9
AYN87980.1\|190886_191306_+	hypothetical protein	NA	NA	NA	NA
AYN87981.1\|191613_192063_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	4.9e-05	34.3
AYN87982.1\|192132_192315_+	hypothetical protein	NA	NA	NA	NA
AYN87983.1\|192828_193233_-	DNA-binding protein	NA	NA	NA	NA
AYN87984.1\|193494_193767_-	hypothetical protein	NA	NA	NA	NA
AYN87985.1\|193763_194432_-	hypothetical protein	NA	NA	NA	NA
AYN88033.1\|194938_195394_+	DUF4942 domain-containing protein	NA	NA	NA	NA
AYN87986.1\|195562_195751_+	hypothetical protein	NA	NA	NA	NA
AYN87987.1\|195753_196974_+	hypothetical protein	NA	NA	NA	NA
AYN87988.1\|197028_197232_-	hypothetical protein	NA	NA	NA	NA
AYN87989.1\|197269_198565_-	DUF1173 family protein	NA	NA	NA	NA
AYN87990.1\|198589_198760_-	hypothetical protein	NA	NA	NA	NA
AYN87991.1\|198888_200316_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-101	55.3
AYN87992.1\|200539_201055_+	thermonuclease family protein	V5UN65	Mycobacterium_phage	7.1e-08	28.3
AYN87993.1\|201051_201984_+	hypothetical protein	NA	NA	NA	NA
AYN87994.1\|202039_202819_+	DNA repair protein	NA	NA	NA	NA
AYN87995.1\|203929_204160_+	hypothetical protein	NA	NA	NA	NA
AYN87996.1\|204223_204523_+	hypothetical protein	NA	NA	NA	NA
AYN87997.1\|204772_205228_-	hypothetical protein	NA	NA	NA	NA
AYN87998.1\|207398_207833_-	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AYN87999.1\|207904_208255_+	mercuric ion transporter MerT	NA	NA	NA	NA
AYN88000.1\|208268_208544_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AYN88034.1\|208579_209002_+	mercury transporter MerC	NA	NA	NA	NA
AYN88001.1\|209053_210748_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AYN88002.1\|210765_211128_+	transcriptional regulator	NA	NA	NA	NA
AYN88003.1\|211124_211361_+	mercury resistance protein	NA	NA	NA	NA
AYN88004.1\|211357_212065_+	EAL domain-containing protein	NA	NA	NA	NA
AYN88005.1\|212103_213408_+\|integrase	integrase	NA	NA	NA	NA
AYN88006.1\|213454_214159_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN88007.1\|214348_215164_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
AYN88008.1\|215314_216019_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN88009.1\|216076_216940_-	SDR family NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
AYN88010.1\|217085_218315_-	macrolide efflux MFS transporter Mef(B)	A0A1B0RXG2	Streptococcus_phage	2.1e-74	39.0
AYN88011.1\|218442_219147_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN88012.1\|219250_219496_+	hypothetical protein	NA	NA	NA	NA
AYN88013.1\|219964_220756_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
AYN88014.1\|221610_221796_-	hypothetical protein	NA	NA	NA	NA
AYN88015.1\|221935_222268_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
AYN88016.1\|222437_223229_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AYN88017.1\|223321_224581_-	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
AYN88018.1\|224842_225634_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AYN88019.1\|225639_225930_-	DUF1010 domain-containing protein	NA	NA	NA	NA
AYN88020.1\|226041_226539_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AYN88021.1\|226683_227697_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
227861:227873	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP033095

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

504 : 65143

Escherichia_phage(33.33%)

transposase,integrase

attL 285:344|attR 63917:64082

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
285:344	attL	NA	NA	NA	NA
AYN88035.1\|504_1200_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	7.0e-43	43.0
AYN88036.1\|1491_1758_-	hypothetical protein	NA	NA	NA	NA
AYN88037.1\|2059_3040_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
AYN88038.1\|3180_3381_+	hypothetical protein	NA	NA	NA	NA
AYN88039.1\|3373_5233_+	hypothetical protein	A0A1Q1N989	Escherichia_phage	3.3e-55	29.1
AYN88040.1\|5264_5504_-	transcription factor	NA	NA	NA	NA
AYN88041.1\|5553_6810_-\|integrase	integrase	NA	NA	NA	NA
AYN88042.1\|7066_8977_+\|integrase	site-specific integrase	NA	NA	NA	NA
AYN88043.1\|9109_9442_-	NIPSNAP family protein	NA	NA	NA	NA
AYN88044.1\|9714_10230_+	hypothetical protein	NA	NA	NA	NA
AYN88045.1\|10342_10552_+	hypothetical protein	NA	NA	NA	NA
AYN88112.1\|12450_12843_+	cysteine hydrolase	NA	NA	NA	NA
AYN88046.1\|12980_13865_+	EamA family transporter	NA	NA	NA	NA
AYN88047.1\|13896_15096_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AYN88048.1\|15174_15852_+	TetR family transcriptional regulator	NA	NA	NA	NA
AYN88049.1\|15883_16126_-	relaxase	NA	NA	NA	NA
AYN88050.1\|18511_18991_+	phenol hydroxylase	NA	NA	NA	NA
AYN88051.1\|19187_20278_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
AYN88052.1\|20367_21183_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AYN88053.1\|21269_21572_+	phosphoglucosamine mutase	NA	NA	NA	NA
AYN88054.1\|21465_21717_-	hypothetical protein	NA	NA	NA	NA
AYN88055.1\|21747_23241_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AYN88056.1\|23352_23658_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYN88057.1\|23685_24900_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
AYN88058.1\|25116_26001_-	DUF3363 domain-containing protein	NA	NA	NA	NA
AYN88059.1\|26925_27630_+\|transposase	IS6 family transposase IS1006	A0A077SL39	Escherichia_phage	1.9e-120	85.8
AYN88113.1\|27714_28116_-	hypothetical protein	NA	NA	NA	NA
AYN88060.1\|28124_31076_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
AYN88061.1\|31078_31639_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
AYN88062.1\|31764_32379_-	DUF3330 domain-containing protein	NA	NA	NA	NA
AYN88063.1\|32317_33331_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AYN88064.1\|33475_33973_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AYN88065.1\|34084_34375_+	DUF1010 domain-containing protein	NA	NA	NA	NA
AYN88066.1\|34380_35172_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AYN88067.1\|35433_36693_+	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
AYN88068.1\|36785_37577_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AYN88069.1\|37746_38079_+	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
AYN88070.1\|38218_38404_+	hypothetical protein	NA	NA	NA	NA
AYN88071.1\|39258_40050_-	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
AYN88072.1\|40740_41604_-	SDR family NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
AYN88073.1\|41749_42979_-	macrolide efflux MFS transporter Mef(B)	A0A1B0RXG2	Streptococcus_phage	2.1e-74	39.0
AYN88074.1\|43320_44025_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN88075.1\|44061_45189_-	DUF3883 domain-containing protein	NA	NA	NA	NA
AYN88076.1\|45239_45485_-	hypothetical protein	NA	NA	NA	NA
AYN88077.1\|45490_45682_+	hypothetical protein	NA	NA	NA	NA
AYN88078.1\|46163_46706_-	tunicamycin resistance protein	NA	NA	NA	NA
AYN88079.1\|46718_47579_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
AYN88080.1\|48279_48984_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AYN88081.1\|49447_50053_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
AYN88082.1\|50054_50279_+	reverse transcriptase	NA	NA	NA	NA
AYN88083.1\|57976_59410_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.4e-106	50.9
AYN88084.1\|59443_60652_-	restriction endonuclease	E5E3X4	Burkholderia_phage	2.1e-34	42.5
AYN88085.1\|61409_62114_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYN88086.1\|62440_62629_-	hypothetical protein	NA	NA	NA	NA
AYN88087.1\|62755_62944_-	hypothetical protein	NA	NA	NA	NA
AYN88088.1\|63098_63368_+	hypothetical protein	NA	NA	NA	NA
AYN88089.1\|63364_63646_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AYN88090.1\|63981_65143_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
63917:64082	attR	NA	NA	NA	NA

DBSCAN-SWA_2

72774 : 92131

Enterobacteria_phage(35.71%)

transposase,plate,integrase

attL 70921:70935|attR 88764:88778

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
70921:70935	attL	NA	NA	NA	NA
AYN88114.1\|72774_73860_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A2K9L470	Tupanvirus	3.9e-48	34.4
AYN88097.1\|73881_75006_-	GDP-mannose 4,6-dehydratase	M1HXY1	Acanthocystis_turfacea_Chlorella_virus	6.5e-131	65.0
AYN88098.1\|75019_76405_-	phosphomannomutase	A0A127AWJ1	Bacillus_phage	3.8e-32	26.7
AYN88099.1\|76419_77835_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.6e-54	31.2
AYN88100.1\|78272_79163_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.9e-45	42.0
AYN88101.1\|79302_80283_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.8e-185	99.1
AYN88102.1\|80340_80577_+	hypothetical protein	NA	NA	NA	NA
AYN88103.1\|80684_81674_+\|integrase	integrase	A0A0K0N6I5	Gordonia_phage	1.1e-06	34.9
AYN88104.1\|81878_82991_-\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
AYN88105.1\|83150_83660_-\|plate	baseplate protein	Q1MVJ9	Enterobacteria_phage	1.1e-90	98.8
AYN88106.1\|83671_84253_-	hypothetical protein	Q1MVJ8	Enterobacteria_phage	5.9e-104	100.0
AYN88107.1\|85113_86703_-	hypothetical protein	A0A077SLN8	Escherichia_phage	4.5e-303	98.7
AYN88108.1\|86763_88470_-	hypothetical protein	Q1MVJ5	Enterobacteria_phage	0.0e+00	99.5
AYN88109.1\|88734_89700_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	6.3e-167	98.8
88764:88778	attR	NA	NA	NA	NA
AYN88110.1\|89696_90902_-	ParA family protein	Q1MVJ3	Enterobacteria_phage	9.7e-226	99.8
AYN88111.1\|91270_92131_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	1.8e-157	99.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP033097

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8060 : 80386

Salmonella_phage(92.19%)

integrase,terminase,tail,capsid,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN92362.1\|8060_9288_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	3.7e-172	96.7
AYN92363.1\|9300_10014_+	hypothetical protein	NA	NA	NA	NA
AYN92364.1\|10494_12834_-	recombinase RecA	J9Q736	Salmonella_phage	1.8e-29	85.1
AYN92365.1\|12836_13103_-	hypothetical protein	J9Q7G8	Salmonella_phage	6.8e-31	78.4
AYN92366.1\|13102_14047_-	exonuclease	J9Q7S6	Salmonella_phage	2.5e-168	91.7
AYN92367.1\|14107_15136_-	regulator	J9Q7Z3	Salmonella_phage	2.3e-143	86.0
AYN92368.1\|15253_15685_-	hypothetical protein	J9Q6I8	Salmonella_phage	9.9e-64	83.9
AYN92369.1\|15938_16163_+	hypothetical protein	J9Q735	Salmonella_phage	2.4e-13	55.6
AYN92370.1\|16223_16787_+	DNA-binding protein	J9Q7G7	Salmonella_phage	3.3e-67	68.2
AYN92371.1\|16817_20324_-	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	89.5
AYN92372.1\|20298_20502_-	hypothetical protein	J9Q6I7	Salmonella_phage	4.8e-29	88.1
AYN92373.1\|20504_21740_-	porphyrin biosynthesis protein	J9Q733	Salmonella_phage	2.3e-198	81.3
AYN92374.1\|21835_23944_-	cobalamin biosynthesis protein CobT	J9Q7G6	Salmonella_phage	6.9e-227	66.2
AYN92375.1\|24042_24255_-	hypothetical protein	NA	NA	NA	NA
AYN92376.1\|24506_24893_+	transcriptional regulator	NA	NA	NA	NA
AYN92377.1\|24887_25991_-\|integrase	integrase	A0A1P8DTG6	Proteus_phage	1.3e-27	33.8
AYN92378.1\|26201_26447_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	4.5e-13	44.9
AYN92379.1\|26443_26794_-	hypothetical protein	Q716B1	Shigella_phage	7.9e-27	51.7
AYN92380.1\|28447_28738_-	C-type natriuretic protein	J9Q7S1	Salmonella_phage	2.4e-37	79.2
AYN92381.1\|28883_29099_-	hypothetical protein	J9Q6I3	Salmonella_phage	3.3e-20	72.5
AYN92382.1\|29095_30418_-	DNA ligase	J9Q7G5	Salmonella_phage	3.1e-241	91.1
AYN92383.1\|30414_30672_-	hypothetical protein	J9Q7R9	Salmonella_phage	3.9e-15	60.2
AYN92384.1\|30952_31735_-	hypothetical protein	J9Q7Z0	Salmonella_phage	1.5e-54	41.1
AYN92385.1\|31810_32992_-	DNA primase	J9Q720	Salmonella_phage	4.8e-209	93.8
AYN92386.1\|33073_34414_-	DNA helicase	J9Q7G4	Salmonella_phage	3.4e-235	93.5
AYN92387.1\|34457_35198_-	hypothetical protein	J9Q7R8	Salmonella_phage	2.2e-127	89.6
AYN92388.1\|35480_36248_+	hypothetical protein	NA	NA	NA	NA
AYN92389.1\|36300_36660_-	hypothetical protein	J9Q7G3	Salmonella_phage	3.3e-44	96.9
AYN92390.1\|36659_37325_-	plasmid stability protein	J9Q7R7	Salmonella_phage	9.5e-114	95.0
AYN92473.1\|37643_37913_+	DUF1778 domain-containing protein	NA	NA	NA	NA
AYN92391.1\|37920_38442_+	N-acetyltransferase	NA	NA	NA	NA
AYN92392.1\|38474_38660_-	hypothetical protein	J9Q7G2	Salmonella_phage	4.9e-20	75.0
AYN92393.1\|38610_38862_-	hypothetical protein	J9Q7R6	Salmonella_phage	4.5e-24	74.4
AYN92394.1\|38863_39556_-	hypothetical protein	J9Q7Y7	Salmonella_phage	4.0e-123	93.5
AYN92395.1\|39569_39893_-	hypothetical protein	J9Q6E7	Salmonella_phage	2.9e-44	88.8
AYN92396.1\|39967_40756_-	receptor-recognizing protein	E5DHZ0	Enterobacter_phage	2.4e-55	69.6
AYN92397.1\|44073_44286_-	hypothetical protein	NA	NA	NA	NA
AYN92474.1\|44465_44927_+	hypothetical protein	NA	NA	NA	NA
AYN92398.1\|45562_50290_-	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	74.2
AYN92399.1\|50307_50901_-\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	2.0e-99	90.9
AYN92400.1\|50888_51686_-\|tail	phage tail protein	J9Q7R4	Salmonella_phage	1.3e-154	94.0
AYN92401.1\|51678_52410_-\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.5e-133	96.6
AYN92402.1\|52459_52795_-\|tail	phage tail protein	J9Q6E1	Salmonella_phage	8.0e-53	87.3
AYN92403.1\|52837_57400_-\|tail	phage tail tape measure protein	J9Q712	Salmonella_phage	0.0e+00	67.7
AYN92404.1\|57407_57677_-	hypothetical protein	J9Q7F7	Salmonella_phage	1.7e-34	94.8
AYN92405.1\|57757_58075_-	hypothetical protein	J9Q7R3	Salmonella_phage	3.3e-48	95.2
AYN92406.1\|58136_58883_-	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	6.2e-106	83.0
AYN92407.1\|58957_59341_-	hypothetical protein	J9Q6D8	Salmonella_phage	1.2e-57	82.7
AYN92408.1\|59342_59816_-	hypothetical protein	J9Q711	Salmonella_phage	3.3e-76	90.4
AYN92409.1\|59806_60151_-	hypothetical protein	J9Q7F6	Salmonella_phage	2.3e-55	95.6
AYN92410.1\|60230_61064_-	hypothetical protein	J9Q7R2	Salmonella_phage	1.3e-141	92.1
AYN92411.1\|61063_61498_-	hypothetical protein	J9Q7Y3	Salmonella_phage	1.1e-59	82.6
AYN92412.1\|61542_62463_-	Ig domain-containing protein	J9Q6D6	Salmonella_phage	2.4e-123	80.2
AYN92413.1\|62536_63412_-\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	4.2e-154	93.8
AYN92414.1\|63437_64325_-	hypothetical protein	J9Q7F4	Salmonella_phage	5.1e-131	87.6
AYN92415.1\|64346_65921_-	hypothetical protein	J9Q7R1	Salmonella_phage	3.2e-285	92.7
AYN92416.1\|65947_67204_-\|terminase	terminase	J9Q7Y2	Salmonella_phage	7.5e-245	96.4
AYN92417.1\|67203_67836_-	DNA-binding protein	J9Q6D4	Salmonella_phage	1.8e-90	83.8
AYN92418.1\|68032_68299_-	hypothetical protein	J9Q757	Salmonella_phage	1.4e-36	88.6
AYN92419.1\|68308_69208_-	hypothetical protein	J9Q7I6	Salmonella_phage	1.3e-166	98.3
AYN92420.1\|69204_69459_-	hypothetical protein	J9Q7U0	Salmonella_phage	4.1e-41	98.8
AYN92421.1\|69451_70090_-	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	1.2e-110	98.6
AYN92422.1\|70086_70755_-	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	5.6e-106	89.6
AYN92423.1\|70754_71453_-	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	5.1e-110	87.1
AYN92424.1\|71517_73077_+	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.1e-277	92.1
AYN92425.1\|73079_73358_+	hypothetical protein	J9Q7T9	Salmonella_phage	4.6e-22	58.2
AYN92426.1\|73390_73990_+	hypothetical protein	NA	NA	NA	NA
AYN92427.1\|74130_74679_+	hypothetical protein	NA	NA	NA	NA
AYN92428.1\|74706_75126_+	hypothetical protein	J9Q806	Salmonella_phage	8.2e-39	58.8
AYN92429.1\|75130_75652_+	transcriptional regulator	J9Q6L0	Salmonella_phage	7.3e-53	68.2
AYN92430.1\|75949_76600_+	hypothetical protein	J9Q754	Salmonella_phage	6.4e-99	84.7
AYN92431.1\|76647_76878_+	hypothetical protein	NA	NA	NA	NA
AYN92432.1\|77494_77977_-	hypothetical protein	J9Q805	Salmonella_phage	3.2e-63	70.4
AYN92433.1\|78186_78777_-	hypothetical protein	NA	NA	NA	NA
AYN92434.1\|79060_79471_-	hypothetical protein	NA	NA	NA	NA
AYN92435.1\|79552_79948_-	hypothetical protein	J9Q7I1	Salmonella_phage	2.4e-32	53.8
AYN92436.1\|80074_80386_-	hypothetical protein	J9Q7T7	Salmonella_phage	5.7e-29	63.1

DBSCAN-SWA_2

88264 : 112868

Salmonella_phage(77.78%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYN92476.1\|88264_89821_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-104	42.9
AYN92443.1\|89817_91137_+	restriction endonuclease subunit S	NA	NA	NA	NA
AYN92444.1\|91258_94375_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	1.7e-27	24.2
AYN92445.1\|94433_94910_-	hypothetical protein	J9Q747	Salmonella_phage	6.0e-78	89.2
AYN92446.1\|95013_95628_-	hypothetical protein	A0A0E3GMH9	Enterobacteria_phage	6.7e-98	81.4
AYN92447.1\|95630_95912_-	hypothetical protein	A0A0E3JPT1	Enterobacteria_phage	2.5e-39	76.3
AYN92448.1\|95966_96536_-	hypothetical protein	J9Q7H6	Salmonella_phage	2.3e-52	61.4
AYN92449.1\|96675_96834_-	DUF3927 domain-containing protein	NA	NA	NA	NA
AYN92450.1\|96833_97259_-	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	2.6e-56	80.9
AYN92451.1\|97352_97541_-	hypothetical protein	J9Q800	Salmonella_phage	2.1e-10	51.6
AYN92452.1\|97550_98045_-	hypothetical protein	J9Q6J9	Salmonella_phage	5.2e-24	55.4
AYN92453.1\|98193_98784_-	ribonuclease HI	J9Q745	Salmonella_phage	5.8e-91	82.2
AYN92454.1\|99370_99601_-	hypothetical protein	J9Q7H5	Salmonella_phage	5.9e-31	84.2
AYN92455.1\|99787_100381_-	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	1.7e-98	85.8
AYN92456.1\|100534_101491_-	hypothetical protein	J9Q7Z9	Salmonella_phage	8.0e-98	72.4
AYN92457.1\|101535_102090_-	3'-5' exonuclease	J9Q6J8	Salmonella_phage	2.8e-95	95.1
AYN92458.1\|102099_102519_-	hypothetical protein	J9Q743	Salmonella_phage	4.6e-66	95.7
AYN92459.1\|102582_103227_-	hypothetical protein	J9Q7H4	Salmonella_phage	7.8e-113	95.8
AYN92460.1\|103226_103703_-	dihydrofolate reductase	J9Q7T1	Salmonella_phage	7.0e-87	96.2
AYN92461.1\|103699_104113_-	hypothetical protein	J9Q7Z8	Salmonella_phage	3.3e-72	98.5
AYN92462.1\|104114_105230_-	thymidylate synthase	J9Q6J6	Salmonella_phage	1.1e-218	99.2
AYN92463.1\|105397_106276_-	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	9.8e-159	97.9
AYN92464.1\|106541_107111_-	hypothetical protein	J9Q7Z7	Salmonella_phage	7.9e-85	80.4
AYN92465.1\|107107_107848_-	hypothetical protein	A0A2I7R0K2	Vibrio_phage	2.3e-23	40.0
AYN92466.1\|107859_108606_-	hypothetical protein	J9Q6J5	Salmonella_phage	1.4e-126	91.9
AYN92467.1\|108595_110512_-	exonuclease	J9Q741	Salmonella_phage	3.4e-297	86.5
AYN92468.1\|110508_110787_-	hypothetical protein	J9Q7H1	Salmonella_phage	1.5e-20	68.3
AYN92469.1\|110741_111827_-	exonuclease SbcCD subunit D	J9Q7S9	Salmonella_phage	1.2e-203	97.5
AYN92470.1\|112223_112868_-	hypothetical protein	J9Q739	Salmonella_phage	1.4e-122	98.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP033093

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP033093_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033093_1

19489-19608

Orphan

Consensus_repeat	Method
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033093_1

>merge|CP033093|1|19489-19608|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCACTGTAATTTTCATGAAAGGTGGATGGCTGCGCACTGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

>CP033093|1|1|19489-19608|CRISPRCasFinder
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA	CTGTAATTTTCATGAAAGGTGGATGGCTGCGCAC
TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATGGGTACGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP033093.1\|AYN87800.1\|16856_17339_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
CP033093.1\|AYN87801.1\|21319_21676_+\|DNA-distortion-polypeptide-3	unknown	unknown	unknown
CP033093.1\|AYN87777.1\|8192_9053_+\|class-A-broad-spectrum-beta-lactamase-TEM-1	unknown	unknown	gnl\|CDD\|185339
CP033093.1\|AYN87778.1\|9599_9794_-\|hypothetical-protein	unknown	unknown	unknown
CP033093.1\|AYN87792.1\|24895_24979_-\|Damage-inducible-protein	unknown	unknown	unknown
CP033093.1\|AYN87794.1\|29018_30152_-\|permease	unknown	unknown	gnl\|CDD\|223773
CP033093.1\|AYN87782.1\|14948_15542_+\|DUF1449-family-protein	unknown	unknown	gnl\|CDD\|369302
CP033093.1\|AYN87780.1\|13372_14437_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366088
CP033093.1\|AYN87790.1\|23053_23716_-\|peptidyl-arginine-deiminase	unknown	unknown	gnl\|CDD\|222854
CP033093.1\|AYN87791.1\|24096_24741_+\|resolvase	unknown	unknown	gnl\|CDD\|239736
CP033093.1\|AYN87789.1\|22674_22956_-\|CopG-family-transcriptional-regulator	unknown	unknown	unknown
CP033093.1\|AYN87784.1\|18104_18386_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP033093.1\|AYN87787.1\|19860_20697_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
CP033093.1\|AYN87793.1\|25331_28319_-\|Tn3-family-transposase	unknown	unknown	gnl\|CDD\|376561
CP033093.1\|AYN87783.1\|16336_16648_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376849
CP033093.1\|AYN87785.1\|18375_18627_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484
CP033093.1\|AYN87779.1\|12621_13371_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
CP033093.1\|AYN87788.1\|21672_22650_-\|hypothetical-protein	unknown	unknown	unknown
CP033093.1\|AYN87786.1\|19691_19922_-\|hypothetical-protein	unknown	unknown	unknown
CP033093.1\|AYN87781.1\|14479_14680_-\|glycogen-synthase	unknown	unknown	gnl\|CDD\|179501

Protein	Function_ID	Function_description	E-value
CP033093.1\|AYN87800.1\|16856_17339_+\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.0271e-25
CP033093.1\|AYN87777.1\|8192_9053_+\|class-A-broad-spectrum-beta-lactamase-TEM-1	gnl\|CDD\|185339	PRK15442, PRK15442, beta-lactamase TEM; Provisional.	0
CP033093.1\|AYN87781.1\|14479_14680_-\|glycogen-synthase	gnl\|CDD\|179501	PRK02922, PRK02922, cell surface composition regulator GlgS.	5.06059e-39
CP033093.1\|AYN87794.1\|29018_30152_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.13072e-24
CP033093.1\|AYN87782.1\|14948_15542_+\|DUF1449-family-protein	gnl\|CDD\|369302	pfam07290, DUF1449, Protein of unknown function (DUF1449). This family consists of several bacterial proteins of around 210 residues in length. The function of this family is unknown.	2.24881e-46
CP033093.1\|AYN87780.1\|13372_14437_+\|hypothetical-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	0.00145059
CP033093.1\|AYN87791.1\|24096_24741_+\|resolvase	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	1.23015e-71
CP033093.1\|AYN87784.1\|18104_18386_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.35296e-20
CP033093.1\|AYN87787.1\|19860_20697_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	8.48883e-22
CP033093.1\|AYN87783.1\|16336_16648_+\|hypothetical-protein	gnl\|CDD\|376849	pfam02601, Exonuc_VII_L, Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyzes exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.	0.00640889
CP033093.1\|AYN87785.1\|18375_18627_-\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08
CP033093.1\|AYN87779.1\|12621_13371_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	1.34926e-61
CP033093.1\|AYN87793.1\|25331_28319_-\|Tn3-family-transposase	gnl\|CDD\|376561	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases.	0
CP033093.1\|AYN87790.1\|23053_23716_-\|peptidyl-arginine-deiminase	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	3.31211e-18

>CP033093.1|AYN87785.1|18375_18627_-|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>CP033093.1|AYN87784.1|18104_18386_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADLR
>CP033093.1|AYN87800.1|16856_17339_+|restriction-endonuclease
MPGFPQKINYLRKIDPFVFEELLLEGFEAHGFRTIRNKRYTGDGGIDGQVIIGKYRYLIQAKRYRGHIALQHVQEFEKLLKRHNCRGLFCHTGKTGAGSKSVSIASERMEIISGQRLIDLLTPGSSFTIATAPQTMMKRTAATLETSTIVKDAGVMTPTY
>CP033093.1|AYN87783.1|16336_16648_+|hypothetical-protein
MKKIILSALACTALLTGCVSQDKGNAMQSQLNNQQRQINELSVRLQSAESRLSKQEEKLRNELLQSSGYCYLNGARYSTGTVLYGRICQNQSGSASWQVYSRR
>CP033093.1|AYN87782.1|14948_15542_+|DUF1449-family-protein
MILFADYNTPYLFAISFVLLIGLLEIFALICGHMLSGALDAHLDHYDSITTGHISQALLYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLFVVPVSLLFTIIAVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKIFTKGDKVLIIWVMLPTY
>CP033093.1|AYN87781.1|14479_14680_-|glycogen-synthase
MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH
>CP033093.1|AYN87780.1|13372_14437_+|hypothetical-protein
MRYLLTVIAFIMGFSALPVWAMNCYAEHEGGNTVVIGYVPRIAIPSDGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYPSAWVNIMMLLASGQDFYNQNSYTLGVTYNGVDYDSTSTRAIAAPECIDVKGAGIYSNTYKNPAVCSGGPEPQLSVTFPVRVQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGTGTIDTDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSRTIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN
>CP033093.1|AYN87779.1|12621_13371_+|molecular-chaperone
MRYLNTKNIIAAGVLLSCMNSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKKLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPNEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVLPFSHADTQFKNVPSNFQVGYINDFGGLSFYEINCPTVNNSCNVSVAKRDK
>CP033093.1|AYN87778.1|9599_9794_-|hypothetical-protein
MEKIGNDIPHLIDQAIDFMASTQAFREYLKKLPPRNTIPSDIPEENVPLYLQRLEYYRQLYRPK
>CP033093.1|AYN87777.1|8192_9053_+|class-A-broad-spectrum-beta-lactamase-TEM-1
MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
>CP033093.1|AYN87786.1|19691_19922_-|hypothetical-protein
MLLISFLWRIFVFFVTLSKFIHYLWFLSSDGEIITTKAEICKVVYPPYVFPPKHGSHERIFIIYIQYDRNAQVSTF
>CP033093.1|AYN87787.1|19860_20697_+|RepB-family-plasmid-replication-initiator-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTPQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVERVARRASKLRFSYKIDKESEGLDIRIPYGFRG
>CP033093.1|AYN87801.1|21319_21676_+|DNA-distortion-polypeptide-3
MEYQVREFINEKYTKAVNILKDNLKENYHVFYGVRLIEILFPASEYGTDAFFKEFELINSVILPLVIFDLTQRKPMMIISFDKILDASLLEGTNIVVLECITLADLLTNDNIDFLYKS
>CP033093.1|AYN87788.1|21672_22650_-|hypothetical-protein
MRYLTELICDLYRLTDHHKLTTATFKNLADIKLFKPTADADTILQLENIFSEYSLRYIDKDLAEILSNLITTDKKHSLDFDFNKIQSLTDSKSFGCGWSKVINGSWFKDLYSWGEGMYPAENLKAENILDWKDNIWHIEHEGFPPRPPINVKYYSWFDRYVASNSGGSHHAAMVVYQSVRDGLEYKREAVIKQLSIDPGTVEILDKNYYSFIFQIKTLNKETRIYTSEYEFTDALKDFGQNRHTILKPVNYVSNIKLVFIPKDALKTNSETFRNWFHSAISCGKIISLPDYLKNPAHYHTLHYSHEVDSITLGDPSRKFKLKGDS
>CP033093.1|AYN87789.1|22674_22956_-|CopG-family-transcriptional-regulator
MALKLNRPNIDESQQPATNAETARFISGATRAPVVGKPKLMNFRLSAHFEDILEAEAIRTGQSKTTVLKAALAMYNSQDENIKNHWLLESAKF
>CP033093.1|AYN87790.1|23053_23716_-|peptidyl-arginine-deiminase
MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTIPVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSQEFRSALTVSDIVVTLVKPSSDFESETLTSVTEKIRTAQKANAALEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISELDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL
>CP033093.1|AYN87791.1|24096_24741_+|resolvase
MTSNVPTSFVRAYLRASTAEQDASRALETIEAFARERGLIICSYYIENESGTRLERPELFRLLRDCQQNDILLIEDVDRLSRLSGEDWNTLKKMIRQKDIRVMAVNVPTTWINSGMSEFDSRLFAAINDMLLDMLAAVARRDYEQRRERQKQGIEKAKKDGKYKGRKPNQARHDAIIRLIESGSSWTQVQKVLGCSRGTISNALKRKTGQKSSK
>CP033093.1|AYN87792.1|24895_24979_-|Damage-inducible-protein
MIDKAIIVLGALISLLELIRYLLQLMG
>CP033093.1|AYN87793.1|25331_28319_-|Tn3-family-transposase
MARRQILSLSERESLLALPDDELTLTRMAYFSEHDLALISAHRKPASRFGFAVLLCYLKNVGFAPDKKISPSDALLKHIASRLKLTGDLWPAYLSGRDTTRREHLTELYRYLGVKAFTGKIQQDCITHLLSMATRTDKGILLAEELLVYLRQNNVIIPAIDVVERTCAEVMAGGDKIVFQTLNAPLTPAHRDALDHLLESSDNQPSRLTWLLQPPGKINGKNVLQHLDRLSSIESLALPEGIDRTIHQNRLLKLAREGRKMSSRDLTRFSAARRHAILVCVLEEARATLTDEVIELHERMLNSLFSKAKRTQAERLQQTGKLIQSKLRQYIDVGQALSDARDSGGDPWLAIENILPWAEFVASLDETRHLARKNNFDPLHIITEKYSTLRKYAPRMLSALQLVATPAAQPLADALVVIKDMYRKQSRKVPAAAPLEFVPESWRKVVITPVGIDRQYYEFCALSELKGALRSGDIWVKGSRRYKNFDDYLIPEKDFDKLTPALPLPVSADYHEYITSRMTLLQSRLEEVNAMAALGELPDVEISDRGVKVSPLDNCVPAQVSPLAELVYSMLPRPKITEILDEVNSWTTFTRHFSHIKNDITRPDTRLLLTTILADGINLGLTKMAEACPGSTKSSLEDIQAWYIRDETYSAALAELVNAQGKRPLAAFWGDGTTSSSDGQNFRTGSSGRYAGQVNPKYGQEPGRQFYTHISDQYSPFYTCIISRVRDSTHVLDGLLYHESDLEIREHYTDTAGFTDHVFALMHLLGFAFCPRIRDLHDKKLFIKGKAEKYPALQSLISTTSLNLKEIEIHWREVLRLATSIKQGTVTASLMLKKLASYPKQNGLAKALREIGRIERTLFMLDWFRDPALRRRVQAGLNKGEARNALARAVFMHRLGEIRDRKPENQSYRASGLTLLTAAISLWNTVYMERAVDALKRKGVKINEQLLSHLSPLGWEHINLTGDYIWKSNRIPASGKFRRLRPAKVERSKNSLNVQ
>CP033093.1|AYN87794.1|29018_30152_-|permease
MNSWISMLQDAAEMFLFLAVELSLLFIVISAGVSLIRQKVPDHKIQQLIGAKKGKGYLLASLLGAVTPFCSCSTIPMLRGLLSAKAGFGPTLTFLFVSPLLNPIIVGLMWVTFGWKVTLLYAIIAAGVSVLASIVLDLLGFERHIVDHKNSASSGCTTKCDDSEASVKTSAGSSCCSTSSTQLPLKTSCCTSSANPIINLRTVKNEQNVSACCSSISSEQPAVSCCSSENLGNVNLTTNTTSGPIKLAMKDALQQFKDVLPYLLLSVLIGSFIYGFIPSEWIAAHAGADNPLAIPLSAVVGIPLYIRAEAVIPLASVLMTKGMGLGALMALIIGSAGASLTEVILLKSMFRMPMIVAFLTVILGMAILMGYLTQLLF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
CP033093_1	1.1\|19532\|34\|CP033093\|CRISPRCasFinder	19532-19565	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

2. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

3. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

4. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

5. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

6. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

7. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

8. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

9. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

10. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

11. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

12. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

13. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

14. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

15. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

16. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

17. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

18. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

19. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

20. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

21. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

22. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

23. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

24. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

25. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

26. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

27. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

28. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

29. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

30. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

31. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

32. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

33. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

34. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

35. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

36. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

37. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

38. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

39. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

40. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

41. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

42. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

43. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

44. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

45. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

46. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

47. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

48. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

49. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

50. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

51. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

52. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

53. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

54. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

55. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

56. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

57. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

58. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

59. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

60. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

61. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

62. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

63. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

64. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

65. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

66. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

67. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

68. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

69. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

70. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

71. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

72. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

73. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

74. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

75. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

76. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

77. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

78. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

79. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

80. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

81. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

82. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

83. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

84. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

85. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

86. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

87. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

88. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

89. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

90. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

91. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

92. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

93. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

94. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

95. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

96. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

97. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

98. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

99. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

100. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

101. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

102. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

103. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

104. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

105. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

106. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

107. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

108. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

109. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

110. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

111. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

112. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

113. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

114. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

115. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

116. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

117. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

118. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

119. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

120. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

121. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

122. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

123. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

124. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

125. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

126. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

127. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

128. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

129. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

130. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

131. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

132. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

133. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

134. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

135. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

136. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

137. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

138. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

139. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

140. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

141. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

142. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

143. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

144. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

145. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

146. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

147. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

148. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

149. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

150. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

151. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

152. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

153. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

154. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

155. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

156. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

157. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

158. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

159. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

160. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

161. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

162. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

163. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

164. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

165. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

166. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgcac	Protospacer
**********************************

167. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtgattttcatgaaaggtggatggctgcgcac	Protospacer
****.*****************************

168. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

169. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgcgggc	Protospacer
******************************* .*

170. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

171. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

172. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

173. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

174. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

175. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

176. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

177. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

178. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

179. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatgggtacgcac	Protospacer
************************** *.*****

180. spacer 1.1|19532|34|CP033093|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

ctgtaattttcatgaaaggtggatggctgcgcac	CRISPR spacer
ctgtaattttcatgaaaggtggatggctgttcga	Protospacer
*****************************. *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage