CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033439	Pseudomonas aeruginosa strain SP4528 chromosome, complete genome	0 crisprs	RT,WYL,cas3,DEDDh,csa3,DinG,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1513929 : 1522217

Pseudomonas_phage(90.91%)

coat,integrase

attL 1512912:1512937|attR 1523162:1523187

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1512912:1512937	attL	NA	NA	NA	NA
AYR11724.1\|1513929_1514352_-	Arc family DNA-binding protein	G9L6D6	Escherichia_phage	5.8e-08	38.5
AYR11725.1\|1514453_1514669_+	DNA-binding protein	NA	NA	NA	NA
AYR11726.1\|1514699_1514987_+	hypothetical protein	Q56VP7	Pseudomonas_phage	5.2e-53	94.7
AYR11727.1\|1514990_1515368_+	hypothetical protein	Q56VP6	Pseudomonas_phage	1.2e-57	95.2
AYR11728.1\|1515501_1515936_+	DNA-binding protein	Q56VP5	Pseudomonas_phage	3.8e-63	100.0
AYR11729.1\|1515952_1516045_+	hypothetical protein	Q56VP4	Pseudomonas_phage	7.3e-09	100.0
AYR11730.1\|1516057_1516309_+	hypothetical protein	NA	NA	NA	NA
AYR11731.1\|1516321_1516570_+\|coat	phage coat protein B	Q56VP2	Pseudomonas_phage	2.0e-32	91.5
AYR11732.1\|1516723_1518064_+	attachment protein	Q56VP1	Pseudomonas_phage	4.1e-148	84.5
AYR11733.1\|1518068_1518425_+	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	7.9e-59	100.0
AYR11734.1\|1518428_1519712_+	hypothetical protein	Q56VN9	Pseudomonas_phage	1.4e-230	97.6
AYR11735.1\|1519941_1521234_+	hypothetical protein	Q56VN8	Pseudomonas_phage	4.8e-247	94.2
AYR11736.1\|1521233_1522217_+\|integrase	integrase	Q56VN7	Pseudomonas_phage	4.7e-93	52.6
1523162:1523187	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3221668 : 3302375

Acidithiobacillus_phage(50.0%)

integrase,transposase

attL 3229805:3229821|attR 3312252:3312268

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR13222.1\|3221668_3222031_-\|transposase	transposase	NA	NA	NA	NA
AYR13223.1\|3222027_3225042_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.7e-72	24.8
AYR13224.1\|3225133_3225631_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AYR13225.1\|3225658_3226756_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AYR13226.1\|3226938_3228264_+	MFS transporter	NA	NA	NA	NA
AYR13227.1\|3228256_3229216_+	thioesterase	NA	NA	NA	NA
3229805:3229821	attL	NA	NA	NA	NA
AYR13228.1\|3230397_3231648_+	outer membrane porin, OprD family	NA	NA	NA	NA
AYR13229.1\|3231833_3233156_+	MFS transporter	NA	NA	NA	NA
AYR13230.1\|3233186_3234362_+	L-rhamnonate dehydratase	Q6A202	Oenococcus_phage	1.1e-37	29.4
AYR13231.1\|3234389_3235385_+	FAH family protein	NA	NA	NA	NA
AYR13232.1\|3237756_3238377_+	paraquat-inducible membrane protein A	NA	NA	NA	NA
AYR13233.1\|3238369_3240673_+	MCE family protein	NA	NA	NA	NA
AYR13234.1\|3240731_3241235_+	transcriptional regulator	NA	NA	NA	NA
AYR13235.1\|3241300_3243253_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AYR13236.1\|3244500_3244857_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AYR13237.1\|3244907_3246080_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AYR13238.1\|3246125_3246845_+	SDR family oxidoreductase	NA	NA	NA	NA
AYR13239.1\|3248633_3248957_+	DUF485 domain-containing protein	NA	NA	NA	NA
AYR13240.1\|3248953_3250612_+	cation acetate symporter	NA	NA	NA	NA
AYR13241.1\|3250675_3250828_-	amino acid permease	NA	NA	NA	NA
AYR16432.1\|3250890_3251811_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYR13242.1\|3251899_3253153_-	aspartate aminotransferase family protein	NA	NA	NA	NA
AYR13243.1\|3253198_3254623_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
AYR13244.1\|3254701_3256033_-	APC family permease	NA	NA	NA	NA
AYR13245.1\|3256045_3257203_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AYR13246.1\|3257437_3258313_-	alpha/beta hydrolase	NA	NA	NA	NA
AYR13247.1\|3258309_3259836_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AYR13248.1\|3260201_3260783_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYR13249.1\|3261262_3262150_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
AYR13250.1\|3262211_3263579_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AYR13251.1\|3264597_3266097_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AYR13252.1\|3267583_3268249_+	transmembrane anchor protein	NA	NA	NA	NA
AYR16433.1\|3268515_3270735_-	DEAD/DEAH box helicase	NA	NA	NA	NA
AYR13253.1\|3270709_3272005_-	ATP-binding protein	NA	NA	NA	NA
AYR13254.1\|3272001_3274488_-	Tellurite resistance protein TerB	NA	NA	NA	NA
AYR13255.1\|3274858_3277474_-	hypothetical protein	NA	NA	NA	NA
AYR13256.1\|3278084_3278363_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYR16434.1\|3278635_3278881_+	hypothetical protein	NA	NA	NA	NA
AYR13257.1\|3278892_3279468_+	hypothetical protein	NA	NA	NA	NA
AYR13258.1\|3279492_3279885_+	DUF2384 domain-containing protein	NA	NA	NA	NA
AYR13259.1\|3279952_3280717_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	7.7e-59	47.9
AYR13260.1\|3280719_3282468_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	2.8e-88	36.1
AYR13261.1\|3282509_3282794_-	hypothetical protein	NA	NA	NA	NA
AYR13262.1\|3283369_3283813_+	hypothetical protein	NA	NA	NA	NA
AYR13263.1\|3284002_3284623_+	hypothetical protein	NA	NA	NA	NA
AYR13264.1\|3285178_3286603_+	DUF1329 domain-containing protein	NA	NA	NA	NA
AYR13265.1\|3286686_3288273_+	DUF1302 domain-containing protein	NA	NA	NA	NA
AYR13266.1\|3288281_3290684_+	RND family transporter	NA	NA	NA	NA
AYR13267.1\|3290694_3291657_+	glycosyl hydrolase	NA	NA	NA	NA
AYR13268.1\|3291741_3292608_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
AYR13269.1\|3292901_3294101_+	PucR family transcriptional regulator	NA	NA	NA	NA
AYR13270.1\|3294123_3294666_-	hypothetical protein	NA	NA	NA	NA
AYR13271.1\|3296228_3296804_-	hypothetical protein	NA	NA	NA	NA
AYR13272.1\|3297032_3297542_-	hypothetical protein	NA	NA	NA	NA
AYR13273.1\|3297726_3297972_+	hypothetical protein	NA	NA	NA	NA
AYR13274.1\|3299607_3300831_+\|integrase	integrase	NA	NA	NA	NA
AYR13275.1\|3300830_3302375_+\|integrase	site-specific integrase	NA	NA	NA	NA
3312252:3312268	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3825678 : 3832572

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR13648.1\|3825678_3826347_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1
AYR13649.1\|3826457_3826853_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	7.7e-47	71.3
AYR13650.1\|3826849_3827209_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
AYR13651.1\|3827208_3827514_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
AYR13652.1\|3827510_3827846_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
AYR13653.1\|3827842_3828826_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.2e-141	74.0
AYR13654.1\|3828913_3829888_+	glutathione S-transferase family protein	NA	NA	NA	NA
AYR13655.1\|3829892_3831290_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AYR13656.1\|3831291_3832572_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4

DBSCAN-SWA_4

5071024 : 5080053

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR14737.1\|5071024_5072065_-	DNA recombination/repair protein RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
AYR14738.1\|5072198_5072705_-	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
AYR14739.1\|5072852_5073860_+	TolB-like translocation protein	NA	NA	NA	NA
AYR14740.1\|5073841_5074006_-	TolB-like translocation protein	NA	NA	NA	NA
AYR14741.1\|5073985_5076553_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
AYR14742.1\|5076619_5076943_+	Ferredoxin 1	NA	NA	NA	NA
AYR14743.1\|5077369_5078374_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
AYR14744.1\|5078478_5079372_-	LysM peptidoglycan-binding domain-containing protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
AYR16488.1\|5079417_5080053_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3

DBSCAN-SWA_5

5797832 : 5881098

Pseudomonas_phage(23.53%)

holin,tRNA,plate,integrase,tail

attL 5876028:5876044|attR 5884823:5884839

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR15364.1\|5797832_5799032_-\|tRNA	Tyrosine--tRNA ligase 2	NA	NA	NA	NA
AYR16507.1\|5799316_5800660_+	peptidase M23	O03937	Lactobacillus_phage	3.0e-18	44.1
AYR15365.1\|5800662_5801754_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
AYR15366.1\|5801807_5802158_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
AYR15367.1\|5802235_5802658_-	polymer-forming cytoskeletal family protein	NA	NA	NA	NA
AYR15368.1\|5802658_5803378_-	hypothetical protein	NA	NA	NA	NA
AYR15369.1\|5803377_5804412_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AYR15370.1\|5804702_5805125_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
AYR15371.1\|5805141_5806110_+	nitronate monooxygenase	NA	NA	NA	NA
AYR15372.1\|5806231_5807308_+	DUF805 domain-containing protein	NA	NA	NA	NA
AYR15373.1\|5807368_5808169_+	SDR family oxidoreductase	NA	NA	NA	NA
AYR15374.1\|5808208_5809690_-	AAA family ATPase	U5XJW0	Phormidium_phage	3.9e-67	33.8
AYR15375.1\|5809768_5810107_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
AYR15376.1\|5810206_5810854_+	2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	NA	NA	NA	NA
AYR15377.1\|5810908_5811703_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
AYR15378.1\|5812022_5812445_-	OsmC family protein	NA	NA	NA	NA
AYR15379.1\|5812716_5813361_+	cyclic AMP receptor-like protein	NA	NA	NA	NA
AYR15380.1\|5813422_5814259_-	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9
AYR15381.1\|5814255_5815305_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
AYR15382.1\|5815306_5815912_-	glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	3.5e-75	66.3
AYR15383.1\|5816259_5816517_-	hypothetical protein	A0A125RNP3	Pseudomonas_phage	6.4e-18	64.6
AYR15384.1\|5816513_5816876_-	hypothetical protein	H2BDA0	Pseudomonas_phage	4.2e-15	47.9
AYR15385.1\|5816872_5817502_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.6e-86	78.0
AYR15386.1\|5817534_5818524_-	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.2e-106	55.8
AYR15387.1\|5818581_5818788_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
AYR15388.1\|5818762_5819635_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
AYR15389.1\|5819644_5821882_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
AYR15390.1\|5822051_5822396_-\|tail	phage tail assembly protein	NA	NA	NA	NA
AYR15391.1\|5822410_5822914_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
AYR15392.1\|5822926_5824087_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	5.0e-187	83.2
AYR15393.1\|5824129_5824570_-\|tail	phage tail protein	NA	NA	NA	NA
AYR15394.1\|5824578_5826687_-\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	6.5e-225	52.3
AYR15395.1\|5826688_5827222_-\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
AYR15396.1\|5827214_5828102_-	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
AYR15397.1\|5828098_5828425_-\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
AYR15398.1\|5828577_5829135_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.6e-45	71.1
AYR15399.1\|5829131_5829647_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-32	43.4
AYR15400.1\|5829668_5830118_-\|holin	holin	B5TK61	Pseudomonas_phage	5.0e-26	53.3
AYR15401.1\|5830481_5830841_-	hypothetical protein	NA	NA	NA	NA
AYR15402.1\|5830888_5831089_-	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
AYR15403.1\|5831546_5832317_+	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	7.9e-72	59.0
AYR15404.1\|5832416_5832731_+	transcription regulatory protein PrtN	NA	NA	NA	NA
AYR15405.1\|5832917_5834396_-	anthranilate synthase component I	NA	NA	NA	NA
AYR15406.1\|5834468_5835287_-	phosphoglycolate phosphatase	NA	NA	NA	NA
AYR15407.1\|5835286_5835961_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AYR15408.1\|5836084_5836915_-	ABC transporter permease	NA	NA	NA	NA
AYR15409.1\|5837020_5838268_-	ABC transporter permease	NA	NA	NA	NA
AYR15410.1\|5838382_5839429_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYR15411.1\|5839484_5840594_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
AYR15412.1\|5840827_5841862_-	extracellular solute-binding protein	NA	NA	NA	NA
AYR15413.1\|5841990_5842623_-	DNA-binding response regulator	NA	NA	NA	NA
AYR15414.1\|5842668_5845062_-	PAS domain S-box protein	NA	NA	NA	NA
AYR15415.1\|5845213_5846275_+	DUF3530 family protein	NA	NA	NA	NA
AYR15416.1\|5846275_5847034_-	molecular chaperone DjlA	NA	NA	NA	NA
AYR15417.1\|5847035_5847710_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AYR15418.1\|5847706_5848723_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AYR15419.1\|5849595_5849808_-	hypothetical protein	NA	NA	NA	NA
AYR15420.1\|5849995_5851708_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.0e-282	82.1
AYR15421.1\|5851840_5854642_+	LPS-assembly protein LptD	NA	NA	NA	NA
AYR15422.1\|5854622_5855915_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AYR15423.1\|5855911_5856898_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
AYR15424.1\|5857013_5857820_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA
AYR15425.1\|5857856_5858237_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AYR15426.1\|5858236_5859088_+	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
AYR15427.1\|5859131_5859464_+	thiosulfate sulfurtransferase	NA	NA	NA	NA
AYR15428.1\|5859742_5861665_+	PrkA family serine protein kinase	NA	NA	NA	NA
AYR15429.1\|5861765_5863037_+	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
AYR15430.1\|5863033_5864587_+	SpoVR family protein	NA	NA	NA	NA
AYR15431.1\|5864680_5865187_+	DUF4136 domain-containing protein	NA	NA	NA	NA
AYR15432.1\|5865230_5866463_+\|tRNA	multifunctional tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/2'phosphatase	A0A076G5T8	Escherichia_phage	2.6e-77	43.1
AYR15433.1\|5866435_5866978_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AYR15434.1\|5866968_5867322_-	dihydroneopterin aldolase	NA	NA	NA	NA
AYR15435.1\|5867405_5867975_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
AYR15436.1\|5868053_5869079_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.7e-109	58.1
AYR15437.1\|5869279_5869495_+	30S ribosomal protein S21	NA	NA	NA	NA
AYR15438.1\|5869564_5870014_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	5.0e-18	38.8
AYR15439.1\|5870096_5872091_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.8e-73	40.7
AYR15440.1\|5872170_5874024_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.2e-36	33.8
AYR15441.1\|5874130_5877868_+	bifunctional diguanylate cyclase/phosphodiesterase	A0A127AWB9	Bacillus_phage	4.8e-13	35.4
5876028:5876044	attL	NA	NA	NA	NA
AYR15442.1\|5878948_5880634_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	0.0e+00	100.0
AYR15443.1\|5880936_5881098_+\|integrase	integrase	NA	NA	NA	NA
5884823:5884839	attR	NA	NA	NA	NA

DBSCAN-SWA_6

6513215 : 6570998

Erysipelothrix_phage(16.67%)

transposase,integrase

attL 6515460:6515476|attR 6573714:6573730

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR16012.1\|6513215_6514373_+\|integrase	site-specific integrase	NA	NA	NA	NA
AYR16013.1\|6514383_6516000_+	hypothetical protein	NA	NA	NA	NA
6515460:6515476	attL	NA	NA	NA	NA
AYR16014.1\|6516751_6517834_+\|integrase	site-specific integrase	NA	NA	NA	NA
AYR16015.1\|6517905_6518259_+	TetR family transcriptional regulator	NA	NA	NA	NA
AYR16016.1\|6518497_6518680_+	hypothetical protein	NA	NA	NA	NA
AYR16017.1\|6518822_6519233_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AYR16018.1\|6519304_6519655_+	mercuric ion transporter MerT	NA	NA	NA	NA
AYR16019.1\|6519668_6519944_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AYR16020.1\|6519956_6520391_+	mercury transporter MerC	NA	NA	NA	NA
AYR16021.1\|6520423_6522106_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.3e-36	26.4
AYR16022.1\|6522124_6522541_+	hypothetical protein	NA	NA	NA	NA
AYR16023.1\|6524320_6524563_-	hypothetical protein	NA	NA	NA	NA
AYR16024.1\|6524700_6524982_-	hypothetical protein	NA	NA	NA	NA
AYR16025.1\|6525321_6525555_-	hypothetical protein	NA	NA	NA	NA
AYR16527.1\|6526009_6526612_-	hypothetical protein	NA	NA	NA	NA
AYR16026.1\|6526626_6526890_-	hypothetical protein	NA	NA	NA	NA
AYR16027.1\|6527044_6528445_-	diguanylate cyclase	I4AZM6	Saccharomonospora_phage	8.6e-40	31.4
AYR16028.1\|6528441_6529032_-	hypothetical protein	NA	NA	NA	NA
AYR16029.1\|6529134_6529356_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYR16030.1\|6529386_6532575_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
AYR16031.1\|6532575_6533937_-	restriction endonuclease subunit S	NA	NA	NA	NA
AYR16032.1\|6533933_6535910_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	1.6e-31	24.9
AYR16528.1\|6536137_6537004_-\|integrase	site-specific integrase	NA	NA	NA	NA
AYR16033.1\|6538767_6540870_-\|integrase	site-specific integrase	NA	NA	NA	NA
AYR16034.1\|6543267_6543531_-	radical SAM protein	NA	NA	NA	NA
AYR16035.1\|6543619_6543895_-	YheV family putative metal-binding protein	NA	NA	NA	NA
AYR16036.1\|6543891_6545937_-	oligopeptidase A	A0A1V0SD92	Indivirus	4.6e-34	21.3
AYR16037.1\|6546014_6546557_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AYR16038.1\|6546549_6547215_+	HAD family hydrolase	NA	NA	NA	NA
AYR16039.1\|6547247_6548231_+	hypothetical protein	NA	NA	NA	NA
AYR16529.1\|6548238_6549366_-	aminopeptidase	NA	NA	NA	NA
AYR16040.1\|6549457_6549874_+	hypothetical protein	NA	NA	NA	NA
AYR16041.1\|6549930_6550368_+	hypothetical protein	NA	NA	NA	NA
AYR16042.1\|6550379_6550613_-	DUF1161 domain-containing protein	NA	NA	NA	NA
AYR16043.1\|6550723_6551179_-	OsmC family peroxiredoxin	NA	NA	NA	NA
AYR16044.1\|6552030_6552918_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AYR16045.1\|6553025_6553946_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYR16046.1\|6554011_6554518_+	DUF1993 family protein	NA	NA	NA	NA
AYR16047.1\|6554556_6555105_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	8.0e-34	41.6
AYR16048.1\|6555312_6555741_+	cupin domain-containing protein	NA	NA	NA	NA
AYR16049.1\|6555793_6557626_-	asparagine synthase (glutamine-hydrolyzing)	G9E4W0	Ostreococcus_lucimarinus_virus	4.7e-22	23.7
AYR16050.1\|6558442_6558583_-	hypothetical protein	NA	NA	NA	NA
AYR16051.1\|6559346_6560855_+	hypothetical protein	NA	NA	NA	NA
AYR16052.1\|6561136_6561520_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYR16053.1\|6561534_6562200_-	hypothetical protein	NA	NA	NA	NA
AYR16054.1\|6562196_6562550_-	DUF4810 domain-containing protein	NA	NA	NA	NA
AYR16055.1\|6562580_6563267_-	curli production assembly protein CsgG	NA	NA	NA	NA
AYR16056.1\|6563762_6565136_-	exoenzyme T	NA	NA	NA	NA
AYR16057.1\|6565299_6566709_+	DUF4010 domain-containing protein	NA	NA	NA	NA
AYR16058.1\|6566705_6566960_+	hypothetical protein	NA	NA	NA	NA
AYR16059.1\|6566973_6567369_-	hypothetical protein	NA	NA	NA	NA
AYR16060.1\|6567467_6567746_-\|transposase	transposase	NA	NA	NA	NA
AYR16061.1\|6568325_6568514_-	hypothetical protein	NA	NA	NA	NA
AYR16062.1\|6569534_6570047_-	hypothetical protein	NA	NA	NA	NA
AYR16063.1\|6570296_6570998_-\|transposase	transposase	NA	NA	NA	NA
6573714:6573730	attR	NA	NA	NA	NA

DBSCAN-SWA_7

6647530 : 6707460

Salmonella_phage(23.08%)

transposase,tRNA,integrase

attL 6660218:6660232|attR 6705345:6705359

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR16121.1\|6647530_6648898_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
AYR16122.1\|6649081_6650272_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.5e-72	42.0
AYR16123.1\|6650439_6650757_+	MarR family transcriptional regulator	NA	NA	NA	NA
AYR16124.1\|6650885_6652442_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	6.5e-105	43.4
AYR16125.1\|6653764_6654907_+	anticodon nuclease	NA	NA	NA	NA
AYR16126.1\|6654899_6658001_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
AYR16127.1\|6658071_6659115_+	cell filamentation protein Fic	Q9JMN3	Wolbachia_phage	6.7e-90	51.8
AYR16128.1\|6659118_6659982_-\|integrase	integrase	NA	NA	NA	NA
6660218:6660232	attL	NA	NA	NA	NA
AYR16129.1\|6660564_6661731_-	hypothetical protein	NA	NA	NA	NA
AYR16130.1\|6661963_6662317_-	hypothetical protein	NA	NA	NA	NA
AYR16131.1\|6662470_6662854_+	hypothetical protein	NA	NA	NA	NA
AYR16132.1\|6663087_6663375_-	hypothetical protein	NA	NA	NA	NA
AYR16133.1\|6663327_6665220_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AYR16134.1\|6665219_6665864_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
AYR16135.1\|6665882_6666671_+	ParA family protein	Q8JL10	Natrialba_phage	3.8e-21	35.5
AYR16136.1\|6666680_6667553_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.6e-12	30.7
AYR16137.1\|6667716_6668097_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
AYR16138.1\|6668113_6668983_+	ATP synthase subunit A	NA	NA	NA	NA
AYR16139.1\|6669032_6669290_+	ATP synthase subunit C	NA	NA	NA	NA
AYR16140.1\|6669347_6669818_+	ATP synthase subunit B	NA	NA	NA	NA
AYR16141.1\|6669829_6670366_+	ATP synthase subunit delta	NA	NA	NA	NA
AYR16142.1\|6670384_6671929_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
AYR16143.1\|6671979_6672840_+	ATP synthase subunit gamma	NA	NA	NA	NA
AYR16144.1\|6672870_6674247_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
AYR16145.1\|6674288_6674714_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
AYR16146.1\|6674834_6676199_+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	A0A0N7G7I9	Chrysochromulina_ericina_virus	2.4e-31	35.0
AYR16147.1\|6676788_6677562_+	DeoR family transcriptional regulator	NA	NA	NA	NA
AYR16148.1\|6677577_6679413_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	3.6e-131	42.6
AYR16149.1\|6679476_6680682_-	MFS transporter	NA	NA	NA	NA
AYR16150.1\|6681035_6681659_-	HAD-IB family hydrolase	NA	NA	NA	NA
AYR16151.1\|6681896_6683081_+	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	3.6e-39	33.2
AYR16152.1\|6683244_6684204_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
AYR16153.1\|6684278_6686303_+	TRAP transporter permease	NA	NA	NA	NA
AYR16154.1\|6686299_6686698_+	DUF1850 domain-containing protein	NA	NA	NA	NA
AYR16155.1\|6686784_6688029_+	class C beta-lactamase-related serine hydrolase	NA	NA	NA	NA
AYR16156.1\|6688073_6689411_-	dihydroorotase	NA	NA	NA	NA
AYR16157.1\|6689413_6689974_-	carbonate dehydratase	NA	NA	NA	NA
AYR16158.1\|6689970_6690795_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
AYR16159.1\|6690965_6692159_+	AMIN domain-containing protein	A0A067ZJB6	Vibrio_phage	1.8e-14	31.6
AYR16160.1\|6692409_6695376_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	98.9
AYR16161.1\|6695379_6695940_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.9e-59	99.2
AYR16162.1\|6696366_6697380_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AYR16163.1\|6697526_6697985_+	aminoglycoside N-acetyltransferase AAC(6')-Il	NA	NA	NA	NA
AYR16534.1\|6698116_6698650_+	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA
AYR16164.1\|6698708_6699167_+	aminoglycoside N-acetyltransferase AAC(6')-Il	NA	NA	NA	NA
AYR16165.1\|6699391_6699628_+	trimethoprim-resistant dihydrofolate reductase DfrB2	A0A0H5ARK7	Pseudomonas_phage	1.9e-13	50.7
AYR16166.1\|6699854_6700655_+	oxacillin-hydrolyzing class D beta-lactamase OXA-10	NA	NA	NA	NA
AYR16535.1\|6700671_6701463_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AYR16167.1\|6701743_6702787_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AYR16168.1\|6703008_6703356_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AYR16169.1\|6703349_6704189_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
AYR16170.1\|6704118_6704298_-	hypothetical protein	NA	NA	NA	NA
AYR16171.1\|6704316_6704817_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYR16172.1\|6704785_6705778_-\|transposase	transposase	NA	NA	NA	NA
6705345:6705359	attR	NA	NA	NA	NA
AYR16173.1\|6705780_6707460_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

6715226 : 6758483

Escherichia_phage(50.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYR16181.1\|6715226_6716768_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AYR16182.1\|6717323_6717962_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
AYR16183.1\|6717966_6718332_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
AYR16184.1\|6719347_6720112_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AYR16185.1\|6720400_6720640_+	methionine repressor-like protein	NA	NA	NA	NA
AYR16186.1\|6720639_6721050_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
AYR16187.1\|6721053_6724047_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	5.7e-259	47.6
AYR16188.1\|6724059_6724272_-	hypothetical protein	NA	NA	NA	NA
AYR16189.1\|6724279_6724555_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AYR16190.1\|6724567_6724918_-	mercury transporter MerT	NA	NA	NA	NA
AYR16191.1\|6724992_6725391_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
AYR16192.1\|6725401_6725584_+	hypothetical protein	NA	NA	NA	NA
AYR16193.1\|6725799_6726720_-	cation transporter	NA	NA	NA	NA
AYR16194.1\|6729303_6731016_-	hypothetical protein	NA	NA	NA	NA
AYR16195.1\|6732646_6733561_-	type VI secretion-associated lipoprotein TagQ	NA	NA	NA	NA
AYR16196.1\|6733622_6735335_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA
AYR16197.1\|6735327_6736527_-	ABC transporter permease	NA	NA	NA	NA
AYR16198.1\|6740348_6741077_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
AYR16199.1\|6741086_6741767_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
AYR16200.1\|6741763_6745294_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AYR16201.1\|6745290_6746640_-	DotU family type VI secretion system protein	NA	NA	NA	NA
AYR16202.1\|6746646_6747981_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYR16203.1\|6747996_6748461_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYR16204.1\|6748505_6750011_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AYR16205.1\|6750378_6751413_+	type VI secretion system protein TssA	NA	NA	NA	NA
AYR16206.1\|6751501_6752020_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYR16207.1\|6752032_6753529_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYR16208.1\|6753604_6754093_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AYR16209.1\|6754260_6755106_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AYR16210.1\|6755107_6755617_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYR16211.1\|6755613_6757473_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYR16212.1\|6757436_6758483_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage