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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033380 Escherichia coli strain L73 plasmid pL73-3, complete sequence 0 crisprs NA 0 0 0 0
CP033379 Escherichia coli strain L73 plasmid pL73-2, complete sequence 0 crisprs RT 0 0 2 0
CP033378 Escherichia coli strain L73 chromosome, complete genome 8 crisprs cas3,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG 0 17 6 0

Results visualization

1. CP033379
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3659 : 143596 128 Escherichia_phage(41.79%) transposase NA
DBSCAN-SWA_2 147593 : 164458 17 Escherichia_phage(56.25%) transposase,plate NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP033378
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_1 1058071-1059075 TypeI-E I-E
16 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_3 1607662-1607779 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_4 2258434-2258557 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_6 3083019-3083102 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_7 3239787-3239931 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_9 3520259-3520355 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_10 3661278-3661422 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033378_12 4040657-4040798 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP033378_5 5.1|2941224|40|CP033378|CRISPRCasFinder 2941224-2941263 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
CP033378_8 8.1|3498472|24|CP033378|PILER-CR 3498472-3498495 24 NC_049946 Escherichia virus Lambda_4A7 genome assembly, chromosome: 1 37652-37675 0 1.0
CP033378_8 8.1|3498472|24|CP033378|PILER-CR 3498472-3498495 24 LR595861 Escherichia virus Lambda_4C10 genome assembly, chromosome: 1 37935-37958 0 1.0
CP033378_8 8.2|3498519|25|CP033378|PILER-CR 3498519-3498543 25 NC_049946 Escherichia virus Lambda_4A7 genome assembly, chromosome: 1 37604-37628 0 1.0
CP033378_8 8.2|3498519|25|CP033378|PILER-CR 3498519-3498543 25 LR595861 Escherichia virus Lambda_4C10 genome assembly, chromosome: 1 37887-37911 0 1.0
CP033378_1 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT 1059015-1059046 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 1 0.969
CP033378_8 8.1|3498472|24|CP033378|PILER-CR 3498472-3498495 24 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 44572-44595 1 0.958
CP033378_8 8.2|3498519|25|CP033378|PILER-CR 3498519-3498543 25 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 44524-44548 1 0.96
CP033378_1 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058466-1058497 32 NC_004313 Salmonella phage ST64B, complete genome 32737-32768 2 0.938
CP033378_1 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058466-1058497 32 KU927493 Salmonella phage 118970_sal3, complete genome 70349-70380 2 0.938
CP033378_1 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058466-1058497 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 32737-32768 2 0.938
CP033378_4 4.1|2258477|38|CP033378|CRISPRCasFinder 2258477-2258514 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_KP763470 Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence 43688-43719 3 0.906
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MW013502 Salmonella virus L cI-40 13-am43, complete genome 23415-23446 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_004348 Enterobacteria phage ST64T, complete genome 6601-6632 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MW013503 Salmonella virus L cII-101, complete genome 23415-23446 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_018275 Salmonella phage vB_SemP_Emek, complete genome 23581-23612 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 AY052766 Salmonella typhimurium bacteriophage ST64T, complete genome 6601-6632 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MF188997 Salmonella phage vB_SalP_PM43, complete genome 6601-6632 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KU927496 Salmonella phage 101962B_sal5, complete genome 5341-5372 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KU927491 Salmonella phage 146851_sal5, complete genome 5341-5372 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KU927495 Salmonella phage 103203_sal4, complete genome 5604-5635 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KU927498 Salmonella phage 64795_sal4, complete genome 24627-24658 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KU927492 Salmonella phage 146851_sal4, complete genome 24638-24669 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_030919 Salmonella phage 118970_sal4, complete genome 5630-5661 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_017985 Salmonella phage SPN9CC, complete genome 5338-5369 4 0.875
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_031946 Salmonella Phage 103203_sal5, complete genome 24748-24779 4 0.875
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 CP031732 Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence 106828-106859 4 0.875
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 MF547662 Clostridioides phage LIBA6276, complete genome 37369-37400 4 0.875
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 MF547663 Clostridioides phage LIBA2945, complete genome 37369-37400 4 0.875
CP033378_8 8.2|3498519|25|CP033378|PILER-CR 3498519-3498543 25 NZ_CP015341 Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence 35661-35685 4 0.84
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 BK000583 TPA_inf: Enterobacteria phage P22 wild type, complete genome 24476-24507 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MN161573 UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome 24476-24507 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 AB426868 Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1 24413-24444 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KR296686 Salmonella phage 22, complete genome 23172-23203 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 L06296 Bacteriophage P22 eaA - eaI genes, complete cds 3165-3196 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_002371 Enterobacteria phage P22 virus, complete genome 24476-24507 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KR296688 Salmonella phage 34, complete genome 33361-33392 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 AF217253 Bacteriophage P22 complete genome 6227-6258 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KR296687 Salmonella phage 25, complete genome 33368-33399 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 AB362338 Enterobacteria phage P22 DNA, complete sequence, strain: MSU 24413-24444 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 GQ422451 Enterobacteria phage Phi75, partial genome 5677-5708 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 GQ422450 Enterobacteria phage UAB_Phi20, complete genome 33836-33867 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 AF527608 Bacteriophage P22-pbi, complete sequence 24476-24507 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MG969415 UNVERIFIED: Salmonella phage GE_vB_TR, complete genome 20314-20345 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 CP053410 Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence 46136-46167 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 CP053320 Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence 25069-25100 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MN855891 Siphoviridae sp. isolate 395, partial genome 5910-5941 5 0.844
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 JQ288021 Salmonella phage SPN3UB, complete genome 39451-39482 5 0.844
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MH370364 Salmonella phage S107, complete genome 29960-29991 5 0.844
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MH370382 Salmonella phage S135, complete genome 29960-29991 5 0.844
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MH370383 Salmonella phage S137, complete genome 29960-29991 5 0.844
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 CP053410 Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence 46320-46351 5 0.844
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 83504-83535 5 0.844
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_028696 Salmonella phage SEN22, complete genome 23477-23508 6 0.812
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP038378 Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence 59750-59781 6 0.812
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP038288 Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence 70107-70138 6 0.812
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MT074430 Salmonella phage pink, complete genome 39866-39897 6 0.812
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NC_022752 Salmonella phage SETP13, complete genome 32823-32854 6 0.812
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 KY176369 Salmonella phage STP03, complete genome 33515-33546 6 0.812
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP017294 Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence 287556-287587 6 0.812
CP033378_1 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058344-1058375 32 NC_017957 Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence 469685-469716 6 0.812
CP033378_1 1.10|1058649|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058649-1058680 32 NZ_AP018520 Sphingobium sp. YG1 plasmid pYGP1, complete sequence 43472-43503 6 0.812
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24789-24826 6 0.842
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24902-24939 6 0.842
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4073-4110 6 0.842
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4072-4109 6 0.842
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4072-4109 6 0.842
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4072-4109 6 0.842
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 KC460990 Serratia phage Eta, complete genome 16840-16871 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 1521372-1521403 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP013108 Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence 114628-114659 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP029453 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence 275858-275889 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP023069 Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence 289246-289277 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP013053 Sinorhizobium americanum CCGM7 plasmid B, complete sequence 250179-250210 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_000914 Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence 32807-32838 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP029233 Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence 296964-296995 7 0.781
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MT774487 Salmonella phage MG40, complete genome 21747-21778 7 0.781
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 JF974294 Aeromonas phage pIS4-A genomic sequence 3122-3153 7 0.781
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NC_021534 Vibrio phage pYD38-A genomic sequence 22142-22173 7 0.781
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP032678 Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence 278005-278036 7 0.781
CP033378_1 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058344-1058375 32 NZ_CP041044 Paracoccus sp. AK26 plasmid pAK2, complete sequence 11965-11996 7 0.781
CP033378_1 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT 1059015-1059046 32 MK455769 Aeromonas phage MJG, complete genome 10369-10400 7 0.781
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 JQ182733 Enterobacterial phage mEp213, complete genome 25492-25523 8 0.75
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 LC487996 Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence 6316-6347 8 0.75
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NC_019706 Enterobacteria phage mEp043 c-1, complete genome 25492-25523 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_KY515226 Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence 63616-63647 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP027613 Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence 89139-89170 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 KY749247 Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence 6605-6636 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NC_047875 Salmonella phage UPF_BP1, complete genome 34431-34462 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP020854 Klebsiella pneumoniae strain KPN528 plasmid pKPN528-1, complete sequence 219120-219151 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP020848 Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence 308963-308994 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP012754 Klebsiella pneumoniae strain KP617 plasmid KP-p1, complete sequence 136398-136429 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP031736 Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence 165927-165958 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP031818 Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence 239058-239089 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP028791 Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence 15259-15290 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP026172 Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence 212209-212240 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP039526 Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence 14232-14263 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP008933 Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence 27946-27977 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP004000 Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence 145037-145068 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP026398 Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence 22241-22272 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP020068 Klebsiella pneumoniae strain AR_0068 plasmid unitig_1, complete sequence 121446-121477 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP028929 Klebsiella pneumoniae strain AR_0153 plasmid unnamed1, complete sequence 29623-29654 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP016921 Klebsiella pneumoniae isolate 11 plasmid pIncHI1B_DHQP1300920, complete sequence 196979-197010 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP034681 Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence 14194-14225 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 CP050156 Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence 98867-98898 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP022612 Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence 328710-328741 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NC_016980 Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence 257026-257057 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP020902 Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence 318754-318785 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_AP018748 Klebsiella pneumoniae strain KP33 plasmid pKP3301, complete sequence 254185-254216 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP024507 Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence 28253-28284 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP032208 Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence 247615-247646 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP006799 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p1, complete sequence 147479-147510 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 MK649825 Klebsiella pneumoniae strain BA813 plasmid pBA813_1, complete sequence 14189-14220 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_MK413723 Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence 117411-117442 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_MK413721 Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence 117046-117077 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_MK191024 Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence 14193-14224 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP014776 Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence 43102-43133 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_MG288682 Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence 14232-14263 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP025462 Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence 56836-56867 8 0.75
CP033378_1 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058161-1058192 32 NZ_CP034406 Klebsiella pneumoniae strain NH34 plasmid pNH34.1, complete sequence 106307-106338 8 0.75
CP033378_1 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058527-1058558 32 KX911187 Rathayibacter phage NCPPB3778, complete genome 23298-23329 8 0.75
CP033378_1 1.9|1058588|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058588-1058619 32 NC_018454 Cronobacter phage phiES15, complete genome 8781-8812 8 0.75
CP033378_1 1.9|1058588|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058588-1058619 32 JQ780327 Cronobacter phage phiES15, complete sequence 8781-8812 8 0.75
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3331-3368 8 0.789
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3330-3367 8 0.789
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3330-3367 8 0.789
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3330-3367 8 0.789
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511042 Pseudomonas phage CF126, partial genome 12668-12699 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511040 Pseudomonas phage CF63, partial genome 59159-59190 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511051 Pseudomonas phage BR181, partial genome 58236-58267 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511041 Pseudomonas phage CF69, partial genome 12696-12727 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511049 Pseudomonas phage BR326, partial genome 58236-58267 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511045 Pseudomonas phage BR208, partial genome 58236-58267 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511044 Pseudomonas phage BR197, partial genome 12696-12727 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511050 Pseudomonas phage BR150, partial genome 12624-12655 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511048 Pseudomonas phage BR320, partial genome 12624-12655 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511046 Pseudomonas phage BR313, partial genome 58236-58267 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511047 Pseudomonas phage BR319, partial genome 12800-12831 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511043 Pseudomonas phage BR228, partial genome 8745-8776 9 0.719
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 MK511039 Pseudomonas phage CF24, partial genome 12696-12727 9 0.719
CP033378_1 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058344-1058375 32 NC_041877 Pseudomonas phage SM1, complete genome 55912-55943 9 0.719
CP033378_1 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058344-1058375 32 JQ067090 UNVERIFIED: Pseudomonas phage PaMx31, partial genome 80025-80056 9 0.719
CP033378_1 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058527-1058558 32 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 1492157-1492188 9 0.719
CP033378_1 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058527-1058558 32 NZ_AP020327 Mycobacterium avium subsp. hominissuis strain JP-H-1 plasmid p1-JPH1 79221-79252 9 0.719
CP033378_1 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058710-1058741 32 NZ_CP009595 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence 298003-298034 9 0.719
CP033378_1 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058710-1058741 32 NZ_CP009606 Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence 164238-164269 9 0.719
CP033378_1 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058710-1058741 32 NZ_CP053994 Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence 238009-238040 9 0.719
CP033378_1 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058710-1058741 32 NZ_CP053992 Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence 221025-221056 9 0.719
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 57083-57114 9 0.719
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 MN693584 Marine virus AFVG_25M163, complete genome 29591-29622 9 0.719
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 258501-258532 9 0.719
CP033378_1 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058893-1058924 32 MK599315 Pseudomonas phage PA1C, complete genome 257887-257918 9 0.719
CP033378_1 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT 1059015-1059046 32 NC_047954 Pseudomonas phage Njord, complete genome 11435-11466 9 0.719
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14114-14151 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51843-51880 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229388-229425 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239882-239919 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230794-230831 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211764-211801 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40383-40420 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313601-313638 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386517-386554 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397090-397127 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404135-404172 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 114998-115035 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40307-40344 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 103-140 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31308-31345 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 8897-8934 9 0.763
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 17901-17938 9 0.763
CP033378_1 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058344-1058375 32 NZ_CP021821 Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence 385935-385966 10 0.688
CP033378_1 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058527-1058558 32 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 1060122-1060153 10 0.688
CP033378_1 1.10|1058649|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058649-1058680 32 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 50199-50230 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 19612-19643 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 115804-115835 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_009981 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence 116173-116204 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 182725-182756 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 110105-110136 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP026790 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence 109122-109153 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP039717 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence 221496-221527 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 KP899804 Salmonella enterica strain F8475 plasmid pF8475, complete sequence 207469-207500 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 KP899805 Salmonella enterica strain 109/9 plasmid p109/9, complete sequence 199664-199695 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP037875 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence 13581-13612 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 73431-73462 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 187798-187829 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029690 Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence 106322-106353 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_003384 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence 148086-148117 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP049354 Escherichia coli strain T28R plasmid pT28R-1, complete sequence 93116-93147 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 AP020333 Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome 185318-185349 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP039559 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence 219648-219679 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP037911 Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence 158306-158337 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP046717 Escherichia coli strain T16R plasmid pT16R-1, complete sequence 93116-93147 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP046007 Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence 167798-167829 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_002305 Salmonella typhi plasmid R27, complete sequence 128806-128837 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP046004 Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence 91681-91712 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP033094 Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence 37794-37825 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 36345-36376 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 124973-125004 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 184389-184420 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP044968 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence 94449-94480 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP044958 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence 26677-26708 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 182833-182864 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 183156-183187 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 183101-183132 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP022495 Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence 197454-197485 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP016184 Escherichia coli strain EC2 plasmid pEC2-4, complete sequence 205427-205458 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP016183 Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence 191663-191694 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 49708-49739 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_013365 Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence 126184-126215 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP041449 Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence 93117-93148 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 181554-181585 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 182609-182640 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 182936-182967 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 182844-182875 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 182670-182701 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 183046-183077 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 182572-182603 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 180358-180389 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 176026-176057 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 130052-130083 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 182677-182708 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 182461-182492 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_LT985296 Escherichia coli strain 1454 plasmid RCS78_p, complete sequence 41577-41608 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_MN101858 Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence 203153-203184 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_MN101856 Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence 109234-109265 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_MH733010 Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence 20553-20584 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 MT219825 Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence 58755-58786 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NZ_MG948335 Escherichia coli strain 3498 plasmid p3498, complete sequence 179219-179250 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_023277 Escherichia coli strain 63743 plasmid pEQ2, complete sequence 194749-194780 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 NC_023289 Escherichia coli strain T23 plasmid pEQ1, complete sequence 146284-146315 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 176467-176498 10 0.688
CP033378_1 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058771-1058802 32 MG874042 Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence 45801-45832 10 0.688
CP033378_1 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT 1059015-1059046 32 NC_047894 Pseudomonas phage uligo, complete genome 11353-11384 10 0.688
CP033378_10 10.1|3661321|59|CP033378|CRISPRCasFinder 3661321-3661379 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56040-56077 10 0.737
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 58275-58312 10 0.737
CP033378_12 12.1|4040709|38|CP033378|CRISPRCasFinder 4040709-4040746 38 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30215-30252 10 0.737
CP033378_1 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT 1058100-1058131 32 NZ_CP024583 Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence 189142-189173 11 0.656
CP033378_10 10.1|3661321|59|CP033378|CRISPRCasFinder 3661321-3661379 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814

1. spacer 5.1|2941224|40|CP033378|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 8.1|3498472|24|CP033378|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0 

cgcctttacctgatttgggtaaac	CRISPR spacer
cgcctttacctgatttgggtaaac	Protospacer
************************

3. spacer 8.1|3498472|24|CP033378|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0 

cgcctttacctgatttgggtaaac	CRISPR spacer
cgcctttacctgatttgggtaaac	Protospacer
************************

4. spacer 8.2|3498519|25|CP033378|PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0 

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttcaggtaaactttat	Protospacer
*************************

5. spacer 8.2|3498519|25|CP033378|PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 0, identity: 1.0 

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttcaggtaaactttat	Protospacer
*************************

6. spacer 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969 

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

7. spacer 8.1|3498472|24|CP033378|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 1, identity: 0.958 

cgcctttacctgatttgggtaaac	CRISPR spacer
tgcctttacctgatttgggtaaac	Protospacer
.***********************

8. spacer 8.2|3498519|25|CP033378|PILER-CR matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 1, identity: 0.96 

tttacctctttcaggtaaactttat	CRISPR spacer
tttacctctttaaggtaaactttat	Protospacer
*********** *************

9. spacer 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 2, identity: 0.938 

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

10. spacer 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 2, identity: 0.938 

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

11. spacer 1.7|1058466|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 2, identity: 0.938 

tgatcacatcatgtttattcgcggtcgtattg	CRISPR spacer
cgatcacatcatgtttatccgcggtcgtattg	Protospacer
.*****************.*************

12. spacer 4.1|2258477|38|CP033378|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

13. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 3, identity: 0.906 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgccgccccgccagcgccggt	Protospacer
 * *************************.***

14. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

15. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

16. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

17. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

18. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

19. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgcagga	Protospacer
 ************************.** **

20. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927496 (Salmonella phage 101962B_sal5, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

21. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927491 (Salmonella phage 146851_sal5, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

22. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927495 (Salmonella phage 103203_sal4, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

23. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927498 (Salmonella phage 64795_sal4, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

24. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KU927492 (Salmonella phage 146851_sal4, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

25. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_030919 (Salmonella phage 118970_sal4, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

26. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_017985 (Salmonella phage SPN9CC, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

27. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_031946 (Salmonella Phage 103203_sal5, complete genome) position: , mismatch: 4, identity: 0.875 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
gttccgctctacgcctccccgccagcgccggt	Protospacer
 * ************ ************.***

28. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.875 

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
ataccagcc--tgccggtagagcctggtgatggt	Protospacer
  * *****  ********* *************

29. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

30. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cttataaaa	Protospacer
*** ******************* .***** *

31. spacer 8.2|3498519|25|CP033378|PILER-CR matches to NZ_CP015341 (Lactobacillus brevis strain 100D8 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84 

tttacctctttcaggtaaactttat	CRISPR spacer
ggtatctcattcaggtaaactttat	Protospacer
  **.*** ****************

32. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

33. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

34. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

35. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

36. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

37. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

38. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

39. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

40. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

41. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

42. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

43. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

44. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ataccgctctacgccgccccgccagtgccaga	Protospacer
 ************************.**..*

45. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MG969415 (UNVERIFIED: Salmonella phage GE_vB_TR, complete genome) position: , mismatch: 5, identity: 0.844 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
attccgctctacgccgcgccgccagcgccggc	Protospacer
 * ************** **********.**.

46. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844 

-ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
attgatg-tctacgccgccccgccagcgccggt	Protospacer
 **. .* *********************.***

47. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844 

-ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
attgatg-tctacgccgccccgccagcgccggt	Protospacer
 **. .* *********************.***

48. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MN855891 (Siphoviridae sp. isolate 395, partial genome) position: , mismatch: 5, identity: 0.844 

ttacc--gctctacgccgccccgccagcgctggt	CRISPR spacer
--accaagctctacgccgccccgcccgcgcaggc	Protospacer
  ***  ****************** **** **.

49. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 5, identity: 0.844 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .

50. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 5, identity: 0.844 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .

51. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 5, identity: 0.844 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .

52. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 5, identity: 0.844 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgatgaaatg	Protospacer
************************.*** .

53. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgccggatgagtgg	Protospacer
********************** *.***  *

54. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844 

tacagtttccataaattcacctcgtttatata-	CRISPR spacer
tactgtttccataaattcacctc-cctataaaa	Protospacer
*** ******************* ..**** *

55. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_028696 (Salmonella phage SEN22, complete genome) position: , mismatch: 6, identity: 0.812 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
atgccggtctacgccgccccgccagcgccaga	Protospacer
 *.*** *********************..*

56. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038378 (Escherichia coli O157:H7 strain F1273 plasmid pF1273-3, complete sequence) position: , mismatch: 6, identity: 0.812 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
acaccgctttacaccgccccgccagcgccagt	Protospacer
 .******.***.***************..**

57. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038288 (Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-2, complete sequence) position: , mismatch: 6, identity: 0.812 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
acaccgctttacaccgccccgccagcgccagt	Protospacer
 .******.***.***************..**

58. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MT074430 (Salmonella phage pink, complete genome) position: , mismatch: 6, identity: 0.812 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .

59. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_022752 (Salmonella phage SETP13, complete genome) position: , mismatch: 6, identity: 0.812 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .

60. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KY176369 (Salmonella phage STP03, complete genome) position: , mismatch: 6, identity: 0.812 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagtgcctgaagaaatg	Protospacer
************************. ** .

61. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017294 (Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812 

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
gtaccggcc--tgccggtagtgcctgatgatcgt	Protospacer
  * *.***  ***************.**** **

62. spacer 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 6, identity: 0.812 

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
gggtgatgcgcggtatcgaccagcaggctgat	Protospacer
 ******************.*****  * * *

63. spacer 1.10|1058649|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812 

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . ****

64. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

65. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

66. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

67. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

68. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

69. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

70. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KC460990 (Serratia phage Eta, complete genome) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
accccgctctacaccgccccgccagcgccagc	Protospacer
 . *********.***************..*.

71. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tgccggatcgacgccgcaccgccagcgctgat	Protospacer
*  * * ** ******* ************.*

72. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013108 (Sinorhizobium americanum strain CFNEI 73 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tgccggatcgacgccgcaccgccagcgctgat	Protospacer
*  * * ** ******* ************.*

73. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tggcggatcgacgccgcaccgccagcgctgat	Protospacer
* .* * ** ******* ************.*

74. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tggcggatcgacgccgcaccgccagcgctgat	Protospacer
* .* * ** ******* ************.*

75. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tgccggatcgacgccgcaccgccagcgctgat	Protospacer
*  * * ** ******* ************.*

76. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tggcggatcgacgccgcaccgccagcgctgat	Protospacer
* .* * ** ******* ************.*

77. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 7, identity: 0.781 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
tggcggatcgacgccgcaccgccagcgctgat	Protospacer
* .* * ** ******* ************.*

78. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 7, identity: 0.781 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cccagccagtgccggtagtgcctgatgaaatg	Protospacer
  **********************.*** .

79. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to JF974294 (Aeromonas phage pIS4-A genomic sequence) position: , mismatch: 7, identity: 0.781 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgccggtagtgccgggtaaatgg	Protospacer
 ********.************ ***.*  *

80. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_021534 (Vibrio phage pYD38-A genomic sequence) position: , mismatch: 7, identity: 0.781 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgccggtagtgccgggtaaatgg	Protospacer
 ********.************ ***.*  *

81. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 7, identity: 0.781 

--agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
attccggcc--tgccggtagagcctggtgattgt	Protospacer
    *.***  ********* ********** **

82. spacer 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041044 (Paracoccus sp. AK26 plasmid pAK2, complete sequence) position: , mismatch: 7, identity: 0.781 

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
aggcgatgcgcggcatcgatcagccgtcggat	Protospacer
 **.*********.**********  .*** *

83. spacer 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781 

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

84. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to JQ182733 (Enterobacterial phage mEp213, complete genome) position: , mismatch: 8, identity: 0.75 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtactctctacaccgccccgccagcgccggc	Protospacer
.   * ******.***************.**.

85. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to LC487996 (Stx2-converting phage Stx2a 981509 genes for Shiga toxin 2 production region, complete sequence) position: , mismatch: 8, identity: 0.75 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
attgaagtctacgccgtcccgccagcgccggt	Protospacer
 *   . *********.***********.***

86. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_019706 (Enterobacteria phage mEp043 c-1, complete genome) position: , mismatch: 8, identity: 0.75 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtactctctacaccgccccgccagcgccggc	Protospacer
.   * ******.***************.**.

87. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagcgccggtagtgcctccagaaaag	Protospacer
*********.*************   ** ..

88. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagcgccagtagtgcctgatagttac	Protospacer
*********.***.**********.*..* ..

89. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KY749247 (Salmonella enterica subsp. enterica serovar Paratyphi B plasmid R1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagccagtgccggtagcgtctgcgaacgca	Protospacer
******************.*.***  .*.*

90. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
agcagtcagcgccggtagtgcctgaggaaatc	Protospacer
*****.***.**************. ** . .

91. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020854 (Klebsiella pneumoniae strain KPN528 plasmid pKPN528-1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

92. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020848 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

93. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012754 (Klebsiella pneumoniae strain KP617 plasmid KP-p1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

94. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031736 (Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

95. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031818 (Klebsiella pneumoniae strain INF235-sc-2280127 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

96. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028791 (Klebsiella pneumoniae strain WCHKP020030 plasmid pOXA1_020030, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

97. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026172 (Klebsiella pneumoniae strain KPNIH50 plasmid pKPN-bbef, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

98. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039526 (Klebsiella pneumoniae subsp. pneumoniae strain HB25-1 plasmid pHB25-1-vir, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

99. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008933 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-NDM, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

100. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004000 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13f, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

101. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026398 (Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

102. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020068 (Klebsiella pneumoniae strain AR_0068 plasmid unitig_1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

103. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028929 (Klebsiella pneumoniae strain AR_0153 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

104. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016921 (Klebsiella pneumoniae isolate 11 plasmid pIncHI1B_DHQP1300920, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

105. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034681 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_296kb, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

106. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to CP050156 (Klebsiella pneumoniae plasmid Carbapenemase(NDM-1)_IncH1B, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

107. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022612 (Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

108. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_016980 (Klebsiella pneumoniae plasmid pNDM-MAR, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

109. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020902 (Klebsiella pneumoniae strain K66-45 plasmid pK66-45-1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

110. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018748 (Klebsiella pneumoniae strain KP33 plasmid pKP3301, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

111. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024507 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

112. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032208 (Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

113. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006799 (Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

114. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK649825 (Klebsiella pneumoniae strain BA813 plasmid pBA813_1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

115. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK413723 (Klebsiella pneumoniae strain 130721005 plasmid p721005-HI3, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

116. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK413721 (Klebsiella pneumoniae strain 130504051 plasmid p504051-HI3, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

117. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK191024 (Klebsiella pneumoniae strain KP17-16 plasmid p17-16-vir, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

118. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014776 (Pluralibacter gergoviae strain FB2 plasmid pFB2.1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

119. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG288682 (Klebsiella aerogenes strain E20 plasmid pE20-HI3, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

120. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025462 (Klebsiella pneumoniae strain F44 plasmid p44-1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

121. spacer 1.2|1058161|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034406 (Klebsiella pneumoniae strain NH34 plasmid pNH34.1, complete sequence) position: , mismatch: 8, identity: 0.75 

agcagccagtgccggtagtgcctggtgatggt	CRISPR spacer
cgcagccagcgcaggtagtgcctgaagaagcc	Protospacer
 ********.** ***********. ** * .

122. spacer 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KX911187 (Rathayibacter phage NCPPB3778, complete genome) position: , mismatch: 8, identity: 0.75 

tactgg--aaaaagctggcgacggtgagcgcagc	CRISPR spacer
--ccgattgataagctggcgacggagaccgcagc	Protospacer
  *.*.  .* ************* ** ******

123. spacer 1.9|1058588|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75 

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

124. spacer 1.9|1058588|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75 

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

125. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

126. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

127. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

128. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

129. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511042 (Pseudomonas phage CF126, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

130. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511040 (Pseudomonas phage CF63, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

131. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511051 (Pseudomonas phage BR181, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

132. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511041 (Pseudomonas phage CF69, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

133. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511049 (Pseudomonas phage BR326, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

134. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511045 (Pseudomonas phage BR208, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

135. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511044 (Pseudomonas phage BR197, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

136. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511050 (Pseudomonas phage BR150, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

137. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511048 (Pseudomonas phage BR320, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

138. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511046 (Pseudomonas phage BR313, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

139. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511047 (Pseudomonas phage BR319, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

140. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511043 (Pseudomonas phage BR228, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

141. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK511039 (Pseudomonas phage CF24, partial genome) position: , mismatch: 9, identity: 0.719 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
cgtccgctctacgccgccccggtagcccagac	Protospacer
.  ****************** .*** * *..

142. spacer 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_041877 (Pseudomonas phage SM1, complete genome) position: , mismatch: 9, identity: 0.719 

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
ccgcaatgcgcggtatcgcgcagcatccttgc	Protospacer
* *..*************  ********   .

143. spacer 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to JQ067090 (UNVERIFIED: Pseudomonas phage PaMx31, partial genome) position: , mismatch: 9, identity: 0.719 

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
ccgcaatgcgcggtatcgcgcagcatccttgc	Protospacer
* *..*************  ********   .

144. spacer 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 9, identity: 0.719 

tactggaaaaagctggcgacggtgagcgcagc	CRISPR spacer
acccagaagaagcgggcgacggtgagcgcgaa	Protospacer
  *..***.**** ***************..

145. spacer 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP020327 (Mycobacterium avium subsp. hominissuis strain JP-H-1 plasmid p1-JPH1) position: , mismatch: 9, identity: 0.719 

tactggaaaaagctggcgacggtgagcgcagc	CRISPR spacer
cccaacaaaaagctggtgacggtgatcgccgg	Protospacer
. * . **********.******** *** *

146. spacer 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

147. spacer 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

148. spacer 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

149. spacer 1.11|1058710|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

150. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatatcacccagcactccggg	Protospacer
  *  ******************** ** .

151. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
ggggatatctataaactcacctcgtttatatt	Protospacer
 . ..* **.*****.***************

152. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

153. spacer 1.14|1058893|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719 

tacagtttccataaattcacctcgtttatata	CRISPR spacer
cgcttcttccatacattcacctcggttatgga	Protospacer
..*  .******* ********** ****. *

154. spacer 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719 

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

155. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

156. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

157. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

158. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

159. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

160. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

161. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

162. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

163. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

164. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

165. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

166. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

167. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

168. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

169. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

170. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

171. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

172. spacer 1.5|1058344|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.688 

cggtgatgcgcggtatcgatcagcatccggct	CRISPR spacer
gcctgatgcgcggtatcgagaagcatgttgac	Protospacer
   ****************  ***** . * .

173. spacer 1.8|1058527|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 10, identity: 0.688 

tactggaaaaagctggcgacggtgagcgcagc	CRISPR spacer
gttccggtgaagccggcgacggtgagcacagc	Protospacer
  .. *. .****.*************.****

174. spacer 1.10|1058649|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

175. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

176. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

177. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

178. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

179. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

180. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

181. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

182. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

183. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

184. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

185. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

186. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

187. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

188. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

189. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

190. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

191. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

192. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

193. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

194. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

195. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

196. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

197. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

198. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

199. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

200. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

201. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

202. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

203. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

204. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

205. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

206. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

207. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

208. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

209. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

210. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

211. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

212. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

213. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

214. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

215. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

216. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

217. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

218. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

219. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

220. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

221. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

222. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

223. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

224. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

225. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

226. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

227. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

228. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

229. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

230. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

231. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

232. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

233. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

234. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

235. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

236. spacer 1.12|1058771|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688 

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

237. spacer 1.16|1059015|32|CP033378|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688 

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

238. spacer 10.1|3661321|59|CP033378|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831 

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

239. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

240. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

241. spacer 12.1|4040709|38|CP033378|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

242. spacer 1.1|1058100|32|CP033378|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656 

ttaccgctctacgccgccccgccagcgctggt	CRISPR spacer
ccgaggctcttcgccgctccgccagcgccatc	Protospacer
...  ***** ******.**********.. .

243. spacer 10.1|3661321|59|CP033378|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814 

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1066439 : 1079622 12 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_2 1441500 : 1487317 66 Enterobacteria_phage(26.32%) holin,transposase,head,lysis NA
DBSCAN-SWA_3 1737161 : 1746603 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_4 2566831 : 2632182 73 Escherichia_phage(46.55%) tail,coat,tRNA,transposase,lysis NA
DBSCAN-SWA_5 3067921 : 3155806 94 Salmonella_phage(59.32%) tail,plate,head,integrase,capsid,tRNA,portal,protease,lysis attL 3060884:3060899|attR 3158377:3158392
DBSCAN-SWA_6 3436527 : 3506900 77 Enterobacteria_phage(61.82%) terminase,tail,head,integrase,capsid,portal,transposase,protease,lysis attL 3458519:3458565|attR 3506914:3506960

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage