CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033705	Burkholderia pseudomallei strain FDAARGOS_592 chromosome 1, complete sequence	0 crisprs	DEDDh,cas3,WYL,RT,DinG,csa3	0	0	6	0
CP033706	Burkholderia pseudomallei strain FDAARGOS_592 chromosome 2, complete sequence	0 crisprs	csa3,cas3,DinG	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

25051 : 33900

Tanapox_virus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX33761.1\|25051_25894_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	2.1e-17	26.6
AYX33762.1\|26236_27160_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	8.4e-44	36.5
AYX33763.1\|27287_28640_+	lytic murein transglycosylase B	NA	NA	NA	NA
AYX33764.1\|28866_29769_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
AYX33765.1\|29780_30092_-	hypothetical protein	NA	NA	NA	NA
AYX33766.1\|30104_30422_-	competence protein ComE	NA	NA	NA	NA
AYX33767.1\|30493_31486_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
AYX33768.1\|31544_32531_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	6.7e-15	26.8
AYX33769.1\|32499_33900_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.1e-79	38.5

DBSCAN-SWA_2

366487 : 379879

Burkholderia_phage(12.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX34066.1\|366487_367708_-\|transposase	ISL3-like element ISBma1 family transposase	A9YX10	Burkholderia_phage	3.0e-238	99.5
AYX34067.1\|367852_368908_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SEW4	Cyanophage	4.9e-72	44.4
AYX34068.1\|369010_369205_-	hypothetical protein	NA	NA	NA	NA
AYX34069.1\|369206_369932_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AYX34070.1\|369953_370640_+	HAD-IB family hydrolase	NA	NA	NA	NA
AYX34071.1\|370636_372184_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
AYX34072.1\|372220_372748_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AYX34073.1\|372744_373428_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
AYX34074.1\|373492_374308_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
AYX34075.1\|374491_376498_-	chloride transporter	S4VT78	Pandoravirus	9.7e-53	35.0
AYX34076.1\|376531_377662_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	27.6
AYX34077.1\|377926_379879_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_3

666077 : 722063

Pseudomonas_phage(12.5%)

plate,tail,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX34344.1\|666077_667376_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
AYX34345.1\|667442_668525_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
AYX34346.1\|668568_669426_+	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA
AYX34347.1\|669505_669814_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
AYX34348.1\|669828_670425_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
AYX34349.1\|670708_671497_+	dioxygenase	NA	NA	NA	NA
AYX34350.1\|671472_671883_-	hypothetical protein	NA	NA	NA	NA
AYX34351.1\|671966_673568_-	APC family permease	NA	NA	NA	NA
AYX34352.1\|674001_674205_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
AYX34353.1\|674191_674329_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	NA	NA	NA
AYX34354.1\|674391_675654_-	Hsp70 family protein	NA	NA	NA	NA
AYX34355.1\|676307_676913_-	nitroreductase	NA	NA	NA	NA
AYX34356.1\|677398_678682_-	MFS transporter	NA	NA	NA	NA
AYX34357.1\|678840_679485_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYX34358.1\|679829_680453_+	DUF1415 domain-containing protein	NA	NA	NA	NA
AYX34359.1\|680537_681434_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AYX34360.1\|681561_682752_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AYX37337.1\|682694_682910_-	hypothetical protein	NA	NA	NA	NA
AYX34361.1\|682866_682980_+	aromatic ring-opening dioxygenase LigA	NA	NA	NA	NA
AYX34362.1\|683054_684173_-	acyltransferase	NA	NA	NA	NA
AYX34363.1\|684171_684651_+	hypothetical protein	NA	NA	NA	NA
AYX37338.1\|684610_685057_-	water stress/hypersensitive response domain-containing protein	NA	NA	NA	NA
AYX34364.1\|685417_685540_-	type I secretion protein TolC	NA	NA	NA	NA
AYX34365.1\|685583_685679_-	hypothetical protein	NA	NA	NA	NA
AYX34366.1\|685717_687883_+	peptidase M1	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
AYX34367.1\|687840_688101_-	hypothetical protein	NA	NA	NA	NA
AYX34368.1\|688464_688863_+	hypothetical protein	NA	NA	NA	NA
AYX34369.1\|688905_689175_+	hypothetical protein	NA	NA	NA	NA
AYX34370.1\|689277_689508_+	hypothetical protein	NA	NA	NA	NA
AYX34371.1\|689584_689767_-	hypothetical protein	NA	NA	NA	NA
AYX37339.1\|689741_690098_-	hypothetical protein	NA	NA	NA	NA
AYX34372.1\|690123_691392_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYX34373.1\|691406_693668_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
AYX34374.1\|693664_695113_+	TolC family protein	NA	NA	NA	NA
AYX34375.1\|695097_695247_+	flagellar protein FliO	NA	NA	NA	NA
AYX34376.1\|695322_696291_-\|tail	phage tail protein	NA	NA	NA	NA
AYX34377.1\|696302_697268_+	M15 family peptidase	NA	NA	NA	NA
AYX34378.1\|697285_697564_+	hypothetical protein	NA	NA	NA	NA
AYX34379.1\|697539_701433_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AYX34380.1\|701429_702419_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
AYX34381.1\|702423_703356_+	OmpA family protein	NA	NA	NA	NA
AYX34382.1\|703554_704676_-	type VI secretion system protein TssA	NA	NA	NA	NA
AYX34383.1\|704765_707435_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	2.9e-89	32.0
AYX34384.1\|707468_708569_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYX37340.1\|708532_710359_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX34385.1\|710450_710963_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYX34386.1\|710990_711494_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AYX34387.1\|711566_713057_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AYX34388.1\|713073_713592_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AYX34389.1\|713628_714300_-	lipoprotein	NA	NA	NA	NA
AYX34390.1\|714674_715289_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AYX34391.1\|715397_716744_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX34392.1\|716740_717526_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AYX34393.1\|717540_718014_-	restriction endonuclease subunit M	A0A142K7G3	Mycobacterium_phage	3.7e-11	44.0
AYX34394.1\|718010_718349_-	DUF4102 domain-containing protein	Q8W6M6	Sinorhizobium_phage	1.2e-16	48.0
AYX34395.1\|718320_718599_+	hypothetical protein	NA	NA	NA	NA
AYX34396.1\|718783_719584_+	hypothetical protein	NA	NA	NA	NA
AYX34397.1\|719590_720661_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AYX34398.1\|720943_722063_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5

DBSCAN-SWA_4

2022677 : 2033618

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX35560.1\|2022677_2024792_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
AYX35561.1\|2024916_2025096_-	hypothetical protein	NA	NA	NA	NA
AYX35562.1\|2025092_2025602_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
AYX35563.1\|2025782_2026001_-	hypothetical protein	NA	NA	NA	NA
AYX35564.1\|2026263_2026842_-	pseudouridine synthase	NA	NA	NA	NA
AYX35565.1\|2027109_2028369_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
AYX35566.1\|2028341_2028524_-	GNAT family acetyltransferase	NA	NA	NA	NA
AYX35567.1\|2028536_2030141_+	multicopper oxidase family protein	NA	NA	NA	NA
AYX35568.1\|2030270_2030474_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
AYX35569.1\|2031006_2031321_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
AYX35570.1\|2031317_2033618_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_5

2578920 : 2585714

Burkholderia_virus(33.33%)

integrase

attL 2576723:2576743|attR 2602461:2602481

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2576723:2576743	attL	NA	NA	NA	NA
AYX36066.1\|2578920_2579622_-	LysM peptidoglycan-binding domain-containing protein	A0A292GJG6	Xanthomonas_phage	9.9e-13	44.8
AYX36067.1\|2579918_2580827_-	aldose epimerase	NA	NA	NA	NA
AYX36068.1\|2581022_2581130_+	UDP pyrophosphate phosphatase	NA	NA	NA	NA
AYX36069.1\|2581374_2582205_+	undecaprenyl-diphosphatase 1	NA	NA	NA	NA
AYX36070.1\|2582513_2582942_-\|integrase	integrase	B9UDL9	Salmonella_phage	3.9e-20	43.2
AYX36071.1\|2582892_2583099_+	hypothetical protein	Q8W6S4	Burkholderia_virus	2.6e-14	82.2
AYX36072.1\|2583119_2583833_-	LysR family transcriptional regulator	A4PE26	Ralstonia_virus	1.5e-32	43.3
AYX37526.1\|2583841_2584348_-	hypothetical protein	NA	NA	NA	NA
AYX36073.1\|2584319_2584793_-	hypothetical protein	NA	NA	NA	NA
AYX36074.1\|2584785_2585292_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.9e-19	39.4
AYX36075.1\|2585288_2585714_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.3e-15	50.6
2602461:2602481	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3458722 : 3565912

119

Ralstonia_phage(25.58%)

tail,protease,capsid,tRNA,head,terminase,portal,integrase

attL 3478186:3478212|attR 3524607:3524633

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX36778.1\|3458722_3459994_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.4e-134	59.0
AYX36779.1\|3460154_3460808_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.1e-53	56.5
AYX36780.1\|3460942_3462292_-	trigger factor	NA	NA	NA	NA
AYX36781.1\|3462487_3462673_-	hypothetical protein	NA	NA	NA	NA
AYX36782.1\|3462744_3463908_+	glycerate kinase	NA	NA	NA	NA
AYX36783.1\|3464010_3464460_+	MarR family transcriptional regulator	NA	NA	NA	NA
AYX36784.1\|3464475_3464853_-	hypothetical protein	NA	NA	NA	NA
AYX36785.1\|3464849_3465851_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AYX36786.1\|3465934_3467083_-	DNA-binding response regulator	NA	NA	NA	NA
AYX36787.1\|3467147_3467333_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AYX36788.1\|3467413_3468481_+	porin	NA	NA	NA	NA
AYX36789.1\|3468504_3469698_+	MFS transporter	NA	NA	NA	NA
AYX37619.1\|3469841_3470864_+	class II histone deacetylase	A0A2K9L2T7	Tupanvirus	9.3e-36	31.0
AYX36790.1\|3471058_3471682_+	phospholipase D family protein	NA	NA	NA	NA
AYX36791.1\|3472884_3473391_+	exported avidin family protein	NA	NA	NA	NA
AYX36792.1\|3473466_3473700_+	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
AYX36793.1\|3473735_3473963_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
AYX36794.1\|3474216_3474612_+	hypothetical protein	NA	NA	NA	NA
AYX36795.1\|3474892_3475318_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.1e-14	47.0
AYX36796.1\|3475314_3475821_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	8.7e-19	39.4
AYX36797.1\|3476162_3476765_+	hypothetical protein	NA	NA	NA	NA
AYX36798.1\|3476771_3477494_+	LysR family transcriptional regulator	A4PE26	Ralstonia_virus	1.4e-30	39.9
AYX36799.1\|3477678_3477942_-	hypothetical protein	Q8W6S4	Burkholderia_virus	5.0e-26	85.5
3478186:3478212	attL	NA	NA	NA	NA
AYX36800.1\|3478230_3478470_-	DNA-binding protein	NA	NA	NA	NA
AYX36801.1\|3478494_3479040_+	lysozyme	A0A0A1I5L5	Burkholderia_phage	2.1e-26	43.0
AYX36802.1\|3479251_3479509_-	hypothetical protein	NA	NA	NA	NA
AYX36803.1\|3479540_3479732_-	hypothetical protein	NA	NA	NA	NA
AYX36804.1\|3479817_3480507_-	hypothetical protein	Q3HQV2	Burkholderia_phage	1.2e-71	59.5
AYX36805.1\|3480730_3483040_-	DNA-dependent RNA polymerase	A0A2R2ZGE5	Ralstonia_phage	3.8e-77	31.7
AYX36806.1\|3484358_3484550_-	hypothetical protein	NA	NA	NA	NA
AYX37620.1\|3484724_3485021_-	hypothetical protein	D2EBS7	Pseudomonas_phage	6.4e-30	70.0
AYX36807.1\|3485119_3485344_-	hypothetical protein	NA	NA	NA	NA
AYX36808.1\|3485473_3486265_-	RNase H superfamily protein	A0A2P0VPF6	Ralstonia_phage	1.6e-96	64.6
AYX36809.1\|3486261_3486651_-	hypothetical protein	A0A1L7DQG2	Ralstonia_phage	6.9e-24	58.6
AYX36810.1\|3486622_3487336_-	phosphodiesterase	A0A068Q5R1	Ralstonia_phage	1.3e-65	54.6
AYX36811.1\|3487823_3488654_-	hypothetical protein	A0A068Q6Y4	Ralstonia_phage	7.0e-66	55.5
AYX37621.1\|3488673_3491076_-	DNA polymerase A family protein	A0A068Q7T8	Ralstonia_phage	2.0e-294	62.9
AYX36812.1\|3491122_3491677_-	metal-dependent phosphohydrolase	A0A192Y8M4	Salmonella_phage	8.3e-39	48.9
AYX36813.1\|3491744_3491945_-	hypothetical protein	NA	NA	NA	NA
AYX36814.1\|3491944_3492874_-	ATP-dependent DNA ligase	A0A068Q5W4	Ralstonia_phage	8.7e-65	45.9
AYX36815.1\|3493164_3493470_-	hypothetical protein	NA	NA	NA	NA
AYX36816.1\|3493615_3494911_-	helicase DnaB	A0A068Q6G7	Ralstonia_phage	2.0e-152	61.3
AYX36817.1\|3495071_3495623_-	DNA primase	A0A077KVN4	Ralstonia_phage	2.4e-46	54.5
AYX36818.1\|3495902_3496109_-	transmembrane Fragile-X-F family protein	NA	NA	NA	NA
AYX36819.1\|3496105_3496393_-	hypothetical protein	NA	NA	NA	NA
AYX36820.1\|3496409_3496661_-	hypothetical protein	NA	NA	NA	NA
AYX36821.1\|3496660_3497032_-	hypothetical protein	A0A077KRW5	Ralstonia_phage	6.0e-09	40.8
AYX36822.1\|3497283_3497550_-	hypothetical protein	B5BTU9	Ralstonia_phage	1.9e-20	70.8
AYX36823.1\|3497708_3498365_-	hypothetical protein	NA	NA	NA	NA
AYX36824.1\|3498714_3498960_-	hypothetical protein	NA	NA	NA	NA
AYX36825.1\|3499733_3499937_-	hypothetical protein	NA	NA	NA	NA
AYX36826.1\|3500568_3501195_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AYX36827.1\|3501248_3501635_+	TM2 domain-containing protein	NA	NA	NA	NA
AYX37622.1\|3503158_3503632_+	TerS protein	A0A0F7L441	uncultured_marine_virus	6.7e-29	50.0
AYX36828.1\|3503628_3505218_+\|terminase	terminase large subunit	Q9MCV7	Escherichia_phage	2.5e-184	64.9
AYX36829.1\|3505237_3505831_+	peptidase U35	A0A0R6PGI7	Moraxella_phage	4.7e-32	47.1
AYX36830.1\|3505840_3507163_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	3.5e-75	42.0
AYX36831.1\|3507586_3508915_+\|portal	phage portal protein	A0A0R6PHI5	Moraxella_phage	1.1e-81	44.7
AYX36832.1\|3508907_3509198_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AYX36833.1\|3509194_3509569_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	2.8e-06	34.7
AYX36834.1\|3509561_3509918_+	DUF3168 domain-containing protein	NA	NA	NA	NA
AYX36835.1\|3509918_3510353_+\|tail	phage tail protein	NA	NA	NA	NA
AYX36836.1\|3510501_3510837_+	hypothetical protein	NA	NA	NA	NA
AYX36837.1\|3511164_3511608_+	hypothetical protein	A0A220NRP5	Escherichia_phage	8.2e-05	28.9
AYX37623.1\|3511754_3514427_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.8e-14	25.2
AYX36838.1\|3514423_3514768_+\|tail	phage tail protein	Q8W6T5	Burkholderia_virus	2.0e-14	41.7
AYX36839.1\|3514771_3516184_+\|tail	tail fiber domain-containing protein	Q8W6T4	Burkholderia_virus	1.5e-225	83.9
AYX36840.1\|3516174_3516855_+\|tail	phage minor tail protein L	A4JX13	Burkholderia_virus	1.7e-62	54.5
AYX36841.1\|3516851_3517592_+\|tail	phage tail protein	A4JX14	Burkholderia_virus	1.8e-76	53.0
AYX36842.1\|3517588_3518164_+\|tail	tail assembly protein	Q6JIL3	Burkholderia_virus	3.1e-44	50.8
AYX36843.1\|3518160_3521562_+	host specificity protein J	Q3HQU5	Burkholderia_phage	0.0e+00	57.0
AYX36844.1\|3521562_3521871_+	hypothetical protein	Q3HQU6	Burkholderia_phage	7.8e-47	88.2
AYX36845.1\|3521870_3522587_+	hypothetical protein	A4JX18	Burkholderia_virus	1.1e-112	79.4
AYX36846.1\|3522607_3522877_+	hypothetical protein	NA	NA	NA	NA
AYX36847.1\|3522876_3523197_+	hypothetical protein	NA	NA	NA	NA
AYX36848.1\|3523431_3524448_-\|integrase	integrase	A0A0A0YR56	Pseudomonas_phage	9.6e-49	39.8
AYX36849.1\|3524925_3525768_+	squalene synthase HpnD	NA	NA	NA	NA
3524607:3524633	attR	NA	NA	NA	NA
AYX36850.1\|3525808_3527065_-	DUF1501 domain-containing protein	NA	NA	NA	NA
AYX37624.1\|3527147_3528563_-	DUF1800 domain-containing protein	NA	NA	NA	NA
AYX36851.1\|3528806_3529145_-	hypothetical protein	NA	NA	NA	NA
AYX36852.1\|3529096_3529279_-	hypothetical protein	NA	NA	NA	NA
AYX36853.1\|3529366_3530092_+	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	8.1e-34	36.7
AYX36854.1\|3530158_3531517_+	HAMP domain-containing protein	NA	NA	NA	NA
AYX36855.1\|3531715_3532264_+	peroxiredoxin	NA	NA	NA	NA
AYX36856.1\|3532341_3532869_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AYX36857.1\|3533238_3533727_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AYX36858.1\|3533767_3534478_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AYX36859.1\|3534498_3538068_+	transcription-repair coupling factor	NA	NA	NA	NA
AYX37625.1\|3538713_3538953_-	hypothetical protein	NA	NA	NA	NA
AYX36860.1\|3538854_3539259_+	oxidoreductase	NA	NA	NA	NA
AYX36861.1\|3539302_3540520_+	acetylornithine deacetylase	NA	NA	NA	NA
AYX36862.1\|3540581_3541613_+	threonine/serine dehydratase	NA	NA	NA	NA
AYX36863.1\|3541805_3542057_-	hypothetical protein	NA	NA	NA	NA
AYX36864.1\|3542072_3542528_+	DUF3574 domain-containing protein	NA	NA	NA	NA
AYX36865.1\|3542547_3542805_-	lipid A biosynthesis acyltransferase	NA	NA	NA	NA
AYX36866.1\|3542758_3543058_-	hypothetical protein	NA	NA	NA	NA
AYX36867.1\|3543082_3545641_-	penicillin-binding protein 1A	NA	NA	NA	NA
AYX37626.1\|3545557_3545851_+	hypothetical protein	NA	NA	NA	NA
AYX36868.1\|3546120_3546801_+	PspA/IM30 family protein	NA	NA	NA	NA
AYX36869.1\|3546915_3548130_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AYX36870.1\|3548313_3548745_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AYX36871.1\|3549065_3549554_+	hypothetical protein	NA	NA	NA	NA
AYX36872.1\|3549735_3550623_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYX36873.1\|3550766_3550976_+	dodecin domain-containing protein	NA	NA	NA	NA
AYX36874.1\|3550941_3551166_-	hypothetical protein	NA	NA	NA	NA
AYX36875.1\|3551719_3552649_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYX36876.1\|3552912_3554343_-	8-oxoguanine deaminase	NA	NA	NA	NA
AYX37627.1\|3554358_3554592_+	transcriptional regulator	NA	NA	NA	NA
AYX36877.1\|3554902_3555262_+	hydroxyisourate hydrolase	NA	NA	NA	NA
AYX36878.1\|3555311_3556514_+	hypothetical protein	NA	NA	NA	NA
AYX36879.1\|3557379_3557892_-	ureidoglycolate lyase	NA	NA	NA	NA
AYX36880.1\|3557888_3558902_-	allantoicase	NA	NA	NA	NA
AYX36881.1\|3559130_3559655_-	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
AYX36882.1\|3559651_3560605_-	allantoinase PuuE	NA	NA	NA	NA
AYX36883.1\|3560750_3561716_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AYX36884.1\|3561726_3563259_-	NCS1 family nucleobase:cation symporter-1	NA	NA	NA	NA
AYX36885.1\|3563371_3564067_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYX36886.1\|3564390_3565332_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
AYX37628.1\|3565387_3565912_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.1e-05	31.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033706

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1322564 : 1390306

Aeromonas_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX38749.1\|1322564_1323515_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX38750.1\|1323782_1324727_+	GlxA family transcriptional regulator	NA	NA	NA	NA
AYX38751.1\|1325198_1326902_+	thermolysin metallopeptidase	NA	NA	NA	NA
AYX38752.1\|1327019_1328246_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
AYX38753.1\|1328300_1329443_-	porin	NA	NA	NA	NA
AYX40410.1\|1329670_1330669_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX40409.1\|1330704_1332258_-\|holin	choline-sulfatase	NA	NA	NA	NA
AYX38754.1\|1332393_1333293_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYX38755.1\|1333436_1334312_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AYX38756.1\|1334398_1336054_-	amino acid permease	NA	NA	NA	NA
AYX38757.1\|1336234_1337098_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX38758.1\|1337207_1338353_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYX38759.1\|1338373_1339642_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AYX38760.1\|1339666_1340452_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
AYX38761.1\|1340448_1341621_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
AYX38762.1\|1341625_1343551_-	DUF3483 domain-containing protein	NA	NA	NA	NA
AYX38763.1\|1343553_1345617_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AYX38764.1\|1345677_1346211_-	4-vinyl reductase	NA	NA	NA	NA
AYX38765.1\|1346361_1347333_-	membrane dipeptidase	NA	NA	NA	NA
AYX38766.1\|1347405_1348680_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	1.8e-105	54.1
AYX40411.1\|1348691_1348943_-	hypothetical protein	NA	NA	NA	NA
AYX38767.1\|1349112_1350138_+	GlxA family transcriptional regulator	NA	NA	NA	NA
AYX38768.1\|1350315_1351515_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
AYX38769.1\|1351989_1353006_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYX38770.1\|1353194_1354760_+	glycoside hydrolase family 68 protein	NA	NA	NA	NA
AYX38771.1\|1354892_1356557_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.1e-57	31.6
AYX38772.1\|1356551_1356929_-	hypothetical protein	NA	NA	NA	NA
AYX40412.1\|1357078_1358332_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYX38773.1\|1358566_1358755_+	hypothetical protein	NA	NA	NA	NA
AYX38774.1\|1359046_1360630_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
AYX38775.1\|1360626_1360809_-	hypothetical protein	NA	NA	NA	NA
AYX38776.1\|1360934_1361930_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AYX38777.1\|1362158_1363742_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
AYX38778.1\|1363738_1365058_-	glycosyltransferase	NA	NA	NA	NA
AYX38779.1\|1365065_1365194_-	hypothetical protein	NA	NA	NA	NA
AYX38780.1\|1365291_1366191_-	alpha/beta hydrolase	NA	NA	NA	NA
AYX38781.1\|1366470_1366644_+	hypothetical protein	NA	NA	NA	NA
AYX38782.1\|1366741_1367113_-	hypothetical protein	NA	NA	NA	NA
AYX38783.1\|1367337_1367769_-	hypothetical protein	NA	NA	NA	NA
AYX38784.1\|1367791_1368151_-	hypothetical protein	NA	NA	NA	NA
AYX38785.1\|1368209_1371713_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AYX38786.1\|1371709_1373425_-	hypothetical protein	NA	NA	NA	NA
AYX38787.1\|1373450_1374812_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AYX38788.1\|1374808_1375402_-	type VI secretion lipoprotein TssJ	NA	NA	NA	NA
AYX38789.1\|1375407_1375797_-	DUF4150 domain-containing protein	NA	NA	NA	NA
AYX38790.1\|1375839_1376556_-	DUF3540 domain-containing protein	NA	NA	NA	NA
AYX38791.1\|1376558_1377629_-	hypothetical protein	NA	NA	NA	NA
AYX38792.1\|1377628_1379845_-	DUF2169 domain-containing protein	NA	NA	NA	NA
AYX38793.1\|1379848_1382137_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
AYX38794.1\|1382302_1384594_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
AYX38795.1\|1384584_1387455_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
AYX38796.1\|1387457_1388447_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYX38797.1\|1388443_1390306_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_2

1553025 : 1564057

Burkholderia_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX38916.1\|1553025_1554201_-	hypothetical protein	A4JX31	Burkholderia_virus	1.9e-213	99.2
AYX38917.1\|1554197_1554347_-	bacteriophage protein Gp44	Q8W6Q6	Burkholderia_virus	3.3e-19	100.0
AYX38918.1\|1554597_1555188_+	hypothetical protein	A4JX33	Burkholderia_virus	2.5e-102	97.4
AYX38919.1\|1555377_1555644_+	hypothetical protein	Q8W6Q4	Burkholderia_virus	1.1e-41	97.6
AYX38920.1\|1555628_1555850_-	hypothetical protein	NA	NA	NA	NA
AYX38921.1\|1555876_1555984_-	hypothetical protein	Q6JIH6	Burkholderia_virus	8.2e-12	97.1
AYX38922.1\|1555985_1556117_-	bacteriophage protein Gp48	Q8W6Q2	Burkholderia_virus	2.6e-15	97.7
AYX38923.1\|1556126_1556402_-	bacteriophage protein Gp49	Q6JIH4	Burkholderia_virus	2.3e-42	96.7
AYX38924.1\|1557021_1557243_+	BrnT family toxin	NA	NA	NA	NA
AYX38925.1\|1557226_1557511_+	hypothetical protein	K4NZP3	Burkholderia_phage	1.4e-10	50.0
AYX38926.1\|1557819_1558017_-	hypothetical protein	NA	NA	NA	NA
AYX40427.1\|1557927_1558167_+	HNH endonuclease	Q8W6N0	Burkholderia_virus	4.8e-36	89.9
AYX38927.1\|1559181_1559679_+	hypothetical protein	NA	NA	NA	NA
AYX38928.1\|1559919_1560198_+	hypothetical protein	NA	NA	NA	NA
AYX38929.1\|1560107_1560524_-	type II toxin-antitoxin system HicB family antitoxin	A0A0A8JBA5	Ralstonia_phage	7.2e-27	60.0
AYX38930.1\|1560568_1560748_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.2e-18	74.6
AYX38931.1\|1561027_1561555_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	2.8e-60	66.7
AYX38932.1\|1561551_1562286_+	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	5.1e-52	50.5
AYX38933.1\|1562295_1563411_+	DUF3396 domain-containing protein	E5E3X7	Burkholderia_phage	4.2e-175	80.1
AYX40428.1\|1563481_1564057_-	recombinase family protein	A0A219Y9V9	Aeromonas_phage	1.0e-23	39.6

DBSCAN-SWA_3

2431922 : 2509485

Ralstonia_phage(15.38%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX39668.1\|2431922_2432471_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AYX39669.1\|2432475_2434347_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AYX40533.1\|2434343_2435822_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AYX39670.1\|2435800_2438467_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-78	30.7
AYX39671.1\|2438463_2440668_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
AYX39672.1\|2440683_2441394_+	hypothetical protein	NA	NA	NA	NA
AYX39673.1\|2441353_2442187_+	RHS repeat protein	NA	NA	NA	NA
AYX40534.1\|2442183_2442612_+	DUF746 domain-containing protein	NA	NA	NA	NA
AYX39674.1\|2443343_2444129_-	hypothetical protein	NA	NA	NA	NA
AYX39675.1\|2445519_2446578_+	LacI family transcriptional regulator	NA	NA	NA	NA
AYX39676.1\|2446574_2446787_-	hypothetical protein	NA	NA	NA	NA
AYX40535.1\|2446928_2448989_+	hypothetical protein	NA	NA	NA	NA
AYX39677.1\|2449031_2450276_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
AYX40536.1\|2450311_2451553_+	extracellular solute-binding protein	NA	NA	NA	NA
AYX39678.1\|2451584_2452538_+	sugar ABC transporter permease	NA	NA	NA	NA
AYX39679.1\|2452538_2453390_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AYX39680.1\|2453394_2455566_+	alpha-galactosidase	NA	NA	NA	NA
AYX39681.1\|2455806_2457840_+	hypothetical protein	NA	NA	NA	NA
AYX39682.1\|2458272_2458680_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.9e-12	36.5
AYX39683.1\|2458676_2459024_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.6e-41	73.8
AYX39684.1\|2460610_2461240_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	6.4e-27	38.1
AYX39685.1\|2461134_2461371_-	hypothetical protein	NA	NA	NA	NA
AYX39686.1\|2461446_2461788_+	peptidase S2	NA	NA	NA	NA
AYX39687.1\|2461681_2462572_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AYX39688.1\|2462703_2463417_+	FadR family transcriptional regulator	NA	NA	NA	NA
AYX39689.1\|2463427_2464630_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	6.9e-46	31.9
AYX39690.1\|2464667_2465666_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
AYX39691.1\|2465686_2466655_+	ABC transporter permease	NA	NA	NA	NA
AYX39692.1\|2466651_2467515_+	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-13	25.4
AYX39693.1\|2467529_2468300_+	SDR family oxidoreductase	NA	NA	NA	NA
AYX39694.1\|2468293_2469190_+	aldose 1-epimerase	NA	NA	NA	NA
AYX39695.1\|2469200_2470385_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AYX39696.1\|2470585_2472025_+	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA
AYX39697.1\|2472436_2473516_+	porin	NA	NA	NA	NA
AYX40537.1\|2473828_2474014_+	hypothetical protein	NA	NA	NA	NA
AYX39698.1\|2474752_2475190_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYX39699.1\|2476091_2476724_-	transcriptional regulator	NA	NA	NA	NA
AYX40538.1\|2476958_2478014_+	asparaginase	NA	NA	NA	NA
AYX39700.1\|2478128_2478539_+	RidA family protein	NA	NA	NA	NA
AYX39701.1\|2478563_2479163_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
AYX39702.1\|2480045_2481266_+\|transposase	ISL3-like element ISBma1 family transposase	A9YX10	Burkholderia_phage	4.6e-239	99.5
AYX40539.1\|2481316_2481610_-	hypothetical protein	NA	NA	NA	NA
AYX40540.1\|2482294_2482510_-	hypothetical protein	NA	NA	NA	NA
AYX39703.1\|2482477_2484682_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.9e-41	27.5
AYX39704.1\|2484697_2485966_+	hypothetical protein	NA	NA	NA	NA
AYX40541.1\|2485979_2490611_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
AYX40542.1\|2491203_2491467_+	hypothetical protein	NA	NA	NA	NA
AYX39705.1\|2491467_2491665_+	hypothetical protein	NA	NA	NA	NA
AYX39706.1\|2491816_2501128_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
AYX39707.1\|2501134_2501464_+	colicin immunity protein	NA	NA	NA	NA
AYX40543.1\|2501975_2503745_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
AYX39708.1\|2503744_2504884_+	DUF746 domain-containing protein	NA	NA	NA	NA
AYX39709.1\|2505248_2505506_+	hypothetical protein	NA	NA	NA	NA
AYX39710.1\|2505515_2506244_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
AYX40544.1\|2506424_2507078_-	glutathione S-transferase	NA	NA	NA	NA
AYX39711.1\|2507103_2508537_-	chrolohydrolase	NA	NA	NA	NA
AYX39712.1\|2508575_2508710_-	CurM	NA	NA	NA	NA
AYX39713.1\|2508756_2509485_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033705

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033706

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection