CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP033821	Klebsiella aerogenes strain FDAARGOS_513 plasmid unnamed4	0 crisprs	NA	0
CP033817	Klebsiella aerogenes strain FDAARGOS_513 chromosome, complete genome	0 crisprs	DEDDh,cas3,csa3,DinG,WYL	4
CP033819	Klebsiella aerogenes strain FDAARGOS_513 plasmid unnamed2	0 crisprs	NA	0
CP033820	Klebsiella aerogenes strain FDAARGOS_513 plasmid unnamed3	0 crisprs	NA	0
CP033818	Klebsiella aerogenes strain FDAARGOS_513 plasmid unnamed1, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

810542 : 878743

Escherichia_phage(31.11%)

capsid,holin,terminase,integrase,head,plate,tRNA,lysis,portal,tail,protease

attL 843863:843906|attR 874525:874568

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX99309.1\|810542_811643_+\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
AYX99310.1\|811695_812055_-	YijD family membrane protein	NA	NA	NA	NA
AYX99311.1\|812070_812706_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA
AYX99312.1\|812902_814303_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
AYX99313.1\|814285_815203_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA
AYX99314.1\|815454_816828_-	argininosuccinate lyase	NA	NA	NA	NA
AYX99315.1\|816929_817706_-	acetylglutamate kinase	NA	NA	NA	NA
AYX99316.1\|817715_818720_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
AYX99317.1\|818833_819985_+	acetylornithine deacetylase	NA	NA	NA	NA
AYX99318.1\|820242_822894_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AYX99319.1\|822940_823591_-	metal-binding protein ZinT	NA	NA	NA	NA
AYX99320.1\|823737_824595_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYX99321.1\|824800_825463_+	fructose-6-phosphate aldolase	M4SLG0	Cyanophage	1.0e-27	33.5
AYX99322.1\|825517_826621_+	glycerol dehydrogenase	NA	NA	NA	NA
AYX99323.1\|826658_827573_-	DMT family transporter	NA	NA	NA	NA
AYX99324.1\|827724_828612_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA
AYX99325.1\|828913_831346_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA
AYX99326.1\|831348_832509_-	cystathionine gamma-synthase	NA	NA	NA	NA
AYX99327.1\|832774_833092_+	met repressor	NA	NA	NA	NA
AYX99328.1\|833193_833406_-	50S ribosomal protein L31	NA	NA	NA	NA
AYX99329.1\|833666_835862_+	primosomal protein N'	NA	NA	NA	NA
AYX99330.1\|836011_837040_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
AYX99331.1\|837133_838102_+	cell division protein FtsN	NA	NA	NA	NA
AYX99332.1\|838193_838724_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AYX99333.1\|838733_840068_+	HslU--HslV peptidase ATPase subunit	W6AS21	Erwinia_phage	2.1e-43	29.9
AYY03353.1\|840135_841062_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
AYX99334.1\|841154_841640_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
AYX99335.1\|841708_842671_-	6-phosphofructokinase	NA	NA	NA	NA
AYX99336.1\|842874_843771_-	CDF family cation-efflux pump FieF	NA	NA	NA	NA
843863:843906	attL	NA	NA	NA	NA
AYX99337.1\|844067_844484_+	hypothetical protein	S4TTB4	Salmonella_phage	5.7e-32	51.5
AYX99338.1\|844519_844738_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	6.8e-37	97.2
AYX99339.1\|844816_845983_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.4e-205	95.1
AYX99340.1\|845979_846465_-\|tail	phage tail protein	O80317	Escherichia_phage	1.9e-79	93.7
AYX99341.1\|846479_848921_-\|tail	phage tail tape measure protein	A0A0M3UL85	Salmonella_phage	0.0e+00	86.8
AYX99342.1\|848913_849069_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	4.8e-21	94.1
AYX99343.1\|849065_849401_-\|tail	phage tail assembly protein	Q37846	Escherichia_phage	4.0e-44	85.3
AYX99344.1\|849463_849982_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	9.4e-93	99.4
AYX99345.1\|849997_851176_-\|tail	phage tail sheath protein	Q37844	Escherichia_phage	1.6e-212	94.6
AYX99346.1\|851307_851925_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	1.1e-52	54.6
AYY03354.1\|851924_852878_-	hypothetical protein	M1TAS6	Escherichia_phage	2.8e-34	53.8
AYX99347.1\|853810_854419_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	1.6e-107	93.1
AYX99348.1\|854411_855320_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	2.0e-154	96.7
AYX99349.1\|855326_855674_-\|plate	baseplate assembly protein	A0A218M4K8	Erwinia_phage	7.5e-54	94.8
AYX99350.1\|855670_856312_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	4.4e-108	93.4
AYX99351.1\|856380_856830_-	phage virion morphogenesis protein	O80313	Escherichia_phage	1.4e-68	94.6
AYX99352.1\|856822_857290_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	2.1e-83	98.7
AYY03355.1\|857252_857516_-\|holin	holin	S4TNY4	Salmonella_phage	8.8e-39	92.0
AYX99353.1\|857397_857811_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	6.2e-63	93.4
AYX99354.1\|857807_858305_-	lysozyme	S4TUB1	Salmonella_phage	3.9e-88	93.3
AYX99355.1\|858291_858588_-\|holin	holin	A0A0M5M1H1	Salmonella_phage	1.9e-45	95.9
AYX99356.1\|858590_858794_-\|tail	phage tail protein	A0A0M3ULF4	Salmonella_phage	8.3e-29	91.0
AYX99357.1\|858793_859303_-\|head	head completion/stabilization protein	A0A218M4L7	Erwinia_phage	3.1e-88	95.3
AYX99358.1\|859396_860146_-\|terminase	terminase	O80305	Escherichia_phage	1.0e-111	90.8
AYX99359.1\|860150_861218_-\|capsid	phage major capsid protein, P2 family	O80304	Escherichia_phage	1.8e-194	97.2
AYX99360.1\|861294_862149_-\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	2.5e-143	90.5
AYX99361.1\|862314_864084_+	oxidoreductase	A0A218M4M1	Erwinia_phage	0.0e+00	97.5
AYX99362.1\|864085_865132_+\|portal	phage portal protein	A0A2I8TV74	Erwinia_phage	8.3e-189	94.3
AYX99363.1\|865558_866653_+	hypothetical protein	Q7Y4B3	Escherichia_virus	3.2e-127	63.6
AYX99364.1\|866649_867579_+	hypothetical protein	Q7Y4B4	Escherichia_virus	5.6e-96	50.6
AYX99365.1\|867575_868514_-	DNA (cytosine-5-)-methyltransferase	Q7Y4B5	Escherichia_virus	1.0e-158	82.7
AYX99366.1\|868624_870898_-	replication endonuclease	S4TTC1	Salmonella_phage	0.0e+00	76.2
AYX99367.1\|870887_871163_-	hypothetical protein	M1TAP2	Escherichia_phage	7.0e-31	74.4
AYX99368.1\|871159_871384_-	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	2.3e-24	75.7
AYX99369.1\|871388_871685_-	hypothetical protein	M1RZ07	Escherichia_phage	9.6e-26	68.5
AYX99370.1\|871684_871909_-	DUF2732 family protein	Q7Y4C2	Escherichia_virus	1.5e-23	79.7
AYX99371.1\|871972_872473_-	replication protein B	M1SV55	Escherichia_phage	5.3e-85	91.0
AYX99372.1\|872642_872915_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.1e-39	83.3
AYX99373.1\|873062_873356_+	XRE family transcriptional regulator	Q1JS45	Enterobacteria_phage	2.1e-33	70.1
AYX99374.1\|873425_874406_+\|integrase	integrase	S4TP66	Salmonella_phage	2.8e-178	95.1
AYX99375.1\|874591_875095_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
874525:874568	attR	NA	NA	NA	NA
AYX99376.1\|875244_875943_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	4.0e-06	30.3
AYX99377.1\|875939_877313_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	1.4e-10	24.0
AYX99378.1\|877375_878050_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
AYX99379.1\|878122_878743_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	1.2e-62	58.4

DBSCAN-SWA_2

1536151 : 1544368

uncultured_Caudovirales_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYX99979.1\|1536151_1537372_+	DUF4102 domain-containing protein	A0A2H4JB45	uncultured_Caudovirales_phage	3.6e-175	69.8
AYX99980.1\|1537368_1538244_+	hypothetical protein	NA	NA	NA	NA
AYY03378.1\|1538353_1538563_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	5.5e-28	88.4
AYY03379.1\|1539122_1539395_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	1.0e-34	76.7
AYX99981.1\|1539387_1539612_+	aminotransferase	A0A2H4JBA1	uncultured_Caudovirales_phage	6.8e-16	74.1
AYX99982.1\|1539608_1539977_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.1e-50	82.8
AYX99983.1\|1539973_1541344_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	2.0e-203	79.0
AYX99984.1\|1541580_1542048_-	hypothetical protein	NA	NA	NA	NA
AYX99985.1\|1542263_1542458_+	hypothetical protein	NA	NA	NA	NA
AYX99986.1\|1542454_1544368_+	peptidase	K7PKX4	Enterobacterial_phage	2.0e-212	57.4

DBSCAN-SWA_3

2245558 : 2346171

110

Salmonella_phage(24.24%)

capsid,holin,terminase,head,tRNA,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY00640.1\|2245558_2247892_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	85.2
AYY00641.1\|2247906_2248227_-	hypothetical protein	NA	NA	NA	NA
AYY00642.1\|2248223_2248451_-	hypothetical protein	NA	NA	NA	NA
AYY00643.1\|2248447_2248999_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.4e-32	72.2
AYY00644.1\|2249684_2250545_+\|capsid	capsid protein	NA	NA	NA	NA
AYY00645.1\|2250548_2250788_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.7e-20	61.7
AYY00646.1\|2250803_2251370_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.3e-60	65.4
AYY00647.1\|2251366_2251612_-	hypothetical protein	NA	NA	NA	NA
AYY00648.1\|2251694_2252756_+	hypothetical protein	A0A2I7RNF6	Vibrio_phage	1.0e-53	37.7
AYY00649.1\|2252806_2254765_-	NACHT domain-containing protein	X5JAK5	Clostridium_phage	3.2e-77	33.6
AYY00650.1\|2254774_2255971_-	DUF4102 domain-containing protein	A0A1B5FPC6	Escherichia_phage	4.3e-109	51.0
AYY00651.1\|2256247_2257438_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	2.2e-145	67.2
AYY00652.1\|2257398_2257605_-	excisionase	I6PBM8	Cronobacter_phage	2.4e-23	73.8
AYY00653.1\|2257644_2258202_-	hypothetical protein	A0A1B0V865	Salmonella_phage	1.7e-15	37.0
AYY00654.1\|2258495_2258891_-	hypothetical protein	K7P881	Enterobacteria_phage	4.1e-16	55.9
AYY00655.1\|2258890_2259367_-	hypothetical protein	NA	NA	NA	NA
AYY00656.1\|2259644_2260094_-	hypothetical protein	NA	NA	NA	NA
AYY00657.1\|2260215_2260413_-	hypothetical protein	NA	NA	NA	NA
AYY00658.1\|2260412_2260940_-	HD family hydrolase	A0A192Y8M4	Salmonella_phage	6.7e-62	68.6
AYY00659.1\|2261071_2261902_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	3.2e-127	82.7
AYY00660.1\|2261954_2262326_-	hypothetical protein	Q8HAA1	Salmonella_phage	3.7e-51	81.3
AYY00661.1\|2263235_2263469_-	hypothetical protein	Q56BD7	Escherichia_virus	7.3e-05	38.2
AYY00662.1\|2263655_2264300_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	5.3e-37	39.2
AYY00663.1\|2264394_2264604_+	cell division protein	NA	NA	NA	NA
AYY00664.1\|2264632_2265190_+	DNA-binding protein	A0A1C9II13	Salmonella_phage	4.3e-67	68.7
AYY00665.1\|2265186_2265384_+	hypothetical protein	NA	NA	NA	NA
AYY03400.1\|2265388_2266084_+	phage regulatory protein/antirepressor Ant	A0A2I7RHG4	Vibrio_phage	5.5e-48	51.4
AYY00666.1\|2266085_2266265_+	DUF4222 domain-containing protein	NA	NA	NA	NA
AYY00667.1\|2266261_2267158_+	GntR family transcriptional regulator	K7PLZ7	Enterobacterial_phage	2.6e-34	55.3
AYY00668.1\|2267154_2268045_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.6e-124	72.4
AYY00669.1\|2268037_2270005_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	8.5e-211	56.4
AYY00670.1\|2270001_2271054_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.1e-111	56.2
AYY00671.1\|2271072_2271903_+	antitermination protein	K7P7B9	Enterobacteria_phage	2.3e-56	47.2
AYY00672.1\|2272113_2272308_+	TrmB family transcriptional regulator	Q9MC00	Enterobacteria_phage	1.1e-22	81.5
AYY00673.1\|2272456_2273506_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	2.9e-165	75.5
AYY00674.1\|2273958_2274381_+	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	2.2e-52	78.5
AYY00675.1\|2274377_2274533_+	DUF3927 domain-containing protein	A0A0A0YRI9	Escherichia_phage	1.9e-09	70.8
AYY00676.1\|2274639_2275026_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	1.2e-57	93.8
AYY00677.1\|2275012_2275294_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	8.0e-22	51.6
AYY00678.1\|2275293_2275923_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	9.3e-87	75.8
AYY00679.1\|2275925_2276201_+	hypothetical protein	G8C7W1	Escherichia_phage	6.4e-24	64.4
AYY00680.1\|2276190_2276340_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.8e-15	88.1
AYY00681.1\|2276506_2276800_+	hypothetical protein	G8C7W3	Escherichia_phage	2.2e-30	71.1
AYY00682.1\|2276864_2277110_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	2.3e-33	93.8
AYY00683.1\|2277181_2277403_+	hypothetical protein	NA	NA	NA	NA
AYY00684.1\|2277873_2279331_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	2.8e-211	71.8
AYY00685.1\|2279312_2279906_+	hypothetical protein	S4TR53	Salmonella_phage	8.8e-79	71.6
AYY00686.1\|2279898_2280267_+	HNH endonuclease	S4TTG9	Salmonella_phage	5.7e-52	81.7
AYY00687.1\|2280446_2280956_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	1.3e-51	68.0
AYY00688.1\|2280959_2282618_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	4.0e-238	72.8
AYY00689.1\|2282675_2284610_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	0.0e+00	94.9
AYY00690.1\|2284815_2286171_+\|portal	phage portal protein	S4TTG7	Salmonella_phage	7.8e-232	87.1
AYY00691.1\|2286167_2287211_+\|head,tail	phage gp6-like head-tail connector protein	S4TNN1	Salmonella_phage	7.4e-105	80.4
AYY00692.1\|2287207_2287534_+\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	2.8e-26	59.3
AYY00693.1\|2287604_2287802_+	hypothetical protein	K7PGR0	Enterobacteria_phage	1.3e-18	78.5
AYY00694.1\|2287803_2288136_+\|head,tail	head-tail adaptor protein	K7PH08	Enterobacteria_phage	2.7e-45	82.7
AYY00695.1\|2288128_2288668_+	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	1.8e-78	81.9
AYY00696.1\|2288664_2289030_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	4.6e-54	81.0
AYY00697.1\|2289088_2289571_+\|tail	phage tail protein	Q9MCU9	Escherichia_phage	7.5e-52	58.6
AYY00698.1\|2289613_2289967_+\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	8.4e-53	85.5
AYY00699.1\|2289999_2290263_+\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	1.0e-39	88.5
AYY00700.1\|2290279_2290690_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	1.8e-51	74.0
AYY00701.1\|2290751_2293184_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	81.8
AYY00702.1\|2293183_2293663_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.0e-61	67.5
AYY00703.1\|2293649_2294132_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.7e-62	73.8
AYY00704.1\|2294141_2294522_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	5.5e-58	78.6
AYY03401.1\|2295007_2297554_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	70.2
AYY00705.1\|2299552_2300305_+	hypothetical protein	A0A286S1R5	Klebsiella_phage	3.9e-47	44.5
AYY00706.1\|2300772_2301063_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.7e-11	43.5
AYY00707.1\|2301062_2301968_+	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	2.2e-137	61.1
AYY00708.1\|2301960_2302377_-	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	7.9e-42	54.7
AYY00709.1\|2302817_2303792_-	DUF4760 domain-containing protein	A0A1B5FPC5	Escherichia_phage	4.2e-70	52.3
AYY03402.1\|2304405_2304813_-	hypothetical protein	NA	NA	NA	NA
AYY00710.1\|2305525_2306008_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	46.8
AYY00711.1\|2306122_2306599_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AYY00712.1\|2306588_2306879_+	RnfH family protein	NA	NA	NA	NA
AYY00713.1\|2306942_2307281_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AYY00714.1\|2307428_2309090_-	DNA repair protein RecN	NA	NA	NA	NA
AYY00715.1\|2309176_2310055_-	NAD(+) kinase	NA	NA	NA	NA
AYY00716.1\|2310178_2310769_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AYY00717.1\|2310870_2312157_-	DUF21 domain-containing protein	NA	NA	NA	NA
AYY00718.1\|2312174_2312966_-	inner membrane protein YpjD	NA	NA	NA	NA
AYY00719.1\|2313132_2314497_+	signal recognition particle protein	NA	NA	NA	NA
AYY00720.1\|2314828_2315077_+	30S ribosomal protein S16	NA	NA	NA	NA
AYY00721.1\|2315095_2315644_+	ribosome maturation factor RimM	NA	NA	NA	NA
AYY00722.1\|2315675_2316443_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AYY00723.1\|2316482_2316830_+	50S ribosomal protein L19	NA	NA	NA	NA
AYY00724.1\|2316950_2317400_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AYY00725.1\|2317456_2318827_+	PepSY domain-containing protein	NA	NA	NA	NA
AYY00726.1\|2318832_2319312_-	OmpA family protein	NA	NA	NA	NA
AYY00727.1\|2319324_2320548_-	diguanylate cyclase	NA	NA	NA	NA
AYY00728.1\|2320540_2321227_-	YfiR family protein	NA	NA	NA	NA
AYY00729.1\|2321393_2322464_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.0e-89	51.4
AYY00730.1\|2322473_2323595_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AYY00731.1\|2323663_2324536_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AYY00732.1\|2324532_2325693_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AYY03403.1\|2325794_2325842_-	hypothetical protein	NA	NA	NA	NA
AYY00733.1\|2325956_2326292_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AYY00734.1\|2326564_2327302_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AYY00735.1\|2327433_2328414_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AYY00736.1\|2328410_2329142_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AYY00737.1\|2329271_2331845_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.0e-127	35.4
AYY00738.1\|2337360_2337558_-	hypothetical protein	NA	NA	NA	NA
AYY00739.1\|2337872_2339171_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.5e-43	30.2
AYY00740.1\|2339173_2339497_-	YfiM family lipoprotein	NA	NA	NA	NA
AYY00741.1\|2339539_2340895_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AYY00742.1\|2340991_2343667_-	protein lysine acetyltransferase	NA	NA	NA	NA
AYY00743.1\|2343702_2344401_-	DTW domain-containing protein	NA	NA	NA	NA
AYY00744.1\|2344470_2344896_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	3.5e-13	39.0
AYY00745.1\|2345100_2346171_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_4

2412546 : 2480352

Salmonella_phage(38.78%)

holin,terminase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY00808.1\|2412546_2414013_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.8e-88	38.7
AYY00809.1\|2414082_2415660_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
AYY00810.1\|2415852_2417103_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	2.2e-196	81.4
AYY00811.1\|2417119_2417428_-	hypothetical protein	I6PD68	Cronobacter_phage	1.6e-23	53.9
AYY00812.1\|2417427_2417730_-	hypothetical protein	NA	NA	NA	NA
AYY00813.1\|2417726_2418317_-	adenine methylase	T1SA14	Salmonella_phage	4.0e-108	92.8
AYY00814.1\|2418309_2418606_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	5.2e-32	69.7
AYY00815.1\|2418715_2418964_-	AlpA family phage regulatory protein	A0A193GYW1	Enterobacter_phage	8.5e-36	85.4
AYY00816.1\|2419014_2419896_-	recombinase RecT	T1SBJ5	Salmonella_phage	1.3e-139	86.3
AYY00817.1\|2419892_2420714_-	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	7.5e-153	93.4
AYY03405.1\|2420925_2421225_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	6.1e-20	49.5
AYY00818.1\|2421527_2422115_-	helix-turn-helix domain-containing protein	G9L6A6	Escherichia_phage	6.3e-61	61.0
AYY00819.1\|2422269_2422500_+	hypothetical protein	A0A193GYK6	Enterobacter_phage	3.0e-35	90.8
AYY00820.1\|2422648_2422858_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	8.0e-27	81.2
AYY00821.1\|2422857_2423625_+	primosomal protein	A0A193GZ86	Enterobacter_phage	7.0e-137	88.6
AYY00822.1\|2423621_2424407_+	replication protein	A0A193GYX1	Enterobacter_phage	1.4e-137	89.3
AYY00823.1\|2424526_2424871_+	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	2.4e-52	86.0
AYY00824.1\|2425060_2425642_+	hypothetical protein	NA	NA	NA	NA
AYY00825.1\|2425638_2425902_+	DUF4752 family protein	T1S9K2	Salmonella_phage	2.2e-29	75.6
AYY00826.1\|2428112_2428343_+	hypothetical protein	A0A2P1MXF0	Escherichia_phage	1.3e-17	54.7
AYY00827.1\|2428342_2428681_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.6e-48	85.5
AYY03406.1\|2428756_2429086_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.0e-28	60.7
AYY00828.1\|2429143_2429728_+\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	1.2e-85	84.5
AYY00829.1\|2429724_2431194_+\|terminase	terminase	Q858H3	Salmonella_phage	2.0e-281	94.1
AYY00830.1\|2431229_2431505_-	hypothetical protein	NA	NA	NA	NA
AYY00831.1\|2432163_2432370_+	hypothetical protein	T1SA67	Salmonella_phage	1.0e-05	79.4
AYY00832.1\|2432384_2434064_+\|tail	phage tail protein	T1S9Z7	Salmonella_phage	2.4e-262	81.2
AYY00833.1\|2434060_2434357_+	hypothetical protein	T1SBI9	Salmonella_phage	8.6e-35	72.4
AYY00834.1\|2434362_2434632_+	hypothetical protein	V5KSC6	Escherichia_phage	3.1e-23	83.8
AYY00835.1\|2434642_2435341_+	peptidase	G9L6C4	Escherichia_phage	4.8e-76	86.2
AYY00836.1\|2435355_2436342_+	hypothetical protein	A0A193GZ49	Enterobacter_phage	5.2e-177	93.6
AYY00837.1\|2436395_2436833_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.8e-68	93.1
AYY00838.1\|2436843_2437191_+	hypothetical protein	G9L6C7	Escherichia_phage	4.1e-36	68.7
AYY00839.1\|2437241_2437565_+	hypothetical protein	G9L6C8	Escherichia_phage	3.1e-46	86.0
AYY00840.1\|2437564_2438170_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	8.1e-88	78.0
AYY00841.1\|2438169_2440647_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.6
AYY00842.1\|2440646_2441111_+	hypothetical protein	T1SA73	Salmonella_phage	9.6e-73	81.8
AYY00843.1\|2441110_2441653_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	5.3e-54	66.1
AYY00844.1\|2441664_2444199_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	82.5
AYY00845.1\|2444198_2445764_+	hypothetical protein	Q858F9	Salmonella_phage	6.1e-220	66.9
AYY00846.1\|2445763_2448529_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.9
AYY00847.1\|2448665_2449055_+	hypothetical protein	NA	NA	NA	NA
AYY03407.1\|2449074_2449386_+	hypothetical protein	NA	NA	NA	NA
AYY00848.1\|2449410_2449950_-	DUF4760 domain-containing protein	NA	NA	NA	NA
AYY00849.1\|2450229_2450910_-	BRO-like protein	A0A193GYJ9	Enterobacter_phage	8.6e-78	62.7
AYY00850.1\|2451227_2451488_-	hypothetical protein	T1SA06	Salmonella_phage	1.9e-33	82.4
AYY00851.1\|2451681_2454069_+\|tail	phage tail protein	R9TMK5	Aeromonas_phage	7.6e-89	37.5
AYY00852.1\|2454072_2454333_+	hypothetical protein	L0ARW5	Klebsiella_phage	6.2e-21	56.6
AYY00853.1\|2454422_2454827_+	hypothetical protein	T1SA79	Salmonella_phage	3.2e-56	83.6
AYY00854.1\|2454813_2455119_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	6.0e-39	81.4
AYY00855.1\|2455108_2455738_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	4.8e-99	84.7
AYY00856.1\|2455734_2456235_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	5.9e-60	76.9
AYY00857.1\|2456469_2456703_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AYY00858.1\|2456733_2457066_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
AYY00859.1\|2457100_2458309_-	MFS transporter	NA	NA	NA	NA
AYY00860.1\|2458407_2459301_+	LysR family transcriptional regulator	NA	NA	NA	NA
AYY00861.1\|2459304_2459514_-	DUF2633 family protein	G9L6F2	Escherichia_phage	2.5e-20	76.7
AYY00862.1\|2459866_2462098_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AYY00863.1\|2462146_2463673_-	exopolyphosphatase	NA	NA	NA	NA
AYY00864.1\|2463676_2465737_-	polyphosphate kinase 1	NA	NA	NA	NA
AYY03408.1\|2465914_2467573_+	hypothetical protein	NA	NA	NA	NA
AYY00865.1\|2467578_2468676_-	glycoside hydrolase family 105 protein	NA	NA	NA	NA
AYY00866.1\|2468650_2470102_-	MFS transporter	NA	NA	NA	NA
AYY00867.1\|2470522_2471863_+	glycoside hydrolase family 28 protein	NA	NA	NA	NA
AYY00868.1\|2471916_2472558_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.9e-31	42.8
AYY00869.1\|2472554_2473592_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.1e-71	44.5
AYY00870.1\|2473699_2473819_+	hypothetical protein	NA	NA	NA	NA
AYY00871.1\|2473841_2475272_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
AYY00872.1\|2475468_2476095_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AYY00873.1\|2476191_2477478_+	uracil permease	Q9KX94	Enterobacteria_phage	8.3e-66	38.1
AYY00874.1\|2477576_2478278_+	DnaA inactivator Hda	NA	NA	NA	NA
AYY00875.1\|2478519_2478879_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AYY00876.1\|2478888_2480352_-\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage