CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033631	Klebsiella sp. P1CD1 chromosome, complete genome	3 crisprs	csa3,cas3,DEDDh,DinG,cas3HD,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033631_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033631_1

2506323-2506533

Orphan

I-E,II-B

Consensus_repeat	Method
GTCTTCCCCACATGCGTGGGGGTGTTTC	CRISPRCasFinder

3 spacers

The CRISPR arrays of CP033631_1

>merge|CP033631|1|2506323-2506533|CRISPRCasFinder
GTCTTCCCCACATGCGTGGGGGTGTTTCCTGCAGCGGGACATCATTTAGCGTGATGACATCGTCTTCCCCACATGCGTGGGGGTGTTTCTGTTAAGCATGGTTTTGTCAGAGTATATGGACTGTCTTCCCCACGTGTGTGGGGGTGTGTCTAAAAAAGAAAAACTCTCCGGTTCCCTGTTCGGGTCTTCACCACACGTGTGGGGCCTGTTT

>CP033631|1|1|2506323-2506533|CRISPRCasFinder
GTCTTCCCCACATGCGTGGGGGTGTTTC	CTGCAGCGGGACATCATTTAGCGTGATGACATC
GTCTTCCCCACATGCGTGGGGGTGTTTC	TGTTAAGCATGGTTTTGTCAGAGTATATGGACT
GTCTTCCCCACGTGTGTGGGGGTGTGTC	TAAAAAAGAAAAACTCTCCGGTTCCCTGTTCGG
GTCTTCACCACACGTGTGGGGCCTGTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP033631.1\|AYW19396.1\|2514210_2514441_+\|heme-exporter-protein-CcmD	unknown	unknown	gnl\|CDD\|225656
CP033631.1\|AYW19385.1\|2498295_2500446_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
CP033631.1\|AYW22288.1\|2510726_2512064_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
CP033631.1\|AYW19380.1\|2490348_2491389_+\|porin	unknown	unknown	gnl\|CDD\|182275
CP033631.1\|AYW19391.1\|2508173_2508926_+\|gluconate-2-dehydrogenase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|379295
CP033631.1\|AYW19397.1\|2514424_2514883_+\|cytochrome-c-maturation-protein-CcmE	unknown	unknown	gnl\|CDD\|183874
CP033631.1\|AYW19395.1\|2513476_2514214_+\|heme-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|273492
CP033631.1\|AYW19389.1\|2506554_2507238_+\|DUF4926-domain-containing-protein	unknown	unknown	gnl\|CDD\|379816
CP033631.1\|AYW19384.1\|2497095_2498253_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349916
CP033631.1\|AYW19390.1\|2507298_2507670_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
CP033631.1\|AYW19382.1\|2495349_2495574_-\|hypothetical-protein	unknown	unknown	unknown
CP033631.1\|AYW19393.1\|2512147_2512771_+\|cytochrome-c-biogenesis-heme-transporting-ATPase-CcmA	unknown	unknown	gnl\|CDD\|184125
CP033631.1\|AYW19386.1\|2502074_2503163_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224753
CP033631.1\|AYW19388.1\|2504999_2506070_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
CP033631.1\|AYW19392.1\|2508928_2510713_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
CP033631.1\|AYW19383.1\|2495599_2496799_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
CP033631.1\|AYW19394.1\|2512767_2513427_+\|heme-exporter-protein-CcmB	unknown	unknown	gnl\|CDD\|200083
CP033631.1\|AYW19381.1\|2491798_2495182_+\|molybdopterin-oxidoreductase	unknown	unknown	gnl\|CDD\|239160
CP033631.1\|AYW19387.1\|2503237_2505007_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
CP033631.1\|AYW19379.1\|2489401_2490244_+\|N-acetylmuramoyl-L-alanine-amidase-AmiA	unknown	unknown	gnl\|CDD\|182376

Protein	Function_ID	Function_description	E-value
CP033631.1\|AYW19396.1\|2514210_2514441_+\|heme-exporter-protein-CcmD	gnl\|CDD\|225656	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion].	3.66666e-17
CP033631.1\|AYW19385.1\|2498295_2500446_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
CP033631.1\|AYW22288.1\|2510726_2512064_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	4.61661e-12
CP033631.1\|AYW19380.1\|2490348_2491389_+\|porin	gnl\|CDD\|182275	PRK10159, PRK10159, phosphoporin PhoE.	1.21734e-52
CP033631.1\|AYW19393.1\|2512147_2512771_+\|cytochrome-c-biogenesis-heme-transporting-ATPase-CcmA	gnl\|CDD\|184125	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA.	5.16534e-106
CP033631.1\|AYW19397.1\|2514424_2514883_+\|cytochrome-c-maturation-protein-CcmE	gnl\|CDD\|183874	PRK13165, PRK13165, cytochrome c maturation protein CcmE.	1.25348e-82
CP033631.1\|AYW19395.1\|2513476_2514214_+\|heme-ABC-transporter-permease	gnl\|CDD\|273492	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC. This model describes the cyt c biogenesis protein encoded by ccmC in bacteria. It must be noted an arabidopsis, a tritcum and a piscum plant proteins were recognizable in the clade. Quite likely they are of organellar origin. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes, ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in the heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Other].	2.97119e-86
CP033631.1\|AYW19389.1\|2506554_2507238_+\|DUF4926-domain-containing-protein	gnl\|CDD\|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	2.23675e-17
CP033631.1\|AYW19384.1\|2497095_2498253_+\|amidohydrolase	gnl\|CDD\|349916	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
CP033631.1\|AYW19390.1\|2507298_2507670_-\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.55891e-41
CP033631.1\|AYW19391.1\|2508173_2508926_+\|gluconate-2-dehydrogenase-subunit-3-family-protein	gnl\|CDD\|379295	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3. This family corresponds to subunit 3 of the Gluconate 2-dehydrogenase enzyme that catalyzes the conversion of gluconate to 2-dehydro-D-gluconate EC:1.1.99.3.	4.0099e-39
CP033631.1\|AYW19386.1\|2502074_2503163_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|224753	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism].	7.00319e-48
CP033631.1\|AYW19388.1\|2504999_2506070_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.26026e-143
CP033631.1\|AYW19392.1\|2508928_2510713_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	4.91814e-80
CP033631.1\|AYW19383.1\|2495599_2496799_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.59233e-58
CP033631.1\|AYW19394.1\|2512767_2513427_+\|heme-exporter-protein-CcmB	gnl\|CDD\|200083	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB. This model describes the cyt c biogenesis protein encoded by ccmB in bacteria. Bacterial c-type cytochromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome C. [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Other].	7.32836e-72
CP033631.1\|AYW19381.1\|2491798_2495182_+\|molybdopterin-oxidoreductase	gnl\|CDD\|239160	cd02759, MopB_Acetylene-hydratase, The MopB_Acetylene-hydratase CD contains acetylene hydratase (Ahy) and other related proteins. The acetylene hydratase of Pelobacter acetylenicus is a tungsten iron-sulfur protein involved in the fermentation of acetylene to ethanol and acetate. Members of this CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	1.45536e-153
CP033631.1\|AYW19387.1\|2503237_2505007_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	3.69883e-102
CP033631.1\|AYW19379.1\|2489401_2490244_+\|N-acetylmuramoyl-L-alanine-amidase-AmiA	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	5.59788e-139

>CP033631.1|AYW19388.1|2504999_2506070_+|ABC-transporter-ATP-binding-protein
MIELSVENLHLTYGDNPVLKGVSMTLGRGEVVSLLGPSGSGKTTLLRAVAGLEKPTSGRIAIGNRTVYDGTPRSEIPAEERNLGLVFQSYALWPHKTVFHNVAYPLKLRKVAAGEIKERVQRVLDQLGLGHLGNRHPHQLSGGQQQRVAIGRALVYNPPVILLDEPLSNLDAKLREEARVFLRELIIKLGLSALMVTHDQNEAMAISDRILLLNNGVIEQQGTPQEMYGSPATLFAAEFMGSNNRLHGKVTALENGRARVEGASWTLWGRAGEGVSVGQPATAVIRVERLRLDGAAQDNSLQLPLLTSMYLGDRWEYLFRTEGDDFPLRAYGTALRDAEHCHLTLPAEDVWIFPQR
>CP033631.1|AYW19387.1|2503237_2505007_+|iron-ABC-transporter-permease
MNVLLRKWQGLPRGVVVCITALVIYVPLLFIVVQSFLSAPFFSRSKSWSLEAFAFIFTDPDFYLALRSGFILAFGLVIIAIPLGGILAFLMVRTDLPGRRIIEPLILVPIFVSPMVLGFGYVVAAGPVGFFSQWAQQLIGFVPWNIYSMFSIVVIAGLTHVPHAYLYISSALRSVGSDVEEAARTVGATPLQVMTSVSLPMVRPSILYACVLLFFLGLEVFGLMLVLGDPEGNMVLATYLYKLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRRLMRTANRFVTMKGKASQARALPLGKWRWVAGAVVVAWLTVTIGVPLLGVALRAFISNWGVGVSLWDELSLATFHNIWQQPNLLRAIVNSMAIGIVGGALAVICYLFVGIAMHRKADNVTRFLDYSVLVPRAVPGLLAGLAFLWVFLFVPMWLDQSLKHGWLSALPVADWLREHLIVQLRALRNTIFSVWLAYTVVWMAYGLRLISSTLLQVGPELEEAARSTGASRGQITRHVTVPLSRYGLIGSWLLMFLIFEREYSTGVYLLSPGTETIGSMLVSLWAAGAIDIVAALSFINILLVVIGLGIALRFGVKLHD
>CP033631.1|AYW19386.1|2502074_2503163_+|ABC-transporter-substrate-binding-protein
MYKKISGLVVSLTAVFACAAWAEVPAGYPADYQKTVDAAVKEGKVVIYSTTDTKAAGPLIKGFEAQYPGVKVEYNDMNSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAEQYASPEVKQLPDWAVWQQKAYGTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADKFKGKVTTYDIEKSGLGFMLAVQDSQADANYFTDLANIAKGGLTVQSSTGTMMERVSSGENLIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYVLSEKGQQILASQADIPSIRRDIEGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQFIKQWRSAAAK
>CP033631.1|AYW19385.1|2498295_2500446_-|formate-dehydrogenase-subunit-alpha
MKKITSVCPYCGAGCKLKLVVDNNKIIRAEAADGVTNQNQLCLKGYYGWDFLNDTQLLTPRLKQPMIRYQKGGAFTPVSWQEAIRYTASKLREIKEKHGPRAIMTTGSSRGTGNETNYVMQKFARAVLNTNNVDCCARVCHGPSVAGLQQALGNGAMSNSISDIENSKCLLVFGYNCADSHPIVARRVIKARENGAKIIVCDPRRIETARIADRHLQLNNGSNMALVNAFGYVLLEEELYNKAYVERYTEGLDAYREAVKDYAPEAVEAIVGVSAQAIREAMRIFAAAPSATIMWGMGVTQFGQAVDVVRGLASLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNLFPGYQEVTDPAVREKFAAAWGVDPALMDDQVGTRITEVPHKALTGEIKAYYIMGEDPLQTEADLGLVRKGIEALDFVVVQDIFMTKTAEIADVLLPATSWGEHGGVFTCADRGFQRFEQAIPPAGNVKRDWEIISLLASEMGYPMHYENNQQIWDEMRELCPLFYGVTWEKMGDMGHVQWPCPTLDHPGTPWLYKDNRFDTPSGKGQLFATAWRAPAERPDDEWPLVLCTVREVGHYSCRSMTGNCAALQSLADEPGRVQMNPLDAQRLGIADKQLVWVSSRRGKVITRADLSDRINPGAVYMTYQWWVGACNELTQDNLDPISKTPETKYCAVKVEAIADQQWAERYAWTAYSDMKARLKAAADV
>CP033631.1|AYW19384.1|2497095_2498253_+|amidohydrolase
MAVSPSLIAEAVGWRREFHAAPELGYQEQETSRRVAELLASFGLQVHRGLAGTGVVATLENGPGPVIGLRADMDALPITELGSVSYRSRRPGVMHACGHDGHTAMLLAAAAHLAQTRQFSGTVHFVFQPAEENLGGARKMVEEGLFERFPMDAIYALHNWPGIPLGEVALSDGAMMASLDAFEITLRGKSCHAAMPESGADPIVAAAQLIMALQTIPSRRLSPQDSAVVSITQINGGEAINVLPDTVVLRGTFRCLSNRVRARVRELIESYVATQPQVSDVQGEISWFPGYPVTKNHAQQAQQVREVAVATLGAEAVRWNQAPSMASEDFACMLEVCPGAYFWIGTDGETPSKPLHNASYDFNDALISPGVAMWVALVEKQLPAA
>CP033631.1|AYW19383.1|2495599_2496799_-|MFS-transporter
MFNPDQNRLAPTLAMIMAASLVGFITGYTVPLISLELAQQQIAPLYVGLLAALPPAGMMISSFLSPALCRRVEMGVLLSGSLILLALATIASCMTTDMTLLLLPRLLTGLASGVIIVLGESWITGGAAGSQRATLTGIYASAFTGCQLAGPLLISVGPAWQASALMAIVAVTAVCLLMLRHLPTGTRESLGERASWRSLGAFLPVLASGVFCFAFFDASILALLPLYGMDKGLNEGMAVLLVTVVLTGDAMFQTPLGWLADRVGIRRVHLSCAVVFSLSLLALPLMLGSRIQLMAICLLLGAAAGALYTLSLVRAGKTFNGQKLIMINALFGFFWSAGSVAGPVVSGMLIGITGYDGLIVTLVASGVLFLLIQCLCKNEKTLLASEQEEEMDEATESAR
>CP033631.1|AYW19382.1|2495349_2495574_-|hypothetical-protein
MVSIEHVVELHALTLRQGEGALVTDRSMPTGLPESAKESGIRREYGNKLVGKKIPNEPLSTAVFDTITYLLDKR
>CP033631.1|AYW19381.1|2491798_2495182_+|molybdopterin-oxidoreductase
MSEHFVPGYCALCRSRCGTLNEIIDGRLVSVCPDEDHPTGGAVCLKGKAAPELIYSEARVLWPLRRTREKGAADPGWKRISWDKALTEIAEKLTQFKTESGAESVAFGVTTPSGTPIIDSVEWIERFVRHYGSPNTCYSTEVCNWHKDTAHTFTFGCITPTADYSNAELIMLWGNNPAATWLAQASAIGEGRKKGARMLVIDPRHTEFARDADVWLNINPGTDAVLAMGFIRQLLEEGYNEAFVRTWTDAPLLVNEDSGRLLRERDITSDAVTNHYLLWDSVDNIARCCTDAVAGDEVFYQRASLVGRYSLPLANGETAVCTPALEVLRQAVAGYTLEHVATVTGVSIKKQQAAMALIRRSSRIAYHAWVGIAQSQNATQTERAIAILYALTGAFDTRGSNRIYAKPPFNAVNPLSLLPESQRQKALGLSERPLGPPASGYVTTADLHRAILEHKPYKVRGLVCFGSNMLSAHGNVDTAIAALKQLEFHVHCDHFITPTSSFADILLPASTLWEHEALKIGFEISERADAHIQLRPQLVTPRGGSLADYEIVFRLACKMGMGDDFFCGDTDAGFNHILKPSGLTLEMLRAHPGGITTHIVNHEKKYALRDGPDNKPRGFATETGKVEIYSERLLRHGYSPVPQYIEESPNQDAFPLRLTTMKNALFCHSQHRSLVSLRRKSPDPTAIVSRAVADNADIDNRDWIEIITPAGRGRFRAKIDNAIHDDVVIAEYGWWQGCPDLNKPELPIKGEESSNYNLLINYMAVDRISGSVPLRAMRCSVRKVADALAWKGERRFIVSDIVQETPDVRSVSFIPVDGAQLPDWQAGQAVILRVFPKGKPESMCRAYTLSNAPGRKACFTVSVKHQQQGEMSSFIHQNLQVGDEVALTAPDGSFVIPTNSVAPVVMIAGGIGITPFISYLSSLDMTHEGPELWLYYGNRNSQSHAFRKQLEILSQRLPRLNIVNVYDNPRPGDEQGKSYQHTGMITAALIDEKLVSNRARFYLCGPGPMVSALEGGLRERGVFAFDIFKEMFAPPVPRITSLKDSYKVVFARSGVTVLWTPAAGTLLELGEKHQIPMAGGCRAGQCECCAVRVIEGAIGSFTEQTVSDDGLCLACQSVPASDIVIDA
>CP033631.1|AYW19380.1|2490348_2491389_+|porin
MTLQFSRYCLVALSLLFSPGVLAVNLMNQDGKKLDFYGTIIARRFTSNTVKDDGDRSYLYFGLTGKKDLARRWQAYAQWEYTVSASDASRNATRLAFIGIDNPDWGSLDIGRNWGVLYDVTSLTDRSPFFREMSYNYIDNFMRGRALNLMTWRKEITLFQHPLKMALQYQFKGNNDYRTIKQQNGNGYGASLIWYFTPELSALFSASSSATTFYQQQNAGYQKNIRTFAEGLNYNSRKLYLATVMTQSNNAINPQVRDNNTSSISYEALAKYMLTNKFQPDISYTRLTQTVAGRRTQILDYEELGFSYYFNKNMQVFVDYKFNTARDRAAGVDCADKLDTGISYHW
>CP033631.1|AYW19379.1|2489401_2490244_+|N-acetylmuramoyl-L-alanine-amidase-AmiA
MTLDYEITRRKLLLASLATLAANTLISPFTYAQSRSSIISPHSGALTHGRGKYTVMIDPGHGGIDSGAVGHQGALEKHVVLEIANNVKNLLKGYGIEGVLTRSDDTFIPLYERVQIAHAHNASLFMSIHADGFTSPAAHGASVFALSTRGASSAMAKYLSKSENAADDVAGKSVIHKDRYLDKIIFDLEQTETIKESLLLGSHIVRHISPVHHMHSNQTEQAAFVVLKSPYIPSVLVETSFITNPEEERLLGTTAFRHKIASAITNGVVSYFSHKQTVSA
>CP033631.1|AYW19389.1|2506554_2507238_+|DUF4926-domain-containing-protein
MKRAELDVVVLGEDLPNEGLVKGTLGTIVMVFNTPTTGYLVEFCDEKGKTIAMPVLFPAQLKRYFTIGNLKSLMVEGNYPVADPVDPDVMADLMHKVAPVEWEDKKRRVYEDIQRLLISRPDYADMFNIMDGGEYNGMTLYSLVQAENGEPAWSNIFVRNFDTRINEIYVDPNLNDKVVIGEEGMSVIVYSFTDDRFEIRDKVSSDYVIESHTHFTGLLSALIESVS
>CP033631.1|AYW19390.1|2507298_2507670_-|VOC-family-protein
MFDHVKFGASDYAASKTFFLQALAPLGVTLVGEGEPTYGAELAGSGDVSLCLYQSAEKPAPLHIAFRADSREQVDAFWQAALAAGGKDNGAPGVRPNYHASYYAAFVIAPDGHNIEAVCHLAG
>CP033631.1|AYW19391.1|2508173_2508926_+|gluconate-2-dehydrogenase-subunit-3-family-protein
MSSEKTNNSRRDFLVKSMALIPTVVIGGAGAGAIGVATSATAQAAPASEPASGNTAAASDWKPQFFNDREWVFINAAVARLIPADELGPGAKEAGVPEFIDRQLNTPYATGSIWYMQGPFNPDVPKEMGYQLPLVPKQIYNLGIADAEAWCQDKYHKTFAELSSEQQDEALGLWESGKAEFKQLPASLFFTYLLQNTREGFFSDPIHGGNKGMVGWTLINFPGARADFMDWVERGERYPFPPVSINGERA
>CP033631.1|AYW19392.1|2508928_2510713_+|GMC-family-oxidoreductase
MATVLKKTDVAIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTWPDGAYPQVIDELTYNIRRKLFQDLSKSTVTIRHNTSQQAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRMRSHYEERYGKNFIPQDMIIQDFGVTYDELEPFFDKAEKVFGTSGTAWSIKGKVVGKGRGGNAFAPDRSDDFPLPAQKNTWSAQLFEKAALEVGYHPYNLPSANTSDSYTNPYGAQMGPCNFCGFCSGYACYMYSKASPNVNILPALRQEKRFELRTNANVLKVNLTDDKSRATGVTYVDGQGREMEQPADLVIIGAFQFHNVHLMLLSGIGKPYNPETGEGVVGRNFAYQNMTTIKAIFDKDTYTNPFIGAGGNGVGVDDFNADNFDHGAAGFVGGSPFWVNQAGTKPISGFPVPPGTPAWGSKWKAAVADTYTHHLSMDAHGAHQSYRQNYLDLDPNYKNVFGQPLLRMTFDWQENDIKMAQFMFDKMAPIAKAMKPKYILGSPKNANSHFDTTTYQTTHMNGGAVMGEDPKTSAVNRYLQSWDVHNVFVIGASAFPQGLGYNPTGTVAALAYWSAKAIREQYLKNPGPLVQA
>CP033631.1|AYW22288.1|2510726_2512064_+|cytochrome-c
MKMQWLSALVLGALSCAAFAEEAPADSNLIKQGEYLARAGDCVACHTNGKAGKPFAGGLPMETPIGTIYSTNITPDKEHGIGGYTFEEFDDAVRKGVRKDGSTLYPAMPYPSFARISEADMRAMYAYFMHGVEPVNAANKDTDIPWPLSMRWPLAFWRGIFAPTPSDFVANPQVDPVLERGRYLVEGLGHCGACHTPRSLTMQEKALSESEGDDYLAGSNAPIDGWVASSLRGENRDGLGTWSEAELAEFLKTGRNDKSVVFGGMSDVVEHSLQYLSDDDITAIARYLKSLPPRGGKQTPAPVEDSVAKDLWKGNDSKTGAALYVDNCAACHRTDGAGYKRAFPSLKGNPVVQTEDATSLIHIVLTGSTTPAVKDAVSNLTMPSFGWRLDEQQVADVVNFIRTSWGNNAPAVSASDVAKVRKETAAHDEKALGNADISKLPGAGQ
>CP033631.1|AYW19393.1|2512147_2512771_+|cytochrome-c-biogenesis-heme-transporting-ATPase-CcmA
MLHAERLTCIVDDRPLFAALTLSLAAGELLQVAGDNGAGKTSLLRILCGLVRPESGVVSWQGQPLAKVRESFHRQLLWLGHKPGVNAALTADENLRFFFPSSRLQQRESALAAVGLAGYEDLPLSQLSAGQQRRVALTRLWLTDAPLWILDEPFTALDATAMETLTRRLEQHARQGGSAILTTHQPLRPLRCPLRTLRLGGDAGGGQ
>CP033631.1|AYW19394.1|2512767_2513427_+|heme-exporter-protein-CcmB
MMRALLARELRLAWRSGAEILNPLWFFLIVITLFPFGVGAAPQLLAQIAPGVVWVAALLAALLVMDRLFRDDWQDGSLEQLMLLPTPLVAVVLVKVVAHWMMSGLPLLIVSPLAALLLGMSLHDAGVLALTLLLGTPTLSFLGAVGVGLTVGLKRGGVLLSLLVLPLAVPLLIFATAACQAAAAGLPVSGYLAMLAAFLTASATLCPFATAAALRLTVQ
>CP033631.1|AYW19395.1|2513476_2514214_+|heme-ABC-transporter-permease
MWKALHQLAIPERLYRLCGCWIPWLAALSALLLVIGLGWGFGFAPADYQQGESYRIMYLHVPAAMWSMGLYLAMAVAAFVGVVWQIKMADLAIAALAPVGAVCTLVALVSGAAWGKPMWGTWWIWDARLTSELVLLFLYAGVIALWHAFDDRRLAGRAAGILVLVGVVNLPIIHYSVYWWNTLHQGSTNLQQTIDPSMRLPLRICIFAFLMLSVTLTLMRLRNLILQLERRRPWVVALVNKGAAR
>CP033631.1|AYW19396.1|2514210_2514441_+|heme-exporter-protein-CcmD
MSPAFSSFAAFLNMGGYAVYVWLAVAVAVAAFGLLTVHTLWARRALFHEVRRQQARERRIAAAREHDKEAADASAS
>CP033631.1|AYW19397.1|2514424_2514883_+|cytochrome-c-maturation-protein-CcmE
MQARRKTRLYIVLAVLAGLGLTVSLTLYALSSNIDLFYTPGEIIYGKTETRALPHTGQRLRVGGYVQPGSLQRDPQTLDVRFKLYDALGVVDVSYKGILPDLFREGQGVVAQGVLDGERHITAQQVLAKHDENYTPPEVKNAMTPEKTGAQP

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Crispr_ID: CP033631_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033631_2

4189204-4189312

Orphan

Consensus_repeat	Method
AGGGAGAGGGAGCACACCCTAAAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033631_2

>merge|CP033631|2|4189204-4189312|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAGGCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCACAGGGAGAGGGAGCAAACCCTAAAAAAG

>CP033631|2|2|4189204-4189312|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAG	GCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCAC
AGGGAGAGGGAGCAAACCCTAAAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
CP033631.1\|AYW20931.1\|4196627_4196930_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
CP033631.1\|AYW20925.1\|4189464_4190706_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227601
CP033631.1\|AYW20928.1\|4192888_4194391_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
CP033631.1\|AYW20922.1\|4185507_4186776_+\|histidine-type-phosphatase	unknown	unknown	gnl\|CDD\|366031
CP033631.1\|AYW20920.1\|4183203_4184013_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|223559
CP033631.1\|AYW20917.1\|4178256_4179519_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|236821
CP033631.1\|AYW20933.1\|4197305_4197503_-\|YbdD/YjiX-family-protein	unknown	unknown	gnl\|CDD\|225434
CP033631.1\|AYW20921.1\|4184123_4185482_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340870
CP033631.1\|AYW20932.1\|4196904_4197309_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP033631.1\|AYW20924.1\|4187967_4189167_+\|methylthioribose-kinase	unknown	unknown	gnl\|CDD\|236561
CP033631.1\|AYW22367.1\|4182098_4183082_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380501
CP033631.1\|AYW20929.1\|4194554_4195643_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570
CP033631.1\|AYW20934.1\|4197595_4199701_-\|carbon-starvation-protein-CstA	unknown	unknown	gnl\|CDD\|184976
CP033631.1\|AYW20930.1\|4195700_4196444_+\|3-oxoacyl-ACP-reductase-FabG	unknown	unknown	gnl\|CDD\|235500
CP033631.1\|AYW20926.1\|4190808_4191873_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
CP033631.1\|AYW20927.1\|4191893_4192892_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
CP033631.1\|AYW20916.1\|4177196_4177805_-\|methylthioribulose-1-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|236415
CP033631.1\|AYW20918.1\|4179515_4180751_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
CP033631.1\|AYW20923.1\|4186837_4187866_-\|S-methyl-5-thioribose-1-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273112
CP033631.1\|AYW20919.1\|4180747_4181986_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|181713

Protein	Function_ID	Function_description	E-value
CP033631.1\|AYW20931.1\|4196627_4196930_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	9.15731e-08
CP033631.1\|AYW20925.1\|4189464_4190706_-\|hypothetical-protein	gnl\|CDD\|227601	COG5276, COG5276, Uncharacterized conserved protein [Function unknown].	5.2802e-149
CP033631.1\|AYW20928.1\|4192888_4194391_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
CP033631.1\|AYW20922.1\|4185507_4186776_+\|histidine-type-phosphatase	gnl\|CDD\|366031	pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.	1.4583e-59
CP033631.1\|AYW20920.1\|4183203_4184013_+\|inositol-monophosphatase	gnl\|CDD\|223559	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism].	5.05569e-72
CP033631.1\|AYW20917.1\|4178256_4179519_+\|cytosine-permease	gnl\|CDD\|236821	PRK11017, codB, cytosine permease; Provisional.	0
CP033631.1\|AYW20933.1\|4197305_4197503_-\|YbdD/YjiX-family-protein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	1.83996e-37
CP033631.1\|AYW20921.1\|4184123_4185482_+\|MFS-transporter	gnl\|CDD\|340870	cd17312, MFS_OPA_SLC37, Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters. Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.74444e-127
CP033631.1\|AYW20932.1\|4196904_4197309_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.5247e-10
CP033631.1\|AYW20924.1\|4187967_4189167_+\|methylthioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	0
CP033631.1\|AYW22367.1\|4182098_4183082_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380501	cd06278, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	4.29827e-95
CP033631.1\|AYW20929.1\|4194554_4195643_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0
CP033631.1\|AYW20934.1\|4197595_4199701_-\|carbon-starvation-protein-CstA	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
CP033631.1\|AYW20930.1\|4195700_4196444_+\|3-oxoacyl-ACP-reductase-FabG	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.6298e-87
CP033631.1\|AYW20926.1\|4190808_4191873_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	4.03307e-122
CP033631.1\|AYW20927.1\|4191893_4192892_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.16774e-68
CP033631.1\|AYW20916.1\|4177196_4177805_-\|methylthioribulose-1-phosphate-dehydratase	gnl\|CDD\|236415	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase.	1.57474e-138
CP033631.1\|AYW20918.1\|4179515_4180751_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	2.57428e-33
CP033631.1\|AYW20923.1\|4186837_4187866_-\|S-methyl-5-thioribose-1-phosphate-isomerase	gnl\|CDD\|273112	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA. [Amino acid biosynthesis, Aspartate family].	2.37599e-150
CP033631.1\|AYW20919.1\|4180747_4181986_+\|cytosine-deaminase	gnl\|CDD\|181713	PRK09230, PRK09230, cytosine deaminase; Provisional.	0

>CP033631.1|AYW20924.1|4187967_4189167_+|methylthioribose-kinase
MSQYHTFTAHDAVAYAQQFAGIDNPSELVSAQEVGDGNLNLVFKVFDRQGVSRAIVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHSPQHTVKIHHFDPELAVMVMEDLSDHRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFINPAMCEITEDLFFNDPYQIHERNNYPAELEADVAALRDDAQLKLAVAALKHRFFAHAEALLHGDIHSGSIFVAEGSLKAIDAEFGYFGPIGFDIGTAIGNLLLNYCGLPGQLGIRDAAAAREQRLNDIHQLWTTFAERFQALAAEKTRDAALAYPGYASAFLKKVWADAVGFCGSELIRRSVGLSHVADIDTIQDDAMRHECLRHAITLGKALIVLAERIDSVDELLARVRQYS
>CP033631.1|AYW20923.1|4186837_4187866_-|S-methyl-5-thioribose-1-phosphate-isomerase
MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASLLLALLAQRGLNRDALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCDRIAEAGSALVKPGSRLLTHCNTGGLATAGVGTALGVIALAHRQGKVANVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRHCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPTGAAVYNPAFDVTPAGLVSGWVLDSGVVTPAQVAAGAFAPDNG
>CP033631.1|AYW20922.1|4185507_4186776_+|histidine-type-phosphatase
MMPARHQGLLRLFIACALPLLALQSAAAADWQLEKVVELSRHGIRPPTAGNREAIEAATGRPWTEWTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPLQRTRATAQALVDGAFPGCGVAIHYVSGDADPLFQTDKFAVTQTDPARQLAAVKEKAGDLAQRRQALAPAIQLLQQAVCQADKPCPIFDTPWQVEQSKSGKTTISGLSVMANMVETLRLGWSENLPLSQLAWGKITQARQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEANPNVRWLLLVAHDTNIAMVRTLMNFSWQLPGYSRGNIPPGSSLVLERWRNAKSGERYLRVYFQAQGLDDLRRLQTPDAQHPMLRQEWRQPGCRQTDVGTLCPFQAAITALGQRIDRSSAPAVAMVLP
>CP033631.1|AYW20921.1|4184123_4185482_+|MFS-transporter
MSGIIAFFRASPPKAGAAFDEQRFRRVRWQTFIAMTLAYVTFYVCRLSFTVAKSALVDLGITPTELGMIGSTLFFSYAIGKLVNGFIADHANVVRYMSLGLLLSAGMNLMMGMTTNALLLAIFWGINGWAQSMGVGPCAVSLARWYGVKERGTFYGIWSTAHNIGEAVTYMVIAAVIAGFGWQMGYLSTAALGAAGVVLLVLFMHDSPQSSGFPAINVIRDEPQEEAEARGSVFKNQLLALRNPALWTLALASAFMYIDRYAVNSWGIFFLEQDKAYSTLEASGIIGVNAIAGIAGTIIAGMLSDRFFPRNRSVMAGFISLLNTAGFALMLWSPHNYYTDILAMVIFGATIGALTCFLGGLIAVDISSRKAAGAALGTIGIASYAGAGLGEFLTGIIIDKTAILENGKTLYDFSTLALFWVGTGLGSALLCFTTAAIVARRHAVERQTSFSS
>CP033631.1|AYW20920.1|4183203_4184013_+|inositol-monophosphatase
MQSQESEALQARYRLACELAKAGAELAFEYYQQREALTVDHKGDDLQDVVSVADKRVEAFVKQRIQSAFPQDGFLGEESGTRLPDARILWVVDPIDGTSCFLNGLHTWCLSLAIVADGEPVIGVVYDPNHRELFHALRGHGAWLNDAPIRPHPATTVKEGVMGVGTSHRVTPADFLPFLQALLSDGGMFIRNGSGALMSAWAAAGRLIGYYEPHMNPWDALPGLVLMREAGGASNDFLAQEGIQRGNPLLLASQTLYPQLKKMIPQPLH
>CP033631.1|AYW22367.1|4182098_4183082_+|LacI-family-DNA-binding-transcriptional-regulator
MSDKKWIKAEDVARLAGVSRSAVSRTFTPGASVSEKTRQKVLSAAEALGYQVNIIARTMITGSSNFIGIVTAGFDNPFRSKLLAPLVHQLALNGFMPLLMNADDPQQLAPSLKQLLSYHVAGVIITSGAPPLSLAEEYLARKIPVTLINRHADLAGCDRVCSDNAQGAKLVADLFSRRGWQQVGFIGENRENFSTRQRYEAFIARTSGMAVSSRFCDGGGYQAGYQAARELVAENPGVQALFCATDMLALGALDGLRDAPAPLPAIVGFDDIPQADWQPYQLTTVQQNTALLAHHAVDLLMTRIARFSLPSRHREVPVKLIIRHSAK
>CP033631.1|AYW20919.1|4180747_4181986_+|cytosine-deaminase
MKIINARLRRQEALFTLDLQDGMIHRITAQAAMQSADAGDIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALKALLAVKQEAADLIDLQIVAFPQEGIESYPDGRGLMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARMRGMGAQVTASHTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGKVILQREVEHIRYPA
>CP033631.1|AYW20918.1|4179515_4180751_+|PucR-family-transcriptional-regulator
MSLTVSELLALEGLSALRLRAGKQGLQRAVRWYYVAENEHIAEWIMGGELVFITGINHPRDETNLIQLLMEGKQRGIAGMVILTGEAYIHAIPATLIALADELGIPLIEQPYLLKMVIVTERIGTALVRSENALQSQRDILMQLVTGDYPDLQMLHQRALHQQLDFTRPLRLAALRLEGLSRLFRQFPPEQAEAWLLQAHRSVRQQLQQQLNQQGNPFPLLERSNMFLFLLPDEEGEGFQQKKWLQQWLQALADGEEGLSLLCGLSAPVRQLQGYPRALSQARQALDLCDTLRPTQRISDYQQLGFIKLLSAVSDPALLNDFMHDTLGCLIEPGRKAPWLLLETLETLLQENGNVVRAADRLGLHRNTLHQRIQRIEKLTGYPVSHPQFHLNASVALVIWRLSQNHLQDPP
>CP033631.1|AYW20917.1|4178256_4179519_+|cytosine-permease
MSNSNDFPLVEAPAAGRKGVFSIAMVLFSFTFFTGTMFAGGKLGVSFSIVNLLWIAVIGNALLALYAASLGWIAARSGLNTVLMGRFCFGEIGSKLADFILGFAELGWYAWGTATVAISLVKILALPEALTQPLMVLFGILFCVTALVGYKGLDALSRLSVPLMFVLLMVSMYLALHHAGGWQAMTHIAPSDTMTWSAAITMVFGTFASGATQATNWTRLANSSRTAILASMGSFLIGNGLMIVAGAWCAIVYQQADIVEVLILQGLSVAAVIMLCLNLLTIQGPTIYNVSAAACHMLRSERRRTLTLAAAGVGIVLAIGGMYEMLIPFLVLLGSIIPPIGGVILADYWFARGGRYPLLQNARLPRFNWLGLGAYAAGAVVAYLSPWIAPLVGITVSALVYIALTLLSKRQPAAVAEQEP
>CP033631.1|AYW20916.1|4177196_4177805_-|methylthioribulose-1-phosphate-dehydratase
MWQERLAQLVTTCHWIGAKGWAPATGGNMSVRQDDTWCWLSESGRDKGSLTTEDFLQVEIATNQAPSGRKPSAETGLHTLVYRLFPEANVVLHVHTVNATVLSRIEKSDTLALQGYEMQKTLSGQHSHLDTVPVAIFDNDQDIDALAARIADYAQTRPLRYGFLLRGHGLTCWGKDIQEARRQLEGLEFLFECELMRRRYEP
>CP033631.1|AYW20925.1|4189464_4190706_-|hypothetical-protein
MSALPSPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSVVDVRDPTRPTTVNYIAAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRSVGDTVSDVQDKGWSAGLRIFDISTPAQPREISFLSLNGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADPRKPEVAGRWWLPGMHQAGGETPDWPQGKRYALHHAIIAGDTAYGSWRDGGLTLLDVKDRTQPTLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPANPVSISTFPQPDEIDYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPLETGALVPAAPKTMMDTRPGRPQVIQSCDVFVDAQGIIYSTDYNGGLSVIEYLG
>CP033631.1|AYW20926.1|4190808_4191873_-|sugar-ABC-transporter-substrate-binding-protein
MKKIALSLMTLGLLQSTAALATAPTPVPAAIAEHSGPIRIAVIRNLGSDDNTTQFVSGALQEGKKLGFKISTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIKVAVFDTAVSGEIPGVTVSQQDDASLTELSFGQLVKDFNGKANIVKLWVAGFPPMERRQAAYQTLLKQNPGIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYKALKENGRTEIKLYSIDISNQDLQLMREAGSPWKVSVAVDPKLIGATNVRLIANKIAGEPTPATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK
>CP033631.1|AYW20927.1|4191893_4192892_-|ABC-transporter-permease
MSKALAVNATVSGRQRFFDFLYKWGMLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEAILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIVIIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT
>CP033631.1|AYW20928.1|4192888_4194391_-|sugar-ABC-transporter-ATP-binding-protein
MSANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYEGEVTINNQPVIIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESERLFAVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKMLGHELSDIFPPPRPPHGEEVLLQIDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQMLRRLSGGNQQKVAIGKWLRSHANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEIPGAEAREETLLYYSTGGAAA
>CP033631.1|AYW20929.1|4194554_4195643_+|oxidoreductase
MSNSDIRVVPGPANYFSHPGSLERLSNFFSADQLSRAVWVYGERALAGAEPFLPAAFHLPEAKKIRFTGHCSERDVAALVQASGDDRAVVIGVGGGALLDSAKVLARRLGVPLVAIPTIAATCAAWTPLSVWYSDAGQALNFEIFDDANFLVLVEPRIILNAPAEYLLAGIGDTLAKWYEAVVLAPQPEALPLTVRLGINGALAIRDVLLASSETALADQSRGDLTQAFRDVVEAIIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTDKFLHGTKVAYGILVQSALLAQDDVLAQLVQAYQRFNLPTTLAALEVDINNRTELDRVIAHTLRPGESIHYLPVTLTPEVLRAAFEKVEYFSR
>CP033631.1|AYW20930.1|4195700_4196444_+|3-oxoacyl-ACP-reductase-FabG
MQIDLTGKKALVTGASRGLGRAIALSLARAGADVVITYEKSADKAQAVADEIKALGRHGEAVQADSASAQAIQEAVTHAARSLGGLDILVNNAGIARGGPLESMTLADIDALINVNIRGVVIATQEALVHMADGGRIINIGSCLANRVAMPGIAVYAMTKSALNALTRGLARDLGPRGITVNLVHPGPTNSDMNPEDGEQAEAQRQMIAVGHYGQPEDIAAAVTFLASPAAGQISGTGLDVDGGLNA
>CP033631.1|AYW20931.1|4196627_4196930_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKIVWSKTADKPFSKIDNRYKSRIKSRLEKMDDKASSISDIKKLSSPENHYRLRLGDYRVIYTFGDPPGDTCYVVAVKRRTTTTYLHEEDTEYDYSVHQG
>CP033631.1|AYW20932.1|4196904_4197309_+|XRE-family-transcriptional-regulator
MTIQYIKDEEGKDQYVVIPYSDYFRMRLALLEYDDEDESDWEDIPYESDIYDNVMLPGEVCDVMHKENVSLQAAWRILRGLSQQEVAAKLGISQSAVSQLEALDSRPQKRTREKLAAIYGCTQEQISLYLPKEG
>CP033631.1|AYW20933.1|4197305_4197503_-|YbdD/YjiX-family-protein
MFDTLSKAGKYLGQTAKMMIGVPDYDNYVEHMRITHPDQTPMTYEEFFRERQDARYGGKGGAKCC
>CP033631.1|AYW20934.1|4197595_4199701_-|carbon-starvation-protein-CstA
MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVAESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWGFSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMIVVVVLALFSIKTALAALKEDKPTAKETPYQAMPADAQTITAQAKRAH

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Crispr_ID: CP033631_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033631_3

5266282-5266391

Orphan

Consensus_repeat	Method
CAGCGCAAGCCGGGGAATTTCCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033631_3

>merge|CP033631|3|5266282-5266391|CRISPRCasFinder
CAGCGCAAGCCGGGGAATTTCCCGGGTCGCGGCGTTCCGCCTTACCCGGGCTACCGGACAGTGCAAACAGTAGCCCGGCTAAGCGCAGCGCAAGCCGGGGAGTTTCCCGG

>CP033631|3|3|5266282-5266391|CRISPRCasFinder
CAGCGCAAGCCGGGGAATTTCCCGG	GTCGCGGCGTTCCGCCTTACCCGGGCTACCGGACAGTGCAAACAGTAGCCCGGCTAAGCG
CAGCGCAAGCCGGGGAGTTTCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP033631.1\|AYW21873.1\|5263142_5263928_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|239321
CP033631.1\|AYW21876.1\|5265898_5266204_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
CP033631.1\|AYW21875.1\|5264981_5265899_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
CP033631.1\|AYW21881.1\|5272116_5273619_-\|proline/glycine-betaine-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
CP033631.1\|AYW22410.1\|5255655_5256222_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
CP033631.1\|AYW21882.1\|5274163_5274499_+\|phnA-family-protein	unknown	unknown	gnl\|CDD\|182315
CP033631.1\|AYW21877.1\|5266414_5266786_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|119304
CP033631.1\|AYW21884.1\|5275317_5276043_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|182227
CP033631.1\|AYW21872.1\|5262646_5263096_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	unknown	unknown	gnl\|CDD\|184756
CP033631.1\|AYW21870.1\|5256833_5259302_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|236644
CP033631.1\|AYW21869.1\|5255053_5255344_-\|PerC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|310570
CP033631.1\|AYW22411.1\|5259310_5261326_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|184754
CP033631.1\|AYW21883.1\|5274727_5275162_+\|VOC-family-metalloprotein-YjdN	unknown	unknown	gnl\|CDD\|236656
CP033631.1\|AYW21885.1\|5276043_5276496_+\|phosphonate-C-P-lyase-system-protein-PhnG	unknown	unknown	gnl\|CDD\|377702
CP033631.1\|AYW21871.1\|5261318_5262647_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP033631.1\|AYW21879.1\|5269536_5270889_-\|alpha-glucosidase/alpha-galactosidase	unknown	unknown	gnl\|CDD\|185035
CP033631.1\|AYW21880.1\|5271125_5272067_+\|transcriptional-regulator-MelR	unknown	unknown	gnl\|CDD\|182416
CP033631.1\|AYW21874.1\|5264152_5264836_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|163429
CP033631.1\|AYW21878.1\|5266795_5267752_-\|recombinase	unknown	unknown	gnl\|CDD\|310773
CP033631.1\|AYW22412.1\|5268027_5269431_-\|melibiose:sodium-transporter-MelB	unknown	unknown	gnl\|CDD\|182453

Protein	Function_ID	Function_description	E-value
CP033631.1\|AYW21873.1\|5263142_5263928_-\|DsbA-family-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.15125e-50
CP033631.1\|AYW21876.1\|5265898_5266204_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	1.06579e-57
CP033631.1\|AYW21875.1\|5264981_5265899_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
CP033631.1\|AYW21881.1\|5272116_5273619_-\|proline/glycine-betaine-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
CP033631.1\|AYW22410.1\|5255655_5256222_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	5.59561e-07
CP033631.1\|AYW21882.1\|5274163_5274499_+\|phnA-family-protein	gnl\|CDD\|182315	PRK10220, PRK10220, phnA family protein.	2.42094e-75
CP033631.1\|AYW21877.1\|5266414_5266786_-\|plasmid-stabilization-protein	gnl\|CDD\|119304	pfam10784, Plasmid_stab_B, Plasmid stability protein. This family is conserved in the Enterobacteriales. It is a putative plasmid stability protein in that it is expressed from the operon involved in stability, but its actual function has not yet been characterized.	5.76781e-11
CP033631.1\|AYW21884.1\|5275317_5276043_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|182227	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional.	1.31539e-164
CP033631.1\|AYW21872.1\|5262646_5263096_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	gnl\|CDD\|184756	PRK14584, hmsS, hemin storage system protein; Provisional.	8.36997e-77
CP033631.1\|AYW21870.1\|5256833_5259302_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|236644	PRK10049, pgaA, outer membrane protein PgaA; Provisional.	0
CP033631.1\|AYW21869.1\|5255053_5255344_-\|PerC-family-transcriptional-regulator	gnl\|CDD\|310570	pfam06069, PerC, PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	1.1593e-20
CP033631.1\|AYW22411.1\|5259310_5261326_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|184754	PRK14582, pgaB, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB.	0
CP033631.1\|AYW21883.1\|5274727_5275162_+\|VOC-family-metalloprotein-YjdN	gnl\|CDD\|236656	PRK10148, PRK10148, VOC family metalloprotein YjdN.	3.99696e-94
CP033631.1\|AYW21885.1\|5276043_5276496_+\|phosphonate-C-P-lyase-system-protein-PhnG	gnl\|CDD\|377702	pfam06754, PhnG, Phosphonate metabolism protein PhnG. This family consists of several bacterial phosphonate metabolism protein PhnG sequences. In Escherichia coli, the phn operon encodes proteins responsible for the uptake and breakdown of phosphonates. The exact function of PhnG is unknown, however it is thought likely that along with six other proteins PhnG makes up the the C-P (carbon-phosphorus) lyase.	4.91771e-64
CP033631.1\|AYW21871.1\|5261318_5262647_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP033631.1\|AYW21879.1\|5269536_5270889_-\|alpha-glucosidase/alpha-galactosidase	gnl\|CDD\|185035	PRK15076, PRK15076, alpha-galactosidase; Provisional.	0
CP033631.1\|AYW21880.1\|5271125_5272067_+\|transcriptional-regulator-MelR	gnl\|CDD\|182416	PRK10371, PRK10371, transcriptional regulator MelR.	0
CP033631.1\|AYW21874.1\|5264152_5264836_+\|TerC-family-protein	gnl\|CDD\|163429	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.	2.5424e-70
CP033631.1\|AYW21878.1\|5266795_5267752_-\|recombinase	gnl\|CDD\|310773	pfam06406, StbA, StbA protein. This family consists of several bacterial StbA plasmid stability proteins.	1.27479e-143
CP033631.1\|AYW22412.1\|5268027_5269431_-\|melibiose:sodium-transporter-MelB	gnl\|CDD\|182453	PRK10429, PRK10429, melibiose:sodium transporter MelB.	0

>CP033631.1|AYW21876.1|5265898_5266204_+|chaperone-modulator-CbpM
MATVTVTFTITELCLRTGVSEEELTEIVGLGMIEPHQPQAETWLFDDSAVTIVHRAVRLRNELELDWPGIAVALTLLDENARLTRENRLLQQRLARFLAHG
>CP033631.1|AYW21875.1|5264981_5265899_+|curved-DNA-binding-protein
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKESDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQQQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKMLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKVVMPPKPDEKARELWQQLAAAEASFDPRKTWGKA
>CP033631.1|AYW21874.1|5264152_5264836_+|TerC-family-protein
MNALLQQWDMAVIMLQIVAIDLLLGGDNAVVIAMACRKLPPQKRTKAIIIGTVGAILARVLLLALALYLLSLPWLKIVGALLLLWIGMKLVSNEEEESEVGSSASLWRTAITITVADVIMSLDNVLAVAAAGKGHIALVALGVAISIPIIVAGSKLVLVLLTRFPAVVLLGGMLIGWIAGSMLVSDPTIQQLFPAAGDGTARVAGAVGALLVLFEGWRRRPRPQAKE
>CP033631.1|AYW21873.1|5263142_5263928_-|DsbA-family-protein
MSGHKKYLSVALLSAVLLPAMASAADSPATFTPEQEAKIGKIAADYLVAHPEVLLQASQKLQQIQAEQQASAATQAVLKNADVLTQDKNTPTYGPANGKVTVIEFFDYQCVYCSRLAPVMEQVIKAHPQTRFAFKEWPIFGGRWESSLEAAKTGLQIYQQKGADAYLAYHNGIYATGHNEGKLTTADIQQQAKKAGFDAKKVTDVEPVLQSINDLAQEIGLSGTPGVIVMPTTGATEASITVFPGLADQASLEAAIKKAGG
>CP033631.1|AYW21872.1|5262646_5263096_+|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD
MNENTLILTEHRVLPRLVDAGLTLLAWLGFLFFLYTNLLMQFIAPPSPRWESLMASLNTALVYLLIAALNGWLLILWYHYNRRRARTRHHTAVLTLRHDELASSFNVAPQIISEMSRYNLLTVYHDQIGQIIDLKSHALPPPQEESDRA
>CP033631.1|AYW21871.1|5261318_5262647_+|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MTDRIIALCILCLVFGLPLGVAAVFTGELILDFVFFWPLFMSVLWITGGLYFWFQLERHWPWGEDTPPPTLPGNPLISILIPCFNEEKNARETISAALAQRYANLEVIAINDGSSDNTAQVLQQLAQEEPRLRVIHLAANQGKAVALKAGAAAARGDLLVCIDGDALLDRDTAAWLVAPLIHYPHVGAVTGNPRIRTRSTLIGRIQVGEFSSIIGLIKRTQRIYGRVFTVSGVIAAFRRQALADVGYWSPDMITEDIDISWKLQLRHWDIFFEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLVNLRRLFHWEHHRMWPLFLEYACSTLWAFAYAVTILLFILSRLMPLPDNLAVHSLFPPEFTGMLLGVMCLLQFVASLYIERRYEKKVAKSLFWVIWFPMVYWMIGLLTTLVAFPKVMVKRQRSRARWVSPDRGKGSL
>CP033631.1|AYW22411.1|5259310_5261326_+|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MLNTTLRNGLMLLVWLCLIFSVRAEEVPFLAPQQRPQPEANQPWPADRFLVLAYHDVEDDAADQRYLSVRTSALNEQIAWLLDHGYHAVSVQDILDANQGLKPLPPKAFLLSFDDGYSSFYTRVWPLLKAWNVPALWAPVGSWVDTPADQPVNFGGLMTPRERFATWEMVRELSRSPLVEIGAHTWASHYGLPANPQGSREPAAANRGWDKTTGRYESDAQFTRRMADDVQKVTAKIHEVAGKAPRAWVWPYGAASGSTLAIAKQQGYQLAFTLNDGLGNVKDLDNIPRMLIAGNPSIKAFANAVTQIQEADPVRVMHVDLDYVYDPNPVQQAKNIDKLVQRVYDMKISHVFLQAFSDPQGDGTVKSLYFPNRWLPMRADLFNFVSWQLQTRGGVKVYAWMPVLAFDLSSDLPRVQRWDPQTGKALLARQPYVRLSPWDPRVRQQITDIYEDLARHASFSGILFHDDAVLTDFEDVSPEAVAAWRQTGLGHDAGPVPQRPQERQAWMRFKSQTLTRFTLDLRQAVQAIRGPQVKTARNLFALPILEPQSEAWFAQNLDDFLAAYDWTVPMAMPLMESVPIDASQAWLTRLVQAVASHPGALKKTIFELQARDWNRRQQNAIPDQQLADWMRLLRLNGVKNYGYYPDDFINNQPDISRIRPQFSSWWYPDHD
>CP033631.1|AYW21870.1|5256833_5259302_+|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNIWQIEMERSPYSNTLLFNRNTKLSLSIGLLLLFPALVQGADSLYDQQILQARQGQYAPFLSYLQQYQLRHALTPSQVADWLQVALWAGQDDEVVKVWRRYQVYMPLPARGTAAAAQALRNQKQWQASLTLWQQALSQAPDSDDYRIGYIKTLADARKDGEALSEARRLVAEQASVAHLQTLSYVYLRLGKSWDQLLVDTQILDREPQNKAALASLMATLTRNRIDSPALGLANSVELTPAEKRNLQLNAAAELVRLADTPSREENARYALARTALTQYDAMIAAWHPDPQAAPDIIRARVDRLGALYANADYAQVIREYQNLIAQQQTVPDWAIGWVISSYIALKQIEPALTLIHQHPSWLTSQQNEEHELFYALLDTGQYPAAQQYVARLTRNAPYIRRLYGSPTPQPNDDWLTAQSLNVHYLAATNALPQAEARMQRLAATAPGNQGLQIDYAALLQDRGLPRAAESQLKAAESLEPASLQLERQQAWVALDLQEWRQMDLLTDDIVARSPRDLNTQRLARAREVHHLSELRLSVGKGLHSDNPVSGTHDLSFETAIYSPPLADSWRLFGGHRFAEGNFEEGKGSRRQLFAGVEWRPRDYWGELELSSVNFHGENKPGVRLSAAHDVSDRWQLGGELERISQQTPLRALRNGVSANRGEGWLRWYQNERREYRVSMAASRFTDRNRRQEYTLAGKERLWQTPWLTLDLQPGLSASANSRTDTAYYSPARDLAATAALAVDHTLYQRYDTVWSQQLLAGGGSYWQKNHAAGAITVLSYGQRLRWNNVVDTGVMLNWDKRPYDGKRENNLAITLDANIRF
>CP033631.1|AYW22410.1|5255655_5256222_-|LuxR-family-transcriptional-regulator
MILVTQDYYLFQGVKNFFPDIIQLDSSGKTILDNEVDEVSLLVDSRSPLCHYDYLVMEAAQSRKRICCIVLDMRHREEHLLSLKSFLNMSLSPADMATLFGLFLEMKSKRLTKEWFDDLRLSLSEQLMLRLLGAGMTMEEVAVNLNTSVKSLYRKRTALYERLGLDNFNEACLFIFRNKLLEHSVRSP
>CP033631.1|AYW21869.1|5255053_5255344_-|PerC-family-transcriptional-regulator
MRIRDSIAERLEASGLYRRAASRWIEVMQRCLNDDDREWIRHHRNQCLKKAQRPQAPKEEFADLHQAAKETQYRMGIAKPYGEAFRLPGKGKTAAE
>CP033631.1|AYW21877.1|5266414_5266786_-|plasmid-stabilization-protein
MTLDRRKVLIYLRPDISASERFADAKIEAHHRGDRGDMSRTALLAGLALGEVDSRLPSMLAALLAEDTKPETLRKMLASFLEIQPASSAPASAPAAAPAKAPEPPAPVSESVSARNLAGSLPD
>CP033631.1|AYW21878.1|5266795_5267752_-|recombinase
MRIFIDDGSTNIKMLWEQDGETFTHISPNSFKRGWSATFGSGKPFNYTVDDEKYSFDLITPDALPTNNIDWQYSPLNSIAVHHALLTSGLEPQDVEIVVTLPLTEFYDEDAQYRLDNIERKKKSLLRDVKLNKGVVFNITKVTVRPESIPAGISLCDELKPSHSVLIIDLGGTTLDISMVAGQMTSVSRIYGDPKLGVSLVTDAVKLALARANTDTSSYNVDQIIINRHDEEYLTDNINDPDAVSEVKKVINNSIERLTTRVLTAIDSFKGYSHAIVIGGGAPLVADAIRERMGLREDRFVVAEEPQFALVRGLKIIG
>CP033631.1|AYW22412.1|5268027_5269431_-|melibiose:sodium-transporter-MelB
MTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNCTRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMDVPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVSAVGGADRGFGFQMFTLVLIAFFVISTLVTLRNVHEVYSSDSGVSEDSSHLSLRQMVALIYKNDQLACLLGMALAYNTAANIIAGFAIYYFTYVIGSAEMFPYYMSYAGAANLLTLILFPRLVKGLSRRILWAGASIMPVLGCGVLLLMALSGVYNIALISLAGVLLNIGTALFWVLQVIMVADTVDYGEYTMNIRCESIAYSVQTLVVKAGSAFAAWFIAIVLGIIGYVPNVVQSSHTLLGMQAIMIALPTLFFALTLFLYFRYYKLNGDMLRRIQIHLLDKYRRVPENVVEPERPIVVPNQV
>CP033631.1|AYW21879.1|5269536_5270889_-|alpha-glucosidase/alpha-galactosidase
MTAPKITFIGAGSTVFVKNILGDVFQRPALKSAHIALMDIDETRLEESHIVVRKLMDSVGANGEISCHRDRKTALQGADFVVVAFQIGGYEPCTVTDFTVCKRHGLEQTIADTLGPGGIMRALRTIPHLWAICDDMTEVCPDATLLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLDLDPADLRYRCAGINHMAFYLSLEKKLADGSYVSLYPDLLQAYAEGRAPKPNLHGNPRCENIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGRDDLIARYKVPLDEYPKRCVEQLANWHQELESYQRGERIEVKPSREYASTIMNAIWTGEPSVVYGNVRNDNLIDNLPQGCCVEVACLVDANGIQPTKVGALPAHLAALMQTNINVQTLLTQAILNEDRDYVYYATMMDPHTAAVLGIEEIYALVDDLIASHGDWLPAWLHR
>CP033631.1|AYW21880.1|5271125_5272067_+|transcriptional-regulator-MelR
MMEHRFTSLPPDPFMCSSDEKQSRSPLALYSEYQRMDIELRPPHAMPTSHWHGQVEVNVPFDGDVEYLINNEVVRIEKGYITLFWACTPHQLTRPGDCQQMAIFNLPMHLFLSWPLDRELINHVTHGMVIKSLAAQQLSAFEVRRWQQELNHDNEQIRQLAIDEIALMLKRLSLSGWQPILVNKTSRTHKNSVSRHAQFYVSQMLEFIAAHYDQALTVNAVAEHVKLNPNYAMGVFQRVMQQTMKQYITAMRINHVRALLSDTDKTILDIALTAGFRSSSRFYSTFTRYVGMPPQQYRKLSQQRRHGLALPEA
>CP033631.1|AYW21881.1|5272116_5273619_-|proline/glycine-betaine-transporter-ProP
MLKRKKIKPITLKDVTIIDDGKLKKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPDANPSVQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISSVVGEQNFLDWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVDTMEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMVGMLFVQPVIGMLSDRFGRRPFILIGSVALFALAIPAFIMINSNVIGLIFAGLLLLAVVLNCFIGVMASSLPAMFPTHIRFSALASAFNISVLVAGLTPTLAAWLVETTQNLMMPAYYLMVIAVVGMATGLSMKETANRPLKGATPAASDIQEAKEILGEHYDNIEQKIEDIDQEIADLQAKRSRLVQQHPRIND
>CP033631.1|AYW21882.1|5274163_5274499_+|phnA-family-protein
MQLPHCPKCDSTYTYEDNGMYICPECAHEWNPAEATEESDVLIVKDANGNLLADGDSVTVVKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
>CP033631.1|AYW21883.1|5274727_5275162_+|VOC-family-metalloprotein-YjdN
MSLSPYLAFAGNCAEAIAFYQQTLGAELMFKMTFGEMPPPAQEASDGCPSGQKMADDAIAHASLRINNGELMLSDSAFGPDVHYAGFTLVLDPSDVAEGQRWFDALAVGGRIEMAWQETFWAHGFGKVVDRFGVPWMINVVKQG
>CP033631.1|AYW21884.1|5275317_5276043_+|phosphonate-metabolism-transcriptional-regulator-PhnF
MHLSRHPTSYPTRYQEIAARLEQELRHHYRCGDYLPAEQQLATRFDVNRHTLRRAIDQLVERGWVQRRQGVGVLVLMRPIDYPLNAQARFSQNLLEQGSDPTSEKLLSVLRPASAHVAEAFDINEGENIIHLRTLRRVNGVALCLIDHYFADLRFWPVLQTFSHGSLHDLLRDELDVKLTRARTKISARRAQAKESKLLEIPNMAPLLCVRTLNSRQGEQTPIEYSVSLTRADMIEFTMEH
>CP033631.1|AYW21885.1|5276043_5276496_+|phosphonate-C-P-lyase-system-protein-PhnG
MHFDTATRQRWMSVLAHSEPQDLLARMQSLQLAPAYELIRTPETGLVQLQARMGGIGDRFFAGDATLTRAAVRLADGTLGYSWILGRDRPHAERCAAIDALLQSPRHFHTLMETLITPLEALRSARIEARRAEVNASRVDFFTLVRGDNA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

708331 : 748830

Salmonella_phage(84.62%)

lysis,tRNA,tail,capsid,portal,head,plate,integrase

attL 708246:708292|attR 742641:742687

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
708246:708292	attL	NA	NA	NA	NA
AYW17783.1\|708331_709417_-\|integrase	site-specific integrase	F1BUS9	Erwinia_phage	2.6e-121	60.7
AYW17784.1\|709418_710297_-	hypothetical protein	NA	NA	NA	NA
AYW17785.1\|710305_710929_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	5.3e-34	38.5
AYW17786.1\|711029_711266_+	regulator	NA	NA	NA	NA
AYW17787.1\|711300_711810_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	2.1e-76	84.0
AYW22207.1\|711817_712018_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.3e-26	84.6
AYW17788.1\|711981_712323_+	hypothetical protein	A0A1S6L019	Salmonella_phage	4.2e-49	85.8
AYW17789.1\|712390_712624_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	3.5e-31	92.2
AYW17790.1\|712623_712851_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	2.5e-34	90.7
AYW17791.1\|712847_713735_+	DNA adenine methylase	E5G6L8	Salmonella_phage	6.9e-112	69.4
AYW17792.1\|713715_716121_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.7
AYW17793.1\|716292_716481_+	hypothetical protein	A0A1S6L006	Salmonella_phage	7.9e-26	98.4
AYW22208.1\|716494_716728_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.3e-30	81.8
AYW17794.1\|716803_717061_+	hypothetical protein	NA	NA	NA	NA
AYW17795.1\|717314_718583_+	hypothetical protein	NA	NA	NA	NA
AYW17796.1\|718655_719693_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	2.0e-174	88.2
AYW17797.1\|719692_721456_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	92.6
AYW17798.1\|721596_722430_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.1e-102	76.9
AYW17799.1\|722446_723511_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.4e-183	93.7
AYW17800.1\|723514_724165_+	hypothetical protein	E5G6M7	Salmonella_phage	3.6e-102	86.1
AYW17801.1\|724261_724726_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	2.1e-75	87.0
AYW17802.1\|724725_724929_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	8.3e-29	86.6
AYW17803.1\|724932_725148_+	hypothetical protein	E5G6N0	Salmonella_phage	1.0e-29	88.7
AYW17804.1\|725128_725638_+	lysozyme	E5G6N1	Salmonella_phage	3.3e-82	84.0
AYW17805.1\|725642_726071_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.5e-51	78.7
AYW17806.1\|726166_726598_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AYW17807.1\|726590_727034_+	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	9.6e-54	77.1
AYW17808.1\|727046_727481_-	hypothetical protein	NA	NA	NA	NA
AYW17809.1\|727565_728138_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	7.9e-77	72.3
AYW17810.1\|728134_728497_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.4e-49	85.6
AYW17811.1\|728483_729392_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	3.4e-106	67.2
AYW17812.1\|729384_729984_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.2e-56	60.5
AYW22209.1\|730777_734215_+	hypothetical protein	NA	NA	NA	NA
AYW17813.1\|734229_735306_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.1e-29	41.3
AYW17814.1\|735453_736626_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	8.6e-211	93.6
AYW17815.1\|736635_737151_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.8e-81	84.8
AYW17816.1\|737204_737504_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	79.0
AYW22210.1\|737518_737638_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AYW17817.1\|737630_740258_+\|tail	phage tail tape measure protein	A0A2H4JGB2	uncultured_Caudovirales_phage	1.2e-116	38.1
AYW17818.1\|740254_740740_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.5e-63	80.1
AYW17819.1\|740736_741834_+	phage late control D family protein	E5G6Q3	Salmonella_phage	6.7e-173	84.1
AYW17820.1\|741904_742123_+	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AYW17821.1\|742135_742513_-	hypothetical protein	NA	NA	NA	NA
AYW17822.1\|742840_743347_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
742641:742687	attR	NA	NA	NA	NA
AYW17823.1\|743446_745288_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
AYW17824.1\|745506_747252_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.2e-75	38.2
AYW17825.1\|747363_747579_-	30S ribosomal protein S21	NA	NA	NA	NA
AYW17826.1\|747816_748830_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.7e-109	59.5

DBSCAN-SWA_2

1501226 : 1570579

108

Salmonella_phage(17.11%)

head,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYW18512.1\|1501226_1501685_-	nucleoside deaminase	S4VYZ2	Pandoravirus	1.8e-10	36.5
AYW18513.1\|1501817_1502759_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	1.4e-09	24.6
AYW22237.1\|1502755_1503616_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.9e-05	56.8
AYW18514.1\|1503993_1504476_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
AYW18515.1\|1504830_1505034_-	AlpA family transcriptional regulator	I6RSG8	Salmonella_phage	2.5e-17	61.2
AYW18516.1\|1505354_1505984_-	Eac protein	A0A220NQT7	Salmonella_phage	1.8e-85	70.8
AYW18517.1\|1506272_1506530_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	7.0e-25	68.8
AYW18518.1\|1506575_1506809_-	hypothetical protein	NA	NA	NA	NA
AYW18519.1\|1506854_1507091_-	hypothetical protein	G8C7S3	Escherichia_phage	7.7e-10	54.0
AYW18520.1\|1507175_1507478_-	hypothetical protein	K7PJS3	Enterobacterial_phage	1.0e-27	61.0
AYW18521.1\|1508256_1508550_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.9e-43	85.6
AYW18522.1\|1508549_1509383_-	hypothetical protein	A0A2H4N7C3	Pectobacterium_phage	2.5e-07	51.4
AYW18523.1\|1509379_1509586_-	hypothetical protein	R9TRD3	Aeromonas_phage	4.0e-31	95.6
AYW18524.1\|1509582_1509789_-	hypothetical protein	NA	NA	NA	NA
AYW18525.1\|1509798_1510140_-	hypothetical protein	R9TQX7	Aeromonas_phage	1.2e-08	37.4
AYW18526.1\|1510148_1510352_-	hypothetical protein	NA	NA	NA	NA
AYW18527.1\|1510320_1510719_-	DUF2591 domain-containing protein	K7PH48	Enterobacterial_phage	1.0e-14	41.1
AYW18528.1\|1510718_1510895_-	DUF2737 family protein	Q5G8U5	Enterobacteria_phage	5.7e-10	55.4
AYW18529.1\|1510961_1511729_-	dcm methylase	D5LH17	Escherichia_phage	9.4e-65	53.4
AYW18530.1\|1511725_1511950_-	hypothetical protein	G8C7U9	Escherichia_phage	1.2e-20	73.2
AYW18531.1\|1511946_1512219_-	hypothetical protein	Q716F1	Shigella_phage	1.2e-22	62.7
AYW18532.1\|1512215_1512515_-	hypothetical protein	A0A0M4R304	Salmonella_phage	4.5e-23	58.2
AYW18533.1\|1512525_1513008_-	siphovirus Gp157 family protein	K7P6T5	Enterobacteria_phage	1.2e-62	76.2
AYW18534.1\|1513000_1513894_-	DNA recombinase	K7P7A0	Enterobacteria_phage	1.4e-136	82.0
AYW18535.1\|1514178_1514487_-	hypothetical protein	K7PJM4	Enterobacteria_phage	2.1e-23	51.0
AYW18536.1\|1514614_1514905_-	hypothetical protein	R9TNI1	Aeromonas_phage	1.3e-27	63.6
AYW18537.1\|1514904_1515057_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA
AYW18538.1\|1515035_1515173_-	hypothetical protein	NA	NA	NA	NA
AYW18539.1\|1515420_1515729_-	hypothetical protein	A0A1R3Y5U4	Salmonella_virus	3.8e-25	64.6
AYW18540.1\|1515868_1516237_-	DUF2528 family protein	A0A1I9LJN3	Stx_converting_phage	3.2e-47	70.5
AYW18541.1\|1516248_1516503_-	hypothetical protein	Q9EYB0	Enterobacteria_phage	5.0e-07	46.1
AYW18542.1\|1517052_1517415_-	antitermination protein	C6ZR44	Salmonella_phage	3.4e-41	69.2
AYW18543.1\|1517778_1518498_-	XRE family transcriptional regulator	W6MVG5	Pseudomonas_phage	4.1e-46	44.9
AYW22238.1\|1518645_1518882_+	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	7.4e-13	53.3
AYW18544.1\|1519048_1519348_+	hypothetical protein	K7PKU6	Enterobacteria_phage	2.3e-35	76.8
AYW18545.1\|1519372_1519516_+	DUF2740 domain-containing protein	A0A075B8K7	Enterobacteria_phage	9.0e-14	82.6
AYW18546.1\|1519508_1520414_+	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	4.3e-93	60.6
AYW18547.1\|1520403_1521813_+	helicase DnaB	K7P7N4	Enterobacteria_phage	1.1e-193	71.4
AYW18548.1\|1521812_1522418_+	hypothetical protein	NA	NA	NA	NA
AYW18549.1\|1522414_1522609_+	hypothetical protein	NA	NA	NA	NA
AYW18550.1\|1522605_1522857_+	hypothetical protein	NA	NA	NA	NA
AYW18551.1\|1523009_1523276_+	hypothetical protein	A0A291LBJ5	Klebsiella_phage	3.2e-28	66.7
AYW18552.1\|1523377_1523680_+	hypothetical protein	M1F1F4	Cronobacter_phage	1.2e-15	48.5
AYW18553.1\|1523648_1524089_+	DUF2591 domain-containing protein	J7I4M3	Pseudomonas_phage	1.6e-08	32.2
AYW18554.1\|1524128_1524740_+	hypothetical protein	Q5G8U6	Enterobacteria_phage	3.4e-41	48.5
AYW18555.1\|1524736_1524967_+	hypothetical protein	NA	NA	NA	NA
AYW18556.1\|1525429_1525684_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.7e-10	43.9
AYW18557.1\|1525814_1526588_+	hypothetical protein	K7P7E4	Enterobacteria_phage	1.5e-17	40.1
AYW18558.1\|1526748_1526928_+	hypothetical protein	NA	NA	NA	NA
AYW18559.1\|1526908_1527358_+	DUF1367 family protein	A0A2R2Z328	Escherichia_phage	2.0e-54	69.1
AYW18560.1\|1527956_1528127_+	protein ninF	NA	NA	NA	NA
AYW18561.1\|1528119_1528371_+	hypothetical protein	C6ZR59	Salmonella_phage	2.6e-16	60.6
AYW18562.1\|1528363_1528987_+	hypothetical protein	A0A2I7RAC0	Vibrio_phage	3.1e-42	49.7
AYW18563.1\|1529035_1529215_+	hypothetical protein	NA	NA	NA	NA
AYW18564.1\|1529214_1529400_+	hypothetical protein	NA	NA	NA	NA
AYW18565.1\|1529746_1530568_+	antitermination protein	A0A0M4RTW7	Salmonella_phage	5.5e-87	60.1
AYW18566.1\|1531139_1531355_+	hypothetical protein	NA	NA	NA	NA
AYW18567.1\|1531790_1532087_+\|holin	holin	NA	NA	NA	NA
AYW18568.1\|1532073_1532370_+	hypothetical protein	NA	NA	NA	NA
AYW18569.1\|1532377_1532920_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	4.3e-72	72.5
AYW18570.1\|1532916_1533132_+	hypothetical protein	NA	NA	NA	NA
AYW18571.1\|1533128_1533677_+	hypothetical protein	S4TP37	Salmonella_phage	1.6e-18	35.9
AYW18572.1\|1533944_1534664_+	KilA-N domain-containing protein	I6R9D7	Salmonella_phage	8.2e-55	79.1
AYW18573.1\|1534934_1535633_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
AYW18574.1\|1536202_1536388_+	hypothetical protein	NA	NA	NA	NA
AYW22239.1\|1536628_1537027_+	ubiquitin carboxyl-hydrolase	Q716H4	Shigella_phage	2.4e-40	72.6
AYW18575.1\|1537019_1538312_+\|terminase	PBSX family phage terminase large subunit	A0A125RNL7	Pseudomonas_phage	3.5e-181	74.0
AYW22240.1\|1538493_1539858_+	DUF1073 domain-containing protein	H9C0V0	Aeromonas_phage	1.4e-63	35.3
AYW22241.1\|1539871_1540573_+\|head	phage head morphogenesis protein	A0A077KGU5	Edwardsiella_phage	2.0e-45	42.6
AYW18576.1\|1540574_1540673_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AYW18577.1\|1540672_1540888_+	hypothetical protein	NA	NA	NA	NA
AYW18578.1\|1540891_1541140_+	hypothetical protein	NA	NA	NA	NA
AYW18579.1\|1541190_1542657_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	8.1e-49	34.2
AYW18580.1\|1542693_1543158_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	9.2e-07	30.8
AYW18581.1\|1543231_1544251_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	7.1e-44	35.7
AYW18582.1\|1544316_1544682_+	hypothetical protein	NA	NA	NA	NA
AYW18583.1\|1544681_1545095_+	DUF4054 domain-containing protein	NA	NA	NA	NA
AYW18584.1\|1545098_1545584_+	hypothetical protein	H9C0W2	Aeromonas_phage	4.6e-09	32.1
AYW18585.1\|1545570_1545936_+	hypothetical protein	NA	NA	NA	NA
AYW22242.1\|1546050_1546503_+	hypothetical protein	A6N3B1	Burkholderia_virus	4.0e-07	32.6
AYW18586.1\|1546505_1547996_+	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	5.1e-83	38.0
AYW18587.1\|1547992_1548436_+	hypothetical protein	NA	NA	NA	NA
AYW18588.1\|1548680_1549139_+	hypothetical protein	A0A077KC08	Edwardsiella_phage	6.3e-08	31.1
AYW18589.1\|1549153_1549354_+	transglycosylase	NA	NA	NA	NA
AYW18590.1\|1549337_1551293_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	4.9e-33	59.5
AYW18591.1\|1551293_1552181_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	6.0e-23	30.8
AYW18592.1\|1552180_1552486_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	1.2e-18	45.5
AYW18593.1\|1552626_1553343_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	4.9e-23	28.8
AYW18594.1\|1553335_1553938_+	hypothetical protein	A0A077KAY0	Edwardsiella_phage	1.0e-21	34.2
AYW18595.1\|1554260_1554710_+	hypothetical protein	NA	NA	NA	NA
AYW18596.1\|1554714_1555263_-	hypothetical protein	NA	NA	NA	NA
AYW18597.1\|1555262_1555517_-	Arc family DNA-binding protein	B9UDL4	Salmonella_phage	2.0e-19	65.0
AYW18598.1\|1555602_1555764_+	Arc family DNA-binding protein	A8CG91	Salmonella_phage	2.1e-19	90.2
AYW18599.1\|1555832_1556816_+	antirepressor protein Ant	Q0H8C7	Salmonella_phage	9.8e-83	75.6
AYW18600.1\|1556935_1557181_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AYW18601.1\|1557171_1557507_+	mRNA-degrading endonuclease	NA	NA	NA	NA
AYW22243.1\|1557571_1557931_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	9.5e-20	41.1
AYW18602.1\|1557938_1559171_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.4e-110	52.6
AYW18603.1\|1559170_1559722_+	hypothetical protein	B5WZS6	Pseudomonas_phage	2.8e-39	45.3
AYW18604.1\|1559703_1560591_+	hypothetical protein	B5WZS7	Pseudomonas_phage	2.1e-39	35.1
AYW18605.1\|1560574_1561186_+	methyltransferase domain-containing protein	H2BDB7	Pseudomonas_virus	2.1e-43	45.7
AYW18606.1\|1561188_1561788_+	DUF2612 domain-containing protein	Q2NPA3	Xanthomonas_phage	1.7e-29	40.0
AYW18607.1\|1561784_1563083_+	hypothetical protein	K4HZC0	Acinetobacter_phage	2.3e-10	40.6
AYW18608.1\|1563159_1567476_+	hypothetical protein	A0A1V0E6N8	Klebsiella_phage	1.3e-30	30.7
AYW22244.1\|1567563_1567803_+	hypothetical protein	K7P7E2	Enterobacteria_phage	2.8e-15	50.0
AYW18609.1\|1567802_1568120_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.6e-23	52.5
AYW18610.1\|1568152_1569322_-	DUF4102 domain-containing protein	I6R0M2	Salmonella_phage	4.0e-208	88.6
AYW18611.1\|1569649_1570579_-	hypothetical protein	E7DYY8	Enterobacteria_phage	7.2e-136	83.1

DBSCAN-SWA_3

1849359 : 1861636

Enterobacteria_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYW18847.1\|1849359_1850766_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
AYW18848.1\|1850988_1852053_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.0e-105	55.0
AYW18849.1\|1852079_1852949_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	7.5e-111	66.7
AYW18850.1\|1852980_1853871_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	33.2
AYW18851.1\|1853885_1854440_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.0e-52	58.2
AYW18852.1\|1854621_1855788_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
AYW18853.1\|1856469_1856664_-	hypothetical protein	NA	NA	NA	NA
AYW18854.1\|1856732_1857737_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	29.2
AYW18855.1\|1858250_1858535_+	hypothetical protein	NA	NA	NA	NA
AYW18856.1\|1858814_1860230_+	mannose-1-phosphate guanylyltransferase	A0A1V0SH58	Hokovirus	1.2e-52	30.6
AYW18857.1\|1860253_1861636_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	4.2e-31	25.8

DBSCAN-SWA_4

3041773 : 3047021

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYW19906.1\|3041773_3042034_-	hypothetical protein	A0A077SK33	Escherichia_phage	4.6e-40	96.5
AYW19907.1\|3042328_3043189_+	LEN family class A beta-lactamase	A0A077SL40	Escherichia_phage	8.7e-144	89.9
AYW19908.1\|3043206_3043968_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.6e-133	98.8
AYW19909.1\|3044228_3045131_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.1e-157	98.7
AYW19910.1\|3045142_3046408_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.4e-229	97.4
AYW19911.1\|3046400_3047021_+	aldolase	A0A077SK32	Escherichia_phage	9.7e-113	97.6

DBSCAN-SWA_5

3574902 : 3634243

Klebsiella_phage(45.45%)

tRNA,capsid,tail,holin,portal,terminase,head,integrase

attL 3583145:3583160|attR 3639875:3639890

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYW20383.1\|3574902_3575172_-	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	4.6e-27	79.7
AYW22340.1\|3575105_3575339_-	hypothetical protein	I6RSM4	Salmonella_phage	2.8e-20	80.4
AYW20384.1\|3575868_3576021_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AYW20385.1\|3576175_3577672_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	8.9e-128	65.1
AYW20386.1\|3577733_3588950_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	49.3
3583145:3583160	attL	NA	NA	NA	NA
AYW22341.1\|3589012_3589603_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	4.3e-78	76.0
AYW20387.1\|3589654_3590068_-	hypothetical protein	G8C7Q7	Escherichia_phage	2.9e-52	67.9
AYW20388.1\|3590109_3590820_-	peptidase P60	Q6UAW4	Klebsiella_phage	8.5e-137	90.7
AYW20389.1\|3590821_3591577_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	7.9e-125	80.5
AYW20390.1\|3591573_3591912_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	6.4e-58	89.3
AYW20391.1\|3591911_3595247_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	87.7
AYW20392.1\|3595246_3595459_-	hypothetical protein	Q6UAW9	Klebsiella_phage	3.7e-32	88.9
AYW20393.1\|3595479_3595845_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AYW20394.1\|3595902_3596364_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AYW20395.1\|3596395_3596797_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
AYW20396.1\|3596793_3597183_-	hypothetical protein	Q6UAX2	Klebsiella_phage	2.8e-57	85.3
AYW20397.1\|3597163_3597502_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
AYW20398.1\|3597498_3597816_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AYW20399.1\|3597796_3598057_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.6e-21	60.5
AYW20400.1\|3598115_3599402_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.4e-216	89.3
AYW20401.1\|3599479_3600400_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	1.4e-147	87.9
AYW20402.1\|3600436_3601696_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	6.2e-223	90.0
AYW20403.1\|3601695_3601875_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AYW20404.1\|3601868_3603590_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
AYW20405.1\|3603589_3604024_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AYW20406.1\|3604272_3604704_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.3
AYW20407.1\|3604700_3605018_-	hypothetical protein	NA	NA	NA	NA
AYW20408.1\|3604969_3605332_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AYW20409.1\|3605659_3606196_+	hypothetical protein	NA	NA	NA	NA
AYW20410.1\|3606253_3606493_-	hypothetical protein	NA	NA	NA	NA
AYW22342.1\|3606559_3607042_-	DUF2514 domain-containing protein	NA	NA	NA	NA
AYW20411.1\|3607074_3607605_-	lysozyme	G9L6J6	Escherichia_phage	3.6e-84	83.2
AYW20412.1\|3607582_3607819_-\|holin	holin	A5LH82	Enterobacteria_phage	4.0e-27	82.6
AYW20413.1\|3608572_3608803_-	hypothetical protein	Q8SBE1	Shigella_phage	1.3e-06	68.8
AYW20414.1\|3608871_3610254_-	ATP-binding protein	NA	NA	NA	NA
AYW20415.1\|3610585_3611188_-	hypothetical protein	H9C175	Pectobacterium_phage	3.8e-77	68.6
AYW20416.1\|3611204_3612236_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-95	49.3
AYW20417.1\|3612235_3612439_-	hypothetical protein	NA	NA	NA	NA
AYW20418.1\|3612435_3612828_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AYW20419.1\|3612868_3613159_-	hypothetical protein	H6WRY6	Salmonella_phage	1.4e-16	60.9
AYW20420.1\|3613170_3613404_-	DinI family protein	K7PM44	Enterobacteria_phage	6.4e-25	71.1
AYW20421.1\|3613805_3614102_-	hypothetical protein	NA	NA	NA	NA
AYW20422.1\|3614170_3615502_-	voltage-gated chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.8e-42	35.7
AYW20423.1\|3615836_3616481_-	leucine efflux protein LeuE	NA	NA	NA	NA
AYW20424.1\|3616646_3617141_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYW20425.1\|3617460_3618915_-	glycosyl hydrolase family protein	A0A0B5JD41	Pandoravirus	4.1e-29	25.8
AYW22343.1\|3618917_3620255_-	PTS EIIC subunit	NA	NA	NA	NA
AYW20426.1\|3620356_3621103_-	transcriptional regulator, RpiR family protein	NA	NA	NA	NA
AYW20427.1\|3621083_3622049_-	C4-dicarboxylate transporter	NA	NA	NA	NA
AYW20428.1\|3622102_3623605_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AYW20429.1\|3623801_3624242_-	PerC family transcriptional regulator	NA	NA	NA	NA
AYW20430.1\|3624255_3624720_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-62	70.2
AYW20431.1\|3624712_3625696_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	1.9e-46	57.1
AYW20432.1\|3625747_3626302_-	hypothetical protein	NA	NA	NA	NA
AYW20433.1\|3626304_3626520_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
AYW20434.1\|3626621_3627011_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
AYW20435.1\|3627625_3627844_+	hypothetical protein	NA	NA	NA	NA
AYW20436.1\|3627853_3628048_+	DUF1482 family protein	NA	NA	NA	NA
AYW20437.1\|3628090_3628435_+	transcriptional regulator	NA	NA	NA	NA
AYW20438.1\|3628661_3628940_+	3'-5' exoribonuclease	A0A2I7RDR9	Vibrio_phage	1.2e-22	59.2
AYW20439.1\|3628992_3629238_+	excisionase	NA	NA	NA	NA
AYW20440.1\|3629218_3630346_+\|integrase	integrase	O21925	Phage_21	9.7e-119	58.4
AYW20441.1\|3630463_3631714_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AYW20442.1\|3631954_3632605_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AYW20443.1\|3632621_3633080_+	NUDIX hydrolase	NA	NA	NA	NA
AYW22344.1\|3633136_3634243_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
3639875:3639890	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3876754 : 3886202

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYW20650.1\|3876754_3878476_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	4.5e-14	34.0
AYW20651.1\|3878515_3879220_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYW20652.1\|3879571_3879790_+	translation initiation factor IF-1	NA	NA	NA	NA
AYW20653.1\|3879908_3882188_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	3.7e-165	42.0
AYW20654.1\|3882218_3882536_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AYW20655.1\|3882861_3883083_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AYW20656.1\|3883149_3885090_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.7e-38	41.0
AYW20657.1\|3885086_3886202_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection