CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP033916	Chryseobacterium shandongense strain G0207 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
CP033915	Chryseobacterium shandongense strain G0207 chromosome, complete genome	0 crisprs	csa3,DEDDh,cas3,WYL,PD-DExK,c2c10_CAS-V-U3	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1118372 : 1129454

Bacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZA86156.1\|1118372_1121051_+	GHKL domain-containing protein	W8CYF6	Bacillus_phage	9.0e-22	30.5
AZA86157.1\|1121119_1121479_+	response regulator	W8CYM9	Bacillus_phage	2.1e-11	31.0
AZA86158.1\|1121542_1123441_+	propionyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	6.8e-64	32.5
AZA86159.1\|1123491_1125399_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	2.9e-83	40.3
AZA86160.1\|1125580_1125946_+	hypothetical protein	NA	NA	NA	NA
AZA86161.1\|1126060_1128265_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	9.7e-14	38.4
AZA86162.1\|1128272_1129454_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.3e-70	42.7

DBSCAN-SWA_2

4202383 : 4249693

uncultured_phage(40.0%)

holin,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZA88725.1\|4202383_4202728_+\|holin	phage holin family protein	NA	NA	NA	NA
AZA88726.1\|4202921_4204916_+	S9 family peptidase	NA	NA	NA	NA
AZA88727.1\|4204999_4205488_+	DNA-deoxyinosine glycosylase	NA	NA	NA	NA
AZA88728.1\|4205460_4206216_+	hypothetical protein	NA	NA	NA	NA
AZA88729.1\|4207135_4208185_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AZA88730.1\|4208300_4209335_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AZA88731.1\|4209409_4210348_+	sterol desaturase family protein	NA	NA	NA	NA
AZA88732.1\|4210776_4211655_+	hypothetical protein	NA	NA	NA	NA
AZA88733.1\|4211842_4212820_+	polyprenyl synthetase family protein	NA	NA	NA	NA
AZA89056.1\|4212821_4213115_-	hypothetical protein	NA	NA	NA	NA
AZA88734.1\|4213251_4215684_+	transketolase	NA	NA	NA	NA
AZA88735.1\|4215696_4216626_+	Mrr restriction system protein	NA	NA	NA	NA
AZA88736.1\|4216641_4217031_-	transcriptional regulator	NA	NA	NA	NA
AZA88737.1\|4217540_4218602_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
AZA88738.1\|4218880_4220083_-	aminopeptidase	NA	NA	NA	NA
AZA88739.1\|4220150_4220348_+	hypothetical protein	NA	NA	NA	NA
AZA88740.1\|4220647_4221163_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AZA88741.1\|4221174_4222281_+	hypothetical protein	NA	NA	NA	NA
AZA88742.1\|4222406_4224359_+	VWA domain-containing protein	A0A0G2Y422	Acanthamoeba_polyphaga_mimivirus	1.4e-08	29.2
AZA88743.1\|4224474_4224978_+	transcriptional regulator	NA	NA	NA	NA
AZA88744.1\|4224981_4225674_+	hypothetical protein	NA	NA	NA	NA
AZA88745.1\|4225742_4226087_+	hypothetical protein	NA	NA	NA	NA
AZA88746.1\|4226094_4226499_+	hypothetical protein	NA	NA	NA	NA
AZA88747.1\|4226577_4226985_+	hypothetical protein	NA	NA	NA	NA
AZA88748.1\|4226977_4227463_+	cell division protein	NA	NA	NA	NA
AZA88749.1\|4227666_4228575_+	TIGR01777 family protein	NA	NA	NA	NA
AZA88750.1\|4228681_4229995_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
AZA88751.1\|4230091_4230364_+	hypothetical protein	NA	NA	NA	NA
AZA89057.1\|4230539_4231928_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AZA88752.1\|4232082_4232697_+	hypothetical protein	NA	NA	NA	NA
AZA88753.1\|4232877_4233675_+	patatin	A0A1V0SKV5	Klosneuvirus	9.6e-12	28.4
AZA88754.1\|4233700_4234138_-	hypothetical protein	NA	NA	NA	NA
AZA88755.1\|4234186_4234909_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	9.2e-38	37.8
AZA88756.1\|4234990_4235545_-	hypothetical protein	NA	NA	NA	NA
AZA89058.1\|4236179_4237643_+	OmpA family protein	NA	NA	NA	NA
AZA88757.1\|4237803_4238697_+	SDR family oxidoreductase	NA	NA	NA	NA
AZA88758.1\|4238706_4239627_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZA88759.1\|4240093_4240546_-	hypothetical protein	NA	NA	NA	NA
AZA88760.1\|4240775_4242248_-	hypothetical protein	NA	NA	NA	NA
AZA88761.1\|4242290_4242611_-	hypothetical protein	NA	NA	NA	NA
AZA88762.1\|4243158_4243746_+	DUF4255 domain-containing protein	NA	NA	NA	NA
AZA88763.1\|4243872_4245594_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
AZA88764.1\|4245678_4247397_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
AZA88765.1\|4247435_4247867_+\|tail	phage tail protein	A0A059XEM3	uncultured_phage	1.8e-25	46.7
AZA88766.1\|4247891_4249223_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
AZA88767.1\|4249261_4249693_+\|tail	phage tail protein	A0A059XEM3	uncultured_phage	1.8e-25	46.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage