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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033465 Clostridium sp. JN-1 chromosome, complete genome 3 crisprs NA 0 26 0 0

Results visualization

1. CP033465
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033465_1 1381622-1389598 Orphan III-B
121 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033465_2 2149121-2150655 Orphan III-B
23 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP033465_3 2465029-2465117 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP033465_1 1.41|1384276|34|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384276-1384309 34 NZ_CP046125 Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence 68614-68647 6 0.824
CP033465_1 1.2|1381718|34|CP033465|PILER-CR,CRISPRCasFinder,CRT 1381718-1381751 34 MK554696 Fusobacterium phage Fnu1, complete genome 70218-70251 7 0.794
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NC_031121 Bacillus phage Aurora, complete genome 696-731 7 0.806
CP033465_1 1.89|1387429|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387429-1387464 36 NZ_CP033938 Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence 7445-7480 7 0.806
CP033465_2 2.13|2149940|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 2149940-2149974 35 NZ_CP013848 Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence 20247-20281 7 0.8
CP033465_2 2.19|2150331|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150331-2150366 36 MT774401 CrAssphage cr6_1, complete genome 53659-53694 7 0.806
CP033465_2 2.19|2150331|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150331-2150366 36 MT774401 CrAssphage cr6_1, complete genome 59684-59719 7 0.806
CP033465_3 3.1|2465058|31|CP033465|CRISPRCasFinder 2465058-2465088 31 AP014217 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C88-MedDCM-OCT-S36-C169, *** SEQUENCING IN PROGRESS *** 4083-4113 7 0.774
CP033465_3 3.1|2465058|31|CP033465|CRISPRCasFinder 2465058-2465088 31 MH636380 Cylindrospermopsis raciborskii virus RM-2018a isolate CrV-01T, complete genome 22758-22788 7 0.774
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 MN698242 Pelagibacter phage HTVC103P, complete genome 24725-24760 8 0.778
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 MT074137 Bacteroides phage DAC16, complete genome 2315-2349 8 0.771
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 MT074142 Bacteroides phage DAC23, complete genome 2315-2349 8 0.771
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 MT074139 Bacteroides phage DAC19, complete genome 2339-2373 8 0.771
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 MT074140 Bacteroides phage DAC20, complete genome 2339-2373 8 0.771
CP033465_1 1.86|1387232|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387232-1387267 36 KX467643 Sulfolobus islandicus filamentous virus 2, complete genome 35616-35651 8 0.778
CP033465_1 1.95|1387824|34|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387824-1387857 34 NC_014031 Bacillus megaterium QM B1551 plasmid pBM600, complete sequence 52335-52368 8 0.765
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NC_015257 Tetragenococcus halophilus plasmid pHDC-I DNA, complete sequence 20552-20586 8 0.771
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NC_024991 Tetragenococcus halophilus plasmid pTDC-B DNA, complete sequence, strain: TyrB 1009-1043 8 0.771
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NC_024990 Tetragenococcus halophilus plasmid pTDC-A DNA, complete sequence, strain: TyrA 1009-1043 8 0.771
CP033465_1 1.121|1389534|35|CP033465|CRISPRCasFinder 1389534-1389568 35 AP014206 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C77-MedDCM-OCT-S39-C66, *** SEQUENCING IN PROGRESS *** 21756-21790 8 0.771
CP033465_2 2.23|2150591|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150591-2150625 35 NC_021623 Borrelia hermsii strain HS1 plasmid lp174, complete sequence 60259-60293 8 0.771
CP033465_2 2.23|2150591|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150591-2150625 35 NZ_CP014350 Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence 64930-64964 8 0.771
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NZ_CP043832 Bacillus sp. BS98 plasmid unnamed2 45418-45453 9 0.75
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 NZ_AP017296 Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence 83022-83056 9 0.743
CP033465_1 1.55|1385196|34|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385196-1385229 34 NZ_CP040614 Campylobacter sp. CFSAN093246 plasmid unnamed, complete sequence 26222-26255 9 0.735
CP033465_1 1.100|1388150|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388150-1388185 36 MN693375 Marine virus AFVG_25M113, complete genome 16001-16036 9 0.75
CP033465_1 1.103|1388348|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388348-1388383 36 LN681539 Clostridium phage phiCD505, complete genome 40253-40288 9 0.75
CP033465_2 2.6|2149478|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2149478-2149513 36 MT708547 Klebsiella phage Muenster, complete genome 37450-37485 9 0.75
CP033465_2 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150397-2150432 36 NZ_CP013709 Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence 137983-138018 9 0.75
CP033465_2 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150397-2150432 36 NZ_CP013682 Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence 141060-141095 9 0.75
CP033465_2 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150397-2150432 36 NZ_CP013295 Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence 151776-151811 9 0.75
CP033465_2 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 2150397-2150432 36 NZ_CP013844 Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence 183420-183455 9 0.75
CP033465_1 1.22|1383032|35|CP033465|PILER-CR,CRISPRCasFinder,CRT 1383032-1383066 35 NZ_CP026602 Clostridiaceae bacterium 14S0207 plasmid unnamed2, complete sequence 12505-12539 10 0.714
CP033465_1 1.41|1384276|34|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384276-1384309 34 NC_006870 Bacillus mycoides pDx14.2 plasmid 10162-10195 10 0.706
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 32307-32341 10 0.714
CP033465_1 1.56|1385260|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385260-1385294 35 MK250029 Prevotella phage Lak-C1, complete genome 17401-17435 10 0.714
CP033465_1 1.56|1385260|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385260-1385294 35 MK250016 Prevotella phage Lak-A1, complete genome 43679-43713 10 0.714
CP033465_1 1.64|1385785|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385785-1385820 36 KC595516 Brevibacillus phage Emery, complete genome 40362-40397 10 0.722
CP033465_1 1.86|1387232|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387232-1387267 36 NZ_CP026601 Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence 10621-10656 10 0.722
CP033465_1 1.93|1387694|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387694-1387729 36 KY549443 Enterococcus phage EFP01, complete genome 109804-109839 10 0.722
CP033465_1 1.95|1387824|34|CP033465|CRISPRCasFinder,CRT,PILER-CR 1387824-1387857 34 NZ_CP053846 Campylobacter sp. CCUG 57310 plasmid pCORI-1, complete sequence 10648-10681 10 0.706
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NZ_CP032533 Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence 66343-66377 10 0.714
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NZ_CP032534 Bacillus megaterium NCT-2 plasmid pNCT2_6, complete sequence 40078-40112 10 0.714
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NZ_CP032535 Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence 17387-17421 10 0.714
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NZ_CP009921 Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence 277522-277556 10 0.714
CP033465_1 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1388020-1388054 35 NZ_CP035095 Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence 199415-199449 10 0.714
CP033465_1 1.118|1389335|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1389335-1389370 36 MN693450 Marine virus AFVG_25M486, complete genome 38004-38039 10 0.722
CP033465_1 1.118|1389335|36|CP033465|CRISPRCasFinder,CRT,PILER-CR 1389335-1389370 36 MN693107 Marine virus AFVG_25M445, complete genome 14771-14806 10 0.722
CP033465_2 2.1|2149151|35|CP033465|CRISPRCasFinder,CRT 2149151-2149185 35 NZ_CP045561 Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence 15814-15848 10 0.714
CP033465_2 2.1|2149151|35|CP033465|CRISPRCasFinder,CRT 2149151-2149185 35 NZ_CP014478 Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence 14870-14904 10 0.714
CP033465_1 1.35|1383883|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1383883-1383917 35 AP014104 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S23-C43, *** SEQUENCING IN PROGRESS *** 3917-3951 11 0.686
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 NZ_CP037748 Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence 30671-30705 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 35858-35892 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 MT080590 UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome 116972-117006 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 KX532239 Staphylococcus phage StAP1, complete genome 24667-24701 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 MT080587 UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome 44916-44950 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 AP019522 Staphylococcal phage MR003 DNA, complete genome 47562-47596 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 NC_022090 Staphylococcus phage vB_SauM_Remus, complete genome 12372-12406 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 MT080588 UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome 21139-21173 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 MT080595 UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome 5048-5082 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 NC_020877 Staphylococcus phage vB_SauM_Romulus, complete genome 12372-12406 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 JX194239 Staphylococcus phage SA11, complete genome 111565-111599 11 0.686
CP033465_1 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1385983-1386017 35 MT080584 UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome 18895-18929 11 0.686
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NZ_CP011154 Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence 392651-392686 12 0.667
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NZ_CP044979 Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence 425171-425206 12 0.667
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NZ_CP044980 Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence 54870-54905 12 0.667
CP033465_1 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT 1382111-1382146 36 NZ_CP011152 Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence 154229-154264 12 0.667
CP033465_1 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR 1384340-1384374 35 MH356730 Staphylococcus phage VB-SauS-SA2, complete genome 87350-87384 12 0.657

1. spacer 1.41|1384276|34|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.824

taatatataaattttactttatat-ccaacacttg	CRISPR spacer
taatatataaattataatttatatgcccattctt-	Protospacer
************* ** ******* ** *. *** 

2. spacer 1.2|1381718|34|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 7, identity: 0.794

-ttattaacaataatatttattgtaccttcatttt	CRISPR spacer
attatt-ctaatattatttattgtactttcattac	Protospacer
 *****  .**** ************.****** .

3. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NC_031121 (Bacillus phage Aurora, complete genome) position: , mismatch: 7, identity: 0.806

---taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
acaagattt---aaaaaaatatgaattttacagaaataa	Protospacer
    .****   ** ***************.********

4. spacer 1.89|1387429|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033938 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-1, complete sequence) position: , mismatch: 7, identity: 0.806

atagataat--attttattttttaaatcaatcactttt	CRISPR spacer
--tgatcataaattttatttttaaaataaatcactttg	Protospacer
   *** **  *********** **** ********* 

5. spacer 2.13|2149940|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013848 (Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence) position: , mismatch: 7, identity: 0.8

attacaacctctacaactatccagtttggattttc	CRISPR spacer
ataactgtttctaaaactatccagttaggattttc	Protospacer
** ** ...**** ************ ********

6. spacer 2.19|2150331|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT774401 (CrAssphage cr6_1, complete genome) position: , mismatch: 7, identity: 0.806

tgaagaaaaagcatattggttaggttt--tgtttggtg	CRISPR spacer
agaagaaaaagcttattggctaggttttctatttgc--	Protospacer
 *********** ******.*******  *.****   

7. spacer 2.19|2150331|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT774401 (CrAssphage cr6_1, complete genome) position: , mismatch: 7, identity: 0.806

tgaagaaaaagcatattggttagg--ttttgtttggtg	CRISPR spacer
agaagagaaagcttattggttaggttttttatttgc--	Protospacer
 *****.***** ***********  ****.****   

8. spacer 3.1|2465058|31|CP033465|CRISPRCasFinder matches to AP014217 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C88-MedDCM-OCT-S36-C169, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.774

tcacaaagcacaactacttctgcaatggtta	CRISPR spacer
atatatataacaactacttctggaatggtta	Protospacer
 .*.* *  ************* ********

9. spacer 3.1|2465058|31|CP033465|CRISPRCasFinder matches to MH636380 (Cylindrospermopsis raciborskii virus RM-2018a isolate CrV-01T, complete genome) position: , mismatch: 7, identity: 0.774

tcacaaagcacaactacttctgcaatggtta	CRISPR spacer
taccaaagaacacctacttctgcaatatcta	Protospacer
*  ***** *** *************. .**

10. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to MN698242 (Pelagibacter phage HTVC103P, complete genome) position: , mismatch: 8, identity: 0.778

taatttt--acaataaaatatgaattttatagaaataa	CRISPR spacer
--gttctaaacaagaaaatatgaattttatacaaaaag	Protospacer
  .**.*  **** ***************** *** *.

11. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 8, identity: 0.771

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
aagtagcatttgataaaatgaataataaattatct	Protospacer
* ***.   .*********.********* *****

12. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 8, identity: 0.771

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
aagtagcatttgataaaatgaataataaattatct	Protospacer
* ***.   .*********.********* *****

13. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 8, identity: 0.771

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
aagtagcatttgataaaatgaataataaattatct	Protospacer
* ***.   .*********.********* *****

14. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 8, identity: 0.771

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
aagtagcatttgataaaatgaataataaattatct	Protospacer
* ***.   .*********.********* *****

15. spacer 1.86|1387232|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to KX467643 (Sulfolobus islandicus filamentous virus 2, complete genome) position: , mismatch: 8, identity: 0.778

ggatatttttctcttgctttgttaagaaattcattt	CRISPR spacer
ccattatattctcttgctgtgttaagagattcatct	Protospacer
  **  * ********** ********.******.*

16. spacer 1.95|1387824|34|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_014031 (Bacillus megaterium QM B1551 plasmid pBM600, complete sequence) position: , mismatch: 8, identity: 0.765

atattttctattaagattaaaagctttttcaatt	CRISPR spacer
ctattctcttttaagattaaaagctatcttatta	Protospacer
 ****.*** *************** *.*.* * 

17. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_015257 (Tetragenococcus halophilus plasmid pHDC-I DNA, complete sequence) position: , mismatch: 8, identity: 0.771

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
gtcgcaggtgtcctttctttacaacataaaaaagt	Protospacer
.*.*.*... ************** **********

18. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_024991 (Tetragenococcus halophilus plasmid pTDC-B DNA, complete sequence, strain: TyrB) position: , mismatch: 8, identity: 0.771

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
gtcgcaggtgtcctttctttacaacataaaaaagt	Protospacer
.*.*.*... ************** **********

19. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_024990 (Tetragenococcus halophilus plasmid pTDC-A DNA, complete sequence, strain: TyrA) position: , mismatch: 8, identity: 0.771

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
gtcgcaggtgtcctttctttacaacataaaaaagt	Protospacer
.*.*.*... ************** **********

20. spacer 1.121|1389534|35|CP033465|CRISPRCasFinder matches to AP014206 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C77-MedDCM-OCT-S39-C66, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.771

atatacaatgaagtagctaatgtagctagagagat	CRISPR spacer
agatttaatgaagtagctaatgtagcacgagaagg	Protospacer
* ** .********************  ****.. 

21. spacer 2.23|2150591|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 8, identity: 0.771

tattatgtagtattaaatactacatcttgtaacat	CRISPR spacer
tattatatagtattaactactacataataaataat	Protospacer
******.********* ********  *. *  **

22. spacer 2.23|2150591|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.771

tattatgtagtattaaatactacatcttgtaacat	CRISPR spacer
tattatatagtattaactactacataataaataat	Protospacer
******.********* ********  *. *  **

23. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043832 (Bacillus sp. BS98 plasmid unnamed2) position: , mismatch: 9, identity: 0.75

taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
gtaatttactataaaatatgaattatataggcacat	Protospacer
  * ***** ************** *****. *.* 

24. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 9, identity: 0.743

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
gtataaatactgaaaaaataattaataactcaaat	Protospacer
.*.********** ******* ******  .*  *

25. spacer 1.55|1385196|34|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040614 (Campylobacter sp. CFSAN093246 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

tagtgttataggatataatactactaataataat	CRISPR spacer
cagtgttataggttataattctactttcacaaaa	Protospacer
.*********** ****** *****  .*  ** 

26. spacer 1.100|1388150|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MN693375 (Marine virus AFVG_25M113, complete genome) position: , mismatch: 9, identity: 0.75

tcatagatattttcatctaatccttttagttgttca	CRISPR spacer
atctttaaattttcatctaattcttttagtttttga	Protospacer
 . *  * *************.********* ** *

27. spacer 1.103|1388348|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 9, identity: 0.75

aattcgaaaagtgttgatatattcatagatactagg	CRISPR spacer
attgaaaaaattgttgatatattcatacatacagga	Protospacer
* *  .**** **************** **** .*.

28. spacer 2.6|2149478|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 9, identity: 0.75

aacttctattaattaactcattacaatattcttcac	CRISPR spacer
actttctattatgtaactcattacaatattccgtta	Protospacer
* .********  ******************. .  

29. spacer 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 9, identity: 0.75

gttaaagaaagtaatattaaaacaaatggttaatta	CRISPR spacer
gttaaagaaaataatatttaaacaaaacgtaatacc	Protospacer
**********.******* *******  ** *  . 

30. spacer 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 9, identity: 0.75

gttaaagaaagtaatattaaaacaaatggttaatta	CRISPR spacer
gttaaagaaaataatatttaaacaaaacgtaatacc	Protospacer
**********.******* *******  ** *  . 

31. spacer 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 9, identity: 0.75

gttaaagaaagtaatattaaaacaaatggttaatta	CRISPR spacer
gttaaagaaaataatatttaaacaaaacgtaatacc	Protospacer
**********.******* *******  ** *  . 

32. spacer 2.20|2150397|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 9, identity: 0.75

gttaaagaaagtaatattaaaacaaatggttaatta	CRISPR spacer
gttaaagaaaataatatttaaacaaaacgtaatacc	Protospacer
**********.******* *******  ** *  . 

33. spacer 1.22|1383032|35|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026602 (Clostridiaceae bacterium 14S0207 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

gataaagtttctaatgcattattaatcttttctaa	CRISPR spacer
ttacctgtttctattgcatttttaatcttttcttg	Protospacer
      ******* ****** ************ .

34. spacer 1.41|1384276|34|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_006870 (Bacillus mycoides pDx14.2 plasmid) position: , mismatch: 10, identity: 0.706

taatatataaattttactttatatccaacacttg	CRISPR spacer
taatatatatattttacttaatattatgattttc	Protospacer
********* ********* ****.  .  .** 

35. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.714

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
aaataaataataataaaataaataataattgaggg	Protospacer
* .****** *.****************   *   

36. spacer 1.56|1385260|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 10, identity: 0.714

tatgttattacctcttatttattttatatatttat	CRISPR spacer
ataaagattacatcttatttattatatatatgttt	Protospacer
   .  ***** *********** ******* * *

37. spacer 1.56|1385260|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 10, identity: 0.714

tatgttattacctcttatttattttatatatttat	CRISPR spacer
ataaagattacatcttatttattatatatatgttt	Protospacer
   .  ***** *********** ******* * *

38. spacer 1.64|1385785|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to KC595516 (Brevibacillus phage Emery, complete genome) position: , mismatch: 10, identity: 0.722

ttttgtttattgtatttatctaagtcatctatatta	CRISPR spacer
cgctgttcaatgtatttatctaagtcatcaaagatc	Protospacer
. .****.* ******************* * . * 

39. spacer 1.86|1387232|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

ggatatttttctcttgctttgttaagaaattcattt	CRISPR spacer
gcgtatttttcttttgctttattaagaaaaaatgta	Protospacer
* .*********.*******.********     * 

40. spacer 1.93|1387694|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to KY549443 (Enterococcus phage EFP01, complete genome) position: , mismatch: 10, identity: 0.722

tccttgattctgaatatatctctctattgtttcttt	CRISPR spacer
cccttgattctgaatatatttctttatgacgccgat	Protospacer
.******************.***.*** .. .*  *

41. spacer 1.95|1387824|34|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053846 (Campylobacter sp. CCUG 57310 plasmid pCORI-1, complete sequence) position: , mismatch: 10, identity: 0.706

atattttctattaagattaaaagctttttcaatt	CRISPR spacer
aacattgctattaagattaaaaactttttaggca	Protospacer
*   ** ***************.****** ... 

42. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 10, identity: 0.714

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
ttttgtttccttctttcttttcaaaataaaaaacc	Protospacer
 **     ***.******** ************ .

43. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032534 (Bacillus megaterium NCT-2 plasmid pNCT2_6, complete sequence) position: , mismatch: 10, identity: 0.714

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
ttttgtttccttctttcttttcaaaataaaaaacc	Protospacer
 **     ***.******** ************ .

44. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032535 (Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence) position: , mismatch: 10, identity: 0.714

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
ttttgtttccttctttcttttcaaaataaaaaacc	Protospacer
 **     ***.******** ************ .

45. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 10, identity: 0.714

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
ttttgtttccttctttcttttcaaaataaaaaacc	Protospacer
 **     ***.******** ************ .

46. spacer 1.98|1388020|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

attgtaaacctcctttctttacaaaataaaaaagt	CRISPR spacer
ttttgtttccttctttcttttcaaaataaaaaacc	Protospacer
 **     ***.******** ************ .

47. spacer 1.118|1389335|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MN693450 (Marine virus AFVG_25M486, complete genome) position: , mismatch: 10, identity: 0.722

aagttgatcctaaagaacttatggatagttactatt	CRISPR spacer
cagttgatgataaagaacttatggataaatctttcc	Protospacer
 *******  *****************. * .* ..

48. spacer 1.118|1389335|36|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MN693107 (Marine virus AFVG_25M445, complete genome) position: , mismatch: 10, identity: 0.722

aagttgatcctaaagaacttatggatagttactatt	CRISPR spacer
cagttgatgataaagaacttatggataaatctttcc	Protospacer
 *******  *****************. * .* ..

49. spacer 2.1|2149151|35|CP033465|CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 10, identity: 0.714

ccctcaaatgatttaacaaaatccacacattgttt	CRISPR spacer
ggctcaaatgaaataacaaaatccacaactcccgt	Protospacer
  *********  **************  *. . *

50. spacer 2.1|2149151|35|CP033465|CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 10, identity: 0.714

ccctcaaatgatttaacaaaatccacacattgttt	CRISPR spacer
ggctcaaatgaaataacaaaatccacaactcccgt	Protospacer
  *********  **************  *. . *

51. spacer 1.35|1383883|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to AP014104 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S23-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.686

tggtaaatttgataaatacttatatggtgctatat	CRISPR spacer
tttatcatttgataaatatttatatggagctggtg	Protospacer
*     ************.******** ***.   

52. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037748 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.686

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
ttaaaaatactaatcaaataaataataaaaaggag	Protospacer
 *. *******.** **************. .   

53. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aagttctttataactctttaatcatcttttgtcaa	Protospacer
    *.*********.************.**   .

54. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

55. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

56. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

57. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

58. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

59. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

60. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

61. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

62. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

63. spacer 1.67|1385983|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 11, identity: 0.686

tttatttttataactttttaatcatcttctggacg	CRISPR spacer
aacatttttataacattttcatcatctttccatag	Protospacer
  .*********** **** ********.. .  *

64. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 12, identity: 0.667

taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
agattttacaataaaatataaatttaatcagttcgc	Protospacer
 .*****************.***** ** ..  .. 

65. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 12, identity: 0.667

taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
agattttacaataaaatataaatttaatcagttcgc	Protospacer
 .*****************.***** ** ..  .. 

66. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044980 (Bacillus thuringiensis strain BT62 plasmid pBT62B, complete sequence) position: , mismatch: 12, identity: 0.667

taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
agattttacaataaaatataaatttaatcagttcgc	Protospacer
 .*****************.***** ** ..  .. 

67. spacer 1.8|1382111|36|CP033465|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 12, identity: 0.667

taattttacaataaaatatgaattttatagaaataa	CRISPR spacer
agattttacaataaaatataaatttaatcagttcgc	Protospacer
 .*****************.***** ** ..  .. 

68. spacer 1.42|1384340|35|CP033465|CRISPRCasFinder,CRT,PILER-CR matches to MH356730 (Staphylococcus phage VB-SauS-SA2, complete genome) position: , mismatch: 12, identity: 0.657

atgtaaatactgataaaataaataataaagtatct	CRISPR spacer
cctaccatactaataaaatacataataaagtcatg	Protospacer
 .    *****.******** **********  . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage