CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP033146	Vibrio owensii strain V180403 plasmid pVOWZ3, complete sequence	0 crisprs	NA	4
CP033147	Vibrio owensii strain V180403 plasmid pVOWZ4, complete sequence	0 crisprs	NA	0
CP033145	Vibrio owensii strain V180403 chromosome 2, complete sequence	0 crisprs	cas3,csa3,WYL	1
CP033144	Vibrio owensii strain V180403 chromosome 1, complete sequence	0 crisprs	WYL,DEDDh,RT,csx1,cas2,DinG,cas3,csa3	2

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5378

Caulobacter_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO24075.1\|1527_1812_+	hypothetical protein	NA	NA	NA	NA
AYO24076.1\|1880_2159_-	hypothetical protein	NA	NA	NA	NA
AYO24077.1\|2158_2557_-	hypothetical protein	NA	NA	NA	NA
AYO24078.1\|2676_3093_-	hypothetical protein	NA	NA	NA	NA
AYO24079.1\|3180_3594_-	hypothetical protein	NA	NA	NA	NA
AYO24080.1\|3753_4092_-	hypothetical protein	NA	NA	NA	NA
AYO24081.1\|4189_5083_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	3.8e-49	35.8
AYO24148.1\|5192_5378_-	hypothetical protein	A0A1Z1LX74	Escherichia_phage	8.7e-09	58.5

DBSCAN-SWA_2

12163 : 14549

Clostridioides_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO24091.1\|12163_13606_-	hypothetical protein	A0A2R2ZGH5	Clostridioides_phage	3.7e-06	22.8
AYO24092.1\|13628_14549_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7

DBSCAN-SWA_3

18134 : 19055

Vibrio_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO24098.1\|18134_19055_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7

DBSCAN-SWA_4

29154 : 35350

Escherichia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO24107.1\|29154_29820_-	chromosome partitioning protein ParA	A0A222YXS3	Escherichia_phage	3.9e-35	39.9
AYO24108.1\|30115_31060_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.7e-71	52.6
AYO24109.1\|31629_34611_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.8e-292	52.1
AYO24110.1\|34765_35350_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.1e-24	37.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033144

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2543454 : 2550141

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO20800.1\|2543454_2543925_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	49.3
AYO20801.1\|2544094_2545204_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.0e-64	40.4
AYO20802.1\|2545362_2546016_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.9e-34	38.3
AYO20803.1\|2546027_2547152_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	7.8e-44	35.8
AYO20804.1\|2547159_2547609_-	transcriptional regulator NrdR	NA	NA	NA	NA
AYO20805.1\|2547735_2548986_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.7
AYO20806.1\|2549001_2550141_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.3e-62	42.0

DBSCAN-SWA_2

2627672 : 2634738

Megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO20867.1\|2627672_2628098_-	nucleoside-diphosphate kinase	L7Y4C4	Megavirus	2.7e-21	40.6
AYO20868.1\|2628198_2629497_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	9.1e-36	34.7
AYO20869.1\|2629669_2629864_-	Fe-S assembly protein IscX	NA	NA	NA	NA
AYO20870.1\|2629908_2630247_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
AYO20871.1\|2630260_2632114_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.8e-109	39.8
AYO20872.1\|2632135_2632651_-	co-chaperone HscB	NA	NA	NA	NA
AYO20873.1\|2632706_2633030_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	4.0e-25	50.5
AYO20874.1\|2633102_2633486_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	5.4e-53	78.2
AYO20875.1\|2633523_2634738_-	IscS subfamily cysteine desulfurase	A0A1X7C038	Faustovirus	1.7e-31	30.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP033145

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

519187 : 551029

Vibrio_phage(43.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYO22428.1\|519187_522106_-	hypothetical protein	A0A2I7QLP4	Vibrio_phage	4.1e-12	43.0
AYO22429.1\|522105_522582_-	hypothetical protein	NA	NA	NA	NA
AYO22430.1\|522571_525586_-	hypothetical protein	A0A0H5AWE4	Pseudomonas_phage	1.1e-44	25.8
AYO22431.1\|525575_525890_-	hypothetical protein	NA	NA	NA	NA
AYO22432.1\|525907_526237_-	hypothetical protein	K7YQ33	uncultured_Mediterranean_phage	4.7e-05	30.7
AYO22433.1\|526281_527190_-	hypothetical protein	G8CLB2	Synechococcus_phage	1.1e-35	34.5
AYO22434.1\|527179_527626_-	hypothetical protein	NA	NA	NA	NA
AYO22435.1\|527625_528057_-	DUF1320 domain-containing protein	A0A0M3VI88	Ralstonia_phage	8.8e-20	40.9
AYO22436.1\|528060_528525_-	hypothetical protein	A0A0C4UQZ0	Shigella_phage	4.9e-08	40.7
AYO22437.1\|528596_529490_-	hypothetical protein	L7P7Y9	Pseudomonas_phage	4.4e-74	50.0
AYO22438.1\|529536_529929_-	hypothetical protein	NA	NA	NA	NA
AYO22439.1\|529929_531087_-	hypothetical protein	C9DGP0	Escherichia_phage	7.0e-72	44.7
AYO22440.1\|531314_531773_-	phage virion morphogenesis protein	Q5ZQY1	Pseudomonas_phage	7.1e-20	40.4
AYO22441.1\|531772_531970_-	hypothetical protein	NA	NA	NA	NA
AYO22442.1\|531979_533383_-	F protein	A0A2H4IYU7	uncultured_Caudovirales_phage	1.0e-64	47.5
AYO22443.1\|533503_535084_-	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	2.7e-127	49.2
AYO22444.1\|535104_536733_-	hypothetical protein	A0A0C4UR29	Shigella_phage	8.6e-209	68.2
AYO22445.1\|536732_537317_-	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	4.2e-25	35.8
AYO22446.1\|537474_537765_-	ArsR family transcriptional regulator	A0A2I7S9D8	Vibrio_phage	4.8e-22	55.3
AYO22447.1\|537751_538078_-	DUF2730 family protein	A0A2I7S9E2	Vibrio_phage	1.8e-09	37.2
AYO22448.1\|538074_538293_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
AYO22449.1\|538289_538796_-	hypothetical protein	A0A2I7S9B5	Vibrio_phage	1.3e-22	43.6
AYO22450.1\|539051_539498_-	hypothetical protein	M4M9N1	Vibrio_phage	4.6e-48	62.1
AYO22451.1\|539642_540065_-	transcriptional regulator	A0A0C4UR27	Shigella_phage	2.5e-19	39.4
AYO22452.1\|540136_540742_-	hypothetical protein	NA	NA	NA	NA
AYO22453.1\|540885_541152_-	hypothetical protein	NA	NA	NA	NA
AYO22454.1\|541160_541700_-	hypothetical protein	A0A2P9JZH6	Alteromonadaceae_phage	2.1e-26	47.2
AYO22455.1\|541866_542442_-	regulatory protein GemA	M4MB83	Vibrio_phage	2.1e-24	36.2
AYO22456.1\|542434_542911_-	hypothetical protein	NA	NA	NA	NA
AYO22457.1\|542903_543584_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	2.1e-28	35.3
AYO22458.1\|543588_543768_-	hypothetical protein	A0A2H5BQG4	Vibrio_phage	2.3e-06	63.0
AYO22459.1\|543770_544133_-	hypothetical protein	A0A2I7RZB2	Vibrio_phage	1.2e-43	71.7
AYO22460.1\|544193_544388_-	hypothetical protein	A0A2I7S9A9	Vibrio_phage	2.7e-05	35.6
AYO22461.1\|544384_544585_-	ANR family transcriptional regulator	NA	NA	NA	NA
AYO22462.1\|544596_545220_-	DUF3164 family protein	A0A2H4IYN0	uncultured_Caudovirales_phage	5.9e-41	43.3
AYO22463.1\|545207_545405_-	hypothetical protein	NA	NA	NA	NA
AYO22464.1\|545389_545662_-	hypothetical protein	NA	NA	NA	NA
AYO22465.1\|545723_546074_-	hypothetical protein	NA	NA	NA	NA
AYO22466.1\|546063_547014_-	DNA transposition protein	M4M9P4	Vibrio_phage	1.3e-79	49.7
AYO22467.1\|547031_549032_-	DDE endonuclease	M4M9R2	Vibrio_phage	4.9e-198	53.0
AYO22468.1\|549031_549514_-	hypothetical protein	A4JWN5	Burkholderia_virus	5.2e-45	50.9
AYO22469.1\|549649_549886_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	9.3e-16	64.1
AYO22470.1\|550054_551029_+	helix-turn-helix domain-containing protein	A0A2I7S9A5	Vibrio_phage	7.5e-59	72.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033146

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033144

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP033145

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection