CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP033781	Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed1, complete sequence	0 crisprs	RT	1
CP033782	Staphylococcus epidermidis strain FDAARGOS_529 chromosome, complete genome	0 crisprs	WYL,csa3,cas3,DEDDh,DinG	6
CP033783	Staphylococcus epidermidis strain FDAARGOS_529 plasmid unnamed2, complete sequence	0 crisprs	NA	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1202788 : 1268480

Staphylococcus_phage(70.15%)

terminase,tail,capsid,head,transposase,portal,tRNA,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY62074.1\|1202788_1203994_-	dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	6.3e-92	46.2
AYY62075.1\|1204017_1205394_-	recombinase family protein	A0A1W6JP94	Staphylococcus_phage	6.1e-248	96.3
AYY62076.1\|1205447_1206029_-	hypothetical protein	A0A1W6JQH1	Staphylococcus_phage	4.8e-29	86.6
AYY62077.1\|1206030_1206540_-	hypothetical protein	NA	NA	NA	NA
AYY62078.1\|1206595_1207207_-	helix-turn-helix domain-containing protein	B5WZL2	Staphylococcus_phage	9.3e-100	88.7
AYY62079.1\|1207378_1207606_+	BetR domain protein	B5WZL3	Staphylococcus_phage	8.1e-33	97.3
AYY62080.1\|1207630_1208077_+	hypothetical protein	A0A1W6JNN0	Staphylococcus_phage	3.4e-59	71.6
AYY62081.1\|1208090_1208270_+	hypothetical protein	A0A0N9BAV3	Staphylococcus_phage	4.6e-23	91.5
AYY62082.1\|1208259_1208499_-	hypothetical protein	A0A0H3U4W2	Staphylococcus_phage	1.5e-40	94.9
AYY62083.1\|1208545_1209319_+	transcriptional regulator	A0A2D1G5J2	Staphylococcus_phage	1.7e-122	84.1
AYY62084.1\|1209617_1209800_+	hypothetical protein	I6T7K4	Staphylococcus_virus	1.2e-18	94.3
AYY62085.1\|1209803_1210091_+	XRE family transcriptional regulator	H9A0L0	Staphylococcus_phage	2.4e-34	71.6
AYY62086.1\|1210173_1210428_+	hypothetical protein	H9A0R3	Staphylococcus_phage	1.7e-18	76.3
AYY62087.1\|1210420_1210906_+	siphovirus Gp157 family protein	A0A2H4JCW3	uncultured_Caudovirales_phage	9.7e-76	95.0
AYY62088.1\|1210906_1211683_+	ATP-binding protein	Q8SDW5	Staphylococcus_phage	3.9e-127	88.4
AYY62089.1\|1211711_1212236_+	DUF669 domain-containing protein	A9CR64	Staphylococcus_phage	4.6e-71	77.6
AYY62090.1\|1212250_1212925_+	hypothetical protein	A9CR65	Staphylococcus_phage	3.0e-107	78.6
AYY62091.1\|1212921_1213641_+	helix-turn-helix domain-containing protein	A0A2H4IYS0	uncultured_Caudovirales_phage	8.7e-105	97.5
AYY62092.1\|1213653_1214424_+	AAA family ATPase	A0A1W6JP70	Staphylococcus_phage	3.1e-140	96.9
AYY62093.1\|1214578_1214824_+	hypothetical protein	A0A141VTS2	Staphylococcus_phage	1.1e-40	100.0
AYY62094.1\|1214833_1215244_+	DUF1064 domain-containing protein	A0A2I2MUI3	uncultured_Caudovirales_phage	2.3e-70	95.6
AYY62095.1\|1215240_1215426_+	hypothetical protein	A0A2H4JA33	uncultured_Caudovirales_phage	2.9e-20	82.0
AYY62096.1\|1215426_1215840_+	hypothetical protein	A0A2H4JCH2	uncultured_Caudovirales_phage	4.1e-59	86.1
AYY62097.1\|1215836_1216292_+	DUF3310 domain-containing protein	I6SB23	Staphylococcus_virus	1.4e-79	95.4
AYY62098.1\|1216296_1216527_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	1.4e-32	98.7
AYY63324.1\|1216532_1217147_+	HNH endonuclease	A0A2H4JEM6	uncultured_Caudovirales_phage	4.3e-113	97.5
AYY62099.1\|1217133_1217319_+	hypothetical protein	A0A2H4J7N1	uncultured_Caudovirales_phage	3.0e-25	93.4
AYY62100.1\|1217315_1217735_+	hypothetical protein	A0A2H4J466	uncultured_Caudovirales_phage	1.2e-69	94.2
AYY62101.1\|1217735_1218080_+	nuclease	H9A0T3	Staphylococcus_phage	8.2e-61	96.5
AYY63325.1\|1218217_1218580_+	hypothetical protein	A1BUA8	Staphylococcus_virus	3.4e-41	81.6
AYY62102.1\|1218569_1218797_+	hypothetical protein	A0A2H4J4C3	uncultured_Caudovirales_phage	1.5e-31	98.6
AYY62103.1\|1218945_1219371_+	dUTP diphosphatase	A0A141VTT2	Staphylococcus_phage	5.5e-67	92.9
AYY62104.1\|1219419_1219593_+	hypothetical protein	A0A2H4JDM8	uncultured_Caudovirales_phage	3.6e-17	76.8
AYY62105.1\|1219593_1220010_+	hypothetical protein	H9A0M4	Staphylococcus_phage	8.7e-41	60.5
AYY62106.1\|1220085_1220307_+	hypothetical protein	A0A2H4J460	uncultured_Caudovirales_phage	1.3e-27	84.7
AYY62107.1\|1220325_1220742_+	transcriptional regulator	A0A1W6JNN5	Staphylococcus_phage	1.4e-67	88.4
AYY62108.1\|1220962_1221409_+\|terminase	terminase small subunit	A0A1J0MFQ9	Staphylococcus_phage	1.1e-65	89.7
AYY62109.1\|1221395_1222676_+\|terminase	PBSX family phage terminase large subunit	I1W649	Staphylococcus_phage	1.5e-211	83.3
AYY62110.1\|1222687_1224217_+\|portal	phage portal protein	A0A1W6JNP8	Staphylococcus_phage	3.4e-239	80.8
AYY62111.1\|1224223_1225162_+\|head	phage head morphogenesis protein	A0A1W6JNS6	Staphylococcus_phage	1.4e-139	78.4
AYY62112.1\|1225175_1225721_+	hypothetical protein	NA	NA	NA	NA
AYY62113.1\|1226110_1226716_+	DUF4355 domain-containing protein	A0A1W6JNT6	Staphylococcus_phage	6.3e-24	65.5
AYY62114.1\|1226732_1227662_+\|capsid	phage major capsid protein	A0A1W6JNP7	Staphylococcus_phage	9.1e-155	88.0
AYY62115.1\|1227682_1227952_+	hypothetical protein	H9A0V2	Staphylococcus_phage	2.3e-26	68.5
AYY62116.1\|1227953_1228283_+\|head,tail	phage head-tail adapter protein	A0A1W6JNR3	Staphylococcus_phage	1.5e-43	81.7
AYY62117.1\|1228279_1228582_+	hypothetical protein	A0A1W6JNQ9	Staphylococcus_phage	2.4e-40	79.0
AYY62118.1\|1228581_1228944_+	HK97 gp10 family phage protein	A0A1W6JNQ6	Staphylococcus_phage	1.3e-45	77.4
AYY62119.1\|1228943_1229333_+	hypothetical protein	A0A1W6JNQ3	Staphylococcus_phage	3.6e-49	73.6
AYY62120.1\|1229374_1229929_+\|tail	phage major tail protein, TP901-1 family	A0A1W6JNU0	Staphylococcus_phage	2.4e-86	89.7
AYY62121.1\|1229993_1230353_+\|tail	phage tail protein	A0A1W6JNQ1	Staphylococcus_phage	5.8e-33	58.0
AYY62122.1\|1230394_1230739_+	hypothetical protein	A0A1W6JNR9	Staphylococcus_phage	5.7e-46	80.7
AYY62123.1\|1230753_1234683_+\|tail	phage tail protein	H9A0P1	Staphylococcus_phage	9.5e-20	46.4
AYY62124.1\|1234694_1235651_+\|tail	phage tail family protein	A0A1W6JNU3	Staphylococcus_phage	6.9e-134	71.5
AYY62125.1\|1235662_1237123_+	hypothetical protein	A0A1W6JNY1	Staphylococcus_phage	1.2e-153	70.0
AYY62126.1\|1237125_1239009_+	DUF2817 domain-containing protein	H9A0P4	Staphylococcus_phage	8.9e-250	66.3
AYY62127.1\|1239024_1240212_+	DUF2479 domain-containing protein	H9A0P5	Staphylococcus_phage	1.1e-109	54.4
AYY62128.1\|1240225_1240648_+	hypothetical protein	A0A1W6JNR2	Staphylococcus_phage	1.7e-47	62.6
AYY62129.1\|1240628_1241027_+	hypothetical protein	A0A1W6JQP0	Staphylococcus_phage	3.9e-22	44.2
AYY63326.1\|1241507_1243214_+	CHAP domain-containing protein	A0A1W6JNR1	Staphylococcus_phage	9.6e-219	71.0
AYY62130.1\|1243268_1244333_+	DUF2479 domain-containing protein	A0A1W6JNS7	Staphylococcus_phage	4.2e-63	69.5
AYY62131.1\|1244350_1244683_+	hypothetical protein	H9A0P9	Staphylococcus_phage	5.3e-33	81.2
AYY62132.1\|1244675_1244822_+	XkdX family protein	H9A137	Staphylococcus_phage	2.3e-20	97.9
AYY62133.1\|1244868_1246344_+	SGNH/GDSL hydrolase family protein	W0TW81	Staphylococcus_phage	2.1e-76	44.4
AYY62134.1\|1246399_1246669_+\|holin	phage holin	A0A2H4JHI3	uncultured_Caudovirales_phage	6.0e-43	94.4
AYY62135.1\|1246668_1248072_+	CHAP domain-containing protein	A0A2H4J4H5	uncultured_Caudovirales_phage	2.1e-272	97.0
AYY62136.1\|1248224_1248365_-	FAD-binding protein	NA	NA	NA	NA
AYY62137.1\|1248369_1248792_-	transcriptional regulator	NA	NA	NA	NA
AYY62138.1\|1248948_1249887_+	aldo/keto reductase	NA	NA	NA	NA
AYY62139.1\|1250347_1253029_+	MMPL family transporter	NA	NA	NA	NA
AYY62140.1\|1253052_1253997_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AYY62141.1\|1254346_1254916_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AYY62142.1\|1255025_1256165_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	6.3e-73	99.3
AYY62143.1\|1256400_1257075_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.2e-125	97.3
AYY62144.1\|1257523_1258000_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYY62145.1\|1258091_1259390_+	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	5.5e-25	30.9
AYY62146.1\|1259446_1259953_+	hypothetical protein	NA	NA	NA	NA
AYY62147.1\|1260039_1261227_-	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
AYY62148.1\|1261223_1262000_-	nickel pincer cofactor biosynthesis protein LarB	NA	NA	NA	NA
AYY62149.1\|1262014_1262851_-	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
AYY62150.1\|1262861_1264130_-	nickel-dependent lactate racemase	NA	NA	NA	NA
AYY62151.1\|1264418_1265441_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	1.6e-35	28.6
AYY62152.1\|1265523_1265916_+	hypothetical protein	NA	NA	NA	NA
AYY62153.1\|1266028_1266139_+	hypothetical protein	NA	NA	NA	NA
AYY62154.1\|1266393_1266822_+	DUF1934 family protein	NA	NA	NA	NA
AYY62155.1\|1266818_1268480_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

1402364 : 1412788

uncultured_Caudovirales_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY62273.1\|1402364_1403870_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	3.4e-58	32.6
AYY62274.1\|1404151_1404652_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
AYY62275.1\|1404665_1405541_-	DMT family transporter	NA	NA	NA	NA
AYY62276.1\|1406294_1406693_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
AYY62277.1\|1406655_1408761_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	99.4
AYY62278.1\|1408879_1409848_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.9e-185	100.0
AYY62279.1\|1410094_1411069_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.3e-164	99.1
AYY62280.1\|1411052_1412012_+	iron ABC transporter permease	A0A2H4J116	uncultured_Caudovirales_phage	3.8e-15	92.0
AYY62281.1\|1412008_1412788_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6

DBSCAN-SWA_3

1435767 : 1485921

Staphylococcus_phage(37.5%)

terminase,protease,integrase,transposase

attL 1436957:1436972|attR 1478237:1478252

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY62303.1\|1435767_1436940_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
AYY62304.1\|1436931_1437183_+	hypothetical protein	NA	NA	NA	NA
1436957:1436972	attL	NA	NA	NA	NA
AYY62305.1\|1437248_1437359_-	hypothetical protein	NA	NA	NA	NA
AYY62306.1\|1437340_1439326_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
AYY62307.1\|1439333_1442168_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	58.1
AYY62308.1\|1442520_1443453_+	HPr kinase/phosphorylase	NA	NA	NA	NA
AYY62309.1\|1443458_1444298_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
AYY62310.1\|1444294_1444831_+	acyltransferase	NA	NA	NA	NA
AYY62311.1\|1444797_1446237_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AYY62312.1\|1446301_1447234_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.9e-83	48.9
AYY62313.1\|1447409_1448318_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	8.1e-07	32.8
AYY62314.1\|1448317_1449313_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	7.7e-51	39.8
AYY62315.1\|1449442_1450387_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.4e-54	40.6
AYY62316.1\|1450714_1451299_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.1e-52	54.7
AYY62317.1\|1451451_1451643_-	hypothetical protein	NA	NA	NA	NA
AYY62318.1\|1451673_1452573_-	TIGR01777 family protein	NA	NA	NA	NA
AYY62319.1\|1453408_1454068_+	DUF4887 domain-containing protein	NA	NA	NA	NA
AYY62320.1\|1454240_1454477_-	hypothetical protein	NA	NA	NA	NA
AYY62321.1\|1454829_1455843_+	hypothetical protein	NA	NA	NA	NA
AYY62322.1\|1455895_1456906_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AYY62323.1\|1457100_1458291_+	phosphoglycerate kinase	NA	NA	NA	NA
AYY62324.1\|1458421_1459183_+	triose-phosphate isomerase	NA	NA	NA	NA
AYY62325.1\|1459185_1460703_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
AYY62326.1\|1460841_1462146_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	2.8e-194	80.0
AYY62327.1\|1462311_1462770_+	hypothetical protein	NA	NA	NA	NA
AYY62328.1\|1462838_1463072_+	protein-export membrane protein SecG	NA	NA	NA	NA
AYY62329.1\|1463371_1464112_+	alpha/beta fold hydrolase	NA	NA	NA	NA
AYY62330.1\|1464146_1466525_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.1e-90	38.6
AYY62331.1\|1466549_1467020_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.4e-71	88.5
AYY63333.1\|1467599_1468706_-\|integrase	site-specific integrase	H0UST3	Bacillus_phage	1.2e-76	43.6
AYY62332.1\|1468720_1469458_-	XRE family transcriptional regulator	A0A1W6JQE6	Staphylococcus_phage	1.1e-06	28.8
AYY62333.1\|1469611_1469830_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYY62334.1\|1470005_1470215_+	pathogenicity island protein	Q4ZE76	Staphylococcus_phage	1.2e-17	68.3
AYY62335.1\|1470219_1470561_+	hypothetical protein	NA	NA	NA	NA
AYY62336.1\|1470645_1471515_+	mobile element-associated protein	A0A2H4JEH3	uncultured_Caudovirales_phage	3.6e-145	82.7
AYY62337.1\|1471526_1472897_+	DNA primase	A0A2H4JBE3	uncultured_Caudovirales_phage	2.8e-253	93.6
AYY62338.1\|1473145_1473499_+	pathogenicity island protein	A0A2H4JBD4	uncultured_Caudovirales_phage	7.9e-43	67.3
AYY62339.1\|1473491_1473848_+	hypothetical protein	NA	NA	NA	NA
AYY62340.1\|1473848_1474490_+	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	6.4e-91	76.1
AYY62341.1\|1474828_1475167_+	pathogenicity island protein	Q4ZE66	Staphylococcus_phage	9.6e-38	72.5
AYY62342.1\|1475179_1475713_+	hypothetical protein	A0A2H4JD56	uncultured_Caudovirales_phage	2.2e-12	31.9
AYY62343.1\|1475732_1476419_+	hypothetical protein	Q4ZE82	Staphylococcus_phage	1.1e-27	31.8
AYY62344.1\|1476478_1476964_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	4.2e-55	65.0
AYY62345.1\|1477112_1477586_+	hypothetical protein	NA	NA	NA	NA
AYY62346.1\|1477587_1478298_+	hypothetical protein	NA	NA	NA	NA
1478237:1478252	attR	NA	NA	NA	NA
AYY62347.1\|1478290_1479331_+	hypothetical protein	NA	NA	NA	NA
AYY62348.1\|1479507_1479762_+	DUF3102 domain-containing protein	A0A2H4JAH5	uncultured_Caudovirales_phage	3.3e-27	69.2
AYY62349.1\|1481405_1481864_+	transcriptional regulator	NA	NA	NA	NA
AYY62350.1\|1482030_1482855_+	hypothetical protein	NA	NA	NA	NA
AYY62351.1\|1483367_1484546_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	3.3e-61	37.2
AYY62352.1\|1485312_1485714_+	DUF1433 domain-containing protein	NA	NA	NA	NA
AYY62353.1\|1485759_1485921_+\|terminase	terminase	Q4ZE85	Staphylococcus_phage	2.8e-19	83.0

DBSCAN-SWA_4

1696201 : 1704671

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY62552.1\|1696201_1696684_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	7.5e-20	42.0
AYY62553.1\|1696670_1697798_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AYY62554.1\|1697798_1698503_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	4.7e-47	42.5
AYY62555.1\|1698502_1698763_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
AYY62556.1\|1698764_1699436_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
AYY62557.1\|1699428_1701618_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.6e-138	40.3
AYY62558.1\|1701596_1703081_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.2e-44	31.7
AYY62559.1\|1703073_1704105_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	9.6e-65	43.4
AYY62560.1\|1704104_1704671_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.0e-28	38.9

DBSCAN-SWA_5

2299281 : 2308436

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY63083.1\|2299281_2299800_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.1e-28	46.5
AYY63084.1\|2299818_2302092_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.0e-66	30.3
AYY63085.1\|2302327_2304619_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	4.8e-32	38.2
AYY63086.1\|2304968_2305229_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-06	44.3
AYY63087.1\|2305244_2306384_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.7e-83	44.4
AYY63088.1\|2306404_2307469_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AYY63089.1\|2307431_2308436_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	2.2e-05	29.1

DBSCAN-SWA_6

2421885 : 2464881

Staphylococcus_phage(92.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY63188.1\|2421885_2432964_-	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	1.5e-41	27.9
AYY63189.1\|2433368_2433680_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.1e-35	71.8
AYY63190.1\|2433705_2436123_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.4
AYY63191.1\|2436411_2437626_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	4.6e-183	83.7
AYY63192.1\|2437732_2438686_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-67	84.7
AYY63193.1\|2438682_2439246_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	5.1e-68	65.9
AYY63194.1\|2439512_2439914_-	transcriptional regulator	NA	NA	NA	NA
AYY63195.1\|2440404_2441232_-	alpha/beta hydrolase	NA	NA	NA	NA
AYY63196.1\|2441474_2442476_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.2e-131	70.3
AYY63197.1\|2442521_2442983_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.5e-59	84.2
AYY63198.1\|2442995_2444177_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.3e-178	75.6
AYY63199.1\|2444189_2444822_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-87	76.7
AYY63200.1\|2444828_2445872_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	7.6e-134	66.5
AYY63201.1\|2446309_2447803_-	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
AYY63202.1\|2448142_2448994_-	autolysin	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
AYY63203.1\|2449372_2449588_-	hypothetical protein	NA	NA	NA	NA
AYY63204.1\|2449794_2450274_+	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	2.9e-24	43.3
AYY63205.1\|2450279_2450723_+	competence protein ComK	NA	NA	NA	NA
AYY63206.1\|2450709_2451153_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	1.3e-21	43.5
AYY63207.1\|2451292_2452006_-	transaldolase	M4QQQ7	Cyanophage	9.1e-22	37.7
AYY63208.1\|2452282_2452591_+	hypothetical protein	NA	NA	NA	NA
AYY63209.1\|2452627_2452993_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	2.4e-34	57.9
AYY63210.1\|2452989_2453343_+	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	2.9e-05	32.5
AYY63211.1\|2453591_2454428_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.5e-119	72.2
AYY63212.1\|2454608_2455517_-	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.8e-102	80.6
AYY63213.1\|2455619_2456819_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.8e-193	86.1
AYY63214.1\|2457188_2458781_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	4.2e-269	83.8
AYY63215.1\|2459007_2459796_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.3e-98	70.4
AYY63216.1\|2459782_2460259_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	1.5e-44	58.7
AYY63217.1\|2460317_2460569_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.9e-35	81.9
AYY63218.1\|2460565_2461567_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	1.3e-90	49.2
AYY63219.1\|2461556_2462981_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	5.4e-175	64.1
AYY63352.1\|2463968_2464121_+	hypothetical protein	NA	NA	NA	NA
AYY63220.1\|2464215_2464881_+	hypothetical protein	A0A2H4J5B8	uncultured_Caudovirales_phage	5.5e-05	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033781

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3764 : 12082

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYY60995.1\|3764_4706_-	cation transporter	A0A1V0SED0	Indivirus	6.6e-20	27.0
AYY60996.1\|5068_5554_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AYY60997.1\|5898_6573_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.7e-126	97.3
AYY61017.1\|6664_7057_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
AYY60998.1\|7057_8497_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
AYY60999.1\|9860_10301_+	type III toxin-antitoxin system ToxN/AbiQ family toxin	NA	NA	NA	NA
AYY61000.1\|10590_11199_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	1.3e-16	30.1
AYY61001.1\|11407_12082_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.0e-123	96.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033782

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033781

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection