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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033440 Leptospira borgpetersenii serovar Hardjo-bovis strain L49 chromosome 1, complete sequence 1 crisprs WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,csa3,DinG,Cas9_archaeal 0 1 8 0
CP033441 Leptospira borgpetersenii serovar Hardjo-bovis strain L49 chromosome 2, complete sequence 0 crisprs csa3 0 0 1 0

Results visualization

1. CP033440
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033440_1 2033956-2034030 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP033440_1 1.1|2033979|29|CP033440|CRISPRCasFinder 2033979-2034007 29 NZ_CP014852 Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence 43605-43633 8 0.724
CP033440_1 1.1|2033979|29|CP033440|CRISPRCasFinder 2033979-2034007 29 NC_018487 Bacillus thuringiensis HD-771 plasmid p03, complete sequence 38173-38201 8 0.724

1. spacer 1.1|2033979|29|CP033440|CRISPRCasFinder matches to NZ_CP014852 (Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence) position: , mismatch: 8, identity: 0.724

tcaacacgttagttgaaaaatagagcgaa	CRISPR spacer
acaacacgttagttgaagaatacggttct	Protospacer
 ****************.**** .*.   

2. spacer 1.1|2033979|29|CP033440|CRISPRCasFinder matches to NC_018487 (Bacillus thuringiensis HD-771 plasmid p03, complete sequence) position: , mismatch: 8, identity: 0.724

tcaacacgttagttgaaaaatagagcgaa	CRISPR spacer
acaacacgttagttgaagaatacggttct	Protospacer
 ****************.**** .*.   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 19143 : 85742 52 Lake_Baikal_phage(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_2 396639 : 455003 45 Prochlorococcus_phage(25.0%) transposase NA
DBSCAN-SWA_3 512686 : 563492 44 Heterosigma_akashiwo_virus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_4 964074 : 1020879 47 Bacillus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_5 1645504 : 1729000 48 Faustovirus(11.11%) transposase NA
DBSCAN-SWA_6 2230440 : 2292314 57 Wolbachia_phage(40.0%) transposase,tRNA NA
DBSCAN-SWA_7 2548770 : 2623178 60 uncultured_Mediterranean_phage(18.18%) protease,transposase,tRNA NA
DBSCAN-SWA_8 3129834 : 3172333 30 Shigella_phage(33.33%) transposase,portal NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP033441
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 59304 : 142882 60 uncultured_Caudovirales_phage(14.29%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage