CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027735	Pseudomonas chlororaphis subsp. piscium strain DTR133 chromosome, complete genome	0 crisprs	DinG,csa3,cas3,PD-DExK,DEDDh,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1311112 : 1416589

125

Pseudomonas_phage(42.11%)

tail,tRNA,plate,capsid,portal,terminase,holin,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZC55373.1\|1311112_1312465_+\|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	NA	NA	NA	NA
AZC55374.1\|1312539_1314927_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA
AZC55375.1\|1314972_1315476_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA
AZC55376.1\|1315479_1316535_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA
AZC55377.1\|1316644_1317085_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZC55378.1\|1317081_1317858_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZC55379.1\|1317860_1318991_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA
AZC55380.1\|1318987_1319635_+	Ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	4.5e-28	39.5
AZC55381.1\|1319704_1323229_+	DNA polymerase III alpha subunit	A0A0K1Y906	Streptomyces_phage	2.4e-195	37.4
AZC55382.1\|1323369_1324317_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA
AZC55383.1\|1324436_1325765_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AZC55384.1\|1325810_1325954_+	hypothetical protein	NA	NA	NA	NA
AZC55385.1\|1326039_1327671_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.9e-158	53.5
AZC55386.1\|1327676_1328522_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	E3T537	Cafeteria_roenbergensis_virus	2.7e-49	42.8
AZC55387.1\|1328679_1329969_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	9.0e-137	59.2
AZC55388.1\|1330141_1330420_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AZC55389.1\|1330416_1331124_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZC55390.1\|1331285_1332182_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA
AZC55391.1\|1332288_1333401_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	1.1e-29	27.2
AZC55392.1\|1333409_1334255_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZC55393.1\|1334307_1334781_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZC55394.1\|1334777_1335836_+\|tRNA	tRNA pseudouridine(13) synthase	NA	NA	NA	NA
AZC55395.1\|1335823_1336573_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.0e-68	52.6
AZC55396.1\|1336572_1337250_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	8.9e-43	52.0
AZC55397.1\|1337540_1338293_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	5.7e-06	33.3
AZC55398.1\|1338399_1339404_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AZC55399.1\|1339905_1340229_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZC55400.1\|1340371_1342951_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.8e-27	22.0
AZC55401.1\|1342997_1344242_-	Integrase	A0A1I9KF78	Aeromonas_phage	3.3e-67	39.9
AZC55402.1\|1344402_1345257_-	SAM-dependent methyltransferase	Q5QF26	Pseudomonas_virus	3.0e-72	50.5
AZC55403.1\|1345253_1345586_-	hypothetical protein	NA	NA	NA	NA
AZC55404.1\|1345582_1345981_-	hypothetical protein	A0A125RNP6	Pseudomonas_phage	1.5e-13	37.0
AZC55405.1\|1345977_1346232_-	hypothetical protein	A0A2H4PHJ9	Dickeya_phage	3.7e-10	50.6
AZC55406.1\|1346293_1346848_-	hypothetical protein	W6MW33	Pseudomonas_phage	1.6e-10	58.9
AZC55407.1\|1346844_1347390_-	putative hydrolase, HD superfamily	K7PKJ9	Enterobacteria_phage	6.9e-30	42.2
AZC55408.1\|1347386_1348022_-	hypothetical protein	NA	NA	NA	NA
AZC55409.1\|1348101_1348911_-	Uncharacterized protein YfdQ	A0A2R2Z323	Escherichia_phage	3.1e-50	42.9
AZC55410.1\|1348961_1349303_-	hypothetical protein	A0A2D1GMS3	Marinobacter_phage	4.8e-13	36.7
AZC55411.1\|1349354_1349594_-	transcriptional regulator PrtN, putative	A0A2H4J8B4	uncultured_Caudovirales_phage	1.8e-19	59.5
AZC55412.1\|1349590_1349974_-	hypothetical protein	A0A2H4J897	uncultured_Caudovirales_phage	5.6e-34	61.2
AZC55413.1\|1349970_1350246_-	hypothetical protein	A0A2H4JBX5	uncultured_Caudovirales_phage	2.1e-22	59.3
AZC55414.1\|1350256_1350832_-	putative deoxynucleotide monophosphate kinase	A0A2H4J8A1	uncultured_Caudovirales_phage	2.0e-67	65.9
AZC55415.1\|1350828_1351023_-	hypothetical protein	A0A2H4JG20	uncultured_Caudovirales_phage	7.4e-11	60.9
AZC55416.1\|1351172_1351838_-	HTH-type transcriptional regulator prtR	A0A2H4J8I0	uncultured_Caudovirales_phage	4.5e-31	39.6
AZC55417.1\|1352544_1353033_+	hypothetical protein	A0A2H4JFM0	uncultured_Caudovirales_phage	1.3e-48	75.4
AZC55418.1\|1353025_1353232_+	hypothetical protein	A0A2H4JDJ0	uncultured_Caudovirales_phage	2.4e-23	76.5
AZC55419.1\|1353228_1355949_+	Bifunctional DNA primase/polymerase	A0A2H4JF22	uncultured_Caudovirales_phage	0.0e+00	64.2
AZC55420.1\|1356274_1356742_+	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	4.9e-40	56.5
AZC55421.1\|1357071_1357290_+	Holin	B5TK61	Pseudomonas_phage	3.9e-24	80.8
AZC55422.1\|1357270_1357639_+\|holin	Phage holin	A0A2I6PIG1	Escherichia_phage	1.6e-25	51.4
AZC55423.1\|1357797_1358331_+\|terminase	putative phage terminase, small subunit	A0A0S2GLF2	Bacillus_phage	1.5e-08	28.7
AZC55424.1\|1358293_1360120_+\|terminase	Phage terminase, large subunit	A0A0U2C138	Paracoccus_phage	6.2e-115	39.4
AZC55425.1\|1360116_1360296_+	hypothetical protein	Q8W6U8	Burkholderia_virus	2.5e-05	63.0
AZC55426.1\|1360298_1361576_+\|portal	Phage portal protein	Q8W6U7	Burkholderia_virus	2.9e-143	58.9
AZC55427.1\|1361572_1362517_+\|capsid	phage minor capsid protein C, putative	A4JX00	Burkholderia_virus	8.8e-97	57.2
AZC55428.1\|1362580_1363906_+\|capsid	Phage major capsid protein	Q8W6U5	Burkholderia_virus	1.4e-111	51.4
AZC55429.1\|1363950_1364241_+	hypothetical protein	NA	NA	NA	NA
AZC55430.1\|1364243_1364795_+	Phage protein	Q8W6U3	Burkholderia_virus	5.2e-25	38.9
AZC55431.1\|1364797_1365160_+	hypothetical protein	Q8HAC9	Salmonella_phage	1.9e-23	48.6
AZC55432.1\|1365152_1365674_+	hypothetical protein	NA	NA	NA	NA
AZC55433.1\|1365734_1366289_+	hypothetical protein	NA	NA	NA	NA
AZC55434.1\|1366352_1366943_+	hypothetical protein	B5TK65	Pseudomonas_phage	3.1e-52	53.1
AZC55435.1\|1366939_1367146_+	Mu-like prophage FluMu protein GP38	B5TK66	Pseudomonas_phage	7.9e-19	70.6
AZC55436.1\|1367145_1368642_+\|tail	Bacteriophage tail sheath protein	B5TK67	Pseudomonas_phage	7.8e-233	81.7
AZC55437.1\|1368702_1369050_+\|tail	Phage tail tube protein	B5TK68	Pseudomonas_phage	2.8e-40	66.1
AZC55438.1\|1369046_1369343_+\|tail	Phage small tail protein E	B5TK69	Pseudomonas_phage	1.6e-41	90.8
AZC55439.1\|1369473_1371537_+\|tail	Phage tail length tape-measure protein	U5P420	Shigella_phage	2.2e-108	58.0
AZC55440.1\|1371533_1372838_+\|tail	Phage tail/DNA circulation protein	B5TK71	Pseudomonas_phage	2.1e-96	43.1
AZC55441.1\|1372840_1373956_+\|tail	Prophage tail protein	B5TK72	Pseudomonas_phage	8.7e-120	63.9
AZC55442.1\|1373952_1374459_+\|plate	Prophage baseplate assembly protein V	B5TK73	Pseudomonas_phage	1.2e-65	75.8
AZC55443.1\|1374458_1374860_+	Bacteriophage protein GP46	B5TK74	Pseudomonas_phage	7.3e-45	65.9
AZC55444.1\|1374849_1375887_+	Phage FluMu protein gp47	B5TK75	Pseudomonas_phage	3.3e-137	71.6
AZC55445.1\|1375877_1376477_+\|tail	Prophage tail protein	B5TK76	Pseudomonas_phage	4.3e-81	70.4
AZC55446.1\|1376488_1377745_+\|tail	Prophage tail fiber protein	B5TK79	Pseudomonas_phage	2.4e-17	62.7
AZC55447.1\|1377836_1378196_+	hypothetical protein	A0A291LAV4	Bordetella_phage	4.0e-18	45.1
AZC55448.1\|1378211_1378763_+	Lytic enzyme	B5TK83	Pseudomonas_phage	3.0e-81	80.2
AZC55449.1\|1378759_1379281_+	hypothetical protein	B5TK84	Pseudomonas_phage	1.7e-49	68.9
AZC55450.1\|1379321_1379816_-	putative bacteriophage protein	NA	NA	NA	NA
AZC55451.1\|1379819_1379990_-	putative bacteriophage protein	NA	NA	NA	NA
AZC55452.1\|1380702_1381428_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	1.3e-124	91.4
AZC55453.1\|1382169_1382751_+	hypothetical protein	NA	NA	NA	NA
AZC55454.1\|1382853_1383201_+	Holin	B5TK61	Pseudomonas_phage	7.7e-51	87.7
AZC55455.1\|1383367_1384132_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	2.6e-06	26.3
AZC55456.1\|1384614_1384863_+	hypothetical protein	NA	NA	NA	NA
AZC55457.1\|1384971_1385613_+	hypothetical protein	B5TK60	Pseudomonas_phage	5.2e-61	55.1
AZC55458.1\|1385854_1386379_+	hypothetical protein	NA	NA	NA	NA
AZC55459.1\|1386382_1386991_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	7.5e-49	61.0
AZC55460.1\|1387004_1387337_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	3.6e-37	69.1
AZC55461.1\|1387333_1388329_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	4.3e-110	63.8
AZC55462.1\|1388325_1389060_+\|tail	Phage tail fiber	A0A2H4JDK0	uncultured_Caudovirales_phage	5.3e-41	53.5
AZC55463.1\|1389056_1389587_+\|tail	Phage tail fiber	B0ZSG1	Halomonas_phage	2.2e-49	57.5
AZC55464.1\|1389713_1390496_+	hypothetical protein	NA	NA	NA	NA
AZC55465.1\|1390498_1390801_+	Phage protein	Q8H9M8	Vibrio_phage	1.8e-11	64.6
AZC55466.1\|1390888_1391110_+	hypothetical protein	NA	NA	NA	NA
AZC55467.1\|1391112_1392279_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	2.5e-125	57.2
AZC55468.1\|1392278_1392785_+	hypothetical protein	Q6R4W3	Vibrio_virus	2.6e-23	35.7
AZC55469.1\|1392911_1393523_+	hypothetical protein	B0ZSH0	Halomonas_phage	1.5e-25	36.4
AZC55470.1\|1393519_1393645_+	hypothetical protein	NA	NA	NA	NA
AZC55471.1\|1393651_1395859_+	Phage protein	A0A2H4JAA5	uncultured_Caudovirales_phage	7.2e-09	49.3
AZC55472.1\|1395858_1396242_+\|tail	Unclassified tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	4.0e-40	59.8
AZC55473.1\|1396234_1396447_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	6.9e-18	61.4
AZC55474.1\|1396456_1397473_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	7.7e-107	56.9
AZC55475.1\|1397615_1398200_+	hypothetical protein	B5TK65	Pseudomonas_phage	6.9e-76	72.0
AZC55476.1\|1398196_1398379_+	Mu-like prophage FluMu protein GP38	B5TK66	Pseudomonas_phage	2.5e-24	91.7
AZC55477.1\|1398378_1399875_+\|tail	Bacteriophage tail sheath protein	B5TK67	Pseudomonas_phage	4.6e-257	90.6
AZC55478.1\|1399941_1400289_+\|tail	Phage tail tube protein	B5TK68	Pseudomonas_phage	2.9e-58	93.9
AZC55479.1\|1400285_1400582_+\|tail	Phage small tail protein E	B5TK69	Pseudomonas_phage	2.3e-43	94.9
AZC55480.1\|1400712_1402911_+\|tail	Phage tail length tape-measure protein	B5TK70	Pseudomonas_phage	2.5e-33	44.9
AZC55481.1\|1402897_1404136_+\|tail	Phage tail/DNA circulation protein	B5TK71	Pseudomonas_phage	1.3e-180	75.2
AZC55482.1\|1404139_1405180_+\|tail	Prophage tail protein	B5TK72	Pseudomonas_phage	1.3e-162	82.9
AZC55483.1\|1405244_1405754_+\|plate	Prophage baseplate assembly protein V	B5TK73	Pseudomonas_phage	5.8e-79	89.3
AZC55484.1\|1405753_1406152_+	Bacteriophage protein GP46	B5TK74	Pseudomonas_phage	7.5e-66	90.2
AZC55485.1\|1406141_1407182_+	Phage FluMu protein gp47	B5TK75	Pseudomonas_phage	5.2e-167	87.3
AZC55486.1\|1407169_1407769_+\|tail	Prophage tail protein	B5TK76	Pseudomonas_phage	4.2e-105	91.5
AZC55487.1\|1407780_1408932_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	2.3e-155	71.2
AZC55488.1\|1408928_1409435_+\|tail	putative tail fiber assembly-like protein	B5TK78	Pseudomonas_phage	2.4e-45	62.6
AZC55489.1\|1409810_1411364_+\|tail	Prophage tail fiber protein	A4PE45	Ralstonia_virus	3.4e-37	53.0
AZC55490.1\|1411365_1411836_+	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	4.2e-07	34.2
AZC55491.1\|1411875_1412016_+	Lytic enzyme	B5TK83	Pseudomonas_phage	1.9e-08	67.4
AZC55492.1\|1412093_1413158_+\|tail	Prophage tail fiber protein	B5TK79	Pseudomonas_phage	1.0e-114	58.3
AZC55493.1\|1413164_1413767_+\|tail	Putative tail fiber assembly protein p37	B5TK80	Pseudomonas_phage	4.6e-43	45.3
AZC55494.1\|1413788_1414352_+	Lytic enzyme	B5TK83	Pseudomonas_phage	9.9e-88	83.3
AZC55495.1\|1414333_1414870_+	hypothetical protein	B5TK84	Pseudomonas_phage	4.0e-62	71.9
AZC55496.1\|1414952_1415453_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	4.7e-73	86.7
AZC55497.1\|1415536_1416589_+	RecA protein	A0A0S2MVG1	Bacillus_phage	4.4e-113	63.0

DBSCAN-SWA_2

2185601 : 2298435

111

uncultured_Caudovirales_phage(54.55%)

tail,tRNA,plate,portal,integrase,terminase,protease

attL 2216989:2217007|attR 2258006:2258024

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZC56218.1\|2185601_2186210_-\|protease	SOS-response repressor and protease LexA	A0A2H4JG58	uncultured_Caudovirales_phage	1.1e-12	55.4
AZC56219.1\|2186462_2187170_+	putative transcriptional regulator for fatty acid degradation FadQ, TetR family	NA	NA	NA	NA
AZC56220.1\|2187362_2188373_+	beta-N-acetylglucosaminidase	NA	NA	NA	NA
AZC56221.1\|2188384_2189128_+	S-methyl-5'-thioinosine phosphorylase	NA	NA	NA	NA
AZC56222.1\|2189233_2191927_-	DNA/RNA helicase, SNF2 family	V9XTV7	Choristoneura_murinana_nucleopolyhedrovirus	2.3e-49	29.7
AZC56223.1\|2191938_2192502_-	hypothetical protein	NA	NA	NA	NA
AZC56224.1\|2192512_2195962_-	Transcription-repair coupling factor	NA	NA	NA	NA
AZC56225.1\|2196312_2197776_+	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AZC56226.1\|2197921_2199220_-	putative MFS-type transporter	Q6JIH2	Burkholderia_virus	1.4e-68	37.9
AZC56227.1\|2199593_2200571_+	FAD:protein FMN transferase	NA	NA	NA	NA
AZC56228.1\|2200772_2202167_+	Soluble pyridine nucleotide transhydrogenase	NA	NA	NA	NA
AZC56229.1\|2202209_2202932_-	Glycerophosphoryl diester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	7.8e-05	40.4
AZC56230.1\|2202993_2203581_-	hypothetical protein	NA	NA	NA	NA
AZC56231.1\|2203675_2204926_+	Lipoprotein releasing system transmembrane protein LolC	NA	NA	NA	NA
AZC56232.1\|2204918_2205617_+	Lipoprotein-releasing system ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.3e-36	41.1
AZC56233.1\|2205681_2206926_+	Lipoprotein releasing system transmembrane protein LolE	NA	NA	NA	NA
AZC56234.1\|2206989_2208351_-	Copper sensory histidine kinase CusS	B5LWN8	Feldmannia_species_virus	7.9e-06	22.9
AZC56235.1\|2208350_2209031_-	Copper-sensing two-component system response regulator CusR	NA	NA	NA	NA
AZC56236.1\|2209186_2209741_+	Copper tolerance protein	NA	NA	NA	NA
AZC56237.1\|2209809_2210640_+	NADPH-dependent 7-cyano-7-deazaguanine reductase	A0A2I7SAX1	Vibrio_phage	1.6e-38	37.4
AZC56238.1\|2210686_2210950_-	Chromosome segregation ATPase	NA	NA	NA	NA
AZC56239.1\|2211063_2211684_-	Phosphonoacetaldehyde phosphonohydrolase-related protein	NA	NA	NA	NA
AZC56240.1\|2211886_2212570_+	Outer-membrane-phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AZC56241.1\|2212629_2212929_-	hypothetical protein	NA	NA	NA	NA
AZC56242.1\|2213207_2214389_+	Serine phosphatase RsbU, regulator of sigma subunit	NA	NA	NA	NA
AZC56243.1\|2214388_2214871_+	Serine-protein kinase RsbW	NA	NA	NA	NA
AZC56244.1\|2214946_2215873_-	Transaldolase	A0A127KNC6	Cyanophage	1.6e-13	33.5
AZC56245.1\|2216062_2217001_-\|tRNA	tRNA-dihydrouridine(20/20a) synthase	NA	NA	NA	NA
2216989:2217007	attL	NA	NA	NA	NA
AZC56246.1\|2217176_2218334_+\|integrase	integrase family protein	L7TP61	Pseudomonas_virus	1.1e-141	67.0
AZC56247.1\|2218308_2218584_-	hypothetical protein	I6NSR8	Burkholderia_phage	1.2e-25	67.1
AZC56248.1\|2218580_2218805_-	hypothetical protein	NA	NA	NA	NA
AZC56249.1\|2218801_2220151_-	hypothetical protein	W6MW33	Pseudomonas_phage	5.0e-13	66.1
AZC56250.1\|2220147_2220237_-	hypothetical protein	NA	NA	NA	NA
AZC56251.1\|2220233_2220455_-	hypothetical protein	NA	NA	NA	NA
AZC56252.1\|2220451_2220856_-	hypothetical protein	NA	NA	NA	NA
AZC56253.1\|2220905_2221223_-	transcriptional regulator, putative	NA	NA	NA	NA
AZC56254.1\|2221381_2221666_-	DNA-binding protein Roi-related protein	NA	NA	NA	NA
AZC56255.1\|2221676_2222267_-	hypothetical protein	NA	NA	NA	NA
AZC56256.1\|2222263_2222440_-	hypothetical protein	NA	NA	NA	NA
AZC56257.1\|2222608_2224120_+	hypothetical protein	NA	NA	NA	NA
AZC56258.1\|2224168_2224900_-	repressor protein c2	A5VW98	Enterobacteria_phage	8.4e-31	39.7
AZC56259.1\|2225571_2226090_+	hypothetical protein	NA	NA	NA	NA
AZC56260.1\|2226299_2228516_+	DNA primase, phage associated	A0A2D1GN57	Marinobacter_phage	7.1e-190	47.0
AZC56261.1\|2228529_2228871_+	hypothetical protein	NA	NA	NA	NA
AZC56262.1\|2229389_2229737_+	Holin	A0A2H4J893	uncultured_Caudovirales_phage	7.0e-44	81.5
AZC56263.1\|2229900_2230500_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	5.8e-62	67.9
AZC56264.1\|2230504_2232526_+\|terminase	terminase, large subunit, putative	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	82.2
AZC56265.1\|2232527_2232734_+	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	2.2e-21	72.1
AZC56266.1\|2232733_2234215_+\|portal	phage portal protein, lambda family	A0A2H4JFL5	uncultured_Caudovirales_phage	8.3e-243	84.2
AZC56267.1\|2234211_2235357_+\|protease	Prophage Clp protease-like protein	A0A2H4JDI2	uncultured_Caudovirales_phage	8.6e-139	70.0
AZC56268.1\|2235353_2235698_+	hypothetical protein	A0A2H4JF15	uncultured_Caudovirales_phage	3.6e-48	87.7
AZC56269.1\|2235861_2236857_+	Phage protein	A0A2H4J890	uncultured_Caudovirales_phage	3.1e-161	83.7
AZC56270.1\|2236859_2237180_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	3.1e-38	68.6
AZC56271.1\|2237176_2237842_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	1.5e-82	69.1
AZC56272.1\|2237828_2238365_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	5.2e-54	55.7
AZC56273.1\|2238361_2238943_+\|plate	Baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.8e-55	70.5
AZC56274.1\|2238999_2239239_+	hypothetical protein	NA	NA	NA	NA
AZC56275.1\|2239243_2239570_+\|plate	Phage baseplate assembly protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.4
AZC56276.1\|2239566_2240451_+\|plate	Baseplate assembly protein J	A0A2H4JFK9	uncultured_Caudovirales_phage	6.7e-107	68.4
AZC56277.1\|2240452_2241064_+\|tail	Phage tail fiber	A0A2H4JDH5	uncultured_Caudovirales_phage	4.7e-67	69.3
AZC56278.1\|2241056_2242523_+\|tail	Phage tail fiber protein	A0A2H4JF09	uncultured_Caudovirales_phage	8.6e-59	57.4
AZC56279.1\|2242535_2242970_+\|tail	phage tail fiber assembly-like protein	NA	NA	NA	NA
AZC56280.1\|2243075_2244236_+\|tail	Phage tail sheath monomer	A0A2H4J869	uncultured_Caudovirales_phage	3.1e-168	77.4
AZC56281.1\|2244247_2244757_+\|tail	Phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	4.4e-63	68.3
AZC56282.1\|2244773_2245094_+	hypothetical protein	A0A2H4J873	uncultured_Caudovirales_phage	7.0e-22	54.6
AZC56283.1\|2245244_2247854_+	Phage protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.4e-80	34.1
AZC56284.1\|2247866_2248712_+	Phage protein U	A0A2H4J875	uncultured_Caudovirales_phage	2.1e-113	72.1
AZC56285.1\|2248686_2248893_+\|tail	Phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	3.4e-22	74.6
AZC56286.1\|2249378_2250428_+\|tail	Phage tail protein D	A0A2H4JBF6	uncultured_Caudovirales_phage	6.6e-146	76.5
AZC56287.1\|2250480_2251035_+	Lytic enzyme	B5TK83	Pseudomonas_phage	9.1e-78	77.6
AZC56288.1\|2251025_2251568_+	hypothetical protein	B5TK84	Pseudomonas_phage	1.0e-49	63.8
AZC56289.1\|2251718_2252513_+	Dam modification methylase	C7BGE1	Burkholderia_phage	5.3e-103	67.7
AZC56290.1\|2253075_2253465_-	hypothetical protein	NA	NA	NA	NA
AZC56291.1\|2253449_2254232_-	putative membrane-associated	NA	NA	NA	NA
AZC56292.1\|2254242_2254788_-	Superfamily II DNA helicase	NA	NA	NA	NA
AZC56293.1\|2254895_2255675_-	hypothetical protein	A0A1S6KZY1	Salmonella_phage	2.5e-17	37.2
AZC56294.1\|2256357_2257719_-	hypothetical protein	A0A1V0E025	Clostridioides_phage	2.5e-20	29.7
AZC56295.1\|2258306_2258945_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
2258006:2258024	attR	NA	NA	NA	NA
AZC56296.1\|2259039_2259894_+	Transcriptional regulator	NA	NA	NA	NA
AZC56297.1\|2259945_2260434_-	hypothetical protein	NA	NA	NA	NA
AZC56298.1\|2260700_2262263_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA
AZC56299.1\|2262567_2263404_+	N-hydroxyarylamine O-acetyltransferase	NA	NA	NA	NA
AZC56300.1\|2263416_2263839_-	hypothetical protein	NA	NA	NA	NA
AZC56301.1\|2263967_2264387_-	hypothetical protein	NA	NA	NA	NA
AZC56302.1\|2264623_2266162_+	Xanthine/uracil permease family protein	NA	NA	NA	NA
AZC56303.1\|2266209_2267367_-	putative MFS-type transporter	NA	NA	NA	NA
AZC56304.1\|2267385_2267724_+	hypothetical protein	NA	NA	NA	NA
AZC56305.1\|2268224_2268419_-	hypothetical protein	NA	NA	NA	NA
AZC56306.1\|2268545_2269742_-	aromatic-amino-acid aminotransferase	NA	NA	NA	NA
AZC56307.1\|2270077_2272093_+	Excinuclease ABC subunit B	NA	NA	NA	NA
AZC56308.1\|2272199_2272391_-	hypothetical protein	NA	NA	NA	NA
AZC56309.1\|2272394_2273876_+\|tRNA	Glutamyl-tRNA synthetase	NA	NA	NA	NA
AZC56310.1\|2274811_2275351_+	Transcriptional regulator, AcrR family	NA	NA	NA	NA
AZC56311.1\|2275380_2276214_+	Putative hydrolase	NA	NA	NA	NA
AZC56312.1\|2276262_2276700_+	4-hydroxybenzoyl-CoA thioesterase domain protein	NA	NA	NA	NA
AZC56313.1\|2276820_2277780_+\|tRNA	tRNA-dihydrouridine(16) synthase	NA	NA	NA	NA
AZC56314.1\|2277899_2278346_+	Small heat shock protein	A0A1D8KN82	Synechococcus_phage	2.9e-18	37.0
AZC56315.1\|2278530_2279229_+\|tRNA	putative tRNA ligase	NA	NA	NA	NA
AZC56316.1\|2279225_2281910_+	Putative molecular chaperone, DnaJ family	NA	NA	NA	NA
AZC56317.1\|2281906_2283598_-	Chaperone protein HscC	G8DDB7	Micromonas_pusilla_virus	1.5e-78	37.6
AZC56318.1\|2283706_2286985_-	Sensory box/GGDEF family protein	A0A127AWB9	Bacillus_phage	3.8e-14	31.2
AZC56319.1\|2287065_2287956_-	Cys regulon transcriptional activator CysB	NA	NA	NA	NA
AZC56320.1\|2288101_2289520_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AZC56321.1\|2289530_2290175_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZC56322.1\|2290181_2290373_-	hypothetical protein	NA	NA	NA	NA
AZC56323.1\|2290403_2291486_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AZC56324.1\|2291540_2292653_+	Aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZC56325.1\|2292818_2293829_+	Aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZC56326.1\|2294031_2296641_+	putative type IV pilus assembly FimV-related transmembrane protein	NA	NA	NA	NA
AZC56327.1\|2296719_2297022_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA
AZC56328.1\|2297580_2298435_+\|tRNA	tRNA pseudouridine(38-40) synthase	NA	NA	NA	NA

DBSCAN-SWA_3

4424767 : 4431024

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZC58156.1\|4424767_4425160_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.5e-58	83.8
AZC58157.1\|4425161_4425524_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.3e-44	74.2
AZC58158.1\|4425523_4425823_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	4.8e-33	70.7
AZC58159.1\|4425819_4426155_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	1.9e-46	82.0
AZC58160.1\|4426151_4427153_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	5.5e-166	84.8
AZC58161.1\|4427242_4428250_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZC58162.1\|4428348_4429743_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZC58163.1\|4429743_4431024_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.4e-100	54.8

DBSCAN-SWA_4

6407659 : 6452438

Pseudomonas_phage(75.0%)

tRNA,capsid,head,integrase,terminase,tail

attL 6420222:6420281|attR 6453288:6453364

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZC59919.1\|6407659_6408889_+\|tRNA	CCA tRNA nucleotidyltransferase	A0A1V0E714	Klebsiella_phage	5.0e-76	41.2
AZC59920.1\|6408971_6409490_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	NA	NA	NA	NA
AZC59921.1\|6409480_6409834_-	Dihydroneopterin aldolase	NA	NA	NA	NA
AZC59922.1\|6409908_6410478_+	Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY	NA	NA	NA	NA
AZC59923.1\|6410519_6411545_-	N(6)-L-threonylcarbamoyladenine synthase	A0A0R6PI74	Moraxella_phage	5.2e-103	55.2
AZC59924.1\|6411745_6411961_+	SSU ribosomal protein S21p	NA	NA	NA	NA
AZC59925.1\|6412430_6414395_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.3e-73	38.2
AZC59926.1\|6414462_6416310_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	6.8e-37	34.3
AZC59927.1\|6416433_6420177_+	Sensory box/GGDEF family protein	A0A127AWB9	Bacillus_phage	9.7e-14	35.9
6420222:6420281	attL	NA	NA	NA	NA
AZC59928.1\|6420375_6421935_-	hypothetical protein	NA	NA	NA	NA
AZC59929.1\|6421946_6422972_-\|integrase	Phage integrase, site-specific tyrosine recombinase	A0A0U4IBS1	Pseudomonas_phage	1.1e-129	67.6
AZC59930.1\|6422974_6423211_-	C protein	A0A0U4ISL7	Pseudomonas_phage	1.1e-19	58.2
AZC59931.1\|6423303_6423540_+	hypothetical protein	A0A0U4KLD7	Pseudomonas_phage	8.2e-20	69.4
AZC59932.1\|6423540_6426231_+	putative phage protein	A0A0U3TH43	Pseudomonas_phage	1.4e-272	51.1
AZC59933.1\|6426699_6426993_+	hypothetical protein	NA	NA	NA	NA
AZC59934.1\|6427003_6427255_+	hypothetical protein	NA	NA	NA	NA
AZC59935.1\|6427317_6427611_+	hypothetical protein	NA	NA	NA	NA
AZC59936.1\|6427603_6427843_+	Alginate biosynthesis transcriptional activator	A0A0U4B0M9	Pseudomonas_phage	3.3e-08	51.5
AZC59937.1\|6427836_6428085_+	hypothetical protein	NA	NA	NA	NA
AZC59938.1\|6428884_6429148_-	putative phage protein	A5X9H0	Aeromonas_virus	7.5e-14	52.0
AZC59939.1\|6429229_6429949_-\|capsid	Phage capsid and scaffold	A0A0U4B0L9	Pseudomonas_phage	1.1e-102	78.4
AZC59940.1\|6430007_6432059_-\|terminase	Phage terminase, ATPase subunit	A0A0U4JIZ9	Pseudomonas_phage	1.0e-259	67.2
AZC59941.1\|6432222_6433146_+\|capsid	Phage capsid scaffolding protein	A0A0U4JVV6	Pseudomonas_phage	4.4e-61	55.9
AZC59942.1\|6433147_6434167_+\|capsid	Phage capsid protein	A0A0U4K5I9	Pseudomonas_phage	7.7e-123	67.3
AZC59943.1\|6434163_6434886_+\|terminase	putative terminase, endonuclease subunit	A0A0U4JEJ1	Pseudomonas_phage	3.5e-77	66.0
AZC59944.1\|6434920_6435445_+\|head	putative head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	5.4e-40	55.6
AZC59945.1\|6435441_6435897_+	hypothetical protein	A0A0U4IBS7	Pseudomonas_phage	1.9e-41	59.6
AZC59946.1\|6435886_6436567_+	hypothetical protein	A0A0U4ISN1	Pseudomonas_phage	7.0e-64	62.8
AZC59947.1\|6436578_6437694_+	Phage protein	A0A0U4KLE6	Pseudomonas_phage	1.7e-139	66.8
AZC59948.1\|6437699_6438149_+	hypothetical protein	A0A0U3TH58	Pseudomonas_phage	3.4e-59	77.7
AZC59949.1\|6438148_6438361_+	putative Zinc-finger containing protein	A0A0U4IIN4	Pseudomonas_phage	2.1e-14	58.5
AZC59950.1\|6438456_6438711_+	hypothetical protein	A0A0H5AUD7	Pseudomonas_phage	6.5e-07	38.0
AZC59951.1\|6438707_6439241_+	putative phage lysozyme	NA	NA	NA	NA
AZC59952.1\|6439237_6439732_+	Phage outer membrane lytic protein Rz	A0A0U4JXC2	Pseudomonas_phage	1.2e-25	55.8
AZC59953.1\|6439769_6440057_+	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	2.1e-22	59.6
AZC59954.1\|6440229_6442590_+\|tail	Phage-related tail protein	A0A0U4IJ81	Pseudomonas_phage	6.1e-139	40.8
AZC59955.1\|6442589_6442907_+	hypothetical protein	A0A0U4B0N5	Pseudomonas_phage	7.6e-37	78.4
AZC59956.1\|6442903_6444076_+	Phage protein	A0A0U4JJ14	Pseudomonas_phage	5.8e-167	73.8
AZC59957.1\|6444072_6444597_+	hypothetical protein	A0A0U4JVX3	Pseudomonas_phage	2.0e-82	83.3
AZC59958.1\|6444606_6447105_+\|tail	Phage tail fiber protein	A0A0U4K5K2	Pseudomonas_phage	1.1e-143	44.3
AZC59959.1\|6447113_6447824_+\|tail	putative tail fiber assembly protein	A0A0U4JEJ6	Pseudomonas_phage	2.1e-58	47.0
AZC59960.1\|6447805_6448744_+	hypothetical protein	NA	NA	NA	NA
AZC59961.1\|6448740_6449289_+	hypothetical protein	A0A0U4J942	Pseudomonas_phage	1.8e-54	62.9
AZC59962.1\|6449285_6449990_+	hypothetical protein	A0A2I7RNK1	Vibrio_phage	2.3e-41	38.9
AZC59963.1\|6449962_6450934_+	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	7.5e-128	70.2
AZC59964.1\|6450930_6451572_-	hypothetical protein	NA	NA	NA	NA
AZC59965.1\|6451797_6451980_+	putative mRNA interferase HicA	A0A2H4JDU5	uncultured_Caudovirales_phage	1.4e-11	61.0
AZC59966.1\|6452012_6452438_+	hypothetical protein	Q7Y3V7	Yersinia_phage	4.6e-29	47.9
6453288:6453364	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage