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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP027000 Aeromonas salmonicida subsp. salmonicida 01-B526 chromosome, complete genome 11 crisprs csa3,DinG,cas3,DEDDh,WYL,TnsE_C 0 1 8 0

Results visualization

1. CP027000
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_1 1370-1456 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_2 190179-190277 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_3 1212279-1212423 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_4 1678764-1678887 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_5 2904421-2904516 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_6 3296758-3296896 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_7 3359569-3359659 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_8 3711720-3711832 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_9 3957153-3957252 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_10 4482532-4482674 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP027000_11 4565279-4565372 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP027000_6 6.1|3296811|33|CP027000|CRISPRCasFinder 3296811-3296843 33 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 99642-99674 8 0.758

1. spacer 6.1|3296811|33|CP027000|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 8, identity: 0.758

gtgctgatcttcgacgttgagctgctgggtatc	CRISPR spacer
actctgatcttcgacgtagagctactgtcaatc	Protospacer
.. ************** *****.***   ***

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1633181 : 1716058 78 Aeromonas_virus(71.43%) capsid,portal,holin,tRNA,transposase,integrase,terminase,head,tail attL 1629389:1629410|attR 1665666:1665687
DBSCAN-SWA_2 2556316 : 2687081 104 uncultured_Caudovirales_phage(12.0%) tRNA,transposase,plate,protease,bacteriocin,lysis NA
DBSCAN-SWA_3 2856102 : 2887183 50 Aeromonas_phage(77.14%) NA NA
DBSCAN-SWA_4 3302928 : 3359486 51 Bacillus_phage(15.38%) transposase,integrase,tRNA attL 3304153:3304212|attR 3358350:3359513
DBSCAN-SWA_5 3787449 : 3797373 10 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_6 3916421 : 3924618 6 Klosneuvirus(16.67%) NA NA
DBSCAN-SWA_7 3966113 : 4078939 113 Aeromonas_virus(66.0%) capsid,portal,holin,tRNA,transposase,integrase,terminase,head,tail attL 4002790:4002844|attR 4039566:4039620
DBSCAN-SWA_8 4620743 : 4679681 46 Indivirus(18.18%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage