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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032567 Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence 0 crisprs NA 0 0 0 0
CP032566 Yersinia pseudotuberculosis strain IP2666pIB1 chromosome, complete genome 5 crisprs cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,DEDDh,DinG,csa3 0 27 8 0

Results visualization

1. CP032566
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032566_1 1557340-1557451 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032566_2 1750673-1753404 TypeI-F I-F
45 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032566_3 2681886-2683654 Orphan I-F
29 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032566_4 3279523-3279606 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032566_5 4448379-4448490 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP028488 Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence 94279-94314 4 0.889
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP054046 Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence 5758-5793 6 0.833
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP032488 Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete sequence 55932-55967 6 0.833
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP032236 Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence 10438-10473 6 0.833
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP025802 Yersinia ruckeri strain SC09 plasmid pLT, complete sequence 50213-50248 6 0.833
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_CP054047 Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence 45314-45349 6 0.833
CP032566_4 4.1|3279547|36|CP032566|CRISPRCasFinder 3279547-3279582 36 NZ_LN681230 Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence 40349-40384 6 0.833
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 MK415399 CrAssphage apr34_000142F, complete genome 69234-69265 7 0.781
CP032566_2 2.29|1752385|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752385-1752416 32 MG592478 Vibrio phage 1.106.O._10N.286.51.F7, partial genome 29994-30025 7 0.781
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 NC_031245 Bacillus phage SP-15, complete genome 73321-73352 7 0.781
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 NC_002669 Lactococcus prophage bIL310, complete genome 6684-6715 7 0.781
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 AF323671 Bacteriophage bIL310, complete genome 6684-6715 7 0.781
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 667960-667991 7 0.781
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 HQ634191 Cyanophage Syn10 genomic sequence 75660-75691 7 0.781
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 DQ149023 Synechococcus cyanophage syn9, complete genome 74358-74389 7 0.781
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NC_008296 Synechococcus phage syn9, complete genome 74358-74389 7 0.781
CP032566_3 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683234-2683265 32 MN694297 Marine virus AFVG_250M922, complete genome 29848-29879 7 0.781
CP032566_3 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683234-2683265 32 MT658805 Gordonia phage Rabbitrun, complete genome 39190-39221 7 0.781
CP032566_2 2.11|1751302|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751302-1751333 32 LC554890 Ralstonia phage RP13 DNA, nearly complete genome 136984-137015 8 0.75
CP032566_2 2.11|1751302|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751302-1751333 32 NZ_CP028874 Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence 50195-50226 8 0.75
CP032566_2 2.14|1751483|33|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751483-1751515 33 NZ_CP021116 Rhodobacteraceae bacterium strain G7 plasmid unnamed2, complete sequence 91032-91064 8 0.758
CP032566_2 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751904-1751935 32 NZ_CP031358 Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence 322747-322778 8 0.75
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 NZ_CP040048 Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence 191773-191804 8 0.75
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 CAJCJZ010000002 Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence 56473-56504 8 0.75
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 MT119360 Enterococcus phage nattely, complete genome 27611-27642 8 0.75
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 NZ_CP007001 Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence 5855-5886 8 0.75
CP032566_2 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752805-1752836 32 NZ_CP046163 Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence 1182450-1182481 8 0.75
CP032566_2 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752805-1752836 32 NZ_CP046066 Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence 1365842-1365873 8 0.75
CP032566_2 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752805-1752836 32 NZ_CP045356 Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence 394067-394098 8 0.75
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 MF422185 Bacillus phage BSP10, complete genome 22163-22194 8 0.75
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NC_030903 Bacillus phage SPG24 DNA, contig00001 sequence 22300-22331 8 0.75
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 MG000860 Bacillus phage BSP9, complete genome 22574-22605 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP017764 Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence 12517-12548 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP032868 Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence 7979-8010 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP032864 Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence 21982-22013 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP032866 Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence 6216-6247 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP021893 Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence 45668-45699 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP041370 Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence 32219-32250 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP020024 Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence 59430-59461 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP032862 Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence 41050-41081 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP018185 Bacillus subtilis strain KH2 plasmid, complete sequence 21602-21633 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NC_015148 Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335 34088-34119 8 0.75
CP032566_2 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753165-1753196 32 NZ_CP014473 Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence 34088-34119 8 0.75
CP032566_2 2.43|1753225|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753225-1753256 32 KM589504 Microviridae Fen2266_11, complete genome 3436-3467 8 0.75
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP018634 Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence 78798-78829 8 0.75
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP045959 Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence 238023-238054 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 MN871511 UNVERIFIED: Vibrio phage vspsw1, complete genome 100096-100127 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 MN871505 UNVERIFIED: Vibrio phage ValDsh2, complete genome 4854-4885 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 MT442039 Vibrio phage vB_ValS_X1, partial genome 4703-4734 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 MN871510 UNVERIFIED: Vibrio phage valsw3, complete genome 88766-88797 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 MH925094 UNVERIFIED: Vibrio phage VspSw_1, complete genome 4901-4932 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 CP024913 Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence 37927-37958 8 0.75
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 NC_019515 Bacillus phage BCD7, complete genome 66304-66335 8 0.75
CP032566_3 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682454-2682485 32 KY593455 Yersinia phage fHe-Yen9-01, complete genome 110831-110862 8 0.75
CP032566_3 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683174-2683205 32 AP014715 Edwardsiella phage PEi26 DNA, complete sequence 168474-168505 8 0.75
CP032566_3 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683174-2683205 32 NC_028683 Edwardsiella phage PEi20 DNA, complete sequence 168902-168933 8 0.75
CP032566_3 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683174-2683205 32 MN087708 Edwardsiella phage vB_EtaM-IME523, complete genome 164248-164279 8 0.75
CP032566_3 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683234-2683265 32 NZ_CP021082 Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence 180764-180795 8 0.75
CP032566_2 2.20|1751844|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751844-1751875 32 NZ_CP024658 Bacillus cereus strain MLY1 plasmid pMLY1.3, complete sequence 90031-90062 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945697 UNVERIFIED: Microviridae sp. isolate 1609-1801, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945692 UNVERIFIED: Microviridae sp. isolate 1534-1801, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945734 UNVERIFIED: Microviridae sp. isolate 2370-1801, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945482 UNVERIFIED: Microviridae sp. isolate 838-1801, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945384 UNVERIFIED: Microviridae sp. isolate 3176-1801, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG883720 Microviridae sp. isolate Pig101, complete genome 162-193 9 0.719
CP032566_2 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752445-1752476 32 MG945698 UNVERIFIED: Microviridae sp. isolate 1684-1801, complete genome 162-193 9 0.719
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 NZ_CP011408 Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence 12171-12202 9 0.719
CP032566_2 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1752565-1752596 32 MH412654 Synechococcus phage S-T4, complete genome 71905-71936 9 0.719
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NC_011248 Borrelia duttonii Ly plasmid pl35, complete sequence 2151-2182 9 0.719
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NC_014824 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence 226585-226616 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP030220 Salmonella enterica strain SA20021456 plasmid pSA20021456.1, complete sequence 55282-55313 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP022660 Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence 208377-208408 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP045061 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence 207530-207561 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP045054 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence 207546-207577 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP045058 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence 207543-207574 9 0.719
CP032566_3 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT 2681914-2681945 32 NZ_CP027765 Escherichia coli strain 2015C-3125 plasmid unnamed2, complete sequence 38564-38595 9 0.719
CP032566_3 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682334-2682365 32 MK448839 Streptococcus phage Javan102, complete genome 4669-4700 9 0.719
CP032566_3 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682334-2682365 32 MK448667 Streptococcus phage Javan105, complete genome 4669-4700 9 0.719
CP032566_3 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682334-2682365 32 MK448843 Streptococcus phage Javan112, complete genome 4668-4699 9 0.719
CP032566_3 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682334-2682365 32 MK448841 Streptococcus phage Javan108, complete genome 4669-4700 9 0.719
CP032566_3 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682394-2682425 32 CP015514 Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence 129965-129996 9 0.719
CP032566_3 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682454-2682485 32 MN693429 Marine virus AFVG_25M409, complete genome 4973-5004 9 0.719
CP032566_3 3.11|2682514|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682514-2682545 32 NZ_MH909329 Leclercia adecarboxylata strain 150707804 plasmid p707804-3FII, complete sequence 99984-100015 9 0.719
CP032566_3 3.13|2682634|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682634-2682665 32 NC_015383 Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence 234929-234960 9 0.719
CP032566_3 3.13|2682634|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682634-2682665 32 NC_015383 Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence 344383-344414 9 0.719
CP032566_3 3.16|2682814|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682814-2682845 32 LR135896 uncultured phage genomic DNA containing rbcL region region 85234-85265 9 0.719
CP032566_3 3.16|2682814|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682814-2682845 32 MN693157 Marine virus AFVG_25M322, complete genome 1595-1626 9 0.719
CP032566_3 3.18|2682934|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682934-2682965 32 MH766655 Curvibacter phage TJ1, complete genome 26581-26612 9 0.719
CP032566_3 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683234-2683265 32 NZ_CP007797 Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence 60681-60712 9 0.719
CP032566_3 3.26|2683415|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683415-2683446 32 NC_014031 Bacillus megaterium QM B1551 plasmid pBM600, complete sequence 17611-17642 9 0.719
CP032566_3 3.28|2683535|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683535-2683566 32 NC_010371 Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence 19107-19138 9 0.719
CP032566_3 3.28|2683535|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683535-2683566 32 MK867354 Synechococcus phage S-SCSM1, complete genome 24374-24405 9 0.719
CP032566_2 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1753045-1753076 32 NZ_KX785326 Streptococcus suis strain 3366 plasmid unnamed1, complete sequence 1924-1955 10 0.688
CP032566_3 3.3|2682034|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682034-2682065 32 NZ_CP015439 Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence 188549-188580 10 0.688
CP032566_3 3.5|2682154|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682154-2682185 32 MK448796 Streptococcus phage Javan53, complete genome 25339-25370 10 0.688
CP032566_3 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2682454-2682485 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 567124-567155 10 0.688
CP032566_3 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR 2683174-2683205 32 NZ_CP018077 Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence 113544-113575 10 0.688
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013499 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S39-C84 12975-13006 11 0.656
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013497 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S35-C79 14066-14097 11 0.656
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013498 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S38-C76 14748-14779 11 0.656
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013776 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C68A-MedDCM-OCT-S36-C73, *** SEQUENCING IN PROGRESS *** 27989-28020 11 0.656
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013496 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S28-C61 1667-1698 11 0.656
CP032566_2 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1750701-1750732 32 AP013775 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C68A-MedDCM-OCT-S26-C73, *** SEQUENCING IN PROGRESS *** 18690-18721 11 0.656
CP032566_2 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751904-1751935 32 MG873442 Salmonella phage SE131, complete genome 52763-52794 11 0.656
CP032566_2 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT 1751904-1751935 32 NC_015938 Salmonella phage 7-11, complete genome 38146-38177 11 0.656

1. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP028488 (Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.889

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
gcattgccgttgaagagatccgtcattggcttggcc	Protospacer
************************.*******  .*

2. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
gcattgccgttgaagagatccgccattggctgggcc	Protospacer
**********************.*.******   .*

3. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP032488 (Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
gcattgccgttgaagagatccgccattggctgggcc	Protospacer
**********************.*.******   .*

4. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP032236 (Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
ggatcgccgttgaagagatccgtcattggcttggcc	Protospacer
* **.*******************.*******  .*

5. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP025802 (Yersinia ruckeri strain SC09 plasmid pLT, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
ggatcgccgttgaagagatccgtcattggcttggcc	Protospacer
* **.*******************.*******  .*

6. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
gtattgctgttgaagagatccgtcattggcttggcc	Protospacer
*.*****.****************.*******  .*

7. spacer 4.1|3279547|36|CP032566|CRISPRCasFinder matches to NZ_LN681230 (Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence) position: , mismatch: 6, identity: 0.833

gcattgccgttgaagagatccgtcgttggctttttc	CRISPR spacer
ggatcgccgttgaagagatccgtcattggcttggcc	Protospacer
* **.*******************.*******  .*

8. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MK415399 (CrAssphage apr34_000142F, complete genome) position: , mismatch: 7, identity: 0.781

aattattactgttgataaacttatcgatactg	CRISPR spacer
tattaatactgttgataaagttatcaaggttg	Protospacer
 **** ************* *****.* ..**

9. spacer 2.29|1752385|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG592478 (Vibrio phage 1.106.O._10N.286.51.F7, partial genome) position: , mismatch: 7, identity: 0.781

----accgtgcaagtctggcgggttggtttcgccac	CRISPR spacer
agatactgc----gtctggcgggttggttacgccac	Protospacer
    **.*.    **************** ******

10. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_031245 (Bacillus phage SP-15, complete genome) position: , mismatch: 7, identity: 0.781

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
atggtgtcatcttcaataataaaattaataac	Protospacer
*********** ************..**  . 

11. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_002669 (Lactococcus prophage bIL310, complete genome) position: , mismatch: 7, identity: 0.781

atggtgtcatcatcaataataaaaccaaatga--	CRISPR spacer
ttgatgtcatcatcaaaaataaaa--atgtgatt	Protospacer
 **.************ *******  * .***  

12. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AF323671 (Bacteriophage bIL310, complete genome) position: , mismatch: 7, identity: 0.781

atggtgtcatcatcaataataaaaccaaatga--	CRISPR spacer
ttgatgtcatcatcaaaaataaaa--atgtgatt	Protospacer
 **.************ *******  * .***  

13. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.781

attaaagaataaattgtattctaaatagttgt--	CRISPR spacer
cttaaagaataaattatattataact--ttatta	Protospacer
 **************.**** *** *  **.*  

14. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to HQ634191 (Cyanophage Syn10 genomic sequence) position: , mismatch: 7, identity: 0.781

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
actaaagaatcaattgtattcttaacatcagt	Protospacer
*.******** *********** **.* . **

15. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to DQ149023 (Synechococcus cyanophage syn9, complete genome) position: , mismatch: 7, identity: 0.781

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
actaaagaatcaattgtattcttaacatcagt	Protospacer
*.******** *********** **.* . **

16. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_008296 (Synechococcus phage syn9, complete genome) position: , mismatch: 7, identity: 0.781

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
actaaagaatcaattgtattcttaacatcagt	Protospacer
*.******** *********** **.* . **

17. spacer 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN694297 (Marine virus AFVG_250M922, complete genome) position: , mismatch: 7, identity: 0.781

gtgctgtttgttgatgtcctgctcgacgaggc	CRISPR spacer
gcggttgatgttgatttcctgctcgtcgaggc	Protospacer
*.* *   ******* ********* ******

18. spacer 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MT658805 (Gordonia phage Rabbitrun, complete genome) position: , mismatch: 7, identity: 0.781

-gtgctgtttgttgatgtcctgctcgacgaggc	CRISPR spacer
caggccg-ctgttggtgtcatgctcgacgaggc	Protospacer
 . **.* .*****.**** *************

19. spacer 2.11|1751302|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to LC554890 (Ralstonia phage RP13 DNA, nearly complete genome) position: , mismatch: 8, identity: 0.75

taaaaatactgtagtaaacaatacttttagtg	CRISPR spacer
attaactactgtagtaatcaatactttatatg	Protospacer
   ** *********** *********  .**

20. spacer 2.11|1751302|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028874 (Borreliella bavariensis PBi plasmid lp25_cp32-3, complete sequence) position: , mismatch: 8, identity: 0.75

taaaaatac----tgtagtaaacaatacttttagtg	CRISPR spacer
----atttccttttgtagtaaaaaatactttgagtg	Protospacer
    * * *    ********* ******** ****

21. spacer 2.14|1751483|33|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021116 (Rhodobacteraceae bacterium strain G7 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

cagtctggcggcgcattatctggttttatgtat	CRISPR spacer
aattcttgcggcgcatgatctggttttggtgat	Protospacer
 * *** ********* **********.   **

22. spacer 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tatctcggctgtgaagaggtcgaatacaccga	CRISPR spacer
cacaaaggctgtgaagaggtcgaagacgccgc	Protospacer
.*.   ****************** **.*** 

23. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040048 (Acinetobacter baumannii strain VB1190 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
gaattctcatcatcaataaaaaaacaaaatgg	Protospacer
. . * ************* ***** *****.

24. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 8, identity: 0.75

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
aattttaaatcatcaataataacaccaaatgc	Protospacer
*   *   ************** ******** 

25. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 8, identity: 0.75

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
aattttaaatcatcaataataacaccaaatgc	Protospacer
*   *   ************** ******** 

26. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007001 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence) position: , mismatch: 8, identity: 0.75

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
ctagagccatcatctataataaatccaaatat	Protospacer
 *.* *.******* ******** ******. 

27. spacer 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 8, identity: 0.75

attataataatcgtgattgtctttaaacgcta	CRISPR spacer
atcgggataatcgttgttgtctttaaacggca	Protospacer
**.. .******** .************* .*

28. spacer 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 8, identity: 0.75

attataataatcgtgattgtctttaaacgcta	CRISPR spacer
atcgggataatcgttgttgtctttaaacggca	Protospacer
**.. .******** .************* .*

29. spacer 2.36|1752805|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 8, identity: 0.75

attataataatcgtgattgtctttaaacgcta	CRISPR spacer
atcgggataatcgttgttgtctttaaacggca	Protospacer
**.. .******** .************* .*

30. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MF422185 (Bacillus phage BSP10, complete genome) position: , mismatch: 8, identity: 0.75

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
ctgtagcaataaatcgtattctaaaaagtttt	Protospacer
 *  *. *******.********** **** *

31. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_030903 (Bacillus phage SPG24 DNA, contig00001 sequence) position: , mismatch: 8, identity: 0.75

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
ctgtagcaataaatcgtattctaaaaagtttt	Protospacer
 *  *. *******.********** **** *

32. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG000860 (Bacillus phage BSP9, complete genome) position: , mismatch: 8, identity: 0.75

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
ctgtagcaataaatcgtattctaaaaagtttt	Protospacer
 *  *. *******.********** **** *

33. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017764 (Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

34. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032868 (Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

35. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032864 (Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

36. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032866 (Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

37. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021893 (Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

38. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041370 (Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

39. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020024 (Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

40. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032862 (Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

41. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018185 (Bacillus subtilis strain KH2 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

42. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_015148 (Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

43. spacer 2.42|1753165|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014473 (Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

acgtaaacgagaatatagacaccttcctgatc	CRISPR spacer
cgatagagaagaatataaaaaccttcctgatc	Protospacer
  .**.* .********.* ************

44. spacer 2.43|1753225|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to KM589504 (Microviridae Fen2266_11, complete genome) position: , mismatch: 8, identity: 0.75

gctaatcatgctgctaatggtgccgcgcgaga	CRISPR spacer
gctaataatgctgctaatcgtgcttttcaagt	Protospacer
****** *********** ****. . *.** 

45. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP018634 (Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence) position: , mismatch: 8, identity: 0.75

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcggcatccccctggccgtccagggtgtaa	Protospacer
*  .  *.**.************** ******

46. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 8, identity: 0.75

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcagcatccccctggccgtccagggtgtaa	Protospacer
*  .  *.**.************** ******

47. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN871511 (UNVERIFIED: Vibrio phage vspsw1, complete genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
acagtatttccatttatatcgacaactgtatc	Protospacer
.. ** ******** ************ * *.

48. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN871505 (UNVERIFIED: Vibrio phage ValDsh2, complete genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
acagtatttccatttatatcgacaactgtatc	Protospacer
.. ** ******** ************ * *.

49. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MT442039 (Vibrio phage vB_ValS_X1, partial genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
acagtatttccatttatatcgacaactgtatc	Protospacer
.. ** ******** ************ * *.

50. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN871510 (UNVERIFIED: Vibrio phage valsw3, complete genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
acagtatttccatttatatcgacaactgtatc	Protospacer
.. ** ******** ************ * *.

51. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MH925094 (UNVERIFIED: Vibrio phage VspSw_1, complete genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
acagtatttccatttatatcgacaactgtatc	Protospacer
.. ** ******** ************ * *.

52. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to CP024913 (Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
cttatttttccattaatatcaacattgtttgg	Protospacer
 **.****************.*** . ***  

53. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_019515 (Bacillus phage BCD7, complete genome) position: , mismatch: 8, identity: 0.75

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
cctgcacttccttttatatcgacaacttttat	Protospacer
 .**. .**** ** *************** *

54. spacer 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to KY593455 (Yersinia phage fHe-Yen9-01, complete genome) position: , mismatch: 8, identity: 0.75

ccatctatttgataaattccagattcatttct	CRISPR spacer
ttatcgatttgataaattacagatttaaagct	Protospacer
..*** ************ ******.*   **

55. spacer 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to AP014715 (Edwardsiella phage PEi26 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

atttacgctgagattctgcggcggcgcggtaa	CRISPR spacer
gtttacgctgagattcggaggcggccttctta	Protospacer
.*************** * ****** .  * *

56. spacer 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_028683 (Edwardsiella phage PEi20 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

atttacgctgagattctgcggcggcgcggtaa	CRISPR spacer
gtttacgctgagattcggaggcggccttctta	Protospacer
.*************** * ****** .  * *

57. spacer 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN087708 (Edwardsiella phage vB_EtaM-IME523, complete genome) position: , mismatch: 8, identity: 0.75

atttacgctgagattctgcggcggcgcggtaa	CRISPR spacer
gtttacgctgagattctgtagcggccttctta	Protospacer
.*****************..***** .  * *

58. spacer 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 8, identity: 0.75

----gtgctgtttgttgatgtcctgctcgacgaggc	CRISPR spacer
cagggcgc----ggttgacggcctgctcgacgaggc	Protospacer
    *.**     *****.* ***************

59. spacer 2.20|1751844|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024658 (Bacillus cereus strain MLY1 plasmid pMLY1.3, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtagacgcttatgctcaggttctactaata	CRISPR spacer
tagttttaccttatactctggttctactaata	Protospacer
  **     *****.*** *************

60. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945697 (UNVERIFIED: Microviridae sp. isolate 1609-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aagtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

61. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945692 (UNVERIFIED: Microviridae sp. isolate 1534-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

62. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945734 (UNVERIFIED: Microviridae sp. isolate 2370-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

63. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945482 (UNVERIFIED: Microviridae sp. isolate 838-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

64. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945384 (UNVERIFIED: Microviridae sp. isolate 3176-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

65. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG883720 (Microviridae sp. isolate Pig101, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

66. spacer 2.30|1752445|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG945698 (UNVERIFIED: Microviridae sp. isolate 1684-1801, complete genome) position: , mismatch: 9, identity: 0.719

gttttaatgtgagaaatagagcgcatccacgc	CRISPR spacer
aggtaaatgtgagaaatacagcacatccgcct	Protospacer
.  * ************* ***.*****.* .

67. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
atggtgtgatcatcaataatcaaaacgtcgct	Protospacer
******* ************ *** *.     

68. spacer 2.32|1752565|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MH412654 (Synechococcus phage S-T4, complete genome) position: , mismatch: 9, identity: 0.719

atggtgtcatcatcaataataaaaccaaatga	CRISPR spacer
gtcaagttatcatcattaataaaaccaaaaac	Protospacer
.* . **.******* ************* . 

69. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_011248 (Borrelia duttonii Ly plasmid pl35, complete sequence) position: , mismatch: 9, identity: 0.719

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
aattaagaaaaaattgtattttaaataaagtg	Protospacer
* * ***** **********.******.    

70. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 9, identity: 0.719

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
aaagtataatatattgtattttaaatagtttg	Protospacer
*  . * **** ********.*********  

71. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP030220 (Salmonella enterica strain SA20021456 plasmid pSA20021456.1, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcggtatcgccctgaccgtccagcgtgtaa	Protospacer
*  .  ..** *****.***************

72. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcagtatcgccctgaccgtccagcgtgtaa	Protospacer
*  .  ..** *****.***************

73. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcagtatcgccctgaccgtccagcgtgtaa	Protospacer
*  .  ..** *****.***************

74. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcagtatcgccctgaccgtccagcgtgtaa	Protospacer
*  .  ..** *****.***************

75. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
acgcagtatcgccctgaccgtccagcgtgtaa	Protospacer
*  .  ..** *****.***************

76. spacer 3.1|2681914|32|CP032566|CRISPRCasFinder,CRT matches to NZ_CP027765 (Escherichia coli strain 2015C-3125 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

agctctcgtctccctggccgtccagcgtgtaa	CRISPR spacer
aggcggtatctccctggccatccagggtgtag	Protospacer
** .  ..***********.***** *****.

77. spacer 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK448839 (Streptococcus phage Javan102, complete genome) position: , mismatch: 9, identity: 0.719

ttggagttaataagtttgatatgtatacgatt	CRISPR spacer
aaggagttagtaagtttgatatttatcttgat	Protospacer
  *******.************ *** . . *

78. spacer 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK448667 (Streptococcus phage Javan105, complete genome) position: , mismatch: 9, identity: 0.719

ttggagttaataagtttgatatgtatacgatt	CRISPR spacer
aaggagttagtaagtttgatatttatcttgat	Protospacer
  *******.************ *** . . *

79. spacer 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK448843 (Streptococcus phage Javan112, complete genome) position: , mismatch: 9, identity: 0.719

ttggagttaataagtttgatatgtatacgatt	CRISPR spacer
aaggagttagtaagtttgatatttatcttgat	Protospacer
  *******.************ *** . . *

80. spacer 3.8|2682334|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK448841 (Streptococcus phage Javan108, complete genome) position: , mismatch: 9, identity: 0.719

ttggagttaataagtttgatatgtatacgatt	CRISPR spacer
aaggagttagtaagtttgatatttatcttgat	Protospacer
  *******.************ *** . . *

81. spacer 3.9|2682394|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttgtttttccattaatatcgacaactttttt	CRISPR spacer
aatgttttaccattaacatcgacaatgattgc	Protospacer
. ****** *******.********.  ** .

82. spacer 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN693429 (Marine virus AFVG_25M409, complete genome) position: , mismatch: 9, identity: 0.719

ccatctatttgataaattccagattcatttct	CRISPR spacer
tcatccatttgataaataccagatatagccat	Protospacer
.****.*********** ****** .* .. *

83. spacer 3.11|2682514|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH909329 (Leclercia adecarboxylata strain 150707804 plasmid p707804-3FII, complete sequence) position: , mismatch: 9, identity: 0.719

aaacatcagcggtcccgctggatgaatatggt	CRISPR spacer
tgacagcagcgatcccgctggatgaggaattt	Protospacer
 .*** *****.*************. *   *

84. spacer 3.13|2682634|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 9, identity: 0.719

tgtcatggacgcagcgaaggcggagcaagcat	CRISPR spacer
gatcatggacgcatcgaagtcggagcctacgc	Protospacer
 .*********** ***** ******  .*..

85. spacer 3.13|2682634|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 9, identity: 0.719

tgtcatggacgcagcgaaggcggagcaagcat	CRISPR spacer
gatcatggacgcatcgaagtcggagcctacgc	Protospacer
 .*********** ***** ******  .*..

86. spacer 3.16|2682814|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to LR135896 (uncultured phage genomic DNA containing rbcL region region) position: , mismatch: 9, identity: 0.719

gatatttcatttggttgtttatctagcttgtc	CRISPR spacer
attatttcatttaattgtttatctagaccata	Protospacer
. **********..************ ...* 

87. spacer 3.16|2682814|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MN693157 (Marine virus AFVG_25M322, complete genome) position: , mismatch: 9, identity: 0.719

gatatttcatttggttgtttatctagcttgtc	CRISPR spacer
gatatttcatttagttgtttctcctgtgaggt	Protospacer
************.******* **. *.  * .

88. spacer 3.18|2682934|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MH766655 (Curvibacter phage TJ1, complete genome) position: , mismatch: 9, identity: 0.719

tcttcatgatcggcagagctggtttgttcgat	CRISPR spacer
cattcatgatcggcaaggctggttttgacaag	Protospacer
. *************..********   *.* 

89. spacer 3.23|2683234|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.719

gtgctgtttgttgatgtcctgctcgacgaggc	CRISPR spacer
cagcgcgttgtggatgttctgctcgacgagca	Protospacer
  **   **** *****.************  

90. spacer 3.26|2683415|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_014031 (Bacillus megaterium QM B1551 plasmid pBM600, complete sequence) position: , mismatch: 9, identity: 0.719

accttatttaattggaatgggtggggcttcat	CRISPR spacer
gaaatttttaattggtatgggaggggcttatt	Protospacer
.   * ********* ***** *******  *

91. spacer 3.28|2683535|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 9, identity: 0.719

gagcaatttacattagagctaaaagatattgc	CRISPR spacer
atgacagaaacattagaattaaaagatattgc	Protospacer
. *  *   ********..*************

92. spacer 3.28|2683535|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK867354 (Synechococcus phage S-SCSM1, complete genome) position: , mismatch: 9, identity: 0.719

gagcaatttacattagagctaaaagatattgc	CRISPR spacer
aaaccatttacattagaggtaaaaaatacatt	Protospacer
.*.* ************* *****.***.  .

93. spacer 2.40|1753045|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX785326 (Streptococcus suis strain 3366 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

attaaagaataaattgtattctaaatagttgt	CRISPR spacer
tacaaagaataaaatttattctaaatcaacat	Protospacer
  .********** * ********** . ..*

94. spacer 3.3|2682034|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 10, identity: 0.688

gtttttaattttccgtcagtctcacctttaat	CRISPR spacer
ctaaaaaatcttccgtcagtctcaacttttga	Protospacer
 *    ***.************** **** . 

95. spacer 3.5|2682154|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 10, identity: 0.688

gttatctgtgattgatttatatgatgttaaat	CRISPR spacer
attatctttgattgatttatacgactctgcgc	Protospacer
.****** *************.**. .*. ..

96. spacer 3.10|2682454|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 10, identity: 0.688

ccatctatttgataaattccagattcatttct	CRISPR spacer
ttgagtttttgatcaattccatattcatttgc	Protospacer
...  * ****** ******* ******** .

97. spacer 3.22|2683174|32|CP032566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018077 (Sulfitobacter sp. AM1-D1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atttacgctgagattctgcggcggcgcggtaa	CRISPR spacer
tggcgagctgggattctgcggcggcgcggggg	Protospacer
   .. ****.****************** ..

98. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013499 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S39-C84) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

99. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013497 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S35-C79) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

100. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013498 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S38-C76) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

101. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013776 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C68A-MedDCM-OCT-S36-C73, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

102. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013496 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C68A-MedDCM-OCT-S28-C61) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

103. spacer 2.1|1750701|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to AP013775 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C68A-MedDCM-OCT-S26-C73, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.656

aattattactgttgataaacttatcgatactg	CRISPR spacer
ctggtctactgctgataaacttatagataaac	Protospacer
     .*****.************ ****   

104. spacer 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to MG873442 (Salmonella phage SE131, complete genome) position: , mismatch: 11, identity: 0.656

tatctcggctgtgaagaggtcgaatacaccga	CRISPR spacer
gtcaattgctttgcagaggtcgaatacaccac	Protospacer
  .  . *** ** ****************. 

105. spacer 2.21|1751904|32|CP032566|PILER-CR,CRISPRCasFinder,CRT matches to NC_015938 (Salmonella phage 7-11, complete genome) position: , mismatch: 11, identity: 0.656

tatctcggctgtgaagaggtcgaatacaccga	CRISPR spacer
gtcaattgctttgcagaggtcgaatacaccac	Protospacer
  .  . *** ** ****************. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 203201 : 255317 58 Pseudomonas_phage(33.33%) protease,plate,transposase,tail NA
DBSCAN-SWA_2 516730 : 575746 57 uncultured_Mediterranean_phage(18.18%) protease,tail NA
DBSCAN-SWA_3 968329 : 1033637 62 Cronobacter_phage(46.15%) terminase,tRNA,head,capsid,tail,protease,transposase NA
DBSCAN-SWA_4 1896046 : 1937243 34 Moraxella_phage(16.67%) protease,transposase,coat NA
DBSCAN-SWA_5 2404686 : 2512462 112 Salmonella_phage(38.0%) lysis,head,holin,plate,capsid,tail,portal,transposase,integrase attL 2478487:2478546|attR 2512615:2512737
DBSCAN-SWA_6 3022394 : 3030650 9 Shigella_phage(33.33%) plate,coat,tail NA
DBSCAN-SWA_7 3297993 : 3393758 101 Enterobacteria_phage(20.59%) tRNA,tail,plate,capsid,protease,transposase,integrase attL 3320181:3320218|attR 3370833:3370870
DBSCAN-SWA_8 3399375 : 3406839 6 Bacillus_phage(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage