CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	0 crisprs	RT	0	0	2	0
CP033697	Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	1	0
CP033699	Yersinia pestis strain FDAARGOS_601 chromosome, complete genome	6 crisprs	DEDDh,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	4	11	18	4
CP033698	Yersinia pestis strain FDAARGOS_601 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12344 : 71452

Salmonella_phage(87.72%)

transposase,integrase,capsid,terminase

attL 19741:19755|attR 32596:32610

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX22242.1\|12344_13367_-\|transposase	IS110 family transposase IS1618	NA	NA	NA	NA
AYX22243.1\|13835_15044_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX22244.1\|15047_15239_+	hypothetical protein	NA	NA	NA	NA
AYX22245.1\|15392_16316_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYX22246.1\|16625_17402_+	chaperone protein caf1M	NA	NA	NA	NA
AYX22247.1\|17426_19928_+	F1 capsule-anchoring protein	NA	NA	NA	NA
19741:19755	attL	NA	NA	NA	NA
AYX22248.1\|20008_20521_+	F1 capsule antigen	NA	NA	NA	NA
AYX22351.1\|21280_22384_+\|integrase	integrase	A0A1P8DTG6	Proteus_phage	5.2e-24	30.9
AYX22249.1\|22378_22765_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYX22250.1\|23032_23245_+	hypothetical protein	NA	NA	NA	NA
AYX22251.1\|23953_24976_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22252.1\|24972_25755_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX22253.1\|27776_29012_+	porphyrin biosynthesis protein	J9Q733	Salmonella_phage	3.0e-238	99.3
AYX22254.1\|29014_29218_+	hypothetical protein	J9Q6I7	Salmonella_phage	8.0e-32	98.5
AYX22255.1\|29192_32717_+	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	99.2
32596:32610	attR	NA	NA	NA	NA
AYX22256.1\|32713_33157_+	hypothetical protein	J9Q7S4	Salmonella_phage	7.8e-72	100.0
AYX22257.1\|33186_33750_-	DNA-binding protein	J9Q7G7	Salmonella_phage	2.2e-63	64.6
AYX22258.1\|33822_34074_-	hypothetical protein	NA	NA	NA	NA
AYX22259.1\|34252_34726_+	hypothetical protein	J9Q6I8	Salmonella_phage	2.9e-72	98.6
AYX22260.1\|34845_35874_+	regulator	J9Q7Z3	Salmonella_phage	1.3e-165	98.5
AYX22261.1\|35934_36879_+	exonuclease	J9Q7S6	Salmonella_phage	1.3e-180	99.0
AYX22262.1\|36878_37145_+	hypothetical protein	J9Q7G8	Salmonella_phage	1.6e-40	100.0
AYX22263.1\|37147_38224_+	recombinase	J9Q736	Salmonella_phage	1.2e-203	99.4
AYX22264.1\|38314_38515_+	hypothetical protein	J9Q6J0	Salmonella_phage	1.1e-25	97.0
AYX22265.1\|38518_39349_+	SPFH/Band 7/PHB domain protein	J9Q7Z4	Salmonella_phage	9.3e-127	98.6
AYX22266.1\|39502_39874_+	DUF2591 domain-containing protein	J9Q7S7	Salmonella_phage	4.0e-61	87.8
AYX22267.1\|39951_40734_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX22268.1\|40730_41753_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22269.1\|41822_42227_+	hypothetical protein	J9Q7G9	Salmonella_phage	1.7e-70	97.7
AYX22270.1\|42294_42570_+	hypothetical protein	J9Q738	Salmonella_phage	1.7e-45	95.6
AYX22271.1\|42610_42790_+	hypothetical protein	J9Q6J1	Salmonella_phage	5.8e-18	86.4
AYX22272.1\|42786_43122_+	hypothetical protein	J9Q7Z5	Salmonella_phage	5.2e-52	91.0
AYX22273.1\|43121_43334_+	hypothetical protein	J9Q7S8	Salmonella_phage	6.8e-34	95.7
AYX22274.1\|43284_43467_-	hypothetical protein	NA	NA	NA	NA
AYX22275.1\|43902_44967_-	replication protein RepA	J9Q7H0	Salmonella_phage	2.4e-188	98.6
AYX22276.1\|45711_46356_+	hypothetical protein	J9Q739	Salmonella_phage	1.8e-122	98.1
AYX22277.1\|46431_46578_+	hypothetical protein	NA	NA	NA	NA
AYX22278.1\|47633_47906_-	hypothetical protein	NA	NA	NA	NA
AYX22279.1\|47815_48004_-	hypothetical protein	NA	NA	NA	NA
AYX22280.1\|48152_49238_+	exonuclease SbcCD subunit D	J9Q7S9	Salmonella_phage	7.7e-206	98.6
AYX22281.1\|49234_49459_+	hypothetical protein	J9Q7H1	Salmonella_phage	8.5e-27	94.9
AYX22282.1\|49467_51384_+	exonuclease	J9Q741	Salmonella_phage	0.0e+00	98.6
AYX22283.1\|51373_52120_+	hypothetical protein	J9Q6J5	Salmonella_phage	4.1e-134	96.4
AYX22284.1\|52132_52702_+	hypothetical protein	J9Q7Z7	Salmonella_phage	5.8e-104	100.0
AYX22285.1\|52910_53369_+\|transposase	IS200/IS605 family transposase IS1541B	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	5.0e-13	35.3
AYX22286.1\|53478_53706_-	hypothetical protein	NA	NA	NA	NA
AYX22287.1\|53790_54441_-	hypothetical protein	J9Q754	Salmonella_phage	4.1e-114	99.5
AYX22288.1\|54763_55291_-	transcriptional regulator	J9Q6L0	Salmonella_phage	6.4e-81	98.0
AYX22289.1\|55295_55718_-	hypothetical protein	J9Q806	Salmonella_phage	4.1e-62	85.0
AYX22290.1\|55777_56056_-	hypothetical protein	J9Q7T9	Salmonella_phage	4.4e-41	97.8
AYX22291.1\|56058_57618_-	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.1e-293	99.0
AYX22292.1\|57682_58381_+	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	9.6e-125	98.7
AYX22293.1\|58380_59049_+	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	9.5e-114	98.2
AYX22294.1\|59045_59684_+	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	4.7e-110	98.1
AYX22295.1\|59676_59931_+	hypothetical protein	J9Q7U0	Salmonella_phage	2.0e-40	97.6
AYX22296.1\|59927_60827_+	hypothetical protein	J9Q7I6	Salmonella_phage	8.2e-169	99.7
AYX22297.1\|60836_61103_+	hypothetical protein	J9Q757	Salmonella_phage	1.3e-42	100.0
AYX22298.1\|61298_61940_+	DNA-binding protein	J9Q6D4	Salmonella_phage	1.2e-108	98.1
AYX22299.1\|61942_63199_+\|terminase	terminase	J9Q7Y2	Salmonella_phage	1.8e-251	100.0
AYX22300.1\|63217_64807_+	hypothetical protein	J9Q7R1	Salmonella_phage	4.2e-301	99.2
AYX22301.1\|64829_65663_+	hypothetical protein	J9Q7F4	Salmonella_phage	5.8e-137	91.3
AYX22302.1\|65689_66565_+\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	8.5e-163	99.7
AYX22303.1\|66639_67302_+	Ig domain-containing protein	J9Q6D6	Salmonella_phage	8.5e-107	97.2
AYX22304.1\|67345_67780_+	hypothetical protein	J9Q7Y3	Salmonella_phage	3.1e-73	99.3
AYX22305.1\|67779_68613_+	hypothetical protein	J9Q7R2	Salmonella_phage	2.9e-152	99.6
AYX22306.1\|68710_69055_+	hypothetical protein	J9Q7F6	Salmonella_phage	1.9e-57	100.0
AYX22307.1\|69045_69519_+	hypothetical protein	J9Q711	Salmonella_phage	8.9e-82	99.4
AYX22308.1\|69520_69904_+	hypothetical protein	J9Q6D8	Salmonella_phage	1.1e-66	98.4
AYX22309.1\|69978_70725_+	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	5.2e-129	98.8
AYX22310.1\|70784_71102_+	hypothetical protein	J9Q7R3	Salmonella_phage	6.0e-50	98.1
AYX22311.1\|71182_71452_+	hypothetical protein	J9Q7F7	Salmonella_phage	8.4e-37	100.0

DBSCAN-SWA_2

76078 : 93324

Salmonella_phage(50.0%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX22312.1\|76078_76414_+\|tail	phage tail protein	J9Q6E1	Salmonella_phage	1.1e-57	96.4
AYX22313.1\|76470_77202_+\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	5.7e-136	99.1
AYX22314.1\|77194_77992_+\|tail	phage tail protein	J9Q7R4	Salmonella_phage	1.4e-156	96.2
AYX22315.1\|77979_78567_+\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	5.1e-103	92.8
AYX22316.1\|78582_83220_+	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	88.6
AYX22352.1\|83237_83855_+	DUF4376 domain-containing protein	Q9LA61	Enterobacterial_phage	3.0e-29	38.8
AYX22317.1\|83887_86824_+\|tail	phage tail protein	J9Q6E3	Salmonella_phage	4.6e-11	33.1
AYX22318.1\|86820_87033_+	hypothetical protein	NA	NA	NA	NA
AYX22319.1\|87125_87734_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.8e-64	62.2
AYX22320.1\|87867_88650_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX22321.1\|88646_89669_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22322.1\|89792_91802_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	7.7e-26	30.3
AYX22323.1\|91874_92105_-	DUF905 domain-containing protein	NA	NA	NA	NA
AYX22324.1\|92454_92688_+	hypothetical protein	NA	NA	NA	NA
AYX22325.1\|92817_93324_-	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	1.1e-08	29.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033697

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

40566 : 63537

Enterobacteria_phage(50.0%)

protease,integrase,transposase

attL 40061:40074|attR 53948:53961

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
40061:40074	attL	NA	NA	NA	NA
AYX17998.1\|40566_41535_-\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
AYX17999.1\|42034_42583_+	hypothetical protein	NA	NA	NA	NA
AYX18000.1\|43059_43173_+	conjugal transfer protein TraT	NA	NA	NA	NA
AYX18001.1\|43180_43810_+	complement resistance protein TraT	NA	NA	NA	NA
AYX18002.1\|45074_45200_-\|integrase	integrase	NA	NA	NA	NA
AYX18003.1\|45821_46988_+	plasmid-partitioning protein SopA	Q7Y3Y6	Yersinia_phage	3.5e-196	85.3
AYX18028.1\|46987_47950_+	ParB/RepB/Spo0J family plasmid partition protein	Q7Y3Y7	Yersinia_phage	3.1e-89	56.6
AYX18029.1\|48060_48330_-	hypothetical protein	NA	NA	NA	NA
AYX18004.1\|49211_49454_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
AYX18005.1\|49446_49746_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AYX18006.1\|49885_50545_-	hypothetical protein	NA	NA	NA	NA
AYX18007.1\|50738_51131_+	YopE regulator	NA	NA	NA	NA
AYX18008.1\|51940_53113_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.6e-220	95.4
AYX18009.1\|53886_54312_+	CesT family type III secretion system chaperone	NA	NA	NA	NA
53948:53961	attR	NA	NA	NA	NA
AYX18010.1\|54235_54424_-	hypothetical protein	NA	NA	NA	NA
AYX18011.1\|54459_55559_-\|transposase	IS3-like element ISYpe1 family transposase	S5WIU1	Leptospira_phage	1.4e-45	38.5
AYX18012.1\|55658_55988_-	hypothetical protein	NA	NA	NA	NA
AYX18013.1\|56126_56591_-	hypothetical protein	NA	NA	NA	NA
AYX18014.1\|56609_57161_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	5.9e-77	80.3
AYX18015.1\|57324_59640_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	5.0e-279	51.5
AYX18016.1\|61928_62228_-	hypothetical protein	NA	NA	NA	NA
AYX18017.1\|62251_62521_-	hypothetical protein	NA	NA	NA	NA
AYX18018.1\|62589_63048_+	conjugal transfer protein TraI	NA	NA	NA	NA
AYX18019.1\|63219_63537_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP033699

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CRISPR-Cas detection and classification

Crispr_ID: CP033699_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_1

593465-593577

Orphan

Consensus_repeat	Method
CTTCACTCGGCTGCTCAAATGTGCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033699_1

>merge|CP033699|1|593465-593577|CRISPRCasFinder
CTTCACTCGGCTGCTCAAATGTGCTTTGGACGTCAACAACCCATTCAAAATCAAAAACGTATTAAAAGCCTAAGGATGATGGTCTGGCTTCACTCGCTGCTCAAATGTGCTTT

>CP033699|1|1|593465-593577|CRISPRCasFinder
CTTCACTCGGCTGCTCAAATGTGCTTT	GGACGTCAACAACCCATTCAAAATCAAAAACGTATTAAAAGCCTAAGGATGATGGTCTG
GCTTCACTCGCTGCTCAAATGTGCTTT

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX18512.1\|589713_590106_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
CP033699.1\|AYX18515.1\|591230_592253_+\|IS21-family-transposase-IS100	unknown	unknown	gnl\|CDD\|226950
CP033699.1\|AYX18524.1\|607886_609215_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
CP033699.1\|AYX22015.1\|599593_600367_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239782
CP033699.1\|AYX18525.1\|609279_610083_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|223880
CP033699.1\|AYX18519.1\|598420_599425_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
CP033699.1\|AYX18511.1\|589387_589708_-\|primosomal-replication-protein-N	unknown	unknown	gnl\|CDD\|235071
CP033699.1\|AYX18514.1\|590472_591174_-\|esterase	unknown	unknown	gnl\|CDD\|182555
CP033699.1\|AYX18513.1\|590119_590398_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX18522.1\|605219_605837_+\|heme-acquisition-hemophore-HasA	unknown	unknown	gnl\|CDD\|368907
CP033699.1\|AYX18521.1\|602505_604998_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273807
CP033699.1\|AYX18517.1\|593996_596633_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
CP033699.1\|AYX22014.1\|591133_591217_+\|glutathione-S-transferase	unknown	unknown	unknown
CP033699.1\|AYX18523.1\|606002_607811_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
CP033699.1\|AYX18520.1\|600533_601907_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179883
CP033699.1\|AYX18518.1\|597006_598176_-\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|235346
CP033699.1\|AYX18508.1\|588009_588468_-\|IS200/IS605-family-transposase-IS1541B	unknown	unknown	gnl\|CDD\|224854
CP033699.1\|AYX18509.1\|588663_589116_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
CP033699.1\|AYX18510.1\|589155_589383_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
CP033699.1\|AYX18516.1\|592249_593032_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX18512.1\|589713_590106_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.10042e-54
CP033699.1\|AYX18515.1\|591230_592253_+\|IS21-family-transposase-IS100	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.49492e-79
CP033699.1\|AYX18524.1\|607886_609215_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.16318e-105
CP033699.1\|AYX22015.1\|599593_600367_+\|acetylglutamate-kinase	gnl\|CDD\|239782	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).	2.92616e-136
CP033699.1\|AYX18525.1\|609279_610083_+\|energy-transducer-TonB	gnl\|CDD\|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	1.51188e-39
CP033699.1\|AYX18511.1\|589387_589708_-\|primosomal-replication-protein-N	gnl\|CDD\|235071	PRK02801, PRK02801, primosomal replication protein N; Provisional.	4.24836e-69
CP033699.1\|AYX18514.1\|590472_591174_-\|esterase	gnl\|CDD\|182555	PRK10566, PRK10566, esterase; Provisional.	1.45098e-159
CP033699.1\|AYX18522.1\|605219_605837_+\|heme-acquisition-hemophore-HasA	gnl\|CDD\|368907	pfam06438, HasA, Heme-binding protein A (HasA). Free iron is limited in vertebrate hosts, thus an alternative to siderophores has been developed by pathogenic bacteria to access host iron bound in protein complexes. HasA is a secreted hemophore that has the ability to obtain iron from hemoglobin. Once bound to HasA, the heme is shuttled to the receptor HasR, which releases the heme into the bacterium.	9.51098e-102
CP033699.1\|AYX18521.1\|602505_604998_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	8.20794e-132
CP033699.1\|AYX18517.1\|593996_596633_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
CP033699.1\|AYX18519.1\|598420_599425_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
CP033699.1\|AYX18523.1\|606002_607811_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
CP033699.1\|AYX18520.1\|600533_601907_+\|argininosuccinate-lyase	gnl\|CDD\|179883	PRK04833, PRK04833, argininosuccinate lyase; Provisional.	0
CP033699.1\|AYX18516.1\|592249_593032_+\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	6.46206e-178
CP033699.1\|AYX18508.1\|588009_588468_-\|IS200/IS605-family-transposase-IS1541B	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.50747e-46
CP033699.1\|AYX18509.1\|588663_589116_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	2.38148e-68
CP033699.1\|AYX18510.1\|589155_589383_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	3.62531e-36
CP033699.1\|AYX18518.1\|597006_598176_-\|acetylornithine-deacetylase	gnl\|CDD\|235346	PRK05111, PRK05111, acetylornithine deacetylase; Provisional.	0

>CP033699.1|AYX18516.1|592249_593032_+|AAA-family-ATPase
MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
>CP033699.1|AYX18515.1|591230_592253_+|IS21-family-transposase-IS100
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>CP033699.1|AYX22014.1|591133_591217_+|glutathione-S-transferase
MVGNVTNGAIVIHTQRLKSDPGGNLLS
>CP033699.1|AYX18514.1|590472_591174_-|esterase
MWITIAPFVTLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISPDADMHGARFNGNETQRLSHFWEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMTALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREISQQAFERRLAPLADYELTHQLEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRAGSDFFTQYL
>CP033699.1|AYX18513.1|590119_590398_-|hypothetical-protein
MGLIEPSKNSFGNLVMILLVNLAKNSLVSTITGNEQKMRFKLAHRHNRNKSPAVLEFPTAHKYSYASFFSRTQTRSLPPWAAVDPIRRLNNP
>CP033699.1|AYX18512.1|589713_590106_-|30S-ribosomal-protein-S6
MRHYEIVFMVHPDQSEQVPGMIERYSATITNAAGTIHRLEDWGRRQLAYPINKLHKAHYVLLNVEAPQEAIDELETNFRFNDAVIRSMVMRVKHAVTEASPMVKAKDERRERHDFASEANDDSEAGDSEE
>CP033699.1|AYX18511.1|589387_589708_-|primosomal-replication-protein-N
MVTTNRLVLSGTVCKTPVRKVSPSGIPHCQFVLEHRSTQQEAGFSRQTWCRMPIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD
>CP033699.1|AYX18510.1|589155_589383_-|30S-ribosomal-protein-S18
MARYFRRRKFCRFTAEGVVEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARCIKRARYLSLLPYTDRHQ
>CP033699.1|AYX18509.1|588663_589116_-|50S-ribosomal-protein-L9
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNVEFFEARRAELEAKLADVLAAAEARATKINELVSVTISSKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTAGEHEVHFQVHSDVFAKLNVVVVPEA
>CP033699.1|AYX18508.1|588009_588468_-|IS200/IS605-family-transposase-IS1541B
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK
>CP033699.1|AYX18517.1|593996_596633_-|phosphoenolpyruvate-carboxylase
MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTLQNLSNDELLPVARAFSQFLNLTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQDMRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQLDHNDLADYERNKIMRRLRQLVAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAVPIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRELAGGEEVLEPYRQLMKNVRTQLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQSLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTRHTDAIAELTRYLGLGDYESWSESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPSDVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKEWIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAWTQNRLMLPAWLGAGAGLQRAIDAGKQDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG
>CP033699.1|AYX18518.1|597006_598176_-|acetylornithine-deacetylase
MKMKLPPFIELYRALIATPSISAADSALDQSNEALINLLAGWFADLGFRVEIQPVPDTRHKFNLLASIGENENGEGHGGLLLAGHTDTVPYDEGRWTRDPFTLTEHDHKLYGLGTADMKGFFAFILDAVRDIDASKLTKPLYILATADEETTMAGARYFAANTQLRPDFAIIGEPTSLQPVRAHKGHISNAIRITGQSGHSSDPARGVNAIDLMHESITQLMALRTTLQERYHNPAFTIPYPTMNFGHINGGDAANRICACCELHMDIRPLPGLTLSDLNELMTEALEPVSQRWPGRLSIDELHPPIPGYECPTDHHMVGVIEKLLGERTAVVNYCTEAPFIQQVCPTLVLGPGSINQAHQPDEFIDMAFIEPTRELIGQLVDHFCQQK
>CP033699.1|AYX18519.1|598420_599425_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSDLHPQLKGILDLPLQPLVDVAQAAKGIDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGFEHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQLALKPLVDGQLLNDAQWPVINAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGILATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHLIIVATEDNLLKGAAAQAVQCMNIRFGFPETQSLL
>CP033699.1|AYX22015.1|599593_600367_+|acetylglutamate-kinase
MNPLVIKLGGVLLDSEEALERLFTALVTYREKHERPLVIMHGGGCLVDELMKRLALPVVKKNGLRVTPADQIDIITGALAGTANKTLLAWAVKHQINAVGLCLADGNTVTVTLLDAELGHVGKAQPGSAALVQTLLAAGYMPIISSIGITVEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAQKAEQLIAQGIITDGMVVKVNAALDAARSLGRPVDIASWRHSEQLPALFNGVPIGTRISV
>CP033699.1|AYX18520.1|600533_601907_+|argininosuccinate-lyase
MALWGGRFSQAADQRFKQFNDSLRFDYRLAEQDIIGSVAWSKALVTVGVLNADEQQQLEQALSVLLEEVQANPHAILASDAEDIHSWVETKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKFQITELQTAVQQLQQALVMTAEANQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLSRDESRLQDTLKRLDVSPLGCGALAGTAYAIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSDASIGMVHLSRFAEDLIFFNSGEAAFVDLSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMTMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCKEAAEQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKALEALALSDLQQFSSVIGDDVYPILALQSCLDKRVAKGGVSPQQVASAIAEAKARLF
>CP033699.1|AYX18521.1|602505_604998_+|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MDNIIRDKKTIISVNKITTCILFALVTQGYSGQLAANTAETPTNNNDMALDKLNVEGKGNAHDSDWIYDEPRSVSEITREQLDNRPARHAADILEQTPGVYSSVSQQDPGLSINIRGIQDYGRVNMNIDGMRQNFMKSGHGQRNGSMYIDPEILSNVVIERGIFNGIGGAGAIGGIATFNTINASDFLAPEKELGGHIRAMTGDNGTRFIGSGALALGNPNGDILLAVSERNLKDYWPGNKGVLAGLRLYSPTRNVGDDLKNTKTLFTGYKMRSQLAKVGWNFEAGQRLEFSYLQTQIASPNASMLSEVLALSPSGKEITKIGWRNTSFTNVENRNIALDYRLNPEHISWLDATAKIYYVDTNDETDNANSLFKEYFWTQTRLKTRGLQLQNTNTFTPSDAHQIRLKYGLEWFSDKSEGYSTRKLIERTTPPGKRAITSTFAQLNYEYDDWLRLEGGLRYDQFRLKGNTWLHTRSFLQPYTFENPCDRRIHEQSEKPGSRCSSRRPATMRWDVDRCEQQLSPTLAMGVKPGLEWLEFFGSYGKSWRPPAMTEVLATGTAHGYSWVLPNPFVAAERARTWEAGFNIQQSNLFIEDDHFAAKVAYFDTRIANYINLELGKAKPKFGGDSFTDVAYVNNLLKTRFRGLEYQLSYDAGTFYTNINYTRMIGVNNVCSPYAWLGGLQSVKYKYVGKVEQIYAVENEVANNYVTCMNANVLFGSSAYLPGDRGSLTLGSRIFDRRLDFGTVIRYNKGYQDRSAQDENGNPLTAYVADWPKYIVYDLYASYKVTNNLILRSSIENITNRAYLVNYGDTLSFAPSRGRTIQGGFEYKF
>CP033699.1|AYX18522.1|605219_605837_+|heme-acquisition-hemophore-HasA
MSTTIQYNSNYADYSISSYLREWANNFGDIDQAPAETKDRGSFSGSSTLFSGTQYAIGSSHSNPEGMIAEGDLKYSFMPQHTFHGQIDTLQFGKDLATNAGGPSAGKHLEKIDITFNELDLSGEFDSGKSMTENHQGDMHKSVRGLMKGNPDPMLEVMKAKGINVDTAFKDLSIASQYPDSGYMSDAPMVDTVGVVDCHDMLLAA
>CP033699.1|AYX18523.1|606002_607811_+|type-I-secretion-system-permease/ATPase
MESCKTPGASSVPPTILSVLAGNKKILWGIGLFTAVINLLMLAPAIYMLQVYDRVLASANTMTLLMLTVLVLGVFVFIGLLEWVRSAVVIRLGTQIDMQLNQPVFNAAFAANLKGHNTPAAQALNDLTVLRQFATGNALFAFFDAPWFPLYLLVIFLLHPWLGMLAAAGAGILVVLAWLNQWICKKPLHDASIITSHATQQANANLRNADVIEAMGMLKALRERWLMQHANFLYQQNLASDKSSRVTAVAKSSRQALQSMMLGLGALLVIYNEITAGVMIAGSILIGRVLGPIDQLIAVWKQWSHARLAYQRLSQLLAQHPSSPTGMVLPAPQGKLNVTQLMACKPGTHIPVLHSINFELQPGDVLGILGPSGSGKSTLAKLLVASQPTFSGTVRLDSADLSRWDKTQLGEFIGYLPQNIQLFRGTVAENIARFGAIDTAKVVAAAQLADVHDLILHLPQGYDTPLGDDGEGLSGGQRQRIALARAMYGIPRLIVLDEPNASLDKEGEQALLASIIQLKQQGCTIVMITHKPELLSGSDYLLFLKNGQMDLFDRTQAVLQNIQGKDKPAVQPEAKILNSRSGWSNGVSYGIGPARTTSSPKP
>CP033699.1|AYX18524.1|607886_609215_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MLPESVCYSVANANRQPPLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQSNLFQQQLDSVQLLAKDGHIAKNKLLEMESQSTSLQARVEQSTSDIAEAHKLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALAQHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPRLQGSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELAIRPGMAVDVFIRTGERSLLSYLFKPFTDRLHLALAEE
>CP033699.1|AYX18525.1|609279_610083_+|energy-transducer-TonB
MNRLQQSSDKLIFWLVGALLACGIHIYALWWLSTASIPAIPTSYPAAIMMELSAEPEFMQNLPQNSVVGITQNIIEPAVEQRVNQPDDIVDLPTLPEQPEGQREITRKEPIKVKRPAENRATSRKPVNKETQESDSKQSSPAAAASAMLSGTSQQVAAAVNSDSSHRQQAQVSWKSRLQGHLMGFKRYPSSARKQQQQGTAMIRFVVDKNGYVSSVQLSHSSGTSALDREALAIIKRAQPLPKPPAELLSQGQITLSLPVDFNLKRK

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Crispr_ID: CP033699_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_2

1343380-1343501

Orphan

Consensus_repeat	Method
CTTAATGCCAATATTAATCGACATAATCAATTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033699_2

>merge|CP033699|2|1343380-1343501|CRISPRCasFinder
CTTAATGCCAATATTAATCGACATAATCAATTGTAGTGGAGGGGGAGGATTGAGTTTTTTCCAAAAAAACATATTGCAGTATTAAATCTCTTAATGCCAATATTAATCGATATAATCAATTG

>CP033699|2|2|1343380-1343501|CRISPRCasFinder
CTTAATGCCAATATTAATCGACATAATCAATTG	TAGTGGAGGGGGAGGATTGAGTTTTTTCCAAAAAAACATATTGCAGTATTAAATCT
CTTAATGCCAATATTAATCGATATAATCAATTG

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX19148.1\|1346129_1346876_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187594
CP033699.1\|AYX19145.1\|1342380_1343127_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180440
CP033699.1\|AYX19137.1\|1331678_1332143_-\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|179969
CP033699.1\|AYX19144.1\|1339809_1342227_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366708
CP033699.1\|AYX19147.1\|1344853_1346137_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
CP033699.1\|AYX19143.1\|1335834_1336164_-\|sulfurtransferase-TusE	unknown	unknown	gnl\|CDD\|225472
CP033699.1\|AYX19152.1\|1349598_1350387_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
CP033699.1\|AYX19138.1\|1332321_1333002_-\|DUF2057-family-protein	unknown	unknown	gnl\|CDD\|179619
CP033699.1\|AYX19154.1\|1350951_1351200_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|180851
CP033699.1\|AYX19141.1\|1334220_1335411_-\|ribosomal-RNA-large-subunit-methyltransferase-I	unknown	unknown	gnl\|CDD\|185082
CP033699.1\|AYX19140.1\|1333842_1334160_-\|heat-shock-protein-HspQ	unknown	unknown	gnl\|CDD\|184526
CP033699.1\|AYX19139.1\|1333317_1333734_+\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
CP033699.1\|AYX19153.1\|1350425_1350914_+\|lipocalin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372819
CP033699.1\|AYX22053.1\|1344405_1344864_+\|beta-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|223835
CP033699.1\|AYX19146.1\|1343755_1344076_+\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX19150.1\|1348122_1348842_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
CP033699.1\|AYX19151.1\|1348834_1349596_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|235936
CP033699.1\|AYX19142.1\|1335504_1335783_+\|acylphosphatase	unknown	unknown	gnl\|CDD\|184675
CP033699.1\|AYX19136.1\|1329563_1331618_+\|DNA-helicase-IV	unknown	unknown	gnl\|CDD\|182930
CP033699.1\|AYX19149.1\|1346891_1348130_+\|hydroxymethylglutaryl-CoA-synthase-family-protein	unknown	unknown	gnl\|CDD\|225959

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX19145.1\|1342380_1343127_-\|SDR-family-oxidoreductase	gnl\|CDD\|180440	PRK06172, PRK06172, SDR family oxidoreductase.	1.01866e-70
CP033699.1\|AYX19137.1\|1331678_1332143_-\|methylglyoxal-synthase	gnl\|CDD\|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	2.55286e-93
CP033699.1\|AYX19144.1\|1339809_1342227_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366708	pfam01565, FAD_binding_4, FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.	1.41205e-31
CP033699.1\|AYX19147.1\|1344853_1346137_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	2.93328e-136
CP033699.1\|AYX19143.1\|1335834_1336164_-\|sulfurtransferase-TusE	gnl\|CDD\|225472	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism].	2.4785e-71
CP033699.1\|AYX19152.1\|1349598_1350387_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.49415e-40
CP033699.1\|AYX19138.1\|1332321_1333002_-\|DUF2057-family-protein	gnl\|CDD\|179619	PRK03641, PRK03641, DUF2057 family protein.	4.09411e-122
CP033699.1\|AYX19154.1\|1350951_1351200_+\|acyl-carrier-protein	gnl\|CDD\|180851	PRK07117, PRK07117, acyl carrier protein; Validated.	4.77778e-09
CP033699.1\|AYX19141.1\|1334220_1335411_-\|ribosomal-RNA-large-subunit-methyltransferase-I	gnl\|CDD\|185082	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI.	0
CP033699.1\|AYX19140.1\|1333842_1334160_-\|heat-shock-protein-HspQ	gnl\|CDD\|184526	PRK14129, PRK14129, heat shock protein HspQ; Provisional.	3.64231e-72
CP033699.1\|AYX19139.1\|1333317_1333734_+\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.53332e-71
CP033699.1\|AYX19153.1\|1350425_1350914_+\|lipocalin-like-domain-containing-protein	gnl\|CDD\|372819	pfam13924, Lipocalin_5, Lipocalin-like domain. This family includes domains distantly related to lipocalins. However, they do contain the important GXW motif in the first strand. The protein in this family include aln5, which is involved in biosynthesis of alnumycin. The family also includes the ZFK protein from Trypanosoma brucei which is a protein kinase. This domain is at the C-terminus of that protein. The domain is also found as the C-terminal domain in StiJ a protein involved in producing stigmatellin. This domain has been assumed to catalyze a final cyclisation reaction.	2.03213e-45
CP033699.1\|AYX19136.1\|1329563_1331618_+\|DNA-helicase-IV	gnl\|CDD\|182930	PRK11054, helD, DNA helicase IV; Provisional.	0
CP033699.1\|AYX19148.1\|1346129_1346876_+\|SDR-family-oxidoreductase	gnl\|CDD\|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	3.53e-68
CP033699.1\|AYX19150.1\|1348122_1348842_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.17502e-35
CP033699.1\|AYX19151.1\|1348834_1349596_+\|enoyl-CoA-hydratase	gnl\|CDD\|235936	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated.	7.57936e-134
CP033699.1\|AYX19142.1\|1335504_1335783_+\|acylphosphatase	gnl\|CDD\|184675	PRK14426, PRK14426, acylphosphatase; Provisional.	1.02172e-54
CP033699.1\|AYX22053.1\|1344405_1344864_+\|beta-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|223835	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism].	2.85579e-42
CP033699.1\|AYX19149.1\|1346891_1348130_+\|hydroxymethylglutaryl-CoA-synthase-family-protein	gnl\|CDD\|225959	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism].	1.57028e-141

>CP033699.1|AYX19145.1|1342380_1343127_-|SDR-family-oxidoreductase
MKKTILITGALSGIGNTATKLFSEMGYNVVFSGRRPEEGRVILDDLKRINKDVLYVNADMNSESDIKHLIEMTLERFGSLDVAVNCAGTVGETAEIQAVTQDNFHLVFNTNVLGTLLAMKYQIPVMVERGKGSIINISSIAGLVGLPSTGIYVASKHAIEGLTKTAALEVATTGVRINSISPGPVEGKMFDRFLGHDENNKKAFIEMMPNKRFTTQEEVAHTIVFLAEDNVTAITGQTITIDGGYTAQ
>CP033699.1|AYX19144.1|1339809_1342227_-|GNAT-family-N-acetyltransferase
MTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLARDEGRLIALVPLYLQEFRSADPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDPSLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNGLNINYMVDKFSIELDAFPDFDSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYWPESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLGVSAVYRYAFEKGINLIECGRLNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLASQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAATEADVIRTIVFAKERGMEVSVRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFPTGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAARGAGPCSFFVVTRFYLSCYSLPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVSPPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLTALAINQPSNFETIYEQFSSMVVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFVSTYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQRLRLEYDPDGVFVDVQQLEEHGDQPGANN
>CP033699.1|AYX19143.1|1335834_1336164_-|sulfurtransferase-TusE
MLEFEGRIIDTDAQGYLKNSTDWSEALAPVLAEQEGITLTEPHWEVVRFVRAFYQEFNTSPAIRMLVKAMAQKYGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI
>CP033699.1|AYX19142.1|1335504_1335783_+|acylphosphatase
MSKIYIVAYVYGVVQGVGFRYSTQRQAQQLGVTGYAKNCDDGSVEVVASGNPQAVERLMEWIRQGGPRGARVDRLLTEPYPPTPFETFSIRY
>CP033699.1|AYX19141.1|1334220_1335411_-|ribosomal-RNA-large-subunit-methyltransferase-I
MTVRLILAKGREKSLLRRHPWIFSGAVQRLEGDALSGETIDILDSQGKWLARAAYSPESQILARVWTFQQDEVIDCAFFIRRLQQAQNWRDWLAQRDGLNGYRLIAGESDGLPGITIDRFQNFLVLQLLSAGAEYQRETLVSALQHCYPECSIYDRSDVSVRKKEGLPLTQGLICGEMPPALLPISENGMQLFVDIQQGHKTGFYLDQRDSRLAARNYANGRRVLNCFSYTGAFAVAALMGNCQQVISVDTSQSVLDIAKQNIELNQLDLSKTEFVRDDVFQLLRSYRAQGEKFDLIIMDPPKFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPVDLFQKILADAALDAGHDIQFIEQFRQAADHPVIAAYPEGLYLKGFACRVM
>CP033699.1|AYX19140.1|1333842_1334160_-|heat-shock-protein-HspQ
MIASKFGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLRSSPWYHVVIEDDDGQPVHTYLAEAQLTYEDVDAHPEQPSLDELAASIRHQLQAPHLRN
>CP033699.1|AYX19139.1|1333317_1333734_+|CoA-binding-protein
MHDKDIADILKKVKTIALVGASDIPSRPSYRVMAYLLQQGYQVTPVNPKLAGELLLGQLVYAELADIPHAIDMVDVFRNSDAAYCIAQDAIAIGAKVLWLQIGVINEQAAILATDAGLQVVMDRCPKIELPRLGLEKG
>CP033699.1|AYX19138.1|1332321_1333002_-|DUF2057-family-protein
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQILFKVIKPLPTDPLVLYSSPPLIVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDNGHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPAFAAIPPSPVSAVPGTTIPVAGVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH
>CP033699.1|AYX19137.1|1331678_1332143_-|methylglyoxal-synthase
MELTTRTIAARKHIALVSHDHCKKSLLAWVMENRDLLAQHELYATGTTGNLVQKATGIDVHCLLSGPMGGDQEVGALISEKKIDILIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNRSTADFLIGSTLFSSEVTIAIPDYDRYMQQRLDLK
>CP033699.1|AYX19136.1|1329563_1331618_+|DNA-helicase-IV
MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFELPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWFKRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTARMLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEALPEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDSQARRALLIQHWQQQCSEKKAQAKGWREWLTDELEWDVADGDFWQDKRLAARLASRLERWVGLMRMYGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVNLLEKGRFVSPWKHVLVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAELSLTTAFSEHFGEGAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMILPDEQLEALLDKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQQADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLLQDTARPSIFVSQLSELGALVQRKP
>CP033699.1|AYX19146.1|1343755_1344076_+|hypothetical-protein
MMVRATCCCIYGVCGTRDYSLFIDYVYKSIPAHEMYLLQQIELCPDQILHAWKISQNPQVSEVFEIEVVSSEEDAEEAVLFWKAYFSSLGETVIDGRHVGDTFSRF
>CP033699.1|AYX22053.1|1344405_1344864_+|beta-hydroxyacyl-ACP-dehydratase
MNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYPGVLQQESMFQTALILMYFLLNETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCCITEYDTFLATAIVQITVNDQIVTVGKGEFHVF
>CP033699.1|AYX19147.1|1344853_1346137_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MSSDRIVITGVAINTPIGDTLDLVGNNLLSGKSAIGYWRNFDTSNIYSKIGGQIPEYDIEGKLHAFSNRIPDIVLSRAEKVFKQTTKGVQLSVLMAMEAWLDAGLFEHIIDPFDCGIICGGHNLSDKYLLDQQKIFSDEPEFIDAFSGLNSLDTDHSSSVAQVLNTKGFAYLVGGTCATGNIAIQTAINAIKVDKKQVVAVVCPMASFHPMMLHSLTILEAICYSQYQDTPTKASRPYDINRSGFLPSEGGAVLIFEQAEHAKNRGAKIYAELLGASVNSDANHLGDPSHEGQVRVIQDVLKKCNISPEQVDYVSAHATSTKLGDIVELKSIKRVFGSHAEKLIINAPKSLLGHTMWASGVVEAAIAIWQMRQGEFHQSHNIETLDPAVELNVCASGNVKKEVNIFLNNSFGMGGINSASLFSRYHG
>CP033699.1|AYX19148.1|1346129_1346876_+|SDR-family-oxidoreductase
MVNMNLFISGGASGIGRSVVIAALSKGWNVGFSYHNNKEGAQQLLDIAVAEFPRQLCRAYQLDVIDSGAVEYVGDRLLVDFSNIDAVVCNAGIDLPGNLVSMTDEDWALVLNTNLTGTFYLIRYFLPLFLANKYGRIVTLSSLAKDGSSGQAAYAASKAGLVGLTKTTAKEYGHFGITANVVVPGLINTEIIGDDIKGIKNFFAQYAPVGRLGSPSEVAEAILFLVAKESSYVNGAVFNVTGGIDWVY
>CP033699.1|AYX19149.1|1346891_1348130_+|hydroxymethylglutaryl-CoA-synthase-family-protein
MNSIGIEKISIYPSSLALKLSELAQARGGDNKYIQESLMVIKRSLVPQWEDAVTLAVNSAKDMLNDQDRSDIGLFIIATESGLDQEKAISTWAHRYLGLPATCRVFELKSACHAGAAALKMAESWISSGLNRGKKVLLINVDISNNMICHGKMEYSLGAGAIALLISDNPVFAVIETGKSGIHTHEVTDVIRPLPWKEVAFDVEASLFSYMDGLENAFEEYCHQTPEARESTYFNYNLYHVPFPGISKEAHKVLLELQGLFGKEALATSFKQKVMPSLYYAQKIGATYCGSIFLSLFSLMVKAPEIKSGDRIGVYSYGSGSCAEYFSMQVGDQAVEIAQQQGAALDILLTQRKILDVAAYEQLENARSAQMQGKDYRLDGDNLQDWYTHHYSGSGLLILERIDNHLRRYRYA
>CP033699.1|AYX19150.1|1348122_1348842_+|enoyl-CoA-hydratase/isomerase-family-protein
MHEYVTVPIKFSPDSLADFENRFISALNDERYKVIVLIGGPTYFSMGMDLTYISTHYDADFVSQFCHILKMVRNSHKPVLAKVEGNVIAGGLALLSVVDFILSSDSASFSLPEVTFGITPTIAMSCLLERIRPHHLKYFVWSSSVISAKQALKWGLIDQINTLENLDQDIQVISNKLSRIPKSAIRESKLLLAEQYSFEESLDLGSHLLVERLNDAQTIEKIRHYLEDIKLFNDEYADD
>CP033699.1|AYX19151.1|1348834_1349596_+|enoyl-CoA-hydratase
MTNMKKIYLRKSDEGIAFMHINDPVNKNAIDDEFCLQLHGIVDTIKQDKTIKVLILVGLPDIFCTGGTEAFLQSLITHYKTNIEHEYANHLKHFLNIPIPVIAAMEGSATGGGLVLGLYADILVAAEESRYGMSFMNMGFTPGMGSTAMSKEAFGYYTGFEMMVTGNYIRGSELKGKCCFNYILPRAMVMEKAIELATSIAEKPRHSLELLKKYMSIDRRKMLEETSTIEAFMHHIAFNQSNIEQQIQDNYTG
>CP033699.1|AYX19152.1|1349598_1350387_+|SDR-family-oxidoreductase
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVFLQADISDEEITTQLIEKIAQENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLITYIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKAVLETLTKYIGARENIIINCISPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDNGRMFTDNFTKWIDMIETNFIEK
>CP033699.1|AYX19153.1|1350425_1350914_+|lipocalin-like-domain-containing-protein
MTTWYFHCILTKKVLVMSNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTEDIRAIPSEQIVADFPKFETYCGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEKLVLKSIDSLLLNDESWLFELVWNKQE
>CP033699.1|AYX19154.1|1350951_1351200_+|acyl-carrier-protein
MDRDHIASIVKKHIVNSIDGAKEHEIDLQKSMADYGASSLDIVSVVSGVMRELKIKIPRTELKNIKSINGLIDLFVTSSSES

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Crispr_ID: CP033699_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_3

1470417-1470624

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGCACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRT

3 spacers

DEDDh

The CRISPR arrays of CP033699_3

>merge|CP033699|3|1470417-1470624|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGCACAGGCAGCTTAGAAAATGTTCGACGATTTATTTTATTTGTATTTCAGGTTCACTGCCGCACAGGCAGCTTAGAAAATTTATTAAAGATGCTGACAAAAAGAACTTAAGTTCACTGCCGCACAGGCAGCTTAGAAAGTCAACGCTTCACTCCCTGCGCGGGGTATAACGTTCACTGCCGCACAGGCAGCCCAATAA

>CP033699|3|1|1470417-1470564|PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATGTTCGACGATTTATTTTATTTGTATTTCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTATTAAAGATGCTGACAAAAAGAACTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA

>CP033699|3|3|1470417-1470624|CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATGTTCGACGATTTATTTTATTTGTATTTCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTATTAAAGATGCTGACAAAAAGAACTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTCAACGCTTCACTCCCTGCGCGGGGTATAAC
GTTCACTGCCGCACAGGCAGCCCAATAA

>CP033699|3|1|1470417-1470624|CRT
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATGTTCGACGATTTATTTTATTTGTATTTCAG
GTTCACTGCCGCACAGGCAGCTTAGAAA	ATTTATTAAAGATGCTGACAAAAAGAACTTAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	GTCAACGCTTCACTCCCTGCGCGGGGTATAAC
GTTCACTGCCGCACAGGCAGCCCAATAA

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX19242.1\|1468530_1469922_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
CP033699.1\|AYX19243.1\|1470658_1472089_-\|exodeoxyribonuclease-I	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236979
CP033699.1\|AYX19251.1\|1482916_1483759_+\|FAA-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
CP033699.1\|AYX19252.1\|1483790_1485068_+\|L-fuconate-dehydratase	unknown	unknown	gnl\|CDD\|239440
CP033699.1\|AYX19238.1\|1465153_1465843_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
CP033699.1\|AYX19249.1\|1481278_1481704_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
CP033699.1\|AYX19250.1\|1482128_1482869_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187626
CP033699.1\|AYX19241.1\|1468325_1468541_+\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX19240.1\|1466979_1468071_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570
CP033699.1\|AYX19239.1\|1465800_1466694_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
CP033699.1\|AYX19246.1\|1474617_1475826_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|225865
CP033699.1\|AYX19236.1\|1462500_1463328_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187576
CP033699.1\|AYX19235.1\|1460895_1461795_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
CP033699.1\|AYX19244.1\|1472351_1473491_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187547
CP033699.1\|AYX19248.1\|1479869_1481270_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
CP033699.1\|AYX19247.1\|1475788_1478941_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
CP033699.1\|AYX19245.1\|1473924_1474242_+\|DUF496-family-protein	unknown	unknown	gnl\|CDD\|180070
CP033699.1\|AYX22058.1\|1462077_1462125_-\|his-operon-leader-peptide	unknown	unknown	unknown
CP033699.1\|AYX19237.1\|1464161_1465157_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
CP033699.1\|AYX19234.1\|1459560_1460892_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX19242.1\|1468530_1469922_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	3.72025e-45
CP033699.1\|AYX19251.1\|1482916_1483759_+\|FAA-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	8.96038e-107
CP033699.1\|AYX19252.1\|1483790_1485068_+\|L-fuconate-dehydratase	gnl\|CDD\|239440	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
CP033699.1\|AYX19238.1\|1465153_1465843_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	1.76633e-90
CP033699.1\|AYX19249.1\|1481278_1481704_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	4.29941e-57
CP033699.1\|AYX19245.1\|1473924_1474242_+\|DUF496-family-protein	gnl\|CDD\|180070	PRK05423, PRK05423, DUF496 family protein.	5.26004e-59
CP033699.1\|AYX19240.1\|1466979_1468071_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0
CP033699.1\|AYX19243.1\|1470658_1472089_-\|exodeoxyribonuclease-I	gnl\|CDD\|236979	PRK11779, sbcB, exonuclease I; Provisional.	0
CP033699.1\|AYX19246.1\|1474617_1475826_+\|IS256-family-transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.39969e-152
CP033699.1\|AYX19236.1\|1462500_1463328_+\|SDR-family-oxidoreductase	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.54107e-68
CP033699.1\|AYX19235.1\|1460895_1461795_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	6.63843e-161
CP033699.1\|AYX19244.1\|1472351_1473491_+\|NAD(P)H-binding-protein	gnl\|CDD\|187547	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs. SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.4093e-61
CP033699.1\|AYX19248.1\|1479869_1481270_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.14634e-76
CP033699.1\|AYX19239.1\|1465800_1466694_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	3.90601e-98
CP033699.1\|AYX19250.1\|1482128_1482869_+\|SDR-family-oxidoreductase	gnl\|CDD\|187626	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs. Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P).	1.05065e-117
CP033699.1\|AYX19247.1\|1475788_1478941_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	1.47456e-126
CP033699.1\|AYX19237.1\|1464161_1465157_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.22935e-72
CP033699.1\|AYX19234.1\|1459560_1460892_-\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0

>CP033699.1|AYX19242.1|1468530_1469922_+|APC-family-permease
MAHDATVAVGTNQTGTNNRVQLRKTLTLVQVVMMGLAYLQPMTIFDTFGIVSGLTDGHVATSYAIALIAVLFTAVSYGKLVKRFPSAGSAYTYAQKSISPNVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVGALVSLMTLFNLRGINIVANLNSVIVVVQVAIMVVFMGLLIHGVYQGEGAGTLVSARPFYSENAHLVPMITGATILCFSFLGFDGISSLSEETPNAGKVIPKAIFLTALIGGIIFIAVSYCLQLYFPDISRFTDPEASQPEIMLFVAGKFFQSVILCFSCVTVLASGMAAHAGVSRLLYVMGRDGVFPEKVFGYVHPKWRTPAINVLLVGGVALSAISFDLVTATALINFGALVAFTFVNLSVIAQFYVRERRNSTFKDHFNYLILPMIGAGTVGVLWVNLESSSMTLGLVWGAIGLSYMVWKTRAFRRALPQFTEEPAQL
>CP033699.1|AYX19241.1|1468325_1468541_+|hypothetical-protein
MGQLFILAPVPTGMRCTCSDYGAAGMANTRYTALISPLTYPRQIRSFPVTFNRCETFANRVEGMGRLNHGA
>CP033699.1|AYX19240.1|1466979_1468071_+|oxidoreductase
MSANAIRVQVGPANYFSFPGAIDKLSEFYPQAALDKALWIYGERALAAAQDYLPKAFHGPQAVRAKFSTHCSQSTVADLVSAAGGDRQVVIGIGGGAVLDTAKVVARQLGVPLVAIPTIAATCAAWTPLSVWYNEAGQALNFEIFNDANHLVLVEPRIMLHAPVEYLLAGIGDTLAKWYEAVVLSPQPETLSLTVRLGLQAALEIRNVLLKQSEAALQAVAQGELTQDFLDVVDAIIAGGGMVGGLGERYTRVAAAHAVHNGLTLLPQTEHFLHGTKVAYGILVQTALLGQDEVLRSLIVAFNQLGLPTHLAALDVDINDREAIDRVIGRILKPGESIHYLPIALNSEKVWAAIEQVEIAAQH
>CP033699.1|AYX19239.1|1465800_1466694_-|sugar-ABC-transporter-ATP-binding-protein
MSSIPPSRLEMRNISISFSGFHALQEVDFTLEGGSTHALIGANGAGKSTLMAILSGAHNHYRGEIFIDGQPIDIHSPRQARQHGIHVVQQEVDVALIPTLSVAENIMLDELADRGHLFNWPQLYRQAEALLEQLELKLNVRQRLESCTLAEKQQVLLARALSHQCRFLILDEPTAPLDQEESARLFRVVRRLQSEGIGIVFISHRIHELREVCDQLTVLRDGRRVSHDTMEGMSGEQIVEKMLGHTLEDISPLGERQSAAKHGCRKHYCRKHCYRSAAYMISISCAISPSHYIRAKF
>CP033699.1|AYX19238.1|1465153_1465843_-|sugar-ABC-transporter-ATP-binding-protein
MRDISLTLHQGEILGIAGLAGAGKTELCKALFGDTPSTLERGELSGKAWRPRSPDRSVAQGLALVPEERRKEGIFIDEGIPMNLSVAADDSFSRWSLFSRRQELSWAKELIERLGIRTSSPQQKLAHLSGGNQQKVAIGKWLRGDAQVLIFDEPTKGVDIKAKQDLFSLIDQLAQQGKGIIYASGEFSELVGLCDRICVLWDGRIVAELNAAEVDEETLLLFSTGGTPQ
>CP033699.1|AYX19237.1|1464161_1465157_-|ABC-transporter-permease
MSKELPLPDVQPWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGGFDLSVGSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQVPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLAALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVPYYAMDIIKGLVLAMALALTYIQKR
>CP033699.1|AYX19236.1|1462500_1463328_+|SDR-family-oxidoreductase
MKKVAIIGLGWLGMPLAQSLSRRGIDVVGSKTTPDGVDAARMSGINCYPLVLTPELICEPDDLAQLMAVDALVITLPASRTTAGGDHYFQAVQQVVDSALAFGVPRIIFTSSTSVYGETRGRIKESSPLQPVTVAGKTLMALEQWLHQLPHTSVDILRLAGLVGTDRHPGRFLAGKTGVKGGSQGVNLVHQEDVIAAIELLLNRPKGGHLYNLCAPIHPRKRDFYPACARALQLTPPEFAVEEQEGANREIDGSKICSELGFEYLYPDPSRMPLN
>CP033699.1|AYX22058.1|1462077_1462125_-|his-operon-leader-peptide
MNRVQFNHHHHHHPD
>CP033699.1|AYX19235.1|1460895_1461795_-|ATP-phosphoribosyltransferase
MLDKTRLRIAMQKSGRLSDESQELLSRCGIKINLQQQRLIAFAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGDDPRYFTLRRLDFGGCRLSLAAPLDAEYTGPQCLQDTRIATSYPHILKQYLDKQGVRFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMSVDKQQLIDRLMTRIQGVIQARESKYIMMHAPSERLDEIITLLPGAERPTILPLAGDKSRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME
>CP033699.1|AYX19234.1|1459560_1460892_-|histidinol-dehydrogenase
MQPTNFNTLINWQQCSEEQQKALLSRPAINASERITAAVSDILDRVKAEGDSALRDFSQRFDHVQVADIRITASEIAAASARLSDDVKHAMAQAVRNIEIFHNAQKMPVVDVETQPGVRCQQITRPIASVGLYIPGGSAPLPSTVLMLGTPARIAGCQRVVLCSPPPIADEILYAAQLCGIQEVFQIGGAQAIAAMAFGSESVPKVHKIFGPGNAYVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPAFIAADLLSQAEHGPDSQVILLTPDAAIAQAVAVEVEQQLALLSRADIARQALESSRLIVTNDLQQCIDISNAYGPEHLILQIRQPEEIIDQIDNAGSVFMGDWSPESAGDYASGTNHVLPTYGYTSTYSSLGLADFVKRMTVQQLTPQGLLGLASTIETLAQAEQLTAHKNAVTLRVTALNNALTAVNKE
>CP033699.1|AYX19243.1|1470658_1472089_-|exodeoxyribonuclease-I
MSDKNKQPTFYVHDYETFGQRPALDRPAQFAGVRTDLDFNLVEEPLVIYCKPADDYLPQPEAVMITGITPQHALANGVNEAEFSRQIHQAFSVPGTCILGYNNIRFDDEVSRNIFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANGVEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSGMFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQESAIPIKLVHINKCPVLAPAKTLLPENADRLGIDRQRCLQNLQLLRQNPQVREKVVALFAQAEPFAVTDDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFRFRARNYPNTLNDSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYEDDKEKLALLKALFEYAKGLVS
>CP033699.1|AYX19244.1|1472351_1473491_+|NAD(P)H-binding-protein
MTKNKTGSETLKKLLLTGATGFLGGAVLEKLLLASSDFNYLLLVRANTPEQGLMRIRENLEKFYLPNELINKININHVLLGDLAEPDSFINDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKRMAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHLVEYTKSKSAIECLLAEHCPTLPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLYILEYPNLPDDIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLKGIFGPCNERLMLKAMRLYGSFAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTIQQQMAVDFK
>CP033699.1|AYX19245.1|1473924_1474242_+|DUF496-family-protein
MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEEVQAIIANMRGDYEDRVDDYIIKNADLSKERRELSKKLKAMGEVK
>CP033699.1|AYX19246.1|1474617_1475826_+|IS256-family-transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
>CP033699.1|AYX19247.1|1475788_1478941_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MSLYRISSLHQAKQLNKNKQLNKTRISKSVVWANIVIQAIFPLSIAFTPAVMAAETVGASDEKPRSASQAEQSTANAATRLASILTNDDSAKQASSIARGTAANAGNEALQKWFNQFGSAKVQLNLDEKLSLKGSQLDVLLPLTDSPDLLTFTQLGGRYIDDRVTLNVGLGQRHFFAQQMLGYNLFIDHDASYSHTRIGVGAEYGRDFINLAANGYFGVSGWKNSPDLDKYDEKVANGFDLRSEAYLPTLPQLGGKLIYEQYFGDEVGLFGVDNRQKNPLAVTLGVNYTPIPLFTVGVDHKMGRAGMNDTRFNLGFNYAFGTPLTHQLDSDAVAIKRSLMGSRYNLVDRNNQIVMKYRKQNRVTLELPARVSGAARQTMPLVANATAQQGIDRLEWEASALTLAGGKITGSGNNWQITLPSYLSGGEGNNTYRISAIAYDTLGNASPVAYSDLVVDSHGVNTNASGLTAAPEILPANASASSVIEFNIKDNANQPITGIADELAFSLELVELPEELAKAKARSVPLKTVSHTLTKITESAPGIYQATLTSGSKPQLINITAQINGVPLADVQTKVTLIADESTATLQTSSLQIITNGSLADDTDANQIRAVVVDAYGNKLSGVQVNFTVGNNAKITETTLSDKQGGVTAAITSTKAGTYTVTAELNGVTQQIDVNFIPDAGTATLDDSDEYKLQWVTNGQVADGESTNSVQLTVVDKFGNTVPGVDVAFTTDIGAIISEVTPTDANGVATAKIISSQAKSHTVKATLNRKEQTVEVNFIADTATAEITANNFTVEVDGQVAGSGTNQVQALVVDKKGNPVANMTVNFTATNGVVVETTSAKTDENGKVTTNLSMTNVGGTISTVTATMINSANVTSTQDKPVIFYPDFTKATLNTPANTYSGFNINSGFPTTGFKNTHFQLSPHGITGANSDYDWVSSHPNVSVSNTGAITLQDNPGGKVTITATWKHDSSKVFTYDFTLNYWVGLYSSTNLSWAQANASCINAGMRLPTNREVSAGQDVRGVGSLLSLSIILCNCHRIKGDRSGGHRTR
>CP033699.1|AYX19248.1|1479869_1481270_+|MFS-transporter
MTQISFFNALISLTFSPSRRHPLVMSLTRRSNMSNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFALGAGIFFAAYALFGIPANLMMNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLLGVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALTLGSPISGALLDMQGFLGQPGWFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAVLLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYYIPRYADRKTHRRNPIATLNLVVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFPAQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNSPPAGLITLALFSLLSATLIFSLKFWPAKATAEVI
>CP033699.1|AYX19249.1|1481278_1481704_-|thiol-disulfide-oxidoreductase-DCC-family-protein
MVSAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGHALLEWAGLPTDKINTLVLIENQQVYLRSEAIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYRLFGRYDAVRKLKADHERRFL
>CP033699.1|AYX19250.1|1482128_1482869_+|SDR-family-oxidoreductase
MNLKGKKALVTAAGQGIGFNTATLFARKGAEVIASDINIAALSNIPGITAVSLDVTDTLAINDVAQAIGPIDVLFNCAGVVHSGDILTCSEQEWQFALDLNVTAMFHMIRAFLPGMIACQQGSIINMSSVASSIKGVPNRFAYSTSKAAVIGLTRSVAADYVTQGIRCNAICPGTVESPSLRQRIAVQAHAEGRSEADVFQAFAARQPIGRIGKAEEIAQLALYLASDASAYTTGTIHIIDGGWSN
>CP033699.1|AYX19251.1|1482916_1483759_+|FAA-hydrolase-family-protein
MKLLRYGPVGEERPALLDELGEIRDLSAHIEDISGKFLLPATLYKLRQLDSASLPLVRGEQRLGACVGHVGKFICVGLNYADHAAETGAEIPQEPVIFNKWTSAIIGPNDDIEIPRNSVKTDWEVELGVVIGTGGRYIGEANAMSYVAGYCVVNDISEREFQLEHGGTWDKGKGCDTFGPIGPWLVTRDEIPDPHQLGLWLDVDGRRYQNGSTRTMIFKIPQIISYLSRFMSLQSGDVISTGTPPGVGLGQKPPVYLHAGQIMRLGIEGLGEQCQKTIQA
>CP033699.1|AYX19252.1|1483790_1485068_+|L-fuconate-dehydratase
MTIITALRTEDVRFPTSLELDGSDAMNPDPDYSAAYVILDTDNPALSGHGLTFTIGRGNEICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQLRWIGPEKGAIHLATGAVINAVWDLWSKAEGKPLWRLVADMSPEELVRCIDFRYITDCITPEEALTLLQQRAHNKALRLEKLQDEGYPCYTTSAGWLGYPDDKLRRLCQDAVDAGFDYLKLKVGRDLEDDIRRVRITREVLGPDRKLMIDANQIWETNEAIPWVNQLAFANPWFIEEPTNPDDIEGHRRIRQGVAPVKVATGEMCQNRIMFKQFIMREAIDVVQIDACRLGGVNEVLAVMLMAAKYDLPVCPHAGGVGLCEYVQHLAMIDYLCIAGTDKGRVIEYVDHLHEHFVHPCVIKNAAYMPPEQPGFSIEMHQSSIEKYRFRV

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Crispr_ID: CP033699_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_4

2685935-2686324

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRT
GTTCACTGCCGCACAGGCAGCTTAGAAAATC	PILER-CR

6 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of CP033699_4

>merge|CP033699|4|2685935-2686324|CRISPRCasFinder,CRT,PILER-CR
TTTGATTATTGCCTGTGCGGCAGTGAACTCAGGGGACTGGCGAACAATGTCTTTCATGATTTTCTAAGCTGCCTGTGCGGCAGTGAACGAAAAGGTAAGATGGGCAAGCTTCTAGTAGTTTTTCTAAGCTGCCTGTGCAGCAGTGAACATTATCTGAATGGCATTTTCTTTGGCGCAGATTTTCTAAGCTGCCTGTGCGGCAGTGAACTCGCCATTCCGTGAACCTGAGCGCGTTCGCGATTTCTAAGCTGCCTGTGCGGCAGTGAACACATCACTAGCGGTATCGAACAATTGAGCGAGTTTCTAAGCTGCCTGTGCGGCAGTGAACTCAGTCCCGTTATGGTGCTGGTGTTGCCCGTAAGTTTCTAAGCTGCCTGTGCGGCAGTGAAC

>CP033699|4|4|2685935-2686324|CRISPRCasFinder
TTTGATTATTGCCTGTGCGGCAGTGAAC	TCAGGGGACTGGCGAACAATGTCTTTCATGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT
TTTCTAAGCTGCCTGTGCAGCAGTGAAC	ATTATCTGAATGGCATTTTCTTTGGCGCAGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCGCCATTCCGTGAACCTGAGCGCGTTCGCGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACATCACTAGCGGTATCGAACAATTGAGCGAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCAGTCCCGTTATGGTGCTGGTGTTGCCCGTAAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>CP033699|4|2|2685935-2686324|CRT
TTTGATTATTGCCTGTGCGGCAGTGAAC	TCAGGGGACTGGCGAACAATGTCTTTCATGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT
TTTCTAAGCTGCCTGTGCAGCAGTGAAC	ATTATCTGAATGGCATTTTCTTTGGCGCAGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCGCCATTCCGTGAACCTGAGCGCGTTCGCGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACATCACTAGCGGTATCGAACAATTGAGCGAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCAGTCCCGTTATGGTGCTGGTGTTGCCCGTAAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>CP033699|4|2|2685992-2686262|PILER-CR
GATTTTCTAAGCTGCCTGTGCGGCAGTGAAC	GAAAAGGTAAGATGGGCAAGCTTCTAGTA
GTTTTTCTAAGCTGCCTGTGCAGCAGTGAAC	ATTATCTGAATGGCATTTTCTTTGGCGCA
GATTTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCGCCATTCCGTGAACCTGAGCGCGTTCG
CGATTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACATCACTAGCGGTATCGAACAATTGAGC
GAGTTTCTAAGCTGCCTGTGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX20283.1\|2673672_2673882_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20294.1\|2688142_2688331_+\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20290.1\|2679555_2680902_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|274203
CP033699.1\|AYX20287.1\|2677021_2677576_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|378224
CP033699.1\|AYX20291.1\|2681310_2684598_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
CP033699.1\|AYX20293.1\|2686658_2687906_+\|miniconductance-mechanosensitive-channel	unknown	unknown	gnl\|CDD\|223740
CP033699.1\|AYX20284.1\|2674005_2675364_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
CP033699.1\|AYX20297.1\|2691063_2692002_-\|DUF1861-family-protein	unknown	unknown	gnl\|CDD\|378102
CP033699.1\|AYX20292.1\|2684594_2685581_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
CP033699.1\|AYX20288.1\|2677586_2678591_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
CP033699.1\|AYX20285.1\|2675410_2675914_+\|formaldehyde-activating-enzyme	unknown	unknown	gnl\|CDD\|224708
CP033699.1\|AYX20286.1\|2675924_2676944_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
CP033699.1\|AYX20299.1\|2693230_2694055_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
CP033699.1\|AYX20298.1\|2692028_2693084_-\|glycosidase	unknown	unknown	gnl\|CDD\|350124
CP033699.1\|AYX20302.1\|2696597_2697638_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380502
CP033699.1\|AYX20289.1\|2678608_2679559_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|187807
CP033699.1\|AYX20295.1\|2688512_2689787_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20301.1\|2695039_2696326_-\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
CP033699.1\|AYX20296.1\|2689825_2690941_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20300.1\|2694055_2694931_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX20299.1\|2693230_2694055_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.72016e-69
CP033699.1\|AYX20290.1\|2679555_2680902_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|274203	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	0
CP033699.1\|AYX20287.1\|2677021_2677576_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.71931e-94
CP033699.1\|AYX20291.1\|2681310_2684598_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
CP033699.1\|AYX20293.1\|2686658_2687906_+\|miniconductance-mechanosensitive-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	2.49285e-32
CP033699.1\|AYX20284.1\|2674005_2675364_+\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.50877e-50
CP033699.1\|AYX20297.1\|2691063_2692002_-\|DUF1861-family-protein	gnl\|CDD\|378102	pfam08950, DUF1861, Protein of unknown function (DUF1861). This hypothetical protein, found in bacteria and in the eukaryote Leishmania, has no known function.	6.29599e-176
CP033699.1\|AYX20292.1\|2684594_2685581_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
CP033699.1\|AYX20288.1\|2677586_2678591_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
CP033699.1\|AYX20285.1\|2675410_2675914_+\|formaldehyde-activating-enzyme	gnl\|CDD\|224708	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy production and conversion].	1.50048e-90
CP033699.1\|AYX20286.1\|2675924_2676944_+\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	6.34333e-143
CP033699.1\|AYX20302.1\|2696597_2697638_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380502	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group includes the ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group belongs to the LacI-GalR family repressors and are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.	1.56156e-83
CP033699.1\|AYX20289.1\|2678608_2679559_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187807	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	1.12008e-157
CP033699.1\|AYX20300.1\|2694055_2694931_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.26211e-58
CP033699.1\|AYX20298.1\|2692028_2693084_-\|glycosidase	gnl\|CDD\|350124	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase. This subfamily contains the glycosyl hydrolase family 130 (GH130), as classified by the carbohydrate-active enzymes database (CAZY), enzymes that are phosphorylases and hydrolases for beta-mannosides, and includes Listeria innocua beta-1,2-mannobiose phosphorylase (Lin0857). hey possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Structure of Lin0857 shows beta-1,2-mannotriose bound in a U-shape, interacting with a phosphate analog at both ends. Lin0857 has a unique dimer structure connected by a loop, with a significant open-close loop displacement observed for substrate entry. A long loop, which is exclusively present in Lin0857, covers the active site to limit the pocket size.	9.75278e-165
CP033699.1\|AYX20301.1\|2695039_2696326_-\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	2.85244e-50

>CP033699.1|AYX20292.1|2684594_2685581_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHGNYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAALCSQVPR
>CP033699.1|AYX20291.1|2681310_2684598_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCHKRALNETRRILDQFAERKGDRTWQTAITQEGLNTLRKLLRRTARRNSAVACHWIKSNNQSELLWIVGNLRRFNAEGTVPTNTTQRDILRSQDENNWHSVETIALLAGIAGLFHDFGKANVLFQQGLQGQGKTYQPYRHEWVSLRLFQAFVEQKNDIQWLTALSQINPADETTLMSNLVKDGLDDYTNPLAALPPLAKTIAWLILSHHRLPVYPSKDYHRPPKVEEIDDWLHQQLMPVWNSTNMDSGDWREKDKLDVWRFPHGTPLQSAEWCKKAQKFAKRALRQPSLVNDGHLNQRFTSHMARLVLMLADHHYSSLPATPGWQDKNYQVFANTHNKMRDANAHSKTIEMKQRLDEHNIGVGQNALLLGRSLPHIRKTLPAITRHKGFKQRSVQEKYRWQDKAFDLAVTLRERSLQQGFFGVNMASTGCGKTFANARIMYGLSDEKQGCRFSVALGLRTLTLQTGTALQQKLTLQKDDLAVLIGSQSVLQLYQLNNDKLEPRGTGSQSADKFFSEHQYVSYDGSLDDGRLSTWLSNNDRLKRLLCAPVLVCTIDHLIPATESLRGGKQIAPMLRLLTSDLVLDEPDDFDRNDLPALCRLVNWAGMLGSRVLLSSATLPPALVQALFNAYRAGRADYQQASGQPDTPVNICCAWFDEHGVAQQDIQQSKDFIQHHGDFITRRVGKLSTAEVLRRAELIPVSSASVKNGSVLDAMAAVMRDSMLRLHQAHHQTHPSEKTVSVGVVRMANIDPLVAIAQRLYAMAAPENYRIHYCVYHSQHPLAVRSAIERRLDVTLTRYQPNALWQVAEIEHALQHHPEQHHLFVVLATSVVEVGRDHDYDWALAEPSSMRSFIQLAGRVQRHRQVAPQMANMHILQKNFKALTQKDPAIPVYCKPGFETTRCRLNTHDLDKLLLPSQYKVINAISRIQERTKLEPRDNFVDLEHLSLRLILQGSAEPLKYYAALWWRKQATWSGEQQRCTPFRQSSPDEQHNLWIDDEADKPVFKRLDSDQIEWKVSDGFQDVELTLAAGNSAWIDTDCLRIYQWLAESLNKELNEVSRQFGEVRLPKKDGERWHYHPLLGVFGALD
>CP033699.1|AYX20290.1|2679555_2680902_-|type-I-F-CRISPR-associated-protein-Csy1
MSDEGLAAFIVSYIKSREQPKLEAFDKEAEKRLAGLTQAEDIALAQQEIAQQRQELIARYEVRNWLTDAANRAGQIKLATHAPKYTHSDSKSSGILNIELQSKKKDYFSSVDLAEQASDVIGNAAVFDLVKLLQSECEGGSLIKCLEQGDNSVLKLFSNDDELVEEWTTKFKSILNNEKFTSHKLAKQFYFPVGPDQYHLLSPLFSSSLAQAMHQRIIEARFSDQSKEAKAAHKAGRWHPTVRVLYLDTAVQHIGGTKPQNISYLNSVRGGKVWLLPCGAPSWKNIQKPPIKYRSIFHDRSEFTVLARNNLWQMQLYLLGVKPLSNTMDIRAARLACCDEIIDILFNYVAEIQNLDGTNGWSDAEDCKLKRSEQLWLDPTRAMDDPVFKLEREKEDWKQEVSQDFGYWLNRWLQHDELVFGYVEQREWSSLFKQRLREFEQGSLETSS
>CP033699.1|AYX20289.1|2678608_2679559_-|type-I-F-CRISPR-associated-protein-Csy2
MSSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHYQQVHAYLSGWDYVFSLTRNPLTKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALEKHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLCRLLPGFALLDRSELLAEHLNRLRQTNPQAEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGYRAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCRCALPASVDTYLLNDEE
>CP033699.1|AYX20288.1|2677586_2678591_-|type-I-F-CRISPR-associated-protein-Csy3
MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPAKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQIDGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE
>CP033699.1|AYX20287.1|2677021_2677576_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDIRVLPDPEFSAQTLLEALFAKLHRALVATIPGRVGVSFPTAGKTLGSQLRLHGSRGDLLELQSAGWLKGLQDYCECSEILPVPADVKHRTIRRVQVKSSAQRLRRRSVSKGWLTEEQARLRIPDSHDKRCDLPFLRLKSRSSEQYFLLFIEQGTLQASATTGEFSAYGLSVNATIPWF
>CP033699.1|AYX20286.1|2675924_2676944_+|aldo/keto-reductase
MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYSAGVGEEVVGRIVKNLMSRDELVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDYIDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMFTWQLSKILWCCERNGFAKPINMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYADVTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGTDCMLVGADTIEQINSAVTALRISLNAEEHFELERNYTPCDVINDYTAGQRIAREARPPSGIFAP
>CP033699.1|AYX20285.1|2675410_2675914_+|formaldehyde-activating-enzyme
MQMYIGEGFAGNGVNAAHINIMIGPRDGVVGQAFAASLASPSQGHYPFIVVIKPNVAAKPMTLYVNKAEIRSELHGRATWGASQAAVAKAVAEALLANLFPPEAEDDWCIITANWVNIDCDDIDEVYRNNYRACTTALHAAMAKTPKRDQLTHALTQLSNPFFTPKA
>CP033699.1|AYX20284.1|2674005_2675364_+|MFS-transporter
MQTLPSEKIRMDDVPLNRFHIRIAGLTFGAHFIDGYILGLIGFALIQLKPIMALTPLWEGLLGSAALIGLFLGSLILGWISDYIGRQKIFSFSFVIITLASALQFFASTPEQLFILRVIVGIGIGGDYSVGHTLLAEFSPRKHRGVLLGAFSVIWTFGYVSASFVGHYLSMVSPEAWRWLLSSAALPALLILLVRIGTPESPRWLMGKGREDDAMAIVHKYFGPNVTLIDEEPATSTRRFLSLFGRKYWRRTAFNSLFFVCLVIPYFAIYTFLPSILNVMALSQNFATDLLLNGLLVVGALVGIVLTAFCSRRSFLISSFIFLATCLLLLSILPSNQTFWLIALFAAFTLVMSAVSNLVGVFPAESFPTEVRSMGVGFATSMSRLGSAIGTSLLPLAIVNYGMPVTTTLLAFVLIIGAIVSIAWAPETKGLTLVDASQSATTPRPPSSIIPN
>CP033699.1|AYX20283.1|2673672_2673882_-|hypothetical-protein
MVIGDLLTETDRLFQKRTAAMDDLFSSPGPVRLILFVMAMCQPKYKAASAFYAYPSEKKVRDPPLNSYK
>CP033699.1|AYX20293.1|2686658_2687906_+|miniconductance-mechanosensitive-channel
MMQQRISQWLERLGMEFSDVMSLTMVIGLILLISVMIHLVLHRVVLAALQRRGQQSQRIWQQAITKHKLFQRVALLLQGIIINLQAVLWLQNGSQTQAVIVTAAQVWIMAFALLALFSLLDTLLALLRQSSVAHQLPLRGICQGLKLVAAIFIGIMIVSLLMGRSPLLLLSGLGAMTAVLMLVFKDPILGLVAGIQLSANDMLKIGDWLEMPKYGADGAVTDIGLTTVKVRNWDNTVTTIPTYALISDSFKNWRSMSESGGRRIKRSINIDTTSVHFLSEQEQQRLTLNPLLQHYLSEKSQELNQYNQQIALDLSSPLNGRRLTNIGTLRAYLVAYLRAHLGIHQSMTLMVRQLAPTPEGLPLEVYAFTNTTIWAEYEGIQADIFDHIFAVVSEFDLRIHQTPSGNDMRSMLAKV
>CP033699.1|AYX20294.1|2688142_2688331_+|hypothetical-protein
MSSGLIVAFIKWYFKVCNTSDMVTLICDDKPYFLSLNYPIFTVPLPITTPPQSMRSPDLAAA
>CP033699.1|AYX20295.1|2688512_2689787_-|hypothetical-protein
MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ
>CP033699.1|AYX20296.1|2689825_2690941_-|hypothetical-protein
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
>CP033699.1|AYX20297.1|2691063_2692002_-|DUF1861-family-protein
MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFSEQQGQWAPVENAPTFQLQDPFFTRIEDELILGGVEINPHPDNPRQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEINNLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGVFIFNPDTKNYTPIKIIAARDNFLPGATKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
>CP033699.1|AYX20298.1|2692028_2693084_-|glycosidase
MMRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDPWDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV
>CP033699.1|AYX20299.1|2693230_2694055_-|carbohydrate-ABC-transporter-permease
MKKNINSLIIHLVMFSLALSWLYPYIWMVLSSFKQSADIYTTGLFGSAYSLDNYRFLFENSGRVEKPFLKTLFNSLFISTVVTVAVTLSSMFIGFALAKMQFKGQSLFRNLLFLQMVFPASMFIIPQFVLVRELGLLNTYSAMIVPFLMSSWGIFMISQSFQGTPNDYIHAAKIDNASLWQIMIYLMMPLNKAIIAIVALFTFVGTWDNFLWPLIVIQDESKMPLSVLLATFSKSYGVYVGPVIAGAVIQTIPIVVLFILFRKYFMQGMSLSLK
>CP033699.1|AYX20300.1|2694055_2694931_-|sugar-ABC-transporter-permease
MTFLKLKDKQVGSVLAASYLGYTSIFWFYPFIWLAVLSLTEWRFVGIPTFNGLNNFILVMQDPLFWKSMLNVMRFLMYYLPIVFISSFLFAFGLQKLKHGRTFVALSFLLANVSSGVAYSIVFSKIFSQNGPLNTFLYDWFGFTLPWLTSPDFAMLSIALVVTWKFVGYYGLILFSGLNSIPKEIYSAAELDNTRTIKRLFHITLPMINPQLIMVLVLAITVSFAIFTEPYLITGGGPLNSTTTPMIVMYETAFMKMQPSWAATMSIFIALISFGIILGVRKLLERKVEIV
>CP033699.1|AYX20301.1|2695039_2696326_-|carbohydrate-ABC-transporter-substrate-binding-protein
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWNKQPDKKKVVFSTIPAAGSSEEAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLDGYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRGDLLKEQGFSEVPKTYDEVYALSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLDFMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQQDKPHTFADGKGLVLFSHSKVKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPFFAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQMIEKTAFNTATPDEALQQSIKEVNAILKP
>CP033699.1|AYX20302.1|2696597_2697638_+|LacI-family-DNA-binding-transcriptional-regulator
MTTGKKRETLKTIAETLNVTHTTVSNVFNRPEKVSPELREKILAYAESINYHGPAGAGRFLRTGKCGTLGVIFNDNLSYVFSDRHDIALMRGIAEECEKNGINIALMPLKTNNALKKRMMGALVDGYILNATYNNDEVVQAALTSGLPVITTDIKLQNFTCVSIDDGAAMQAICHHLLAAGHKKFGIVSFPVKRLPGELTSLAEFSTDYDNGVAFGRISACITALSDAGIDLHTSYVAEQPHSETGGEKAAKALLAKEPGISAIICLSDRFAFGVYQFCQDHNIPVPGQIAITGFDDIDIQDPPVGLTTIRQPTVLKGREAARALISGQLDNDISLDFELVVRDSA

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Crispr_ID: CP033699_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_5

3299958-3300168

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAACT	CRT

3 spacers

The CRISPR arrays of CP033699_5

>merge|CP033699|5|3299958-3300168|CRISPRCasFinder,CRT
TCTATAAGCTGCCTGTGCGGCAGTGAACTCTGTACGCATACCGCCATCTTGCATCAGTCTTTTCTAAGCTGCCTGTGCGGCAGTGAACTTTACGGCACGGCGAAAGATTCGGTTCTTGTCTTTCTAAGCTGCCTGTGCGGCAGTGAACTTAACGTAGCCAGGGCGTGTGGAACATGCCTAGTTTTCTAAGCTGCCTGTGCGGCAGTGAACA

>CP033699|5|5|3299958-3300167|CRISPRCasFinder
TCTATAAGCTGCCTGTGCGGCAGTGAAC	TCTGTACGCATACCGCCATCTTGCATCAGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTTACGGCACGGCGAAAGATTCGGTTCTTGTC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTAACGTAGCCAGGGCGTGTGGAACATGCCTAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>CP033699|5|3|3299958-3300168|CRT
TCTATAAGCTGCCTGTGCGGCAGTGAACT	CTGTACGCATACCGCCATCTTGCATCAGTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAACT	TTACGGCACGGCGAAAGATTCGGTTCTTGTC
TTTCTAAGCTGCCTGTGCGGCAGTGAACT	TAACGTAGCCAGGGCGTGTGGAACATGCCTAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAACA

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX20812.1\|3299099_3299954_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
CP033699.1\|AYX20821.1\|3314230_3314803_-\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
CP033699.1\|AYX20807.1\|3290337_3291366_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
CP033699.1\|AYX20810.1\|3295307_3297254_-\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl\|CDD\|226471
CP033699.1\|AYX20814.1\|3300521_3301076_+\|DUF1440-domain-containing-protein	unknown	unknown	gnl\|CDD\|226008
CP033699.1\|AYX20805.1\|3285417_3286233_-\|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|226241
CP033699.1\|AYX20804.1\|3284912_3285215_+\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20817.1\|3308429_3309638_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|225865
CP033699.1\|AYX20819.1\|3312334_3312916_+\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20806.1\|3289180_3290314_-\|gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
CP033699.1\|AYX20811.1\|3297267_3298794_-\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	unknown	unknown	gnl\|CDD\|143404
CP033699.1\|AYX20818.1\|3311416_3311662_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
CP033699.1\|AYX20816.1\|3307517_3308396_+\|transglycosylase	unknown	unknown	gnl\|CDD\|273954
CP033699.1\|AYX20809.1\|3292973_3293903_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380623
CP033699.1\|AYX22152.1\|3313183_3313585_+\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
CP033699.1\|AYX20822.1\|3314826_3315078_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX20820.1\|3313817_3314219_+\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
CP033699.1\|AYX20808.1\|3291377_3292925_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
CP033699.1\|AYX20815.1\|3301446_3307461_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
CP033699.1\|AYX22151.1\|3286242_3287163_-\|myo-inosose-2-dehydratase	unknown	unknown	gnl\|CDD\|275172

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX20812.1\|3299099_3299954_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.17523e-68
CP033699.1\|AYX20821.1\|3314230_3314803_-\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	2.31704e-76
CP033699.1\|AYX20807.1\|3290337_3291366_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	8.15893e-97
CP033699.1\|AYX20810.1\|3295307_3297254_-\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl\|CDD\|226471	COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism].	0
CP033699.1\|AYX20814.1\|3300521_3301076_+\|DUF1440-domain-containing-protein	gnl\|CDD\|226008	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown].	4.70507e-70
CP033699.1\|AYX20805.1\|3285417_3286233_-\|5-deoxy-glucuronate-isomerase	gnl\|CDD\|226241	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism].	3.14642e-169
CP033699.1\|AYX20817.1\|3308429_3309638_+\|IS256-family-transposase	gnl\|CDD\|225865	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.39969e-152
CP033699.1\|AYX20806.1\|3289180_3290314_-\|gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.07432e-69
CP033699.1\|AYX20811.1\|3297267_3298794_-\|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
CP033699.1\|AYX20818.1\|3311416_3311662_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	5.27401e-36
CP033699.1\|AYX20816.1\|3307517_3308396_+\|transglycosylase	gnl\|CDD\|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.09445e-118
CP033699.1\|AYX20809.1\|3292973_3293903_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380623	cd19968, PBP1_ABC_IbpA-like, periplasmic sugar-binding protein IbpA of an ABC transporter and similar proteins. The periplasmic binding protein (PBP) IbpA mediates the uptake of myo-inositol by an ABC transporter that consists of the PBP IbpA, the transmembrane permease IatP, and the ABC IatA. IbpA shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge.	4.31227e-120
CP033699.1\|AYX22152.1\|3313183_3313585_+\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	5.05571e-40
CP033699.1\|AYX20820.1\|3313817_3314219_+\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	7.32611e-43
CP033699.1\|AYX20808.1\|3291377_3292925_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
CP033699.1\|AYX20815.1\|3301446_3307461_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP033699.1\|AYX22151.1\|3286242_3287163_-\|myo-inosose-2-dehydratase	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	8.43662e-165

>CP033699.1|AYX20812.1|3299099_3299954_+|MurR/RpiR-family-transcriptional-regulator
MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAERADVPPSTLIRFANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMESEAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVVGLRRSFSVAAYLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSISFSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLCFVVKEAQVDAFRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ
>CP033699.1|AYX20811.1|3297267_3298794_-|methylmalonate-semialdehyde-dehydrogenase-(CoA-acylating)
METVANFINGKCVFSCGNSVTSGSPRAQAIFNSATGEPIRQVMMSTAQETEQAITAAQQAFASWSRQAPLKRARVMFRFKSLLEQHLDALAQLISEEHGKVYSDAVGELTRGLEVVEFACGIPHLQKGEHSANVGTGVDNHSLMQPLGVCVGITPFNFPAMVPMWMFPIALATGNTFVLKPSEKDPSLAVRLAQLLTEAGLPDGVFNVVQGDKTAVDVLLTDPRVQAVSFVGSTPIAEYIYQTASAHGKRCQALGGAKNHCILMPDADMDMAASAIMGAAYGAAGERCMALSVVLAVGDETADNLCARLEQQISTLRVGPGLAQEPENDMGPLISAPHRAKVLGYIDSGVAQKATLRIDGRGLKVAGHEQGYFVGPTLFDHVTPAMTIYQEEIFGPVLSVVRIADYRSAVDLINRHEYGNGTAIFTRDGGTARRFCEEVQVGMVGVNVPIPVPVAFHSFGGWKRSIFGPLNVHGNDGVRFYTRMKTITARWPEAQHDQGAAFSMPTLG
>CP033699.1|AYX20810.1|3295307_3297254_-|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MSTVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEENPGHLQVHQGCNEQGMAHMAIGFAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLLLLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYWDRINRPEQLMSAMLSAMRVLTDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPLVVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLAPQADLVIGIGTRLTDFTTGSKALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEALTEGLAGYRTAWQGDIIEAKAAWCDECQRLWSRTWRPDEVPEVAGHLDDSLQEYAEVLNTTLTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAIGAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMGSFCTESRHRNHESGQLNGPLICVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVLLDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQMKVKRARQY
>CP033699.1|AYX20809.1|3292973_3293903_-|sugar-ABC-transporter-substrate-binding-protein
MKKLILAALIVFTSGVAFAENEQIVFSTPNLAMPFEVHMQRTAVKTAKALGVKLQVLDGQGSSPKQVADLENAITRGAQGFIVSPNDINAISSAVEEIQQAKLPVVTLDRSVESEKKVPHFGANNYKGGEAIANYVKSMFPNGAEIVLLTGQPGSSSNIERTKGIRDSLKTGGDKYRIVVDQTGNWMRSEGMRIIESVLPSLPKPPQVILSANDDMALGAIEALQSHGMKPGEIMVTGFDAVPEALARVREGWMAVTADQRPGYAVTTAMNQLVANIRDQKAITGADFLPTMITKENLDQAERVSEAGK
>CP033699.1|AYX20808.1|3291377_3292925_-|sugar-ABC-transporter-ATP-binding-protein
MSQPLLKITDMAKSFSGVWALSNVQLTLEQGEIHALLGENGAGKSTLLKALSGAQPQTHGEIWFNGEMLALDDSPVERQNKGIITIYQEVNLLPNMTVAENMFLGREPRRRQVFVDEKAVNQEAQAILDYLQLNVSPTTAVARLSIAQQQMVEIARALTLNAKLIVMDEPSAALSDSEVESLHRVVRELKGRGVSIIYVTHRLHEVFQLCDRFTVFQDGRYTGSDEVAGTNVEKIIRLMVGRDVVFNRRPASETHHQDQPIRLSVQGLCREKPPLDPHGVALKDISFHVHAGEVLGIAGLVGAGRTEVARCLFGAGAFTSGNFEIDGVPYQPRDPMFALEQGIALVPEDRKKEGAVQGLSIRDNLTLSSLAGLLQWRFFVNTRKEDQLIETYRLALQIKMVNSEQAVRKLSGGNQQKVILARCMALNPRILIVDEPTRGIDVGTKSEVHQVLFDMAKQGVAVIVISSDLPEVLAVSDRIITLSEGRVTGEIHGDDASEERLMTMMTINHNALNAA
>CP033699.1|AYX20807.1|3290337_3291366_-|ABC-transporter-permease
MLQPLSKPQASVKSAMRFDPITFFERFGVLIFMFLLLIFFQLQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAVSAMTAAYVIKGDNFTTIDPNAWGGMSWLIGLSICLAMGTLIGFLQGLGVTRLRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDAGYRWWGRGDLLGISIPIWIFAIVAIAGYLALHKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVVIGCLAGLAGFILSARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLIIVLAVAFDTYAKNRRGAL
>CP033699.1|AYX20806.1|3289180_3290314_-|gfo/Idh/MocA-family-oxidoreductase
MKEVRIGLIGTGYIGKAHAIAYAQAPTVFELRGKLVREMVAEVSPALAAQRAQAFGFNRFTCDWRELVADPAIDVVDICSPNYLHKEMALAAIHHGKHVYAEKPLALNARDASEMAAAATRAGVKTLVGFNYIKNPSAKLAKEIIERGEIGEVIHFYGTHNEDYMADPNTPIHWHCLHATAGLGALGDLAAHIVSMAQYLVGEITQVCGDLKTVVVTRPASVGSSARVAVENEDQAHAMVRFVNGAQGVIEASRVACGRKMGLSYMITGTQGAISFTQERMAELKLYLHNDPVNRQGFRTLLVGPAHPEYAAFCMAAGHGIGFNDQKTVEVRDLIDGIAMDTPLWPDFAEGWKVSRILDAIALSHQDSRWVNVTDIV
>CP033699.1|AYX22151.1|3286242_3287163_-|myo-inosose-2-dehydratase
MRKTEADRHTTAVQLGINPLTWTNDDLPSLGAETSLETCLSEGKEAGFAGFELGNKFSREAGVLGPILEHHQLKLVSGWYSGRLLERSVEEEIVAVRSHLALLRELGAKVMVFAEVSGCIHGEQQTPVHLRPRFPPARWAEYGAKLTAFARYTQALGVQIAYHHHMGTVIESAQDIDNLMIHTGEEVGLLLDTGHLTFAGADPLAVAQRWIARINHVHCKDVRTSVLADVKNRKTSFLDAVLSGVFTVPGDGGVDYPPIMALLKQHGYQGWLVVEAEQDPNVAHPMTYARMGYHNLSRLAHNAGLI
>CP033699.1|AYX20805.1|3285417_3286233_-|5-deoxy-glucuronate-isomerase
MSRLLSRRQAPDERGLTQRITPAQAGWGYVGFEVYELNEGQPLTLTAVPDERCLVLIAGRASISTPSAQFPNIGDRMSPFERHKPWAVYVTPGEAVQVQAITPLELAVCSAPGKGTYPTRLISPEDIGAEARGKGHNQRYVHNILPEDHPADSLLVVEVYTNEGASSSYPSHKHDTDNPPHETYLEETYYHRLNPEQGFCMQRVYTDDRSLDECMAVYNREVVMVPRGYHPVATMAGYDSYYLNVMAGPVRKWIFSWENDHVWINHNYPIT
>CP033699.1|AYX20804.1|3284912_3285215_+|hypothetical-protein
MQSPSNNSRAHCSKPFLYRQNQWHFNQAISEYRLPAPLSAQDLTDSVNHINMSVIKDNAIRASGTAKIMMNHRLRRTAATIKPTHIAATTGQYIIEKTMI
>CP033699.1|AYX20814.1|3300521_3301076_+|DUF1440-domain-containing-protein
MAMSEKRVNLQVIAWATIIGGFVSSLVKSGTEVNMPPRVVGEISPPAANIDAWLGWLGINSHSMDYVYQGVTISGTVVLYHWLFSFVFAFVYVLLSAYWPKVRLWYSAAYGLSITVAIHGVLIPALGFRHPAYLAGETGWLWNLNGYELWSEIIGHLCWSASLEICLVAVLAFFSKPIKGIWAN
>CP033699.1|AYX20815.1|3301446_3307461_+|alpha-2-macroglobulin-family-protein
MLCCLVFKGLLSMDLLRFLLISPFALIKGLYRLSAYLLRLVGRLLRPVVGNLNWRAPQWMTKTANGLHCAFNRSEQWVAKHPKGISAAIVLLMAAASAAFYGYHWYLNRPQPIEPAPMVYQETSIRVSAPRTVNYQAQKPEAQPLSLNFMHSAAPITAMGQVVDQGISLTPAIEGEWKWATERTLVFTPKKAWPMGANYQITIDTEKLLAPQIKLNQTELNFTTPAFAYQLEKAEYYQDPQEAQKRSTIFHVQFNAPVDVASFEKQILLGLVEGKSKSEKKLNFSVVYDEKKLNAWIHSQPLMPMDKGGSVHLSINKGVNASVAATPTTQAQNKWVSVPNLYSLAVNSINATLVESDNNNGERALIIAISDAVKDKEIKNAVKAWLLPQHNFQAKESAKTSTDFYPWDMDDIDDNLLQQSTPLALTLNEAEQEYQPIFSFKFDAPSYRTLLIEVNNSLTSVGGYKMPEKIYQIVRVPDYPKTLRFMSQGSLLSMQGDKQISVAARNMTGMKLDIKRVIPSQLQHIVSFKSSEYSSAHFNRLSDEYFTEHFQYQTALNNDNPGEINYQGVDLSRYLANNPSARRGVFLLTLSAWDPEKRDNQQHSEEDYDEDQEWVGDSRFVVITDLGIITKQSQDRSRDVFVQSIHSGLPAADAKVSVVAKNGVVLLSQITDSKGHVHFPALDAFKNERQPVMFLVEKEGDVSFLPTRATYDRNLDFSRFDIDGEETPSDPRTLSSYLFSDRGVYRPGDRFNIGLITRTANWATALDGVPLRAEIRDPRDTLMSTLPITLDSSGFNELSYTTGENSPTGEWNVYLYLVGKNNETSMLLGHTTVNVKEFEPDRLKVQLQLTPERQQGWVKPQELQANINVQNLFGTPAQERRVTSRLILRPMYPSFAPFPDYLFYENRHNSDGFETELEEQTTDLQGMATIPLDLKSYADATYQLQLLSEAFEAGGGRSVAATARVLVSPYDSLVGVKADGDLSYINRDAVRKLNIIAVDPSLNKIALPDLSLSLIEQKYISVLTKQDSGVYKYQSRLKEQLVSEQPLQISPTGTDFTLVTQQPGDFILVVKDSQGQVLNRISYTVAGNANLTRSLDRNTELKLKLNQAEYLQGEEIEIAINAPYAGSGLITIEKDKVYSWQWFHSDTTSSVQRIRIPPAMEGNGYINVQFVRDVNSDEIFMSPLSYGVMPFKISTKARQAAIELASPSVIKPGEVLPIKVTTDSPQRVVVFAVDEGILQVARYRLKDPLDYFFRKRELSVQSAQILDLILPEFSKLMALTSAPGGDAGEGLDLHLNPFKRKQDKPVAYWSGITEVNGETTFNYPIPDYFNGKIRVMAISATPDRIGKVQTSTTVRDNFILTPNVPAMVAPGDEFDVTVGVSNNLQGLKGKAVDITVRLTPPPQLEVVGEAQHSLSLAEKRETLVSFRLRARSALGDAPLVFDASYGSQSSRRTVSTSVRPAMPFRTQSVMGRMEGNKHTVTNLRQMFDNYAQRQATASHSPLVLTQGLARYLADYPYYSSEQIVSRSIPLIMQSKHPEMDSALNQNEVRDQLKNMLRILSSRQNSTGAIGLWHASPTPDPFVTPYVVQFLLEAKSAGYSLPNDILEGANNALRLLAARPYDDLYSLRLRAFAVYLLTLQGEITTNTLASVQSTLQQLYPDSWQTDLSAIYLASSYRLLKMDDEANKLLQPTWKQLGKAYSKAWWTQNYFDPLVQDATRLYLITRHFPEKVSSIPPQALENMVLALRDEHYTTYSSAMSILALESYTSQVAAQQDTPETLQIIEISKSKGIDPNVISTLNGLFVQGDFTGEAKAIQFNNYASAPAWYVVNQSGYDLQPPKDAISNGLEISRSYTDEQGKPVTQVTLGQKVNVHLKIRANAKQGQNNLAIVDLLPGGFEVVQQTAPEPEFYDNQDDQDEETGSGWQSPLMVSGSSWYPDYSDIREDRVIIYGSASTDVKEFIYQIKSTNTGRFVVPPAYGEAMYDRNVQALSVGKGHILVVPPEAK
>CP033699.1|AYX20816.1|3307517_3308396_+|transglycosylase
MRIPTLMATKRLLQNILMALFLLALLVIGFRLWPHPPLSQGLPLSTAYYDRHGTLLRLSLANDDRYRLWTPLEEISPLVIQGIQLHEDRGFYYHPGVNPISLLRGFWQSYVQGGRQQGGSTLTMQLARMHWHLNTRSPTGKLRQIARAIQLELSYSKHDILEAYLNYAPYGRNIESIAAASLIYFDKKPQQLTLPEALTLAVLPQSPSYRIDPTTGVLGSALTQARNRLFVRWQQTYPTDSSQMALFQLPLSLRQPEKMPYIAPHFIEQIRRQNQQLANTRDCKQYCVIACF
>CP033699.1|AYX20817.1|3308429_3309638_+|IS256-family-transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
>CP033699.1|AYX20818.1|3311416_3311662_-|transcriptional-regulator
MDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLLRPWPKGERLIAEVLELHPAEIWPSRYLKPKKSPAESVNPG
>CP033699.1|AYX20819.1|3312334_3312916_+|hypothetical-protein
MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELLLKDEYGLADFLLI
>CP033699.1|AYX22152.1|3313183_3313585_+|DUF1240-domain-containing-protein
MVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKVGFVIFAVPLLFYFSYLAFFSAIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLTEYSYKSCPRSSWMSPNKYVKDIKLCP
>CP033699.1|AYX20820.1|3313817_3314219_+|DUF1240-domain-containing-protein
MVKINRPLFGAFAVFLLFLSCWVSWFSLNGYWDFFKLSDVIIFSWKVGVMIFGAPVLFYFSYLAFYCAIKNKPAKVNNKLANTFAMLAMLGVVISFFSSVYIGYSLTEYGYKLCSRSSWMSPNEYVKDIKLCP
>CP033699.1|AYX20821.1|3314230_3314803_-|Hcp-family-type-VI-secretion-system-effector
MSNLIYASVNGKKQGLISAGCSSLNSIGNRCQAGHEDQIQVLSLNHSISRQQNVAHHPVHFVKPIDKSSPLLGVAISENERINVVFYFYRVNSAGQLELYYEVKLTDASIVDITSVYPHSIDNNEMIPYEKIQLKYKSIAWDHKSAGTSGYSVWEDRVYSFLISSTLFQVCLNIFIFFNWLVYQNYFWEK
>CP033699.1|AYX20822.1|3314826_3315078_-|hypothetical-protein
MMKNNKNINKDEFSDKLSQQIKEMINNSQLDSVEILSVVMESIFSLFSETEGHLAEMKFIDSAGEDYRFILRLEVPPILERQH

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Crispr_ID: CP033699_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033699_6

3975269-3975348

Orphan

Consensus_repeat	Method
CAGCCGCAGCCACGCTCAGCCATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP033699_6

>merge|CP033699|6|3975269-3975348|CRISPRCasFinder
CAGCCGCAGCCACGCTCAGCCATTCGACACCCATATCAGAATGACTGCGGCAACGCAGCCGCAGCCACGCTCAGCCATTC

>CP033699|6|6|3975269-3975348|CRISPRCasFinder
CAGCCGCAGCCACGCTCAGCCATTC	GACACCCATATCAGAATGACTGCGGCAACG
CAGCCGCAGCCACGCTCAGCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
CP033699.1\|AYX21389.1\|3984482_3984737_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX21385.1\|3977121_3978870_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
CP033699.1\|AYX21387.1\|3982488_3982959_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX21375.1\|3964437_3965868_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	unknown	unknown	gnl\|CDD\|183085
CP033699.1\|AYX21391.1\|3985751_3986774_-\|IS21-family-transposase-IS100	unknown	unknown	gnl\|CDD\|226950
CP033699.1\|AYX21384.1\|3976770_3976986_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP033699.1\|AYX21386.1\|3979027_3980866_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
CP033699.1\|AYX22189.1\|3969028_3970336_-\|inorganic-triphosphatase	unknown	unknown	gnl\|CDD\|225569
CP033699.1\|AYX21373.1\|3963038_3963182_+\|gluconate-5-dehydrogenase	unknown	unknown	unknown
CP033699.1\|AYX21377.1\|3970639_3971263_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|182809
CP033699.1\|AYX21383.1\|3975351_3976365_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
CP033699.1\|AYX21390.1\|3984972_3985755_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
CP033699.1\|AYX21379.1\|3972896_3973715_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
CP033699.1\|AYX21380.1\|3973988_3974348_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	unknown	unknown	gnl\|CDD\|183219
CP033699.1\|AYX21388.1\|3982967_3984350_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
CP033699.1\|AYX21381.1\|3974455_3975106_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
CP033699.1\|AYX21374.1\|3963150_3964401_-\|L-methionine/branched-chain-amino-acid-transporter	unknown	unknown	gnl\|CDD\|236823
CP033699.1\|AYX22190.1\|3982006_3982411_-\|hypothetical-protein	unknown	unknown	unknown
CP033699.1\|AYX21378.1\|3971422_3972661_+\|multifunctional-CCA-addition/repair-protein	unknown	unknown	gnl\|CDD\|182810
CP033699.1\|AYX21376.1\|3966002_3968858_-\|glutamine-synthetase-adenylyltransferase	unknown	unknown	gnl\|CDD\|236836

Protein	Function_ID	Function_description	E-value
CP033699.1\|AYX21391.1\|3985751_3986774_-\|IS21-family-transposase-IS100	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.49492e-79
CP033699.1\|AYX21385.1\|3977121_3978870_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
CP033699.1\|AYX21375.1\|3964437_3965868_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
CP033699.1\|AYX21384.1\|3976770_3976986_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.25342e-17
CP033699.1\|AYX21386.1\|3979027_3980866_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
CP033699.1\|AYX22189.1\|3969028_3970336_-\|inorganic-triphosphatase	gnl\|CDD\|225569	COG3025, COG3025, Uncharacterized conserved protein [Function unknown].	0
CP033699.1\|AYX21388.1\|3982967_3984350_-\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	2.83623e-06
CP033699.1\|AYX21377.1\|3970639_3971263_+\|SH3-domain-containing-protein	gnl\|CDD\|182809	PRK10884, PRK10884, SH3 domain-containing protein; Provisional.	4.34503e-147
CP033699.1\|AYX21383.1\|3975351_3976365_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
CP033699.1\|AYX21390.1\|3984972_3985755_-\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	6.46206e-178
CP033699.1\|AYX21379.1\|3972896_3973715_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	5.08833e-116
CP033699.1\|AYX21380.1\|3973988_3974348_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	gnl\|CDD\|183219	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase.	2.02028e-82
CP033699.1\|AYX21381.1\|3974455_3975106_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	6.06402e-111
CP033699.1\|AYX21374.1\|3963150_3964401_-\|L-methionine/branched-chain-amino-acid-transporter	gnl\|CDD\|236823	PRK11021, PRK11021, putative transporter; Provisional.	0
CP033699.1\|AYX21378.1\|3971422_3972661_+\|multifunctional-CCA-addition/repair-protein	gnl\|CDD\|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	0
CP033699.1\|AYX21376.1\|3966002_3968858_-\|glutamine-synthetase-adenylyltransferase	gnl\|CDD\|236836	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase.	0

>CP033699.1|AYX21381.1|3974455_3975106_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MSAIALGMIIFAYLCGSISSAILVCRVARLPDPRTHGSGNPGATNVLRIGGRTAAVAVLLFDILKGMLPVWIAYLLHIPPLYLGLTAIAACLGHIYPVFFHFKGGKGVATAFGAIAPIGWDLTGLMTGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVAMLSCLILMRHHDNIQRLWRGKEGKIWDKLRKKKQKTPAEEAAELEEKED
>CP033699.1|AYX21380.1|3973988_3974348_-|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase
MDIVFIEELSVITTIGVYDWEQTIQQKLVFDIEMGWDNRKAAGSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRRFNSPWVRIKVSKPGAVAQAKNVGVIIERGQRLS
>CP033699.1|AYX21379.1|3972896_3973715_-|undecaprenyl-diphosphate-phosphatase
MTDMYSLFVAFILGVVEGLTEFLPVSSTGHMIIVGELLGFTGDKAKTFEVIIQLGSILAVVVVFWRRLFGLIGIHFGAVPHEGKTNGHLTLGHILLAMIPAVILGLAFHDVIKALFDPKSVMYALVAGGVLLLAAEWLKPKNPKAVGLDDITYRQAFAIGCFQCLALWPGFSRSGATISGGMLVGVNRYAASEFSFILAVPMMIGASGLDLYKSLHFLTLGDLPMFAVGFITAFIVALIAIKTFLSLIKRISFVPFAIYRFIVAAVVYWVFM
>CP033699.1|AYX21378.1|3971422_3972661_+|multifunctional-CCA-addition/repair-protein
MNIYLVGGAVRDSLLNLPVTEQDWVVVGATPEQLLKLGYQQVGKDFPVFLHPVSHEEYALARTERKSGQGYTGFTCYAAPDVTLEDDLLRRDLTVNAIARSADGEFIDPYHGKQDLENRVLRHVSDAFGEDPLRVLRVARFAARFAYLGFTIAPETMSLMSNMAQSGELSALTPERVWKETEKALKTQSPHVYFQVLRDCGALAVLFPEIERLFGVPAPEKWHPEIDTGIHTLMTLAIAAQLSPEVDIRFAALCHDLGKGLTPKEHWPHHHGHGPAGVKLVEQLCQRLRIPNPVRDLAKLVAEYHDLIHTVNKLRPETLLKLFNAIDVWRKPERLEQMIMTSEADARGRTGFENNPYPQGDYLRAAFQIANGVSIQEVVASGLQGLAIRDELQRRRQQALAEWKQTQETASI
>CP033699.1|AYX21377.1|3970639_3971263_+|SH3-domain-containing-protein
MQKLRLICLTILSVSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLISVDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRTAEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNLQLDDKQRTIILQWFMYGGGVAGIGLLLGLVLPHLIPSRKKNNRWMNC
>CP033699.1|AYX22189.1|3969028_3970336_-|inorganic-triphosphatase
MTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAWFGLQQAIMARQGHWRDTARKEALSQAAFWLNGAVR
>CP033699.1|AYX21376.1|3966002_3968858_-|glutamine-synthetase-adenylyltransferase
MLPLPSELQIQAQSIKQRFSELPAPPDLRDEDIAVLALSDFVSDMLLIHPQWLEELHQQPPQPQEWQYYSQWLSQALAGVQDEAALLTALRLFRRRVMVRIAWSQVLQTSGTAETLQQLSTLAESMIIAARDWLYQVCCRELGTPCNRQGVPQPLLILGMGKLGGGELNFSSDIDLIFAYPENGQTQGGRRELDNAQFFTRLGQRLIKALDQHTIDGFVYRVDMRLRPFGDSGPLVLSFAALEDYYQEQGRDWERYAMVKARLMGGADDPYSQELRQMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLKDNIKLGAGGIREIEFITQVFQLIRGGREPRLQERALLPTLQAVAELGLLPEQQVADLSGSYLFLRRLENLLQAIADEQTQTLPNDPLNQARLAWGMGYADWAAMSTALENHMQAVRVVFDDLIGDETPDIGEDPSHGLYKSLWQDVLEESDLAPLTPHLEEAARRQLLATISGFRHDVDKRTIGPRGREVLDQLMPRLFAEVCPRPDANVALSRLILLLLSIVTRTTYLELLVEYHAALKHVIRLCSASPMVASQLARYPLLLDELLDPQSLYQPLAPSAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQQLRIAAGDITEALPVMKVSDHLTYLAEAIIDAVIQQAWNQMVARYGQPSHLQQSEGRGFAVIGYGKLGGWELGYSSDLDLVFLLDCPLDVMTDGDRSIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGEAGMLVSTIEAFADYQRNEAWTWEHQALVRARIVYGSPKLHQQFDAIRQQILCRHREDPQLQQEVREMREKMRNHLGSKQRDIFDIKADAGGITDIEFIAQYLVLRYAASEPRLTRWSDNVRIFESMAHYDIMSPEEAAALTRAYVTMRDEIHHLALQEQSSKVAADSFIAEREQVAASWHKWLAANDANVS
>CP033699.1|AYX21375.1|3964437_3965868_-|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE
MKVTLPDFRRAGVLVVGDVMLDRYWYGPTCRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVSPIELENAIRGRAETGFGVMDEQQLKIAVAQARQRGEKVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAGGEVKVLNFEDGVSTTNIIQSIKNGRG
>CP033699.1|AYX21374.1|3963150_3964401_-|L-methionine/branched-chain-amino-acid-transporter
MGGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFAALGRHFPSAGGAAHFVAIAFGPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDTGLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVAAIWWQGDIRLSQIPWPALQDVSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVLHFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQVRPQSKLARLSAGQTPVNALTAVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCMLAGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFALLWMLMSKPKTQLTQP
>CP033699.1|AYX21373.1|3963038_3963182_+|gluconate-5-dehydrogenase
MDVFTASLRSACSLRRGHFVNNLRAPIRCPKYFVFQHIKAELAASLA
>CP033699.1|AYX21383.1|3975351_3976365_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MRVLGIETSCDETGIAVYDDKAGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEANLSAKDIDAVAYTAGPGLVGALLVGATIGRALAFAWGVPAVPVHHMEGHLLAPMLEENAPEFPFVALLVSGGHTQLISVTGIGEYLLLGESVDDAAGEAFDKTAKLLGLDYPGGPMLSRMAQQGTVGRFTFPRPMTDRPGLDFSFSGLKTFAANTIRANGDDDQTRADIARAFEDAVVDTLAIKSKRALDQTGFKRLVIAGGVSANQTLRLKLADMMQKRGGEVFYARPEFCTDNGAMIAYAGMVRLRSNLNSELSVSVRPRWPLSELPKV
>CP033699.1|AYX21384.1|3976770_3976986_+|30S-ribosomal-protein-S21
MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
>CP033699.1|AYX21385.1|3977121_3978870_+|DNA-primase
MAGRIPRVFINDLLARTDIIDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGEKQFYHCFGCGAHGNAVDFLMNYDRLEFVESIEELATMHGLEVPYEAGSGTTQIERHQRQSLYQLMESLSAFYQQSLKGQNAKQAREYLKHRGLSEEIIQHFAIGFAPPGWDNALKRFGRDGESRTALNDAGMLVTNDTGRTYDRFRERVMFPIRDKRGRVIAFGGRILGDGVPKYLNSPETEIFHKGRQLYGLYEAQVNHPNPTRLLVVEGYMDVVALAQFGIDYAVASLGTATTAEHIQLLFRATDNVICCYDGDRAGRDAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLVRKEGKDAFEQRMEAAQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLISQVPGEALRLYLRQQLGNKLGLLDDSQLDKLMPKQIDNANTYQPPQLKRTTMRILIGLLVQNPQLATLIPSLQGLEQAKLAGLPLFIELVETCLAQPGLTTGQLLELYRDNKFSQQLETLATWNHMIVEDMVEPTFVDTLASLYDSILEQRQETLIARDRTHGLNAEERKELWSLNLALARKK
>CP033699.1|AYX21386.1|3979027_3980866_+|RNA-polymerase-sigma-factor-RpoD
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVLEEAPDADDLMLAENTTDTDDDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGESRLSDLITGFVDPNAEEDIAPTATHVGSELSTEEMDDEDEDEDEDDDAEDDNSIDPELARQKFSDLREQYENARMEIKKNGRNHANAAAEILKLSEVFKQFRLVPKQFDYLVNNMRAMMDRVRTQERIIMKLCVEQCKMPKKNFVTLFSSNETSDTWFNAAVAMGKPWSEKLKDVSEDVQRSLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
>CP033699.1|AYX22190.1|3982006_3982411_-|hypothetical-protein
MGYNINPPYTGKLETYDFGRDISPEQPDFWKQYGSFLRISNGSFADGCVFYGMSGGEDDAGLIEFNNALNIPDFKDETMTGLIVIGGNNTDTFYYDPRTGKWEACDRIGTDRVWESCDSLAELIETQIKMLENG
>CP033699.1|AYX21387.1|3982488_3982959_-|hypothetical-protein
MTDIEKAVTTFQAYRAAIGYPKIPPYEGEVIEYDFGRKIESNQPDFWTQYHEFLRLSDGLAADGVYFYGIACEGKLIGNRLIDNNDALRDGEMYDESMDGLIAIGSSNSDIFVYDTNTHKWESRDRIAIDDINESYDTLAELIDSQLQRINIGDAF
>CP033699.1|AYX21388.1|3982967_3984350_-|HNH-endonuclease
MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQRSSPDQPRPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSTDPHAFRFEGAAKIIKAFDDSVKCRNYQRTGGKPRSTQTRRLKSTTNTIPDRSMVTRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKATTEAARGRIADGAVGTLEGLGTLMGPSAQEYMAGAFNPEQAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEKVGTLGDVAKLGKAVELEKLEGYLGTYKGQKVLLQNVDVVKMDYVRRSTADRNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQVHHKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP
>CP033699.1|AYX21389.1|3984482_3984737_-|hypothetical-protein
MPTWRKEHMDTLTTATPSVHRKYFRHILGACGSCYFERQAGKFILGEEGDQFFSAYVREDSAYRIERMESESPLGYQTSGAIPV
>CP033699.1|AYX21390.1|3984972_3985755_-|AAA-family-ATPase
MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
>CP033699.1|AYX21391.1|3985751_3986774_-|IS21-family-transposase-IS100
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
CP033699_4	4.5\|2686203\|32\|CP033699\|CRISPRCasFinder,CRT	2686203-2686234	32	CP033699.1	2797142-2797173	1.0
CP033699_4	4.10\|2686203\|29\|CP033699\|PILER-CR	2686203-2686231	29	CP033699.1	2797145-2797173	1.0
CP033699_5	5.1\|3299986\|32\|CP033699\|CRISPRCasFinder	3299986-3300017	32	CP033699.1	2137089-2137120	1.0
CP033699_5	5.4\|3299987\|31\|CP033699\|CRT	3299987-3300017	31	CP033699.1	2137089-2137119	1.0

1. spacer 4.5|2686203|32|CP033699|CRISPRCasFinder,CRT matches to position: 2797142-2797173, mismatch: 0, identity: 1.0

acatcactagcggtatcgaacaattgagcgag	CRISPR spacer
acatcactagcggtatcgaacaattgagcgag	Protospacer
********************************

2. spacer 4.10|2686203|29|CP033699|PILER-CR matches to position: 2797145-2797173, mismatch: 0, identity: 1.0

acatcactagcggtatcgaacaattgagc	CRISPR spacer
acatcactagcggtatcgaacaattgagc	Protospacer
*****************************

3. spacer 5.1|3299986|32|CP033699|CRISPRCasFinder matches to position: 2137089-2137120, mismatch: 0, identity: 1.0

tctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
tctgtacgcataccgccatcttgcatcagtct	Protospacer
********************************

4. spacer 5.4|3299987|31|CP033699|CRT matches to position: 2137089-2137119, mismatch: 0, identity: 1.0

ctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
ctgtacgcataccgccatcttgcatcagtct	Protospacer
*******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033699_5	5.1\|3299986\|32\|CP033699\|CRISPRCasFinder	3299986-3300017	32	MT374852	Yersinia phage vB_YpM_3, complete genome	12-43	0	1.0
CP033699_5	5.4\|3299987\|31\|CP033699\|CRT	3299987-3300017	31	MT374852	Yersinia phage vB_YpM_3, complete genome	12-42	0	1.0
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK820641	Gordonia phage EnalisNailo, complete genome	34088-34119	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK878898	Gordonia phage Zameen, complete genome	34513-34544	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK919483	Gordonia phage Suscepit, complete genome	34514-34545	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK284520	Gordonia phage Lilas, complete genome	35799-35830	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK016492	Gordonia phage Bialota, complete genome	35265-35296	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK820642	Gordonia phage Polly, complete genome	33956-33987	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NC_041883	Gordonia phage Attis, complete genome	31646-31677	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK814755	Gordonia phage Antonio, complete genome	34513-34544	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK875796	Gordonia phage Tayonia, complete genome	34513-34544	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK801734	Gordonia phage LordFarquaad, complete genome	31627-31658	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	MK433274	Gordonia phage Bradissa, complete genome	34554-34585	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	KU963257	Gordonia phage Kita, complete genome	34522-34553	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NC_031251	Gordonia phage SoilAssassin, complete genome	31645-31676	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NC_031097	Gordonia phage Zirinka, complete genome	35253-35284	6	0.812
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NZ_CP005086	Sphingobium sp. TKS plasmid pTK2, complete sequence	138555-138586	6	0.812
CP033699_3	3.2\|1470505\|32\|CP033699\|PILER-CR,CRISPRCasFinder,CRT	1470505-1470536	32	MH616963	CrAssphage sp. isolate ctbg_1, complete genome	86942-86973	7	0.781
CP033699_4	4.1\|2685963\|32\|CP033699\|CRISPRCasFinder,CRT	2685963-2685994	32	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	69636-69667	7	0.781
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	JF974294	Aeromonas phage pIS4-A genomic sequence	21965-21996	7	0.781
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NC_021534	Vibrio phage pYD38-A genomic sequence	3299-3330	7	0.781
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	440819-440850	7	0.781
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	282870-282901	7	0.781
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	KJ433975	Mycobacterium phage 40BC, complete genome	23231-23262	7	0.781
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	KJ433973	Mycobacterium phage 39HC, complete genome	23231-23262	7	0.781
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NC_024145	Mycobacterium phage Hosp, complete genome	21427-21458	7	0.781
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	MT133560	Pseudomonas phage fnug, complete genome	23366-23399	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	KU521356	Pseudomonas phage KTN4, complete genome	24115-24148	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	MW057919	Pseudomonas phage vB_PaeM_kmuB, complete genome	24251-24284	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	NC_004629	Pseudomonas phage phiKZ, complete genome	22484-22517	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	MN871480	UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome	259590-259623	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	12439-12472	7	0.794
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	NC_042081	Pseudomonas phage SL2, complete genome	262490-262523	7	0.794
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	37586-37614	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	60831-60859	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	67671-67699	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	67672-67700	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	33438-33466	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	33830-33858	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	62769-62797	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	15616-15644	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	112580-112608	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	16858-16886	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	93737-93765	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	47570-47598	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	16520-16548	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	3287-3315	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	37637-37665	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	JF974294	Aeromonas phage pIS4-A genomic sequence	21968-21996	7	0.759
CP033699_4	4.8\|2686083\|29\|CP033699\|PILER-CR	2686083-2686111	29	NC_021534	Vibrio phage pYD38-A genomic sequence	3299-3327	7	0.759
CP033699_4	4.9\|2686143\|29\|CP033699\|PILER-CR	2686143-2686171	29	NZ_CP005086	Sphingobium sp. TKS plasmid pTK2, complete sequence	138555-138583	7	0.759
CP033699_3	3.2\|1470505\|32\|CP033699\|PILER-CR,CRISPRCasFinder,CRT	1470505-1470536	32	NZ_CP010358	Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence	46720-46751	8	0.75
CP033699_3	3.2\|1470505\|32\|CP033699\|PILER-CR,CRISPRCasFinder,CRT	1470505-1470536	32	NC_019694	Oscillatoria acuminata PCC 6304 plasmid pOSCIL6304.02, complete sequence	20911-20942	8	0.75
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	DI373487	KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof	4948-4981	8	0.765
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	NC_042060	Pseudomonas phage PA7, partial genome	4948-4981	8	0.765
CP033699_4	4.6\|2686263\|34\|CP033699\|CRISPRCasFinder,CRT	2686263-2686296	34	AP019418	Pseudomonas phage PA02 DNA, nearly complete genome	200537-200570	8	0.765
CP033699_4	4.7\|2686023\|29\|CP033699\|PILER-CR	2686023-2686051	29	AP014500	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, * SEQUENCING IN PROGRESS *, 2 ordered pieces	26489-26517	8	0.724
CP033699_3	3.2\|1470505\|32\|CP033699\|PILER-CR,CRISPRCasFinder,CRT	1470505-1470536	32	MT774386	CrAssphage cr110_1, complete genome	42858-42889	9	0.719
CP033699_3	3.2\|1470505\|32\|CP033699\|PILER-CR,CRISPRCasFinder,CRT	1470505-1470536	32	NZ_CP028934	Campylobacter jejuni strain FORC_083 plasmid pFORC_083_2, complete sequence	25849-25880	9	0.719
CP033699_4	4.2\|2686023\|32\|CP033699\|CRISPRCasFinder,CRT	2686023-2686054	32	NZ_CP031943	Nostoc sphaeroides strain Kutzing En plasmid p2, complete sequence	4006-4037	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	MF679145	Escherichia coli plasmid pBJ114-96, complete sequence	37586-37617	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	60831-60862	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP021340	Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence	67671-67702	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP021336	Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence	67672-67703	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	33435-33466	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP024832	Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence	33830-33861	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP024817	Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence	62769-62800	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	15616-15647	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP029117	Escherichia coli strain AR435 plasmid unnamed4	112580-112611	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	16858-16889	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	AP023222	Escherichia coli M505 plasmid pM505-b DNA, complete genome	93734-93765	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	AP023233	Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome	47570-47601	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP019075	Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence	16520-16551	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	3287-3318	9	0.719
CP033699_4	4.3\|2686083\|32\|CP033699\|CRISPRCasFinder,CRT	2686083-2686114	32	NZ_CP011063	Escherichia coli str. Sanji plasmid pSJ_98, complete sequence	37637-37668	9	0.719
CP033699_4	4.4\|2686143\|32\|CP033699\|CRISPRCasFinder,CRT	2686143-2686174	32	NZ_JX627581	Methylobacterium oryzae CBMB20 plasmid pMOC2, complete sequence	30496-30527	10	0.688

1. spacer 5.1|3299986|32|CP033699|CRISPRCasFinder matches to MT374852 (Yersinia phage vB_YpM_3, complete genome) position: , mismatch: 0, identity: 1.0

tctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
tctgtacgcataccgccatcttgcatcagtct	Protospacer
********************************

2. spacer 5.4|3299987|31|CP033699|CRT matches to MT374852 (Yersinia phage vB_YpM_3, complete genome) position: , mismatch: 0, identity: 1.0

ctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
ctgtacgcataccgccatcttgcatcagtct	Protospacer
*******************************

3. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK820641 (Gordonia phage EnalisNailo, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

4. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK878898 (Gordonia phage Zameen, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

5. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK919483 (Gordonia phage Suscepit, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

6. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK284520 (Gordonia phage Lilas, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

7. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK016492 (Gordonia phage Bialota, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

8. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK820642 (Gordonia phage Polly, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

9. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NC_041883 (Gordonia phage Attis, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

10. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK814755 (Gordonia phage Antonio, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

11. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK875796 (Gordonia phage Tayonia, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

12. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK801734 (Gordonia phage LordFarquaad, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

13. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to MK433274 (Gordonia phage Bradissa, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

14. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to KU963257 (Gordonia phage Kita, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

15. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NC_031251 (Gordonia phage SoilAssassin, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

16. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NC_031097 (Gordonia phage Zirinka, complete genome) position: , mismatch: 6, identity: 0.812

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
gtcgtc-cgccgtgatcctgagcgcgctcgcga	Protospacer
 ***.* . ****** **********.******

17. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP005086 (Sphingobium sp. TKS plasmid pTK2, complete sequence) position: , mismatch: 6, identity: 0.812

tcgccattccgtgaacctgagcgcgttcgcga--	CRISPR spacer
tcgcctttccctgaacctga--gcgatcgtgacc	Protospacer
***** **** *********  *** ***.**

18. spacer 3.2|1470505|32|CP033699|PILER-CR,CRISPRCasFinder,CRT matches to MH616963 (CrAssphage sp. isolate ctbg_1, complete genome) position: , mismatch: 7, identity: 0.781

atttattaaagatgctgacaaaaagaacttaa	CRISPR spacer
aattataaaagatgctgataaaaagattatta	Protospacer
* **** ***********.******* . * *

19. spacer 4.1|2685963|32|CP033699|CRISPRCasFinder,CRT matches to CP049262 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence) position: , mismatch: 7, identity: 0.781

tcaggggactggcgaacaatgtctttcatgat	CRISPR spacer
acgtcgcgctggcgaacaatctctttcatgat	Protospacer
 *.  * .************ ***********

20. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to JF974294 (Aeromonas phage pIS4-A genomic sequence) position: , mismatch: 7, identity: 0.781

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attacctgaatggcatttgctttatgcctgat	Protospacer
****.************* ****.   * ***

21. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NC_021534 (Vibrio phage pYD38-A genomic sequence) position: , mismatch: 7, identity: 0.781

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attacctgaatggcatttgctttatgcctgat	Protospacer
****.************* ****.   * ***

22. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

----tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
cacctcgc----tcgggaacctgggcgcgttcgcga	Protospacer
    ****    .** *******.************

23. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 7, identity: 0.781

----tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
cacctcgc----tcgggaacctgggcgcgttcgcga	Protospacer
    ****    .** *******.************

24. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to KJ433975 (Mycobacterium phage 40BC, complete genome) position: , mismatch: 7, identity: 0.781

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
cccgccg-cccgtgtacccgagcgcgttcgcgc	Protospacer
 .****. .***** ***.*************

25. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to KJ433973 (Mycobacterium phage 39HC, complete genome) position: , mismatch: 7, identity: 0.781

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
cccgccg-cccgtgtacccgagcgcgttcgcgc	Protospacer
 .****. .***** ***.*************

26. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NC_024145 (Mycobacterium phage Hosp, complete genome) position: , mismatch: 7, identity: 0.781

-tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
cccgccg-cccgtgtacccgagcgcgttcgcgc	Protospacer
 .****. .***** ***.*************

27. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

28. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

29. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

30. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

31. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

32. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

33. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 7, identity: 0.794

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgtaac	Protospacer
. ** *. *************** *********

34. spacer 4.8|2686083|29|CP033699|PILER-CR matches to MF679145 (Escherichia coli plasmid pBJ114-96, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

35. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

36. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP021340 (Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

37. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP021336 (Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

38. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP040920 (Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

39. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP024832 (Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

40. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP024817 (Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

41. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

42. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

43. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP023961 (Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

44. spacer 4.8|2686083|29|CP033699|PILER-CR matches to AP023222 (Escherichia coli M505 plasmid pM505-b DNA, complete genome) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

45. spacer 4.8|2686083|29|CP033699|PILER-CR matches to AP023233 (Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

46. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP019075 (Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

47. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

48. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NZ_CP011063 (Escherichia coli str. Sanji plasmid pSJ_98, complete sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attatctgattggcagtttctttaactgt	Protospacer
********* ***** *******..*

49. spacer 4.8|2686083|29|CP033699|PILER-CR matches to JF974294 (Aeromonas phage pIS4-A genomic sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attacctgaatggcatttgctttatgcct	Protospacer
****.************* ****.   *

50. spacer 4.8|2686083|29|CP033699|PILER-CR matches to NC_021534 (Vibrio phage pYD38-A genomic sequence) position: , mismatch: 7, identity: 0.759

attatctgaatggcattttctttggcgca	CRISPR spacer
attacctgaatggcatttgctttatgcct	Protospacer
****.************* ****.   *

51. spacer 4.9|2686143|29|CP033699|PILER-CR matches to NZ_CP005086 (Sphingobium sp. TKS plasmid pTK2, complete sequence) position: , mismatch: 7, identity: 0.759

tcgccattccgtgaacctgagcgcgttcg	CRISPR spacer
tcgcctttccctgaacctgagcgatcgtg	Protospacer
***** **** ************  . .*

52. spacer 3.2|1470505|32|CP033699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010358 (Acinetobacter johnsonii XBB1 plasmid pXBB1-8, complete sequence) position: , mismatch: 8, identity: 0.75

atttattaaagatgctgacaaaaagaacttaa	CRISPR spacer
atttattaatgatgctgacgaaaatatggcac	Protospacer
********* *********.**** *   .*

53. spacer 3.2|1470505|32|CP033699|PILER-CR,CRISPRCasFinder,CRT matches to NC_019694 (Oscillatoria acuminata PCC 6304 plasmid pOSCIL6304.02, complete sequence) position: , mismatch: 8, identity: 0.75

atttattaaagatgctgacaaaaagaacttaa	CRISPR spacer
atttattaaagaagctgccaaaagagcatcaa	Protospacer
************ **** *****...  *.**

54. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 8, identity: 0.765

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgcaac	Protospacer
. ** *. *************** ******.**

55. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 8, identity: 0.765

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgcaac	Protospacer
. ** *. *************** ******.**

56. spacer 4.6|2686263|34|CP033699|CRISPRCasFinder,CRT matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 8, identity: 0.765

tcagtcccgttatggtgctggtgttgcccgtaag	CRISPR spacer
cgagactggttatggtgctggtggtgcccgcaac	Protospacer
. ** *. *************** ******.**

57. spacer 4.7|2686023|29|CP033699|PILER-CR matches to AP014500 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C79, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 8, identity: 0.724

gaaaaggtaagatgggcaagcttctagta	CRISPR spacer
ggttgtagaagatgtgcaagcttctagta	Protospacer
*.  . . ****** **************

58. spacer 3.2|1470505|32|CP033699|PILER-CR,CRISPRCasFinder,CRT matches to MT774386 (CrAssphage cr110_1, complete genome) position: , mismatch: 9, identity: 0.719

atttattaaagatgctgacaaaaagaacttaa	CRISPR spacer
tgctattgaagatgctgataaaaagaaacttg	Protospacer
  .****.**********.******** .* .

59. spacer 3.2|1470505|32|CP033699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028934 (Campylobacter jejuni strain FORC_083 plasmid pFORC_083_2, complete sequence) position: , mismatch: 9, identity: 0.719

atttattaaagatgctgacaaaaagaacttaa	CRISPR spacer
gcacattacagacgctgacaaaaagaaagtta	Protospacer
.. .**** ***.**************  * *

60. spacer 4.2|2686023|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP031943 (Nostoc sphaeroides strain Kutzing En plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

gaaaaggtaagatgggcaagcttctagtagtt	CRISPR spacer
ttatgagaaagatgggcaagcttttagtggta	Protospacer
  * ..* ***************.****.**

61. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to MF679145 (Escherichia coli plasmid pBJ114-96, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

62. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

63. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP021340 (Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

64. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP021336 (Escherichia coli strain 95JB1 plasmid p95JB1A, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

65. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP040920 (Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

66. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP024832 (Escherichia coli strain CREC-532 plasmid pCREC-532_2, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

67. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP024817 (Escherichia coli strain CREC-629 plasmid pCREC-629_2, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

68. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

69. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP029117 (Escherichia coli strain AR435 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat-----	CRISPR spacer
attatctgattggcagtttctttaac-----tgttta	Protospacer
********* ***** *******..*     *

70. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP023961 (Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

71. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to AP023222 (Escherichia coli M505 plasmid pM505-b DNA, complete genome) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

72. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to AP023233 (Escherichia coli YJ4 plasmid pYJ4-b DNA, complete genome) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

73. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP019075 (Escherichia coli strain CRE1493 plasmid p1493-4, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

74. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

75. spacer 4.3|2686083|32|CP033699|CRISPRCasFinder,CRT matches to NZ_CP011063 (Escherichia coli str. Sanji plasmid pSJ_98, complete sequence) position: , mismatch: 9, identity: 0.719

attatctgaatggcattttctttggcgcagat	CRISPR spacer
attatctgattggcagtttctttaactgtttt	Protospacer
********* ***** *******..*     *

76. spacer 4.4|2686143|32|CP033699|CRISPRCasFinder,CRT matches to NZ_JX627581 (Methylobacterium oryzae CBMB20 plasmid pMOC2, complete sequence) position: , mismatch: 10, identity: 0.688

tcgccattccgtgaacctgagcgcgttcgcga	CRISPR spacer
ctaacgagccgtgaacctcagcgcattcgcgt	Protospacer
... *.  ********** *****.******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

228583 : 285996

Escherichia_phage(12.5%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX18229.1\|228583_229606_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	5.4e-201	99.7
AYX18230.1\|229602_230385_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX18231.1\|231466_232360_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYX18232.1\|232621_233326_+	pirin family protein	NA	NA	NA	NA
AYX18233.1\|234262_235162_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.0e-49	44.4
AYX21992.1\|235224_237198_+	penicillin-binding protein activator	NA	NA	NA	NA
AYX18234.1\|237281_237635_+	YraN family protein	NA	NA	NA	NA
AYX18235.1\|237905_238496_+	DnaA initiator-associating protein DiaA	A0A067XQR2	Caulobacter_phage	3.2e-12	32.0
AYX18236.1\|238506_239082_+	divisome-associated lipoprotein YraP	NA	NA	NA	NA
AYX18237.1\|239288_240014_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
AYX18238.1\|240010_240664_-	isoprenoid biosynthesis protein ElbB	NA	NA	NA	NA
AYX18239.1\|240693_240888_-	hypothetical protein	NA	NA	NA	NA
AYX18240.1\|240905_243242_-	aerobic respiration two-component sensor histidine kinase ArcB	A0A1V0SGX0	Hokovirus	9.9e-41	30.4
AYX18241.1\|243309_243525_-	hypothetical protein	NA	NA	NA	NA
AYX21993.1\|243505_244435_-	TIGR01212 family radical SAM protein	NA	NA	NA	NA
AYX18242.1\|245257_249715_+	glutamate synthase large subunit	NA	NA	NA	NA
AYX18243.1\|249724_251143_+	glutamate synthase small subunit	NA	NA	NA	NA
AYX18244.1\|251583_252069_+	hypothetical protein	NA	NA	NA	NA
AYX18245.1\|252221_252737_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.6e-28	55.6
AYX18246.1\|252742_253384_-	stringent starvation protein A	NA	NA	NA	NA
AYX18247.1\|253563_253761_+	hypothetical protein	NA	NA	NA	NA
AYX18248.1\|253757_254150_-	30S ribosomal protein S9	NA	NA	NA	NA
AYX18249.1\|254164_254593_-	50S ribosomal protein L13	NA	NA	NA	NA
AYX18250.1\|254906_256034_-	cell division protein ZapE	NA	NA	NA	NA
AYX18251.1\|256257_256662_+	DUF1043 family protein	NA	NA	NA	NA
AYX18252.1\|256932_258306_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	7.4e-20	28.2
AYX18253.1\|258422_258881_-\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX21994.1\|259106_260195_+\|protease	serine endoprotease DegS	A0A1B1IRD3	uncultured_Mediterranean_phage	2.1e-09	31.8
AYX18254.1\|260375_261638_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AYX18255.1\|261791_262046_-	BolA family iron metabolism protein IbaG	NA	NA	NA	NA
AYX18256.1\|262192_262495_-	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA
AYX18257.1\|262530_263154_-	phospholipid-binding protein MlaC	NA	NA	NA	NA
AYX18258.1\|263166_263724_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
AYX18259.1\|263728_264511_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
AYX18260.1\|264728_265547_-	phospholipid ABC transporter ATP-binding protein MlaF	G3M9Y6	Bacillus_virus	2.2e-19	31.7
AYX18261.1\|265811_266786_+	calcium/sodium antiporter	NA	NA	NA	NA
AYX21995.1\|266896_267883_+	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	6.0e-40	30.8
AYX18262.1\|268131_268695_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	A0A140XBD6	Dickeya_phage	9.6e-59	83.0
AYX18263.1\|268691_269255_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
AYX18264.1\|269238_269784_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
AYX18265.1\|269790_270516_+	lipopolysaccharide ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-22	28.4
AYX18266.1\|270577_272011_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
AYX21996.1\|272439_272922_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
AYX18267.1\|272948_273203_-	hypothetical protein	NA	NA	NA	NA
AYX18268.1\|273227_274082_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.2e-05	30.0
AYX18269.1\|274078_274351_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA
AYX21997.1\|274246_274498_-	hypothetical protein	NA	NA	NA	NA
AYX18270.1\|274688_275624_+	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	1.5e-48	38.5
AYX18271.1\|275635_276100_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
AYX18272.1\|276237_276624_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
AYX18273.1\|276922_277399_+	hypothetical protein	NA	NA	NA	NA
AYX18274.1\|277632_278586_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
AYX18275.1\|278996_280412_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
AYX18276.1\|280506_282174_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
AYX21998.1\|282526_282937_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA
AYX18277.1\|283168_283555_-	soluble cytochrome b562 2	NA	NA	NA	NA
AYX18278.1\|283762_284401_-	hypothetical protein	A0A1B0VBK8	Salmonella_phage	5.8e-52	49.0
AYX18279.1\|284655_285996_-\|protease	metalloprotease PmbA	NA	NA	NA	NA

DBSCAN-SWA_2

375757 : 423373

Escherichia_phage(30.77%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX18349.1\|375757_376780_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX18350.1\|376776_377559_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX18351.1\|378615_379800_+	elongation factor Tu	A0A2K9L516	Tupanvirus	2.0e-13	26.9
AYX18352.1\|380050_380434_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AYX18353.1\|380435_380981_+	transcription termination/antitermination protein NusG	A0A291AUS6	Sinorhizobium_phage	5.9e-13	28.3
AYX18354.1\|381171_381600_+	50S ribosomal protein L11	NA	NA	NA	NA
AYX18355.1\|381603_382308_+	50S ribosomal protein L1	NA	NA	NA	NA
AYX18356.1\|382672_383170_+	50S ribosomal protein L10	NA	NA	NA	NA
AYX18357.1\|383236_383605_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AYX18358.1\|383947_387976_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	1.2e-22	29.0
AYX18359.1\|388104_392325_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	8.5e-67	27.0
AYX18360.1\|392451_392910_-\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX18361.1\|393185_393299_+	hypothetical protein	NA	NA	NA	NA
AYX18362.1\|393341_394472_-	2-iminoacetate synthase ThiH	NA	NA	NA	NA
AYX18363.1\|394464_395280_-	thiazole synthase	NA	NA	NA	NA
AYX22002.1\|395281_395473_-	sulfur carrier protein ThiS	NA	NA	NA	NA
AYX18364.1\|395493_396291_-	HesA/MoeB/ThiF family protein	A0A1V0SAV8	Catovirus	1.6e-11	27.8
AYX22001.1\|396280_396928_-	thiamine phosphate synthase	NA	NA	NA	NA
AYX18365.1\|396941_398987_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA
AYX18366.1\|399362_399872_-	sigma D regulator	NA	NA	NA	NA
AYX18367.1\|399968_400751_+	NAD(+) diphosphatase	NA	NA	NA	NA
AYX18368.1\|400843_401629_+	hypothetical protein	NA	NA	NA	NA
AYX18369.1\|401747_402815_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
AYX18370.1\|402844_403585_+	deoxyribonuclease V	NA	NA	NA	NA
AYX18371.1\|403630_404221_+	DUF416 family protein	NA	NA	NA	NA
AYX18372.1\|404409_404685_+	DNA-binding protein HU-alpha	A7KV42	Bacillus_phage	3.6e-19	55.6
AYX18373.1\|404734_405388_+	DUF1481 domain-containing protein	NA	NA	NA	NA
AYX18374.1\|405535_406822_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
AYX18375.1\|406881_408471_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.2e-68	49.4
AYX18376.1\|408628_408859_+	hypothetical protein	NA	NA	NA	NA
AYX18377.1\|408938_409124_-	hypothetical protein	NA	NA	NA	NA
AYX18378.1\|414794_415893_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-46	39.2
AYX22003.1\|416363_416549_+	hypothetical protein	NA	NA	NA	NA
AYX18379.1\|416558_417341_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX18380.1\|417337_418360_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX18381.1\|418373_418481_-	glutathione S-transferase	NA	NA	NA	NA
AYX18382.1\|419484_420003_+	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AYX18383.1\|420076_420520_+	lysozyme	NA	NA	NA	NA
AYX18384.1\|420552_422397_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX18385.1\|422389_423373_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_3

775685 : 837169

Escherichia_phage(42.86%)

protease,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX18665.1\|775685_776708_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX18666.1\|776704_777487_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX18667.1\|777739_778324_+	DUF4232 domain-containing protein	NA	NA	NA	NA
AYX18668.1\|778440_778926_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
AYX18669.1\|779067_779985_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AYX18670.1\|780220_781552_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	1.2e-43	29.8
AYX18671.1\|781622_782147_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AYX18672.1\|782246_783092_-	cell division protein FtsN	NA	NA	NA	NA
AYX18673.1\|783157_784186_-	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
AYX18674.1\|784308_784452_-	primosome assembly protein PriA	NA	NA	NA	NA
AYX18675.1\|784538_786737_-	primosomal protein N'	NA	NA	NA	NA
AYX18676.1\|786979_787195_+	50S ribosomal protein L31	NA	NA	NA	NA
AYX18677.1\|787719_788175_-	hypothetical protein	NA	NA	NA	NA
AYX18678.1\|788523_788841_-	met regulon transcriptional regulator MetJ	NA	NA	NA	NA
AYX18679.1\|790380_792816_+	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
AYX18680.1\|793048_793933_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
AYX22026.1\|794110_795465_-\|transposase	IS3-like element IS1661 family transposase	A0A1B1P773	Bacillus_phage	1.1e-55	44.7
AYX18681.1\|795727_797161_+	MFS transporter	NA	NA	NA	NA
AYX18682.1\|797419_799600_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AYX18683.1\|799671_801000_-	lysine 6-monooxygenase	NA	NA	NA	NA
AYX18684.1\|800996_802745_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AYX18685.1\|802741_803692_-	N-acetyltransferase	NA	NA	NA	NA
AYX18686.1\|805586_806810_+	MFS transporter	NA	NA	NA	NA
AYX18687.1\|806757_806952_+	hypothetical protein	NA	NA	NA	NA
AYX18688.1\|807099_807933_-	dioxygenase	NA	NA	NA	NA
AYX18689.1\|808309_809686_-	peptidase	NA	NA	NA	NA
AYX18690.1\|810247_810991_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AYX18691.1\|810971_811622_-	acyl-homoserine-lactone synthase	NA	NA	NA	NA
AYX18692.1\|812796_813447_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYX18693.1\|813897_814293_+	lipoprotein	NA	NA	NA	NA
AYX18694.1\|814797_815169_+	hypothetical protein	NA	NA	NA	NA
AYX18695.1\|816568_817069_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYX18696.1\|817111_818656_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYX18697.1\|818667_820020_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX18698.1\|820016_820703_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYX18699.1\|820702_822439_+	OmpA family protein	NA	NA	NA	NA
AYX18700.1\|822442_822934_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYX18701.1\|823351_826000_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-91	29.4
AYX18702.1\|825996_828345_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.1e-18	33.3
AYX18703.1\|828359_830582_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
AYX18704.1\|830725_831082_+	hypothetical protein	NA	NA	NA	NA
AYX18705.1\|831045_831225_-	hypothetical protein	NA	NA	NA	NA
AYX18706.1\|831255_831450_+	hypothetical protein	NA	NA	NA	NA
AYX18707.1\|832674_833310_+	DUF2345 domain-containing protein	NA	NA	NA	NA
AYX18708.1\|833325_835623_+	kinase	NA	NA	NA	NA
AYX22027.1\|835627_836377_+	hypothetical protein	NA	NA	NA	NA
AYX18709.1\|836472_837169_+\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	1.3e-60	48.5

DBSCAN-SWA_4

925756 : 940652

Escherichia_phage(22.22%)

integrase,transposase,tRNA

attL 933705:933718|attR 939793:939806

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX18779.1\|925756_926656_+	tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	8.5e-33	29.7
AYX18780.1\|926686_927403_+	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA
AYX18781.1\|927409_929143_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.6e-64	29.7
AYX18782.1\|929321_930419_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	5.4e-05	39.0
AYX18783.1\|930429_931947_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.1e-85	37.0
AYX18784.1\|932636_933419_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX18785.1\|933415_934438_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
933705:933718	attL	NA	NA	NA	NA
AYX18786.1\|934494_935553_+\|integrase	integrase	Q7M297	Enterobacteria_phage	2.0e-113	60.4
AYX18787.1\|935634_935916_-	hypothetical protein	NA	NA	NA	NA
AYX18788.1\|936417_936678_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	7.4e-06	36.0
AYX18789.1\|936740_937103_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYX18790.1\|937266_937563_+	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA
AYX18791.1\|937562_937961_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA
AYX18792.1\|938360_940652_-	DNA primase	Q7M2A8	Enterobacteria_phage	7.2e-153	40.5
939793:939806	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1226834 : 1236471

Planktothrix_phage(16.67%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19056.1\|1226834_1228784_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	8.8e-35	37.7
AYX19057.1\|1229064_1229328_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-16	59.7
AYX19058.1\|1229513_1229720_+	hypothetical protein	NA	NA	NA	NA
AYX19059.1\|1229688_1230009_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	8.2e-15	42.7
AYX19060.1\|1230034_1232311_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.4e-166	41.7
AYX19061.1\|1232603_1233062_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19062.1\|1233433_1233652_-	translation initiation factor IF-1	NA	NA	NA	NA
AYX19063.1\|1233817_1234528_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AYX19064.1\|1234746_1236471_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	3.3e-17	31.8

DBSCAN-SWA_6

1276295 : 1323675

Escherichia_phage(25.0%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19090.1\|1276295_1277318_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19091.1\|1277331_1277430_-	glutathione S-transferase	NA	NA	NA	NA
AYX19092.1\|1278215_1278413_-	hypothetical protein	NA	NA	NA	NA
AYX19093.1\|1278650_1278860_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.0e-10	50.0
AYX19094.1\|1279407_1279590_+	hypothetical protein	NA	NA	NA	NA
AYX19095.1\|1279586_1280339_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AYX19096.1\|1280437_1280641_-	hypothetical protein	NA	NA	NA	NA
AYX19097.1\|1280701_1281595_+	hypothetical protein	NA	NA	NA	NA
AYX19098.1\|1282367_1283153_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
AYX19099.1\|1283149_1284472_+	chromosome partition protein MukF	NA	NA	NA	NA
AYX19100.1\|1284452_1285181_+	chromosome partition protein MukE	NA	NA	NA	NA
AYX19101.1\|1285177_1289635_+	chromosome partition protein MukB	NA	NA	NA	NA
AYX19102.1\|1289678_1289861_+	hypothetical protein	NA	NA	NA	NA
AYX19103.1\|1289850_1290309_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19104.1\|1290592_1292449_+	L,D-transpeptidase	NA	NA	NA	NA
AYX19105.1\|1292672_1293221_+	DUF882 domain-containing protein	A0A0K1LLY2	Rhodobacter_phage	7.8e-05	34.7
AYX19106.1\|1293281_1293929_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	2.2e-22	32.3
AYX19107.1\|1294082_1294199_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYX19108.1\|1294352_1295543_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AYX19109.1\|1295799_1296882_-	porin OmpF	Q1MVN1	Enterobacteria_phage	3.2e-111	56.5
AYX19110.1\|1297179_1298580_-\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	6.5e-80	35.2
AYX22051.1\|1299078_1300284_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AYX19111.1\|1300999_1303615_+	aminopeptidase N	NA	NA	NA	NA
AYX19112.1\|1304250_1305261_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
AYX19113.1\|1305443_1305995_+	cell division protein ZapC	NA	NA	NA	NA
AYX19114.1\|1306020_1307133_-	MOSC domain-containing protein	NA	NA	NA	NA
AYX19115.1\|1307232_1309353_+	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AYX19116.1\|1309358_1311272_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.5e-47	28.9
AYX19117.1\|1311400_1312687_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
AYX22052.1\|1312700_1314326_+	intermembrane transport protein PqiB	NA	NA	NA	NA
AYX19118.1\|1314322_1314901_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
AYX19119.1\|1314949_1315090_+	hypothetical protein	NA	NA	NA	NA
AYX19120.1\|1315170_1315338_+	ribosome modulation factor	NA	NA	NA	NA
AYX19121.1\|1315354_1315546_+	hypothetical protein	NA	NA	NA	NA
AYX19122.1\|1315535_1315994_+\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19123.1\|1317154_1317937_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19124.1\|1317933_1318956_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19125.1\|1318969_1319344_-	hypothetical protein	NA	NA	NA	NA
AYX19126.1\|1319589_1319778_+	hypothetical protein	NA	NA	NA	NA
AYX19127.1\|1320043_1320562_-	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AYX19128.1\|1320630_1322403_-\|protease	Lon protease family protein	NA	NA	NA	NA
AYX19129.1\|1322592_1323048_+	macrodomain Ter protein MatP	NA	NA	NA	NA
AYX19130.1\|1323216_1323675_-\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5

DBSCAN-SWA_7

1352858 : 1393875

Escherichia_phage(33.33%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19156.1\|1352858_1353881_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19157.1\|1353877_1354660_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19158.1\|1355094_1355595_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYX19159.1\|1355637_1357188_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYX19160.1\|1357199_1358552_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX19161.1\|1358548_1359235_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYX19162.1\|1359234_1360971_+	OmpA family protein	NA	NA	NA	NA
AYX19163.1\|1360974_1361466_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
AYX19164.1\|1361473_1361653_-	hypothetical protein	NA	NA	NA	NA
AYX19165.1\|1361853_1364496_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.6e-92	31.6
AYX19166.1\|1364498_1366847_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.5e-17	32.1
AYX19167.1\|1366862_1369163_+	M23 family metallopeptidase	NA	NA	NA	NA
AYX19168.1\|1369159_1369933_+	hypothetical protein	NA	NA	NA	NA
AYX19169.1\|1370086_1370347_+	DUF2345 domain-containing protein	NA	NA	NA	NA
AYX19170.1\|1370362_1372546_+	M23 family metallopeptidase	NA	NA	NA	NA
AYX19171.1\|1372718_1373189_+	hypothetical protein	NA	NA	NA	NA
AYX22055.1\|1375464_1376586_+	hypothetical protein	NA	NA	NA	NA
AYX19172.1\|1376582_1380005_+	type VI secretion protein VasK	NA	NA	NA	NA
AYX19173.1\|1381640_1382726_+	hypothetical protein	NA	NA	NA	NA
AYX19174.1\|1382725_1383196_+	hypothetical protein	NA	NA	NA	NA
AYX19175.1\|1383416_1385180_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX19176.1\|1385143_1386229_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYX19177.1\|1386203_1386785_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYX19178.1\|1386784_1387237_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYX19179.1\|1387261_1388629_+	hypothetical protein	NA	NA	NA	NA
AYX19180.1\|1388840_1389464_-	hypothetical protein	NA	NA	NA	NA
AYX19181.1\|1390146_1391742_+	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	6.1e-58	28.5
AYX19182.1\|1391969_1392623_+	hypothetical protein	NA	NA	NA	NA
AYX19183.1\|1392666_1393875_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8

DBSCAN-SWA_8

1541002 : 1639068

Escherichia_phage(17.5%)

coat,tail,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19301.1\|1541002_1542025_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19302.1\|1542021_1542804_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19303.1\|1543108_1544224_-	porin OmpF2	Q1MVN1	Enterobacteria_phage	2.1e-110	54.5
AYX19304.1\|1544493_1546674_+	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	1.1e-44	26.3
AYX19305.1\|1546741_1548184_-	catalase	A0A2K9L0T1	Tupanvirus	4.9e-99	38.8
AYX22061.1\|1548556_1549084_+	porin	NA	NA	NA	NA
AYX19306.1\|1549340_1550549_-	tyrosine transporter TyrP	NA	NA	NA	NA
AYX19307.1\|1550822_1551074_-	hypothetical protein	NA	NA	NA	NA
AYX19308.1\|1551167_1552361_+	nicotinamide mononucleotide deamidase-related protein YfaY	NA	NA	NA	NA
AYX19309.1\|1552418_1552928_-	ecotin	NA	NA	NA	NA
AYX19310.1\|1552962_1553220_-	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	4.0e-20	54.9
AYX19311.1\|1553223_1554354_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	7.6e-172	78.6
AYX19312.1\|1554516_1556805_-	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	1.1e-286	64.9
AYX19313.1\|1557298_1558027_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
AYX19314.1\|1558288_1560964_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	4.0e-102	34.4
AYX19315.1\|1561151_1564025_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	3.8e-42	28.3
AYX19316.1\|1564092_1564746_-	transcriptional regulator RcsB	NA	NA	NA	NA
AYX19317.1\|1564748_1565321_-	histidine phosphotransferase	NA	NA	NA	NA
AYX19318.1\|1565488_1567441_-	phosphotransferase RcsD	NA	NA	NA	NA
AYX19319.1\|1567464_1568619_-	MFS transporter	NA	NA	NA	NA
AYX19320.1\|1569721_1570837_+	porin	Q1MVN1	Enterobacteria_phage	9.6e-111	57.6
AYX19321.1\|1570851_1571049_+	hypothetical protein	NA	NA	NA	NA
AYX19322.1\|1572267_1573434_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA
AYX19323.1\|1573708_1575235_-	MFS transporter	NA	NA	NA	NA
AYX19324.1\|1575611_1576640_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AYX19325.1\|1576713_1578501_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.0e-10	63.5
AYX19326.1\|1578600_1578783_-	hypothetical protein	NA	NA	NA	NA
AYX19327.1\|1578907_1579843_-	omptin family outer membrane beta-barrel protein PcoA	NA	NA	NA	NA
AYX19328.1\|1580014_1580251_-	DinI family protein	K7PKR6	Enterobacteria_phage	4.8e-20	63.8
AYX19329.1\|1580456_1581179_-	LexA family transcriptional regulator	F1C599	Cronobacter_phage	2.2e-63	51.9
AYX19330.1\|1581141_1581354_-	hypothetical protein	NA	NA	NA	NA
AYX19331.1\|1581452_1581932_+	antitermination protein Q	S5M7R9	Escherichia_phage	2.3e-37	61.0
AYX19332.1\|1582133_1583447_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-90	46.0
AYX19333.1\|1583443_1584073_+	aldolase	A0A077SK32	Escherichia_phage	2.2e-48	56.6
AYX19334.1\|1584152_1584968_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AYX22062.1\|1584985_1585738_+	hydroxypyruvate isomerase	NA	NA	NA	NA
AYX19335.1\|1586368_1586659_+	hypothetical protein	H6WRZ3	Salmonella_phage	7.7e-12	46.3
AYX19336.1\|1586704_1587322_+	ATP-binding protein	NA	NA	NA	NA
AYX19337.1\|1587326_1587521_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.5e-08	60.4
AYX19338.1\|1587517_1589026_+\|tail	phage tail protein	B5TK67	Pseudomonas_phage	2.4e-104	44.2
AYX19339.1\|1589047_1589416_+\|tail	phage tail protein	NA	NA	NA	NA
AYX19340.1\|1589417_1589717_+\|tail	phage tail assembly protein	NA	NA	NA	NA
AYX19341.1\|1589837_1591331_+\|coat	coat protein	NA	NA	NA	NA
AYX19342.1\|1591597_1593004_+	hypothetical protein	Q8SBG8	Shigella_phage	2.1e-17	33.7
AYX19343.1\|1593000_1594056_+\|tail	phage tail protein	M1PVV2	Vibrio_phage	1.3e-37	27.2
AYX19344.1\|1594071_1594668_+\|plate	baseplate assembly protein	NA	NA	NA	NA
AYX19345.1\|1594664_1595120_+	hypothetical protein	A0A0C4UR04	Shigella_phage	4.3e-17	43.8
AYX19346.1\|1595123_1596260_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	4.5e-31	30.5
AYX19347.1\|1596256_1596517_+	DUF2313 domain-containing protein	NA	NA	NA	NA
AYX19348.1\|1596513_1596861_+	DUF2313 domain-containing protein	A0A2P9JZK7	Alteromonadaceae_phage	6.4e-21	41.3
AYX19349.1\|1596957_1597737_+\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	7.1e-52	52.4
AYX19350.1\|1598034_1598775_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYX19351.1\|1599065_1600502_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
AYX19352.1\|1600627_1600990_-	hypothetical protein	NA	NA	NA	NA
AYX19353.1\|1601689_1602178_-	hypothetical protein	NA	NA	NA	NA
AYX19354.1\|1602580_1603603_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-200	99.7
AYX19355.1\|1603599_1604382_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19356.1\|1605482_1605695_-	hypothetical protein	A0A1W6JPG0	Morganella_phage	1.3e-08	69.2
AYX19357.1\|1605654_1606038_-	hypothetical protein	A0A1W6JPG0	Morganella_phage	7.8e-36	66.7
AYX19358.1\|1606268_1608065_-	DUF3413 domain-containing protein	NA	NA	NA	NA
AYX19359.1\|1608092_1608320_-	DUF1414 domain-containing protein	NA	NA	NA	NA
AYX19360.1\|1608497_1609502_+	nucleoid-associated protein	A0A1V0E8C0	Vibrio_phage	3.1e-84	47.7
AYX19361.1\|1609702_1610161_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19362.1\|1610299_1610584_-	50S ribosomal protein L25	NA	NA	NA	NA
AYX19363.1\|1610745_1612503_-	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	2.3e-98	42.4
AYX19364.1\|1613016_1613724_+	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
AYX19365.1\|1613827_1615027_+	Bcr/CflA family drug resistance efflux transporter	S4TR35	Salmonella_phage	1.3e-23	25.1
AYX19366.1\|1615993_1616338_+	hypothetical protein	NA	NA	NA	NA
AYX19367.1\|1616398_1617991_-	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	1.3e-20	32.8
AYX19368.1\|1617992_1619021_-	ABC transporter permease subunit	NA	NA	NA	NA
AYX19369.1\|1619020_1620121_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
AYX19370.1\|1620130_1621939_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX19371.1\|1622020_1623538_-	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
AYX19372.1\|1624188_1624773_-	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	2.8e-13	39.8
AYX19373.1\|1625214_1625916_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AYX19374.1\|1625974_1626958_-	GTP-binding protein	NA	NA	NA	NA
AYX19375.1\|1627273_1627600_+	type 1 fimbrial protein	NA	NA	NA	NA
AYX19376.1\|1627765_1628509_+	GntR family transcriptional regulator	NA	NA	NA	NA
AYX19377.1\|1628652_1630125_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	7.1e-45	32.2
AYX19378.1\|1630709_1631903_+	mannonate dehydratase	NA	NA	NA	NA
AYX22063.1\|1632042_1632615_-	elongation factor P-like protein YeiP	NA	NA	NA	NA
AYX19379.1\|1632718_1633963_-	tryptophan permease	NA	NA	NA	NA
AYX19380.1\|1634337_1634592_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
AYX19381.1\|1634660_1635476_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.8e-13	32.6
AYX19382.1\|1635486_1636452_-	C-terminal binding protein	A0A1J0F959	Only_Syngen_Nebraska_virus	5.2e-28	30.3
AYX19383.1\|1636448_1637591_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AYX19384.1\|1637713_1639068_-\|transposase	IS3-like element IS1661 family transposase	A0A1B1P773	Bacillus_phage	1.1e-55	44.7

DBSCAN-SWA_9

1676738 : 1719549

Planktothrix_phage(16.67%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19415.1\|1676738_1677761_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22065.1\|1677774_1677891_-	chemotaxis protein	NA	NA	NA	NA
AYX19416.1\|1678126_1678879_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
AYX19417.1\|1679225_1679561_-	phosphate-starvation-inducible protein PsiF	NA	NA	NA	NA
AYX19418.1\|1679853_1680750_-	galactose-1-epimerase	NA	NA	NA	NA
AYX19419.1\|1680770_1680923_-	aldose epimerase	NA	NA	NA	NA
AYX19420.1\|1680916_1682068_-	galactokinase	NA	NA	NA	NA
AYX19421.1\|1682064_1683117_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
AYX19422.1\|1683126_1684143_-	UDP-glucose 4-epimerase	A0A2K9L1R4	Tupanvirus	3.0e-79	44.8
AYX19423.1\|1684502_1685321_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYX19424.1\|1685537_1687028_-	molybdate ABC transporter ATP-binding protein ModF	A0A1M7XV31	Cedratvirus	2.8e-12	26.8
AYX19425.1\|1687137_1687929_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA
AYX19426.1\|1688194_1688347_+	multidrug efflux pump-associated protein, AcrZ family	NA	NA	NA	NA
AYX19427.1\|1688581_1689361_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX19428.1\|1689360_1690056_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
AYX19429.1\|1690049_1691129_+	molybdenum import ATP-binding protein ModC	G9BWD6	Planktothrix_phage	1.4e-21	35.1
AYX19430.1\|1691184_1692006_-	pyridoxal phosphatase	NA	NA	NA	NA
AYX19431.1\|1692296_1693301_+	6-phosphogluconolactonase	NA	NA	NA	NA
AYX19432.1\|1693485_1694766_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	2.4e-17	32.1
AYX19433.1\|1694864_1695902_+	biotin synthase	NA	NA	NA	NA
AYX19434.1\|1695901_1697053_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AYX19435.1\|1697036_1697840_+	malonyl-[acyl-carrier protein] O-methyltransferase BioC	NA	NA	NA	NA
AYX19436.1\|1697832_1698555_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
AYX19437.1\|1698706_1699417_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-13	25.3
AYX19438.1\|1700506_1702522_+	excinuclease ABC subunit B	NA	NA	NA	NA
AYX19439.1\|1702813_1703059_+	DNA-binding protein VF530	NA	NA	NA	NA
AYX19440.1\|1703189_1704113_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	3.7e-23	27.8
AYX19441.1\|1704644_1705625_+	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
AYX19442.1\|1705725_1706205_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AYX19443.1\|1706201_1706447_+	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AYX19444.1\|1706446_1706902_+	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
AYX19445.1\|1707044_1707755_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
AYX19446.1\|1707989_1708448_+\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19447.1\|1708676_1710380_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	9.4e-57	31.5
AYX19448.1\|1710402_1711875_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AYX19449.1\|1711932_1712529_-	transcriptional regulator BetI	NA	NA	NA	NA
AYX19450.1\|1712893_1714942_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	1.4e-19	28.5
AYX19451.1\|1715173_1716067_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYX19452.1\|1716104_1716986_-	DMT family transporter	NA	NA	NA	NA
AYX19453.1\|1717298_1718162_+	xanthosine phosphorylase	Q5YBA4	Grouper_iridovirus	2.3e-51	40.7
AYX19454.1\|1718300_1719101_+	MFS transporter	NA	NA	NA	NA
AYX19455.1\|1719090_1719549_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5

DBSCAN-SWA_10

1843708 : 1890516

Enterobacterial_phage(20.0%)

integrase,tail,plate,transposase

attL 1860098:1860112|attR 1893739:1893753

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19573.1\|1843708_1843876_+\|tail	phage tail protein	K7PGV2	Enterobacterial_phage	1.0e-16	71.2
AYX19574.1\|1844026_1844206_+	hypothetical protein	NA	NA	NA	NA
AYX19575.1\|1844216_1844693_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
AYX19576.1\|1844878_1845490_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
AYX19577.1\|1845650_1846556_-	chemotaxis protein	NA	NA	NA	NA
AYX19578.1\|1846692_1848606_-	HAMP domain-containing protein	NA	NA	NA	NA
AYX19579.1\|1848959_1849835_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYX19580.1\|1849841_1850081_-	hypothetical protein	NA	NA	NA	NA
AYX19581.1\|1850135_1850498_-	flagellar protein FliT	NA	NA	NA	NA
AYX19582.1\|1850508_1850907_-	flagella export chaperone FliS	NA	NA	NA	NA
AYX19583.1\|1850917_1852318_-	flagellar filament capping protein FliD	NA	NA	NA	NA
AYX19584.1\|1852614_1853724_+	FliC/FljB family flagellin	NA	NA	NA	NA
AYX19585.1\|1854070_1854793_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AYX19586.1\|1855014_1855524_+	flagellar regulatory protein FliZ	NA	NA	NA	NA
AYX19587.1\|1855812_1856805_+	D-cysteine desulfhydrase	NA	NA	NA	NA
AYX19588.1\|1856928_1857729_+	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX19589.1\|1857728_1858391_+	cystine ABC transporter permease	NA	NA	NA	NA
AYX19590.1\|1858393_1859155_+	L-cystine ABC transporter ATP-binding protein YecC	G9BWD6	Planktothrix_phage	6.1e-32	40.5
AYX19591.1\|1859446_1859785_-	MarR family transcriptional regulator	NA	NA	NA	NA
AYX19592.1\|1859818_1860154_-	transcriptional regulator	NA	NA	NA	NA
1860098:1860112	attL	NA	NA	NA	NA
AYX19593.1\|1860606_1861389_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19594.1\|1861385_1862408_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19595.1\|1862576_1866548_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AYX19596.1\|1866892_1867090_+	hypothetical protein	NA	NA	NA	NA
AYX19597.1\|1867119_1868604_+	sodium/proline symporter PutP	NA	NA	NA	NA
AYX19598.1\|1868936_1869785_+	ferrous iron permease EfeU	NA	NA	NA	NA
AYX19599.1\|1869814_1870945_+	iron uptake system protein EfeO	NA	NA	NA	NA
AYX19600.1\|1870955_1872260_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
AYX19601.1\|1872345_1872945_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
AYX19602.1\|1873338_1874517_+	N-acetylneuraminate epimerase	NA	NA	NA	NA
AYX19603.1\|1874642_1876067_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
AYX19604.1\|1877181_1877733_+	attachment invasion locus protein	A0A1B0VBR9	Salmonella_phage	1.4e-22	35.0
AYX19605.1\|1877771_1877954_-	hypothetical protein	NA	NA	NA	NA
AYX19606.1\|1878072_1878327_+	hypothetical protein	NA	NA	NA	NA
AYX19607.1\|1878354_1878696_-	GlpM family protein	NA	NA	NA	NA
AYX19608.1\|1878823_1879048_-	DUF2594 family protein	NA	NA	NA	NA
AYX19609.1\|1879710_1880367_+	two-component system response regulator UvrY	NA	NA	NA	NA
AYX19610.1\|1880338_1882192_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AYX19611.1\|1882250_1882799_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AYX19612.1\|1883381_1883606_-\|integrase	integrase	K7PLZ2	Enterobacterial_phage	1.5e-18	76.8
AYX19613.1\|1883538_1884054_-\|integrase	integrase	H9C152	Pectobacterium_phage	6.1e-60	66.9
AYX19614.1\|1884164_1884392_+	DNA helicase	A0A192Y673	Salmonella_phage	2.1e-12	57.7
AYX19615.1\|1884760_1884907_+	hypothetical protein	NA	NA	NA	NA
AYX19616.1\|1885151_1885325_+	hypothetical protein	NA	NA	NA	NA
AYX19617.1\|1885516_1885699_+	hypothetical protein	NA	NA	NA	NA
AYX19618.1\|1885915_1886260_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AYX19619.1\|1886479_1887993_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AYX22075.1\|1888345_1888600_-	hypothetical protein	NA	NA	NA	NA
AYX19620.1\|1888604_1888958_-	DUF2778 domain-containing protein	NA	NA	NA	NA
AYX19621.1\|1888906_1889122_-	hypothetical protein	NA	NA	NA	NA
AYX19622.1\|1889556_1889844_-	hypothetical protein	NA	NA	NA	NA
AYX19623.1\|1889860_1890160_-	lysozyme	A0A218M4K8	Erwinia_phage	2.6e-23	64.9
AYX19624.1\|1890156_1890516_-\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	8.9e-18	62.5
1893739:1893753	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2092229 : 2208858

119

Escherichia_phage(16.33%)

integrase,tail,transposase,tRNA

attL 2104594:2104653|attR 2147068:2147787

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX19778.1\|2092229_2093960_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	3.8e-90	34.2
AYX19779.1\|2094590_2095166_+	VOC family protein	NA	NA	NA	NA
AYX19780.1\|2095397_2096162_+	copper homeostasis protein CutC	NA	NA	NA	NA
AYX19781.1\|2096354_2097326_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AYX19782.1\|2097322_2098126_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
AYX19783.1\|2098316_2098712_-	hypothetical protein	NA	NA	NA	NA
AYX19784.1\|2098891_2099707_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	2.9e-48	68.5
AYX19785.1\|2100764_2102561_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	2.8e-11	27.3
AYX19786.1\|2102560_2103004_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
AYX19787.1\|2103061_2103805_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYX19788.1\|2104013_2104535_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	6.5e-09	32.4
AYX19789.1\|2104567_2104753_+	hypothetical protein	NA	NA	NA	NA
2104594:2104653	attL	NA	NA	NA	NA
AYX19790.1\|2104742_2105201_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19791.1\|2105290_2105449_+	tat protein	NA	NA	NA	NA
AYX19792.1\|2105528_2106143_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AYX19793.1\|2106304_2107309_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	4.7e-08	27.8
AYX19794.1\|2107363_2108149_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
AYX22082.1\|2108145_2108904_-	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.2e-16	30.3
AYX19795.1\|2108979_2109936_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
AYX19796.1\|2109956_2111273_+	murein DD-endopeptidase MepM	G3MBP9	Bacillus_virus	2.4e-15	44.5
AYX19797.1\|2111539_2112502_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
AYX19798.1\|2112528_2112693_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYX19799.1\|2112846_2114289_-	pyruvate kinase	NA	NA	NA	NA
AYX22083.1\|2114618_2115488_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AYX19800.1\|2115840_2117325_+	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	1.2e-79	36.6
AYX19801.1\|2117368_2117560_+	hypothetical protein	NA	NA	NA	NA
AYX19802.1\|2117566_2118208_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AYX19803.1\|2118901_2119366_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
AYX19804.1\|2119352_2119682_+	spermidine export protein MdtI	NA	NA	NA	NA
AYX19805.1\|2119813_2120158_-	RidA family protein	NA	NA	NA	NA
AYX19806.1\|2120288_2122193_+	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.5e-92	32.6
AYX22084.1\|2122264_2122963_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AYX22085.1\|2123117_2123705_+	Slp family lipoprotein	NA	NA	NA	NA
AYX19807.1\|2123705_2123813_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYX19808.1\|2124347_2126036_+	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	3.0e-31	28.9
AYX22086.1\|2126195_2127317_+	ribonuclease D	NA	NA	NA	NA
AYX19809.1\|2127553_2127823_-	cell division topological specificity factor MinE	NA	NA	NA	NA
AYX19810.1\|2127826_2128639_-	septum site-determining protein MinD	NA	NA	NA	NA
AYX19811.1\|2128663_2129350_-	septum site-determining protein MinC	NA	NA	NA	NA
AYX19812.1\|2129775_2130027_-	hypothetical protein	NA	NA	NA	NA
AYX19813.1\|2130070_2130343_+	hypothetical protein	NA	NA	NA	NA
AYX19814.1\|2130483_2131569_+	lytic murein transglycosylase	NA	NA	NA	NA
AYX19815.1\|2131639_2132296_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
AYX19816.1\|2132398_2132845_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
AYX19817.1\|2132871_2134110_-\|integrase	site-specific integrase	Q20GI2	Phage_258-320	2.3e-121	53.3
AYX19818.1\|2134179_2135202_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX19819.1\|2135198_2135981_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19820.1\|2136095_2137208_+	hypothetical protein	I6PD76	Cronobacter_phage	6.0e-121	58.2
AYX19821.1\|2137329_2138103_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.8e-69	62.3
AYX19822.1\|2138116_2139322_+	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	1.8e-142	79.2
AYX19823.1\|2139321_2139852_+	hypothetical protein	G8C7P9	Escherichia_phage	9.1e-27	46.1
AYX19824.1\|2139848_2140103_+	hypothetical protein	J9Q7U0	Salmonella_phage	2.2e-18	53.1
AYX19825.1\|2140104_2140455_+	hypothetical protein	I6PD77	Cronobacter_phage	6.9e-31	56.0
AYX19826.1\|2140456_2141041_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.6e-48	52.1
AYX19827.1\|2141037_2141445_+	hypothetical protein	NA	NA	NA	NA
AYX19828.1\|2141510_2142431_+\|tail	phage tail protein	I6PBN6	Cronobacter_phage	4.4e-61	49.1
AYX19829.1\|2142443_2142755_+	hypothetical protein	I6PDG2	Cronobacter_phage	1.4e-30	58.3
AYX19830.1\|2142802_2143063_+	hypothetical protein	A0A0S2SY90	Pseudomonas_phage	3.7e-13	50.0
AYX19831.1\|2143063_2146567_+\|tail	phage tail tape measure protein	K7PMB9	Enterobacterial_phage	5.2e-118	33.2
AYX19832.1\|2146569_2146911_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.7e-21	50.0
AYX19833.1\|2147216_2147675_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX19834.1\|2147795_2148548_+\|tail	phage minor tail protein L	A0A1W6JNX9	Morganella_phage	9.4e-102	67.7
2147068:2147787	attR	NA	NA	NA	NA
AYX19835.1\|2148550_2149261_+	peptidase P60	K7P6F5	Enterobacteria_phage	1.3e-108	76.8
AYX19836.1\|2149521_2150154_+	hypothetical protein	NA	NA	NA	NA
AYX19837.1\|2150232_2150664_-	Arc family DNA-binding protein	G9L6D6	Escherichia_phage	2.5e-30	58.4
AYX19838.1\|2150787_2150955_+	Arc family DNA binding domain-containing protein	G9L6D7	Escherichia_phage	5.2e-13	61.8
AYX19839.1\|2150941_2152036_+	hypothetical protein	A0A2H4J0P1	uncultured_Caudovirales_phage	2.6e-36	31.9
AYX19840.1\|2152134_2152686_+	zinc ribbon domain-containing protein	S4TR42	Salmonella_phage	9.5e-27	58.0
AYX19841.1\|2152693_2153044_+	hypothetical protein	K7PLP0	Enterobacteria_phage	9.3e-12	33.6
AYX19842.1\|2153099_2153720_+\|tail	tail assembly protein	K7PGY0	Enterobacteria_phage	3.2e-55	57.0
AYX22087.1\|2153894_2154116_-	hypothetical protein	NA	NA	NA	NA
AYX22088.1\|2154118_2154298_-	hypothetical protein	NA	NA	NA	NA
AYX19843.1\|2154291_2157495_+	host specificity protein J	F1C571	Cronobacter_phage	0.0e+00	60.5
AYX19844.1\|2157494_2158493_+	hypothetical protein	NA	NA	NA	NA
AYX19845.1\|2158509_2159427_+	hypothetical protein	NA	NA	NA	NA
AYX22089.1\|2159488_2159857_+\|tail	phage tail protein	B6SCW7	Bacteriophage	5.0e-08	42.0
AYX19846.1\|2159853_2160009_+	hypothetical protein	NA	NA	NA	NA
AYX19847.1\|2160077_2161286_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX19848.1\|2161590_2162763_-	MFS transporter	NA	NA	NA	NA
AYX19849.1\|2162766_2163966_-	cysteine desulfurase	A0A1X7QGF3	Faustovirus	2.4e-38	29.6
AYX19850.1\|2163982_2164723_-	hypothetical protein	NA	NA	NA	NA
AYX19851.1\|2165814_2166171_+	hypothetical protein	NA	NA	NA	NA
AYX22090.1\|2166587_2167118_-	disulfide bond formation protein DsbB	NA	NA	NA	NA
AYX19852.1\|2167353_2168928_-	sodium/proton antiporter NhaB	NA	NA	NA	NA
AYX22091.1\|2168999_2169224_+	hypothetical protein	NA	NA	NA	NA
AYX19853.1\|2169171_2169891_+	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA
AYX19854.1\|2170108_2171644_-	SpoVR family protein	NA	NA	NA	NA
AYX19855.1\|2172108_2173413_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AYX19856.1\|2173428_2174631_-	Bcr/CflA family drug resistance efflux transporter	S4TR35	Salmonella_phage	7.6e-29	29.1
AYX19857.1\|2174895_2175765_-	pirin family protein	NA	NA	NA	NA
AYX19858.1\|2175962_2176868_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYX19859.1\|2176902_2178021_-	DMT family transporter	NA	NA	NA	NA
AYX19860.1\|2178128_2179403_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	1.5e-11	37.1
AYX19861.1\|2179552_2181487_-	PrkA family serine protein kinase	NA	NA	NA	NA
AYX19862.1\|2181534_2181747_+	hypothetical protein	NA	NA	NA	NA
AYX19863.1\|2181909_2182680_+	MipA/OmpV family protein	NA	NA	NA	NA
AYX19864.1\|2182752_2183628_-	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA
AYX19865.1\|2183941_2184946_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AYX19866.1\|2185284_2185698_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA
AYX22092.1\|2185768_2186041_+	DUF1315 family protein	NA	NA	NA	NA
AYX19867.1\|2186174_2186822_-	bifunctional nicotinamidase/pyrazinamidase	A0A2K9L6K4	Tupanvirus	1.8e-21	33.0
AYX19868.1\|2186836_2187853_-	L-asparaginase 1	NA	NA	NA	NA
AYX19869.1\|2187969_2189820_-	signal peptide peptidase SppA	NA	NA	NA	NA
AYX19870.1\|2189982_2190534_+	NAD(P)H nitroreductase	NA	NA	NA	NA
AYX19871.1\|2190758_2191805_+	selenide, water dikinase SelD	NA	NA	NA	NA
AYX19872.1\|2191863_2193792_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	4.2e-37	30.4
AYX19873.1\|2193788_2194079_+	DUF1496 domain-containing protein	NA	NA	NA	NA
AYX19874.1\|2194091_2194478_-	pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA	NA	NA	NA
AYX19875.1\|2194575_2195382_-	exodeoxyribonuclease III	NA	NA	NA	NA
AYX19876.1\|2196191_2197052_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYX19877.1\|2197923_2199132_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX19878.1\|2199094_2199964_-	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	5.5e-13	37.3
AYX19879.1\|2200047_2200512_-	YchJ family protein	NA	NA	NA	NA
AYX19880.1\|2201845_2202862_+	two-component system response regulator RssB	NA	NA	NA	NA
AYX19881.1\|2203168_2204515_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-81	38.3
AYX19882.1\|2204949_2205348_-	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA
AYX19883.1\|2206097_2206688_+	thymidine kinase	A0A1Z1LYD5	Serratia_phage	1.5e-54	55.8
AYX19884.1\|2207056_2207839_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX19885.1\|2207835_2208858_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0

DBSCAN-SWA_12

2474290 : 2530409

Tupanvirus(15.38%)

coat,protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX20111.1\|2474290_2476678_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
AYX20112.1\|2476691_2477675_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	7.6e-35	38.5
AYX22112.1\|2477991_2478072_-	pheST operon leader peptide PheM	NA	NA	NA	NA
AYX20113.1\|2478173_2478530_-	50S ribosomal protein L20	NA	NA	NA	NA
AYX20114.1\|2478567_2478765_-	50S ribosomal protein L35	NA	NA	NA	NA
AYX20115.1\|2478861_2479413_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.6e-16	33.7
AYX20116.1\|2479416_2481345_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.1e-127	37.1
AYX20117.1\|2481735_2481948_+	KTSC domain-containing protein	A0A0K1LMB5	Caulobacter_phage	9.9e-09	42.0
AYX20118.1\|2482257_2482635_+	hypothetical protein	NA	NA	NA	NA
AYX20119.1\|2482706_2482991_-	hypothetical protein	NA	NA	NA	NA
AYX20120.1\|2483275_2483959_+	MarC family NAAT transporter	NA	NA	NA	NA
AYX20121.1\|2484080_2484743_-	lytic transglycosylase	NA	NA	NA	NA
AYX20122.1\|2484954_2485923_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX20123.1\|2485919_2486810_+	manganese/iron ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	2.9e-09	27.5
AYX20124.1\|2486809_2487694_+	metal ABC transporter permease	NA	NA	NA	NA
AYX20125.1\|2487690_2488584_+	metal ABC transporter permease	NA	NA	NA	NA
AYX20126.1\|2488651_2488864_+	hypothetical protein	NA	NA	NA	NA
AYX20127.1\|2488888_2489764_+	fructosamine kinase family protein	NA	NA	NA	NA
AYX20128.1\|2489892_2490447_-	hypothetical protein	NA	NA	NA	NA
AYX20129.1\|2490857_2491523_+	hexitol phosphatase HxpB	NA	NA	NA	NA
AYX20130.1\|2491773_2492982_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX20131.1\|2493029_2493380_-	cupin domain-containing protein	NA	NA	NA	NA
AYX20132.1\|2493715_2494552_+	5-keto-4-deoxyuronate isomerase	NA	NA	NA	NA
AYX20133.1\|2494643_2495405_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-20	32.9
AYX20134.1\|2495740_2496280_+	exopolygalacturonate lyase	NA	NA	NA	NA
AYX20135.1\|2496289_2497072_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX20136.1\|2497068_2498091_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22113.1\|2498104_2498182_-	glutathione S-transferase	NA	NA	NA	NA
AYX20137.1\|2498149_2499367_+	exopolygalacturonate lyase	NA	NA	NA	NA
AYX20138.1\|2499407_2500298_+	sugar ABC transporter permease	NA	NA	NA	NA
AYX20139.1\|2500290_2501211_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AYX20140.1\|2501224_2502352_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-12	26.5
AYX20141.1\|2502367_2503660_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX20142.1\|2503957_2504668_+	porin	NA	NA	NA	NA
AYX20143.1\|2505147_2505696_+	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	4.0e-09	32.9
AYX20144.1\|2505893_2507291_+	L-cystine transporter	NA	NA	NA	NA
AYX20145.1\|2507505_2508357_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.3e-11	28.8
AYX20146.1\|2508741_2509533_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
AYX20147.1\|2509719_2510886_-	oligogalacturonate lyase	NA	NA	NA	NA
AYX20148.1\|2511212_2512580_+	MFS transporter	NA	NA	NA	NA
AYX20149.1\|2512633_2513437_-	molecular chaperone	NA	NA	NA	NA
AYX20150.1\|2514592_2517205_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AYX20151.1\|2517286_2518066_-	fimbrial chaperone	NA	NA	NA	NA
AYX20152.1\|2518218_2518761_-	type 1 fimbrial protein	NA	NA	NA	NA
AYX20153.1\|2519294_2519483_+	hypothetical protein	NA	NA	NA	NA
AYX20154.1\|2519418_2520300_-\|protease	protease HtpX	NA	NA	NA	NA
AYX20155.1\|2520773_2522846_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	4.0e-86	34.8
AYX20156.1\|2522865_2523579_-	RNA chaperone ProQ	NA	NA	NA	NA
AYX20157.1\|2523674_2524172_-	GAF domain-containing protein	NA	NA	NA	NA
AYX20158.1\|2524298_2525642_+	paraquat-inducible protein A	NA	NA	NA	NA
AYX20159.1\|2525619_2528262_+	PqiB family protein	NA	NA	NA	NA
AYX20160.1\|2528740_2529295_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
AYX20161.1\|2529300_2529831_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
AYX20162.1\|2529851_2530409_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_13

2604367 : 2665245

uncultured_virus(21.43%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX22115.1\|2604367_2605483_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AYX20220.1\|2605540_2606167_+	lysogenization regulator HflD	NA	NA	NA	NA
AYX20221.1\|2606227_2607598_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	2.0e-110	45.8
AYX20222.1\|2607785_2608409_+	lipoprotein	NA	NA	NA	NA
AYX20223.1\|2608619_2609291_+	two-component system response regulator PhoP	NA	NA	NA	NA
AYX20224.1\|2609296_2610751_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AYX20225.1\|2610834_2611956_+	cupin domain-containing protein	NA	NA	NA	NA
AYX20226.1\|2612188_2613424_-	peptidase T	NA	NA	NA	NA
AYX20227.1\|2613753_2614590_-	NAD-dependent deacylase	A0A2I7S9Y2	Vibrio_phage	2.6e-20	34.0
AYX20228.1\|2614638_2614812_-	ROK family protein	NA	NA	NA	NA
AYX20229.1\|2614783_2615554_-	N-acetylglucosamine kinase	NA	NA	NA	NA
AYX20230.1\|2615572_2616820_-	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
AYX20231.1\|2616819_2617524_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.4e-35	43.3
AYX20232.1\|2617516_2618719_-	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
AYX20233.1\|2618988_2622435_+	transcription-repair coupling factor	NA	NA	NA	NA
AYX20234.1\|2622673_2623213_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AYX20235.1\|2623542_2624751_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX20236.1\|2624846_2625260_-	hypothetical protein	NA	NA	NA	NA
AYX20237.1\|2625267_2625837_-	hypothetical protein	NA	NA	NA	NA
AYX20238.1\|2626374_2627679_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AYX20239.1\|2628053_2628596_-	alpha/beta hydrolase	NA	NA	NA	NA
AYX20240.1\|2628723_2629755_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
AYX22116.1\|2629825_2630632_-	thiamine kinase	NA	NA	NA	NA
AYX20241.1\|2630672_2631248_-	penicillin-binding protein activator LpoB	NA	NA	NA	NA
AYX20242.1\|2631288_2631678_-	DUF1425 domain-containing protein	NA	NA	NA	NA
AYX20243.1\|2631712_2632066_-	purine nucleoside phosphoramidase	NA	NA	NA	NA
AYX20244.1\|2632239_2633058_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
AYX20245.1\|2633680_2634463_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX20246.1\|2635494_2635917_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	7.8e-13	30.2
AYX20247.1\|2635906_2636107_-	hypothetical protein	NA	NA	NA	NA
AYX20248.1\|2636106_2637540_-	PTS glucose transporter subunit IIBC	NA	NA	NA	NA
AYX20249.1\|2637845_2638655_-	metal-dependent hydrolase	NA	NA	NA	NA
AYX20250.1\|2638669_2639692_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
AYX20251.1\|2639691_2640330_-	dTMP kinase	Q2Z0N0	Pseudomonas_phage	4.6e-25	36.1
AYX20252.1\|2640319_2641345_-	endolytic transglycosylase MltG	NA	NA	NA	NA
AYX20253.1\|2641613_2642420_-	aminodeoxychorismate lyase	NA	NA	NA	NA
AYX20254.1\|2642835_2643294_-\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX20255.1\|2643493_2644735_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
AYX20256.1\|2644829_2645066_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	7.7e-10	45.6
AYX20257.1\|2645219_2645954_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	7.7e-16	33.1
AYX20258.1\|2645967_2646897_-	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA
AYX20259.1\|2646934_2647885_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA
AYX20260.1\|2647891_2648926_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
AYX20261.1\|2648959_2649127_-	50S ribosomal protein L32	NA	NA	NA	NA
AYX20262.1\|2649139_2649664_-	23S rRNA accumulation protein YceD	NA	NA	NA	NA
AYX20263.1\|2649805_2650402_+	septum formation inhibitor Maf	NA	NA	NA	NA
AYX20264.1\|2650556_2651015_-\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX22117.1\|2651234_2652197_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA
AYX20265.1\|2652771_2656437_+	ribonuclease E	NA	NA	NA	NA
AYX20266.1\|2658016_2658304_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AYX20267.1\|2658538_2659585_+	dihydroorotase	NA	NA	NA	NA
AYX20268.1\|2659897_2660143_+	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	2.6e-13	51.3
AYX20269.1\|2660341_2660482_-	hypothetical protein	NA	NA	NA	NA
AYX20270.1\|2660648_2660945_+	biofilm formation regulator BssS	NA	NA	NA	NA
AYX20271.1\|2660907_2662116_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX20272.1\|2662476_2663592_+	N-methyl-L-tryptophan oxidase	NA	NA	NA	NA
AYX20273.1\|2664036_2665245_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8

DBSCAN-SWA_14

2826412 : 2885757

Escherichia_phage(28.57%)

transposase,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX20407.1\|2826412_2828482_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AYX20408.1\|2828659_2828938_-	YfcL family protein	NA	NA	NA	NA
AYX20409.1\|2828995_2829538_-	elongation factor P hydroxylase	NA	NA	NA	NA
AYX20410.1\|2829637_2830444_-	hypothetical protein	NA	NA	NA	NA
AYX20411.1\|2830447_2831275_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AYX20412.1\|2831280_2832366_-	chorismate synthase	A0A291AU41	Pandoravirus	2.7e-89	47.4
AYX20413.1\|2832442_2833375_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AYX22127.1\|2833744_2834275_+	endonuclease SmrB	NA	NA	NA	NA
AYX20414.1\|2834692_2835184_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
AYX20415.1\|2835752_2838077_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AYX20416.1\|2838076_2839387_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AYX20417.1\|2839673_2839970_-	DUF406 family protein	NA	NA	NA	NA
AYX20418.1\|2840377_2841649_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
AYX20419.1\|2841755_2842520_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AYX20420.1\|2842555_2843782_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
AYX20421.1\|2843781_2844294_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
AYX20422.1\|2844290_2844857_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
AYX20423.1\|2844853_2846824_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
AYX20424.1\|2846820_2847315_-	cytochrome c-type biogenesis protein CcmE	NA	NA	NA	NA
AYX20425.1\|2847311_2847614_-	heme exporter protein CcmD	NA	NA	NA	NA
AYX20426.1\|2847610_2848348_-	heme ABC transporter permease	NA	NA	NA	NA
AYX20427.1\|2848410_2849070_-	heme exporter protein CcmB	NA	NA	NA	NA
AYX20428.1\|2849039_2849696_-	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A1V0SE00	Indivirus	4.8e-09	24.7
AYX20429.1\|2850140_2850608_-	hypothetical protein	NA	NA	NA	NA
AYX20430.1\|2851223_2851766_+	LemA family protein	NA	NA	NA	NA
AYX20431.1\|2851770_2853810_+	DUF2207 domain-containing protein	NA	NA	NA	NA
AYX20432.1\|2854185_2854527_+	alkylphosphonate utilization protein	NA	NA	NA	NA
AYX20433.1\|2854601_2854949_-	hypothetical protein	NA	NA	NA	NA
AYX20434.1\|2854973_2855453_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYX20435.1\|2855549_2856356_-	ImpE family T6SS protein Cts1E	NA	NA	NA	NA
AYX20436.1\|2856375_2857224_-	TagK domain-containing protein	NA	NA	NA	NA
AYX20437.1\|2857223_2857484_-	hypothetical protein	NA	NA	NA	NA
AYX20438.1\|2857582_2860420_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.6e-29	23.1
AYX20439.1\|2860713_2864541_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AYX20440.1\|2864549_2865386_-	type VI secretion system protein TssL	NA	NA	NA	NA
AYX20441.1\|2865401_2866184_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX20442.1\|2866180_2867203_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22128.1\|2867216_2867849_-	type IV secretion protein DotU	NA	NA	NA	NA
AYX20443.1\|2867881_2869231_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX20444.1\|2869234_2869774_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYX20445.1\|2870047_2870533_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA
AYX20446.1\|2870858_2872361_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYX20447.1\|2872384_2872909_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYX22129.1\|2873013_2873568_-	type 1 fimbrial protein	NA	NA	NA	NA
AYX22130.1\|2873606_2874797_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AYX20448.1\|2874821_2876030_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX20449.1\|2876051_2877602_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AYX20450.1\|2877729_2878509_-	pilus assembly protein	NA	NA	NA	NA
AYX20451.1\|2878647_2879193_-	type 1 fimbrial protein	NA	NA	NA	NA
AYX22131.1\|2879393_2882069_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	1.0e-81	32.3
AYX20452.1\|2882851_2884732_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX20453.1\|2884731_2885757_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_15

3147910 : 3156460

Bacillus_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX20671.1\|3147910_3149110_-	proline/glycine betaine ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	7.1e-27	37.0
AYX20672.1\|3149785_3150757_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0N7CCA3	Skermania_phage	3.1e-137	74.3
AYX20673.1\|3150881_3153032_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.1e-211	51.8
AYX22148.1\|3153013_3153418_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	3.5e-10	32.8
AYX20674.1\|3153431_3153668_-	redoxin NrdH	V5UN81	Mycobacterium_phage	5.9e-18	53.3
AYX20675.1\|3154188_3154554_+	acid-shock protein	NA	NA	NA	NA
AYX20676.1\|3155251_3156460_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8

DBSCAN-SWA_16

3402075 : 3466324

Saccharomonospora_phage(21.43%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX20903.1\|3402075_3403098_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX20904.1\|3403094_3403877_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX20905.1\|3406287_3406641_-	hypothetical protein	NA	NA	NA	NA
AYX20906.1\|3406653_3407310_-	DNA-binding transcriptional repressor AcrR	NA	NA	NA	NA
AYX20907.1\|3407454_3408642_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYX20908.1\|3408658_3411811_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AYX20909.1\|3411996_3412257_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
AYX20910.1\|3412272_3412416_+	50S ribosomal protein L36	NA	NA	NA	NA
AYX20911.1\|3413289_3413643_+	hypothetical protein	NA	NA	NA	NA
AYX20912.1\|3413801_3414170_+	Hha toxicity modulator TomB	NA	NA	NA	NA
AYX20913.1\|3414218_3414422_+	modulating protein YmoA	NA	NA	NA	NA
AYX20914.1\|3415153_3415699_+	MGMT family protein	NA	NA	NA	NA
AYX20915.1\|3415834_3416356_-	lipoprotein	NA	NA	NA	NA
AYX20916.1\|3416612_3417473_+	acyl-CoA thioesterase II	NA	NA	NA	NA
AYX20917.1\|3417732_3419028_-	ammonium transporter AmtB	NA	NA	NA	NA
AYX20918.1\|3419061_3419400_-	P-II family nitrogen regulator	NA	NA	NA	NA
AYX20919.1\|3419805_3421629_-	SmdB family multidrug efflux ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	2.5e-39	27.3
AYX20920.1\|3421621_3423388_-	SmdA family multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	7.0e-47	28.3
AYX20921.1\|3423489_3423951_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AYX20922.1\|3424076_3425117_+	PLP-dependent cysteine synthase family protein	NA	NA	NA	NA
AYX20923.1\|3425328_3426150_-	HMP-PP phosphatase	NA	NA	NA	NA
AYX20924.1\|3426254_3427958_+	SgrR family transcriptional regulator	NA	NA	NA	NA
AYX20925.1\|3428222_3428921_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.1e-87	70.5
AYX20926.1\|3429006_3429414_-	acyl-CoA thioesterase	NA	NA	NA	NA
AYX20927.1\|3429767_3430214_-	ComEA family DNA-binding protein	NA	NA	NA	NA
AYX20928.1\|3430353_3432240_-	peptidylprolyl isomerase	NA	NA	NA	NA
AYX20929.1\|3432540_3432813_-	DNA-binding protein HU-beta	A4JWM7	Burkholderia_virus	3.5e-22	59.6
AYX20930.1\|3433030_3435385_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	4.5e-227	52.9
AYX20931.1\|3435579_3436851_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.3e-131	56.2
AYX20932.1\|3437056_3437680_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.7e-64	62.9
AYX20933.1\|3438141_3439446_-	trigger factor	NA	NA	NA	NA
AYX20934.1\|3439862_3440183_-	transcriptional regulator BolA	NA	NA	NA	NA
AYX20935.1\|3440531_3441110_+	hypothetical protein	NA	NA	NA	NA
AYX20936.1\|3441227_3442706_+	muropeptide MFS transporter AmpG	NA	NA	NA	NA
AYX20937.1\|3442997_3443765_+	hypothetical protein	NA	NA	NA	NA
AYX20938.1\|3444134_3445091_+	cytochrome o ubiquinol oxidase subunit II	NA	NA	NA	NA
AYX20939.1\|3445095_3447087_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AYX20940.1\|3447076_3447691_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AYX20941.1\|3447690_3448023_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AYX22157.1\|3448033_3448924_+	protoheme IX farnesyltransferase	NA	NA	NA	NA
AYX20942.1\|3449401_3450772_+	MFS transporter	NA	NA	NA	NA
AYX20943.1\|3450895_3451387_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
AYX20944.1\|3451503_3451692_+	hypothetical protein	NA	NA	NA	NA
AYX20945.1\|3451618_3452530_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AYX20946.1\|3452492_3453083_+	protein deglycase YajL	NA	NA	NA	NA
AYX20947.1\|3453150_3454602_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
AYX20948.1\|3454951_3455206_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA
AYX20949.1\|3455210_3456131_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
AYX20950.1\|3456286_3458146_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
AYX20951.1\|3458324_3458783_-\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX20952.1\|3458996_3459482_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA
AYX20953.1\|3459474_3460464_-	thiamine-phosphate kinase	NA	NA	NA	NA
AYX20954.1\|3460704_3461121_-	N utilization substance protein B	NA	NA	NA	NA
AYX20955.1\|3461141_3461612_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.5e-30	47.7
AYX20956.1\|3461747_3462857_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.5e-50	34.2
AYX20957.1\|3463006_3463456_-	transcriptional regulator NrdR	NA	NA	NA	NA
AYX20958.1\|3463526_3464129_-	hypothetical protein	NA	NA	NA	NA
AYX20959.1\|3464161_3464857_-	hypothetical protein	NA	NA	NA	NA
AYX20960.1\|3465154_3465613_-\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX20961.1\|3465865_3466324_-\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5

DBSCAN-SWA_17

4182500 : 4345819

104

Escherichia_phage(28.57%)

protease,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX21572.1\|4182500_4183337_+\|protease	rhomboid family intramembrane serine protease GlpG	NA	NA	NA	NA
AYX21573.1\|4183371_4184130_+	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA
AYX21574.1\|4184896_4185679_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX21575.1\|4185675_4186698_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX22204.1\|4186711_4186795_-	coproporphyrinogen III oxidase	NA	NA	NA	NA
AYX21576.1\|4187831_4190198_-	EAL domain-containing protein	NA	NA	NA	NA
AYX21577.1\|4190201_4190399_-	hypothetical protein	NA	NA	NA	NA
AYX21578.1\|4190837_4192115_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYX21579.1\|4192127_4195247_+	hydrophobe/amphiphile efflux-1 family RND transporter	NA	NA	NA	NA
AYX21580.1\|4195381_4196872_-	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
AYX21581.1\|4197149_4197737_+	hypothetical protein	NA	NA	NA	NA
AYX21582.1\|4198590_4209708_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	1.6e-133	37.8
AYX21583.1\|4209810_4211691_-	hypothetical protein	NA	NA	NA	NA
AYX21584.1\|4212086_4212173_-	hypothetical protein	NA	NA	NA	NA
AYX21585.1\|4212253_4213129_-	hypothetical protein	NA	NA	NA	NA
AYX21586.1\|4213458_4213917_+\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX21587.1\|4214048_4215866_-	hypothetical protein	NA	NA	NA	NA
AYX21588.1\|4215884_4216070_-	hypothetical protein	NA	NA	NA	NA
AYX22206.1\|4216436_4216640_+	hypothetical protein	NA	NA	NA	NA
AYX22205.1\|4216584_4218141_+	AbgT family transporter	NA	NA	NA	NA
AYX21589.1\|4218218_4219451_+	peptidase T	A0A0K2CPK3	Brevibacillus_phage	1.2e-05	39.1
AYX21590.1\|4219838_4221911_+	TonB-dependent receptor	NA	NA	NA	NA
AYX21591.1\|4225488_4226511_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX21592.1\|4226507_4227290_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX21593.1\|4227350_4233956_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	8.7e-42	25.0
AYX21594.1\|4233963_4235652_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	3.1e-36	25.0
AYX21595.1\|4235664_4241448_+	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	1.3e-41	31.3
AYX21596.1\|4241444_4242515_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AYX21597.1\|4242511_4243639_+	thiazolinyl imide reductase	NA	NA	NA	NA
AYX21598.1\|4243631_4244396_+	thioesterase	NA	NA	NA	NA
AYX21599.1\|4244385_4245690_+	MFS transporter	NA	NA	NA	NA
AYX21600.1\|4245689_4247462_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.8e-30	25.6
AYX21601.1\|4247454_4249212_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.7e-34	24.0
AYX21602.1\|4249534_4250410_-	ornithine carbamoyltransferase	NA	NA	NA	NA
AYX21603.1\|4250845_4251244_-	hypothetical protein	NA	NA	NA	NA
AYX21604.1\|4252311_4252512_-	hypothetical protein	NA	NA	NA	NA
AYX21605.1\|4252783_4254127_+	gluconate transporter GntP	NA	NA	NA	NA
AYX22207.1\|4259624_4263317_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AYX21606.1\|4263902_4266152_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.2e-27	27.0
AYX21607.1\|4266177_4267497_+	hypothetical protein	NA	NA	NA	NA
AYX21608.1\|4267510_4271827_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	1.8e-27	49.6
AYX21609.1\|4271745_4271937_+	hypothetical protein	NA	NA	NA	NA
AYX21610.1\|4271957_4272344_+	hypothetical protein	NA	NA	NA	NA
AYX21611.1\|4272887_4273301_+	hypothetical protein	NA	NA	NA	NA
AYX21612.1\|4273480_4274851_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
AYX22208.1\|4275132_4276128_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYX21613.1\|4276445_4277609_+	1,4-beta-xylanase	NA	NA	NA	NA
AYX21614.1\|4277498_4278853_-\|transposase	IS3-like element IS1661 family transposase	A0A1B1P773	Bacillus_phage	1.1e-55	44.7
AYX21615.1\|4278903_4279647_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX21616.1\|4279649_4280699_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYX21617.1\|4280824_4282141_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AYX21618.1\|4282140_4282686_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYX21619.1\|4282688_4284035_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX21620.1\|4284034_4284802_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYX21621.1\|4284812_4287416_+	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	6.4e-89	31.5
AYX21622.1\|4287412_4288210_+	Fis family transcriptional regulator	NA	NA	NA	NA
AYX21623.1\|4288206_4288893_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AYX22209.1\|4288889_4290287_+	type VI secretion system protein TssA	NA	NA	NA	NA
AYX21624.1\|4290318_4293852_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AYX21625.1\|4293976_4294759_+	hypothetical protein	NA	NA	NA	NA
AYX21626.1\|4294755_4295289_+	hypothetical protein	NA	NA	NA	NA
AYX21627.1\|4295310_4297713_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.8e-27	26.3
AYX21628.1\|4297718_4298177_+	DUF1795 domain-containing protein	NA	NA	NA	NA
AYX21629.1\|4298169_4301034_+	hypothetical protein	NA	NA	NA	NA
AYX21630.1\|4301061_4302432_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	3.3e-28	48.6
AYX21631.1\|4302433_4302919_+	SMI1/KNR4 family protein	NA	NA	NA	NA
AYX21632.1\|4302968_4303160_-	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
AYX21633.1\|4303235_4303460_-	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
AYX21634.1\|4303541_4303949_-	XRE family transcriptional regulator	S5MUA5	Brevibacillus_phage	3.1e-06	32.2
AYX21635.1\|4304309_4306508_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.6e-27	26.3
AYX21636.1\|4306510_4306933_+	DUF1795 domain-containing protein	NA	NA	NA	NA
AYX22210.1\|4306934_4307003_-	hypothetical protein	NA	NA	NA	NA
AYX21637.1\|4306977_4311516_+	hypothetical protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.2e-27	35.2
AYX21638.1\|4311524_4312319_+	hypothetical protein	NA	NA	NA	NA
AYX22211.1\|4312376_4312646_-	type I addiction module toxin, SymE family	NA	NA	NA	NA
AYX21639.1\|4312665_4313565_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
AYX21640.1\|4314749_4315772_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX21641.1\|4315785_4315899_-	chemotaxis protein	NA	NA	NA	NA
AYX21642.1\|4315861_4316413_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYX21643.1\|4316623_4317574_+	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	8.7e-28	31.2
AYX21644.1\|4317608_4318568_-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA
AYX21645.1\|4318564_4319602_-	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA
AYX21646.1\|4325268_4325454_+	hypothetical protein	NA	NA	NA	NA
AYX21647.1\|4325737_4326271_-	menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA	NA	NA	NA
AYX21648.1\|4326292_4327744_-	Trk system potassium transporter TrkH	NA	NA	NA	NA
AYX21649.1\|4328332_4328791_-\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX21650.1\|4328895_4329105_-	hypothetical protein	NA	NA	NA	NA
AYX21651.1\|4329104_4330436_-	Xaa-Pro dipeptidase	NA	NA	NA	NA
AYX21652.1\|4330762_4332952_+	fatty acid oxidation complex subunit alpha FadB	NA	NA	NA	NA
AYX21653.1\|4332963_4334127_+	acetyl-CoA C-acyltransferase FadA	NA	NA	NA	NA
AYX21654.1\|4334286_4334988_-	NAD(P)H-flavin reductase	NA	NA	NA	NA
AYX22212.1\|4335042_4336539_-	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA
AYX21655.1\|4336786_4337275_+	transcription/translation regulatory transformer protein RfaH	NA	NA	NA	NA
AYX21656.1\|4337384_4338407_-	porphobilinogen synthase	NA	NA	NA	NA
AYX21657.1\|4338421_4338757_-	deoxyribonuclease	NA	NA	NA	NA
AYX21658.1\|4338795_4339578_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX21659.1\|4339574_4340597_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX21660.1\|4340610_4340691_-	glutathione S-transferase	NA	NA	NA	NA
AYX21661.1\|4340807_4340957_-	hypothetical protein	NA	NA	NA	NA
AYX21662.1\|4341131_4341371_-	hypothetical protein	NA	NA	NA	NA
AYX22213.1\|4341640_4342876_+	HlyD family secretion protein	NA	NA	NA	NA
AYX21663.1\|4342868_4344983_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	4.8e-34	26.5
AYX21664.1\|4344926_4345172_-	hypothetical protein	NA	NA	NA	NA
AYX21665.1\|4345360_4345819_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5

DBSCAN-SWA_18

4399914 : 4447445

Escherichia_phage(30.77%)

integrase,transposase,tRNA

attL 4405576:4405589|attR 4449845:4449858

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX21719.1\|4399914_4400607_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
AYX21720.1\|4400607_4402689_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
AYX21721.1\|4402880_4402973_+	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYX21722.1\|4403054_4404269_-	sodium/glutamate symporter	NA	NA	NA	NA
AYX21723.1\|4404506_4405892_+	uracil-xanthine permease	H9YQ34	environmental_Halophage	3.8e-56	80.0
4405576:4405589	attL	NA	NA	NA	NA
AYX21724.1\|4406039_4407749_+	AsmA family protein	NA	NA	NA	NA
AYX21725.1\|4407883_4408807_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYX21726.1\|4408982_4409063_+	coproporphyrinogen III oxidase	NA	NA	NA	NA
AYX21727.1\|4409076_4410099_+\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX21728.1\|4410095_4410878_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX21729.1\|4410951_4411389_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
AYX21730.1\|4411395_4412280_-	virulence factor BrkB family protein	NA	NA	NA	NA
AYX21731.1\|4412376_4412967_-	glucose-1-phosphatase	NA	NA	NA	NA
AYX21732.1\|4413288_4415112_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	1.2e-20	42.3
AYX21733.1\|4415673_4417083_+	glutamate--ammonia ligase	NA	NA	NA	NA
AYX21734.1\|4417099_4417189_-	AAA family ATPase	NA	NA	NA	NA
AYX21735.1\|4417154_4417361_+	hypothetical protein	NA	NA	NA	NA
AYX21736.1\|4417350_4417809_+\|transposase	IS200/IS605 family transposase IS1541A	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX21737.1\|4418045_4419095_+	nitrogen regulation protein NR(II)	Q8QKV7	Ectocarpus_siliculosus_virus	4.2e-07	25.2
AYX21738.1\|4419102_4420515_+	nitrogen regulation protein NR(I)	Q56AR1	Bacillus_thuringiensis_phage	3.1e-05	25.6
AYX21739.1\|4420568_4421942_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
AYX22216.1\|4421944_4422112_-	high mobility group protein Z	NA	NA	NA	NA
AYX21740.1\|4422124_4422691_-	GTPase-activating protein	NA	NA	NA	NA
AYX21741.1\|4422702_4422981_-	hypothetical protein	NA	NA	NA	NA
AYX21742.1\|4423435_4424086_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
AYX21743.1\|4424337_4424796_-\|transposase	IS200/IS605 family transposase IS1541B	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
AYX21744.1\|4425204_4428003_-	DNA polymerase I	A0A218MKQ4	uncultured_virus	2.7e-69	32.8
AYX21745.1\|4428494_4429118_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
AYX21746.1\|4429145_4430132_-	serine/threonine protein kinase	NA	NA	NA	NA
AYX21747.1\|4430211_4430481_-	DUF1040 family protein	NA	NA	NA	NA
AYX21748.1\|4430580_4431222_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AYX22217.1\|4431221_4431752_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AYX21749.1\|4431809_4433018_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
AYX21750.1\|4433139_4433370_-	hypothetical protein	NA	NA	NA	NA
AYX21751.1\|4438664_4438850_+	hypothetical protein	NA	NA	NA	NA
AYX21752.1\|4439218_4439911_+	FadR family transcriptional regulator	NA	NA	NA	NA
AYX21753.1\|4439990_4441415_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
AYX21754.1\|4441411_4441582_-	transcriptional regulator	NA	NA	NA	NA
AYX21755.1\|4441544_4441631_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYX21756.1\|4441634_4442561_-	ribokinase	NA	NA	NA	NA
AYX21757.1\|4442611_4443031_-	D-ribose pyranase	NA	NA	NA	NA
AYX21758.1\|4443235_4445104_-	low affinity potassium transporter Kup	A7J6G4	Paramecium_bursaria_Chlorella_virus	5.8e-68	30.5
AYX21759.1\|4445531_4446314_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
AYX21760.1\|4446310_4447333_-\|transposase	IS21 family transposase IS100	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
AYX21761.1\|4447346_4447445_-\|integrase	integrase	NA	NA	NA	NA
4449845:4449858	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: CP033699.1|AYX19801.1|2117368_2117560_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP033699.1|AYX22091.1|2168999_2169224_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP033699.1|AYX19886.1|2208914_2209103_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: CP033699.1|AYX19888.1|2212286_2212496_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP033699.1|AYX19801.1|2117368_2117560_+|hypothetical-protein

2117368_2117560_+

63 aa aa

2092229-2208858

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP033699_5	Orphan	5.1\|3299986\|32\|CP033699\|CRISPRCasFinder	3299986-3300017	32	2137120-2137089	0
CP033699_5	Orphan	5.4\|3299987\|31\|CP033699\|CRT	3299987-3300017	31	2137119-2137089	0

1. spacer 5.1|3299986|32|CP033699|CRISPRCasFinder matches to CP033699 position: 2137120-2137089, mismatch: 0

tctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
tctgtacgcataccgccatcttgcatcagtct	Protospacer
********************************

2. spacer 5.4|3299987|31|CP033699|CRT matches to CP033699 position: 2137119-2137089, mismatch: 0

ctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
ctgtacgcataccgccatcttgcatcagtct	Protospacer
*******************************

CP033699.1|AYX22091.1|2168999_2169224_+|hypothetical-protein

2168999_2169224_+

74 aa aa

2092229-2208858

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
CP033699_5	Orphan	5.1\|3299986\|32\|CP033699\|CRISPRCasFinder	3299986-3300017	32	2137120-2137089	0
CP033699_5	Orphan	5.4\|3299987\|31\|CP033699\|CRT	3299987-3300017	31	2137119-2137089	0

1. spacer 5.1|3299986|32|CP033699|CRISPRCasFinder matches to CP033699 position: 2137120-2137089, mismatch: 0

tctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
tctgtacgcataccgccatcttgcatcagtct	Protospacer
********************************

2. spacer 5.4|3299987|31|CP033699|CRT matches to CP033699 position: 2137119-2137089, mismatch: 0

ctgtacgcataccgccatcttgcatcagtct	CRISPR spacer
ctgtacgcataccgccatcttgcatcagtct	Protospacer
*******************************

CP033699.1|AYX19886.1|2208914_2209103_+|hypothetical-protein

2208914_2209103_+

62 aa aa

CP033699.1|AYX19888.1|2212286_2212496_+|hypothetical-protein

2212286_2212496_+

69 aa aa

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033700

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033697

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP033699

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information