CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033325	Georgenia sp. ZLJ0423 chromosome, complete genome	11 crisprs	NA	3	5	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033325_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_1

50898-51021

Orphan

Consensus_repeat	Method
CGCCGACCGACGAGCCCACGGCGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP033325_1

>merge|CP033325|1|50898-51021|CRISPRCasFinder
CGCCGACCGACGAGCCCACGGCGCCCCCCACCGACGCGCCCCCCGCGCCGACGCCGACCGACGAGCCCACCGCGCCGCCGACGGAGGGTCCGACCGAGGACCCGACGGCCGGCCCCACGGCGCC

>CP033325|1|1|50898-51021|CRISPRCasFinder
CGCCGACCGACGAGCCCACGGCGCC	CCCCACCGACGCGCCCCCCGCGCCGA
CGCCGACCGACGAGCCCACCGCGCC	GCCGACGGAGGGTCCGACCGAGG
ACCCGACGGCCGGCCCCACGGCGCC

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Crispr_ID: CP033325_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_2

595587-595694

Orphan

Consensus_repeat	Method
CCGGCTGGTGCGCGCCGCCGCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_2

>merge|CP033325|2|595587-595694|CRISPRCasFinder
CCGGCTGGTGCGCGCCGCCGCCGACGGGGCGAGCGTGCTCGTCGTCTCCGACGCGGGGATGCCGGCGGTGTCCGACCCCGGCTACCGGCTGGTGCGCGCCGCCGTCGA

>CP033325|2|2|595587-595694|CRISPRCasFinder
CCGGCTGGTGCGCGCCGCCGCCGA	CGGGGCGAGCGTGCTCGTCGTCTCCGACGCGGGGATGCCGGCGGTGTCCGACCCCGGCTA
CCGGCTGGTGCGCGCCGCCGTCGA

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Crispr_ID: CP033325_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_3

949322-949423

Orphan

Consensus_repeat	Method
CCGCGGGCCGGGCCCGCCCACGCGTCGGGCGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_3

>merge|CP033325|3|949322-949423|CRISPRCasFinder
CCGCGGGCCGGGCCCGCCCACGCGTCGGGCGGCGCCCCGCCGTCGCCCGTGCGGAACCCGCCCCACGCCGCGGACAGGCGCCCGCCACGCCGCGGCCGGGCC

>CP033325|3|3|949322-949423|CRISPRCasFinder
CCGCGGGCCGGGCCCGCCCACGCGTCGGGCGGCGC	CCCGCCGTCGCCCGTGCGGAACCCGCCCCACG
CCGCGGACAGGCGCCCGCCACGCCGCGGCCGGGCC

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Crispr_ID: CP033325_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_4

1287012-1287088

Orphan

Consensus_repeat	Method
CGGAACTGACGCTGCGGCGTCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_4

>merge|CP033325|4|1287012-1287088|CRISPRCasFinder
CGGAACTGACGCTGCGGCGTCGGGCGCGGCGGCGGACGGCGCGAGCCTCACGCGGAACTGACGCTCCGGCGTCGGGC

>CP033325|4|4|1287012-1287088|CRISPRCasFinder
CGGAACTGACGCTGCGGCGTCGGGC	GCGGCGGCGGACGGCGCGAGCCTCACG
CGGAACTGACGCTCCGGCGTCGGGC

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Crispr_ID: CP033325_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_5

1633006-1633170

Orphan

Consensus_repeat	Method
TGGGCTCCTCNGTCGGCN	CRT

4 spacers

The CRISPR arrays of CP033325_5

>merge|CP033325|5|1633006-1633170|CRT
TGGGCTCCCCGACGGGCGGGGTGGTGGGCTCGCCTGTGGGCTCCTCGGTCGGCGCTTCCGTGGGGGGCTCCTCCGTGGGCTCCTCCGTCGGGGGCTCGGTGGGCTCGCCCGTGGGCTCCTCGGTCGGCTCCTCGCTCGGGGGCTCCGTCGGTTCCTCCGTCGGCA

>CP033325|5|1|1633006-1633170|CRT
TGGGCTCCCCGACGGGCG	GGGTGGTGGGCTCGCCTG
TGGGCTCCTCGGTCGGCG	CTTCCGTGGGGGGCTCCTCCG
TGGGCTCCTCCGTCGGGG	GCTCGGTGGGCTCGCCCG
TGGGCTCCTCGGTCGGCT	CCTCGCTCGGGGGCTCCG
TCGGTTCCTCCGTCGGCA

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Crispr_ID: CP033325_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_6

1728392-1728490

Orphan

Consensus_repeat	Method
CTGGGACTGAGCTCGCGCCGGGGACTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_6

>merge|CP033325|6|1728392-1728490|CRISPRCasFinder
CTGGGGCTGGGGCTGGGCCTGGGACTGAGCTCGCGCCGGGGACTGGGGCCGCGCTGGGGGCCGGGGCACGCGCTGGGACTGAGGTCGCGCCGGGGACTG

>CP033325|6|5|1728392-1728490|CRISPRCasFinder
CTGGGGCTGGGGCTGGGCCTGGGACTG	AGCTCGCGCCGGGGACTGGGGCCGCGCTGGGGGCCGGGGCACGCG
CTGGGACTGAGGTCGCGCCGGGGACTG

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Crispr_ID: CP033325_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_7

1873910-1873986

Orphan

Consensus_repeat	Method
GTGATCATGCAGAAACGCTGGACGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_7

>merge|CP033325|7|1873910-1873986|CRISPRCasFinder
GTGATCATGCAGAAACGCTGGACGCCACCCCTGCCCGCACCCTCCCCCGTCGTGATCATGCAGAAACGCTGGGCGCC

>CP033325|7|6|1873910-1873986|CRISPRCasFinder
GTGATCATGCAGAAACGCTGGACGCC	ACCCCTGCCCGCACCCTCCCCCGTC
GTGATCATGCAGAAACGCTGGGCGCC

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Crispr_ID: CP033325_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_8

2006027-2006127

Orphan

Consensus_repeat	Method
GGCGCCAGCGTTTCTGCATGATCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_8

>merge|CP033325|8|2006027-2006127|CRISPRCasFinder
GGCGCCAGCGTTTCTGCATGATCACCACGGGGTGGCCCGGGGTGGCCCCGGGGTGGGCGGGGGTCGGGCGGCGTCGGGCGTCAGCGTTTCTGCATGATCAC

>CP033325|8|7|2006027-2006127|CRISPRCasFinder
GGCGCCAGCGTTTCTGCATGATCAC	CACGGGGTGGCCCGGGGTGGCCCCGGGGTGGGCGGGGGTCGGGCGGCGTCG
GGCGTCAGCGTTTCTGCATGATCAC

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Crispr_ID: CP033325_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_9

2058659-2058748

Orphan

Consensus_repeat	Method
CCCGACCCCACGCCGACCCCGACGCCCGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_9

>merge|CP033325|9|2058659-2058748|CRISPRCasFinder
CCCGACCCCACGCCGACCCCGACGCCCGACCCGACGCCTTCCCCCGACCCCACACCGACGCCCGACCCGACGCCTTCCCCCGACCCCGCG

>CP033325|9|8|2058659-2058748|CRISPRCasFinder
CCCGACCCCACGCCGACCCCGACGCCCGAC	CCGACGCCTTCCCCCGACCCCACACCGACG
CCCGACCCGACGCCTTCCCCCGACCCCGCG

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Crispr_ID: CP033325_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_10

2439317-2439436

Orphan

Consensus_repeat	Method
GGGCGCCGAGTTCGCCATTCCGTGCCCAGTTCGCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033325_10

>merge|CP033325|10|2439317-2439436|CRISPRCasFinder
GGGCGCCGAGTTCGCCATTCCGTGCCCAGTTCGCCATTCCCGGCTAGCGAACTCGGCATCAACTAGCGAACTCGACGGGAGGACGGGCGCCGAGTTCGCCATTCCGTGCCCAGTTCGCCA

>CP033325|10|9|2439317-2439436|CRISPRCasFinder
GGGCGCCGAGTTCGCCATTCCGTGCCCAGTTCGCCA	TTCCCGGCTAGCGAACTCGGCATCAACTAGCGAACTCGACGGGAGGAC
GGGCGCCGAGTTCGCCATTCCGTGCCCAGTTCGCCA

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Crispr_ID: CP033325_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033325_11

3389988-3390108

Orphan

Consensus_repeat	Method
GTCGTCGGGACGGCCCGGGTGGTCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP033325_11

>merge|CP033325|11|3389988-3390108|CRISPRCasFinder
GACGGACGGCTGGGCCGGGTGGTGGGTGCCATGTCAGTGCTCCTCCTCGGAAAGGACCAGGCGGTCGTCGGGACGGCCCGGGTGGTCGGAACGGTCGTCGTCGGGACGGTCGTCGTCGGAA

>CP033325|11|10|3389988-3390108|CRISPRCasFinder
GACGGACGGCTGGGCCGGGTGGTGG	GTGCCATGTCAGTGCTC
CTCCTCGGAAAGGACCAGGCGGTCG	TCGGGACGGCCCGGGTGGTCGGAACGGTC
GTCGTCGGGACGGTCGTCGTCGGAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	2441630-2441647	1	0.944
CP033325_5	5.1\|1633024\|18\|CP033325\|CRT	1633024-1633041	18	CP033325.1	1201012-1201029	2	0.889
CP033325_5	5.3\|1633099\|18\|CP033325\|CRT	1633099-1633116	18	CP033325.1	1030522-1030539	2	0.889
CP033325_5	5.3\|1633099\|18\|CP033325\|CRT	1633099-1633116	18	CP033325.1	1052677-1052694	2	0.889
CP033325_5	5.3\|1633099\|18\|CP033325\|CRT	1633099-1633116	18	CP033325.1	2865459-2865476	2	0.889
CP033325_5	5.3\|1633099\|18\|CP033325\|CRT	1633099-1633116	18	CP033325.1	2940386-2940403	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	245929-245946	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	287665-287682	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	471184-471201	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	906418-906435	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	1798027-1798044	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	2817429-2817446	2	0.889
CP033325_5	5.4\|1633135\|18\|CP033325\|CRT	1633135-1633152	18	CP033325.1	3060092-3060109	2	0.889

1. spacer 5.4|1633135|18|CP033325|CRT matches to position: 2441630-2441647, mismatch: 1, identity: 0.944

cctcgctcgggggctccg	CRISPR spacer
ccccgctcgggggctccg	Protospacer
**.***************

2. spacer 5.1|1633024|18|CP033325|CRT matches to position: 1201012-1201029, mismatch: 2, identity: 0.889

gggtggtgggctcgcctg	CRISPR spacer
gggtggtgggagcgcctg	Protospacer
**********  ******

3. spacer 5.3|1633099|18|CP033325|CRT matches to position: 1030522-1030539, mismatch: 2, identity: 0.889

gctcggtgggctcgcccg	CRISPR spacer
gctcggtggtctcggccg	Protospacer
********* **** ***

4. spacer 5.3|1633099|18|CP033325|CRT matches to position: 1052677-1052694, mismatch: 2, identity: 0.889

gctcggtgggctcgcccg	CRISPR spacer
gctcgatggggtcgcccg	Protospacer
*****.**** *******

5. spacer 5.3|1633099|18|CP033325|CRT matches to position: 2865459-2865476, mismatch: 2, identity: 0.889

gctcggtgggctcgcccg	CRISPR spacer
gctcggcgagctcgcccg	Protospacer
******.*.*********

6. spacer 5.3|1633099|18|CP033325|CRT matches to position: 2940386-2940403, mismatch: 2, identity: 0.889

gctcggtgggctcgcccg	CRISPR spacer
gctcggtgcgctcgtccg	Protospacer
******** *****.***

7. spacer 5.4|1633135|18|CP033325|CRT matches to position: 245929-245946, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
cctcgctcggctgctccg	Protospacer
**********  ******

8. spacer 5.4|1633135|18|CP033325|CRT matches to position: 287665-287682, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
ccacgctcggggcctccg	Protospacer
** ********* *****

9. spacer 5.4|1633135|18|CP033325|CRT matches to position: 471184-471201, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
cctcgcccgcgggctccg	Protospacer
******.** ********

10. spacer 5.4|1633135|18|CP033325|CRT matches to position: 906418-906435, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
ccgcgcgcgggggctccg	Protospacer
** *** ***********

11. spacer 5.4|1633135|18|CP033325|CRT matches to position: 1798027-1798044, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
cctcgcccgtgggctccg	Protospacer
******.** ********

12. spacer 5.4|1633135|18|CP033325|CRT matches to position: 2817429-2817446, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
cctcgctcgaggactccg	Protospacer
*********.**.*****

13. spacer 5.4|1633135|18|CP033325|CRT matches to position: 3060092-3060109, mismatch: 2, identity: 0.889

cctcgctcgggggctccg	CRISPR spacer
cctcgctcgcgggccccg	Protospacer
********* ****.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP047236	Gordonia sp. JH63 plasmid pJH63-1, complete sequence	93986-94011	2	0.923
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	60938-60963	2	0.923
CP033325_1	1.2\|50974\|23\|CP033325\|CRISPRCasFinder	50974-50996	23	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	353397-353419	2	0.913
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	115197-115222	3	0.885
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP023721	Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence	219896-219921	3	0.885
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	199704-199730	3	0.889
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	79143-79168	4	0.846
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	HQ824666	Edwardsiella phage eiMSLS putative phage tail protein (eiMSLSOrf13) gene, complete cds	671-696	4	0.846
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NC_023555	Edwardsiella phage eiAU-183, complete genome	9778-9803	4	0.846
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NC_042029	Edwardsiella phage eiAU, complete genome	9778-9803	4	0.846
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	32156-32181	4	0.846
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP010860	Marinovum algicola DG 898 plasmid pMaD5, complete sequence	59210-59235	4	0.846
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP054622	Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence	205205-205231	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP039651	Azospirillum sp. TSA2s plasmid p1	180665-180691	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	MK977702	Gordonia terrae phage McKinley, complete genome	54400-54426	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	368272-368298	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	544683-544709	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	52405-52431	4	0.852
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1342455-1342481	4	0.852
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	45058-45083	5	0.808
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	646106-646131	5	0.808
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	891614-891640	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	859931-859957	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	957834-957860	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	461848-461874	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	96824-96850	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	177976-178002	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	891617-891643	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	846401-846427	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	831576-831602	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	428014-428040	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	839806-839832	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	829605-829631	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1498578-1498604	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1091059-1091085	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1618580-1618606	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	852648-852674	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	361178-361204	5	0.815
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	MN329673	Gordonia phage Jabberwocky, complete genome	54890-54916	5	0.815
CP033325_1	1.1\|50923\|26\|CP033325\|CRISPRCasFinder	50923-50948	26	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	46171-46196	6	0.769
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NZ_CP026305	Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence	61995-62026	6	0.812
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	183231-183262	6	0.812
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	108013-108044	6	0.812
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	45309-45340	6	0.812
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NC_005073	Rhodococcus erythropolis linear plasmid pBD2, complete sequence	166328-166359	6	0.812
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	MN335248	Xanthomonas phage XaF13, complete genome	4422-4453	6	0.812
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	577945-577971	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NC_019309	Pseudomonas sp. K-62 plasmid pMR68, complete sequence	7976-8002	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	579838-579864	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1030743-1030769	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	805103-805129	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1184844-1184870	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	754222-754248	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	992346-992372	6	0.778
CP033325_4	4.1\|1287037\|27\|CP033325\|CRISPRCasFinder	1287037-1287063	27	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	638979-639005	6	0.778
CP033325_11	11.2\|3390055\|29\|CP033325\|CRISPRCasFinder	3390055-3390083	29	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	176580-176608	6	0.793
CP033325_11	11.2\|3390055\|29\|CP033325\|CRISPRCasFinder	3390055-3390083	29	NC_025431	Mesorhizobium phagevB_MloP_Lo5R7ANS, complete genome	12448-12476	7	0.759
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4332314-4332345	8	0.75
CP033325_11	11.2\|3390055\|29\|CP033325\|CRISPRCasFinder	3390055-3390083	29	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	852911-852939	8	0.724
CP033325_11	11.2\|3390055\|29\|CP033325\|CRISPRCasFinder	3390055-3390083	29	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	350877-350905	8	0.724
CP033325_11	11.2\|3390055\|29\|CP033325\|CRISPRCasFinder	3390055-3390083	29	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	852431-852459	8	0.724
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	50224-50255	9	0.719
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1592441-1592472	9	0.719
CP033325_3	3.1\|949357\|32\|CP033325\|CRISPRCasFinder	949357-949388	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1185402-1185433	10	0.688

1. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP047236 (Gordonia sp. JH63 plasmid pJH63-1, complete sequence) position: , mismatch: 2, identity: 0.923

ccccaccgacgcgccccccgcgccga	CRISPR spacer
aaccaccgacgcgccccccgcgccga	Protospacer
  ************************

2. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 2, identity: 0.923

ccccaccgacgcgccccccgcgccga	CRISPR spacer
ctccaccgatgcgccccccgcgccga	Protospacer
*.*******.****************

3. spacer 1.2|50974|23|CP033325|CRISPRCasFinder matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 2, identity: 0.913

gccgacggagggtccgaccgagg	CRISPR spacer
gccgacgaagggtccgaccgcgg	Protospacer
*******.************ **

4. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 3, identity: 0.885

ccccaccgacgcgccccccgcgccga	CRISPR spacer
caccgccgacgcgccccccgcgccgg	Protospacer
* **.********************.

5. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP023721 (Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

ccccaccgacgcgccccccgcgccga	CRISPR spacer
ctccaccgacgcgccacccgcgacga	Protospacer
*.************* ****** ***

6. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.889

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
acggtggcggacggcgcgagcttcacg	Protospacer
.***.****************.*****

7. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
acccaccaacgcggcccccgcgccgt	Protospacer
 ******.***** ***********

8. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to HQ824666 (Edwardsiella phage eiMSLS putative phage tail protein (eiMSLSOrf13) gene, complete cds) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
cgtaaccgaggcgccccccgcgccga	Protospacer
* . ***** ****************

9. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NC_023555 (Edwardsiella phage eiAU-183, complete genome) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
cgtaaccgaggcgccccccgcgccga	Protospacer
* . ***** ****************

10. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NC_042029 (Edwardsiella phage eiAU, complete genome) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
cgtaaccgaggcgccccccgcgccga	Protospacer
* . ***** ****************

11. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
cgccaccgacgcccccccggcgccgc	Protospacer
* ********** ***** ******

12. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 4, identity: 0.846

ccccaccgacgcgccccccgcgccga	CRISPR spacer
cgccaccgacgaggcccccgcgccgc	Protospacer
* ********* * ***********

13. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP054622 (Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gtggcggcggacgacgcgtgcctcacc	Protospacer
*.***********.**** *******

14. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP039651 (Azospirillum sp. TSA2s plasmid p1) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gtggcggcggacgacgcgtgcctcacc	Protospacer
*.***********.**** *******

15. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to MK977702 (Gordonia terrae phage McKinley, complete genome) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gtggcggcggacggcgcgaggatcacc	Protospacer
*.******************  ****

16. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggccggcgtgagcctgccg	Protospacer
********** *****.******  **

17. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 4, identity: 0.852

-gcggcggcggacggcgcgagcctcacg	CRISPR spacer
cgcaac-gctgacggcgcgagcctcacg	Protospacer
 **..* ** ******************

18. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcgggcggcgcgagcggcgcg	Protospacer
**********.**********  *.**

19. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 4, identity: 0.852

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcgggcggcgcgagcggcgcg	Protospacer
**********.**********  *.**

20. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 5, identity: 0.808

ccccaccgacgcgccccccgcgccga	CRISPR spacer
gacctccgccgcgccccccgcgccgg	Protospacer
  ** *** ****************.

21. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 5, identity: 0.808

ccccaccgacgcgccccccgcgccga	CRISPR spacer
gacctccgccgcgccccccgcgccgg	Protospacer
  ** *** ****************.

22. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

23. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

24. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

25. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

26. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

27. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

28. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

29. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

30. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

31. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

32. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

33. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

34. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

35. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

36. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

37. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggcgcgatcctgggc	Protospacer
******************* *** .

38. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gatgcggcggatggcgccagcctcact	Protospacer
*  ********.***** ********

39. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to MN329673 (Gordonia phage Jabberwocky, complete genome) position: , mismatch: 5, identity: 0.815

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gtcgcggcggacggcgcgaggatcacc	Protospacer
*. *****************  ****

40. spacer 1.1|50923|26|CP033325|CRISPRCasFinder matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.769

ccccaccgacgcgccccccgcgccga	CRISPR spacer
ccccaccgacgcgcccgccgccagcg	Protospacer
**************** ****    .

41. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NZ_CP026305 (Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence) position: , mismatch: 6, identity: 0.812

-cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
ggacgtcg-cgcccgcgcggaacccgccccccg	Protospacer
   **.** ******.************** **

42. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 6, identity: 0.812

cccgccgtcgcccgtgcggaacccgcc-ccacg	CRISPR spacer
cccgccgtctcccgtgtggaaccaaccatcac-	Protospacer
********* ******.****** .** .***

43. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 6, identity: 0.812

cccgccgtcgcccgtgcggaacccgcc-ccacg	CRISPR spacer
cccgccgtctcccgtgtggaaccaaccatcac-	Protospacer
********* ******.****** .** .***

44. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.812

cccgccgtcgcccgtgcggaacccgcc-ccacg	CRISPR spacer
cccgccgtctcccgtgtggaaccaaccatcac-	Protospacer
********* ******.****** .** .***

45. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NC_005073 (Rhodococcus erythropolis linear plasmid pBD2, complete sequence) position: , mismatch: 6, identity: 0.812

cccgccgtcgcccgtgcggaacccgcc-ccacg	CRISPR spacer
cccgccgtctcccgtgtggaaccaaccatcac-	Protospacer
********* ******.****** .** .***

46. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to MN335248 (Xanthomonas phage XaF13, complete genome) position: , mismatch: 6, identity: 0.812

--cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
ttccaaccg--gcccgtgcggaaccagcaccacg	Protospacer
  ** .***  ************** ** *****

47. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

48. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NC_019309 (Pseudomonas sp. K-62 plasmid pMR68, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
cgaacggaggacggcgtgagcctcacg	Protospacer
  ..*** ********.**********

49. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggtcggcgcgagctatgcc	Protospacer
********** **********. ..*

50. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

51. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

52. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

53. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

54. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
gcggcggcggacggctcgatcctgggc	Protospacer
*************** *** *** .

55. spacer 4.1|1287037|27|CP033325|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 6, identity: 0.778

gcggcggcggacggcgcgagcctcacg	CRISPR spacer
tcggcggcggtcggcgcgagccggtcc	Protospacer
 ********* ***********   *

56. spacer 11.2|3390055|29|CP033325|CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 6, identity: 0.793

tcgggacggcccgggtggtcggaacggtc	CRISPR spacer
tgggaccggcccgggtggtcggatcggca	Protospacer
* **. ***************** ***.

57. spacer 11.2|3390055|29|CP033325|CRISPRCasFinder matches to NC_025431 (Mesorhizobium phagevB_MloP_Lo5R7ANS, complete genome) position: , mismatch: 7, identity: 0.759

tcgggacggcccgggtggtcggaacggtc	CRISPR spacer
agaagacggcccgggtggtcggcaaggac	Protospacer
  ..****************** * ** *

58. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
gccgcgatcgcccgtgcggaacccgactgcgg	Protospacer
 **** .****************** *.   *

59. spacer 11.2|3390055|29|CP033325|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.724

tcgggacggcccgggtggtcggaacggtc	CRISPR spacer
tgtaaccggcccggttggtcggaacggca	Protospacer
*  .. ******** ************.

60. spacer 11.2|3390055|29|CP033325|CRISPRCasFinder matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.724

tcgggacggcccgggtggtcggaacggtc	CRISPR spacer
agacgacggcgctggtggtcggaacggcg	Protospacer
  . ****** * **************.

61. spacer 11.2|3390055|29|CP033325|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.724

tcgggacggcccgggtggtcggaacggtc	CRISPR spacer
tgtaaccggcccggttggtcggaacggca	Protospacer
*  .. ******** ************.

62. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
ctggccgtcgcccgagcggaaccagccttgat	Protospacer
*. *********** ******** ***...

63. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
ctggccgtcgcccgagcggaaccagccttgat	Protospacer
*. *********** ******** ***...

64. spacer 3.1|949357|32|CP033325|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cccgccgtcgcccgtgcggaacccgccccacg	CRISPR spacer
cgtgccgtcgcccgtgctgaagccgctttcga	Protospacer
* .************** *** ****...  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033325

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection