CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027747	Pseudomonas chlororaphis subsp. aureofaciens strain 66 chromosome, complete genome	2 crisprs	DinG,csa3,cas3,PD-DExK,DEDDh,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027747_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027747_1

432688-432790

Orphan

Consensus_repeat	Method
GCGCCGGGCCCGGTGTAAAGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027747_1

>merge|CP027747|1|432688-432790|CRISPRCasFinder
GCGCCGGGCCCGGTGTAAAGAGGGGAAGCCCCGGCCTGCCTGTACCAAGGTTCCCAAAAGCGTGAGGGCCGCGCTGATCGCGCTGGGCCCGGTGTAAAGAGGG

>CP027747|1|1|432688-432790|CRISPRCasFinder
GCGCCGGGCCCGGTGTAAAGAGGG	GAAGCCCCGGCCTGCCTGTACCAAGGTTCCCAAAAGCGTGAGGGCCGCGCTGATC
GCGCTGGGCCCGGTGTAAAGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027747.1\|AZE08689.1\|427196_428483_-\|Murein-hydrolase-activator-EnvC	unknown	unknown	gnl\|CDD\|227278
CP027747.1\|AZE08701.1\|437983_438499_-\|DNA-directed-RNA-polymerase,-beta-subunit	unknown	unknown	gnl\|CDD\|379230
CP027747.1\|AZE08697.1\|434950_436036_-\|Nitrogen-regulation-protein-NtrB	unknown	unknown	gnl\|CDD\|226370
CP027747.1\|AZE08699.1\|436632_436755_+\|Acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|181242
CP027747.1\|AZE08702.1\|438587_439130_-\|Periplasmic-chorismate-mutase-I-precursor	unknown	unknown	gnl\|CDD\|236441
CP027747.1\|AZE08690.1\|428619_430149_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
CP027747.1\|AZE08694.1\|431729_432185_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223297
CP027747.1\|AZE08696.1\|433517_434954_-\|Nitrogen-regulation-protein-NtrC	unknown	unknown	gnl\|CDD\|273818
CP027747.1\|AZE08687.1\|424929_425688_-\|Putative-periplasmic-protein-YibQ	unknown	unknown	gnl\|CDD\|377404
CP027747.1\|AZE08700.1\|436896_438012_+\|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|225080
CP027747.1\|AZE08695.1\|432249_432624_+\|hypothetical-protein	unknown	unknown	unknown
CP027747.1\|AZE08688.1\|425854_427165_-\|Carboxyl-terminal-protease	unknown	unknown	gnl\|CDD\|223864
CP027747.1\|AZE08691.1\|430300_430714_+\|Rhodanese-related-sulfurtransferase-YibN	unknown	unknown	gnl\|CDD\|238089
CP027747.1\|AZE08698.1\|436394_436664_-\|putative-MFS-type-transporter	unknown	unknown	unknown
CP027747.1\|AZE08705.1\|443148_444603_+\|tRNA-4-thiouridine-synthase	unknown	unknown	gnl\|CDD\|234932
CP027747.1\|AZE08693.1\|431026_431509_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	unknown	unknown	gnl\|CDD\|180234
CP027747.1\|AZE08686.1\|424101_424857_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	unknown	unknown	gnl\|CDD\|223904
CP027747.1\|AZE08692.1\|430715_430970_+\|Glutaredoxin-3-(Grx3)	unknown	unknown	gnl\|CDD\|274017
CP027747.1\|AZE08704.1\|441411_442818_-\|Glutamine-synthetase-type-I	unknown	unknown	gnl\|CDD\|181884
CP027747.1\|AZE08703.1\|439216_441250_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405

Protein	Function_ID	Function_description	E-value
CP027747.1\|AZE08701.1\|437983_438499_-\|DNA-directed-RNA-polymerase,-beta-subunit	gnl\|CDD\|379230	pfam13511, DUF4124, Domain of unknown function (DUF4124). This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.	2.13853e-11
CP027747.1\|AZE08697.1\|434950_436036_-\|Nitrogen-regulation-protein-NtrB	gnl\|CDD\|226370	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms].	1.36849e-164
CP027747.1\|AZE08696.1\|433517_434954_-\|Nitrogen-regulation-protein-NtrC	gnl\|CDD\|273818	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I). This model represents NtrC, a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase, GlnA, and may be called GlnL, GlnG, etc. [Central intermediary metabolism, Nitrogen metabolism, Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	0
CP027747.1\|AZE08699.1\|436632_436755_+\|Acetyl-CoA-acetyltransferase	gnl\|CDD\|181242	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase.	0.000607155
CP027747.1\|AZE08702.1\|438587_439130_-\|Periplasmic-chorismate-mutase-I-precursor	gnl\|CDD\|236441	PRK09269, PRK09269, chorismate mutase; Provisional.	1.52192e-61
CP027747.1\|AZE08690.1\|428619_430149_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
CP027747.1\|AZE08694.1\|431729_432185_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	1.05147e-88
CP027747.1\|AZE08687.1\|424929_425688_-\|Putative-periplasmic-protein-YibQ	gnl\|CDD\|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	7.81793e-92
CP027747.1\|AZE08700.1\|436896_438012_+\|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	8.70993e-81
CP027747.1\|AZE08689.1\|427196_428483_-\|Murein-hydrolase-activator-EnvC	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	1.22444e-100
CP027747.1\|AZE08688.1\|425854_427165_-\|Carboxyl-terminal-protease	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.95839e-143
CP027747.1\|AZE08691.1\|430300_430714_+\|Rhodanese-related-sulfurtransferase-YibN	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	6.79697e-24
CP027747.1\|AZE08705.1\|443148_444603_+\|tRNA-4-thiouridine-synthase	gnl\|CDD\|234932	PRK01269, PRK01269, tRNA s(4)U8 sulfurtransferase; Provisional.	0
CP027747.1\|AZE08693.1\|431026_431509_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	4.26189e-83
CP027747.1\|AZE08686.1\|424101_424857_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	gnl\|CDD\|223904	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].	1.9669e-23
CP027747.1\|AZE08692.1\|430715_430970_+\|Glutaredoxin-3-(Grx3)	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	3.11994e-50
CP027747.1\|AZE08704.1\|441411_442818_-\|Glutamine-synthetase-type-I	gnl\|CDD\|181884	PRK09469, glnA, glutamate--ammonia ligase.	0
CP027747.1\|AZE08703.1\|439216_441250_-\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	1.13273e-10

>CP027747.1|AZE08695.1|432249_432624_+|hypothetical-protein
MLRVFGSLAIFGVMVGLMIGRLTTPDPTELQEVQVQPNALVVWFNNEPKVHGEHIDGAVALLFEAEGRAQKGQLKINDKDANWRVRAAEEGLLLNVVAARALHGEWSGSEVDGRWRLELQLREE
>CP027747.1|AZE08694.1|431729_432185_-|tRNA-(cytidine(34)-2'-O)-methyltransferase
MFHVILFQPEIPPNTGNVIRLCANSGCHLHLIEPLGFEMDDKRLRRAGLDYHEYATLQRHADLASCLESLGHPRLFAFTTKGSRPFHDASFAEGDAFLFGPESRGLPAEVLDALPAEQRLRLPMREGCRSLNLSNTVAVAVYEAWRQLGFK
>CP027747.1|AZE08693.1|431026_431509_+|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)
MTDQQNTAATEDESAPQFSLQRIYVRDLSFEAPKSPAIFRQQWEPSVGLDLNTRQKALEEGFHEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDDASMSHTLGAFCPNILFPYAREALDSLVTRGSFPALMLAPVNFDALYAQELQRLQAAGEGTVQ
>CP027747.1|AZE08692.1|430715_430970_+|Glutaredoxin-3-(Grx3)
MAAVVVYSSDYCPYCSRAKYLLENKGVAFEEIKVDGKPQVRAEMAQKAGRTSVPQIWIGNTHVGGCDDLFALERAGKLDALLAA
>CP027747.1|AZE08691.1|430300_430714_+|Rhodanese-related-sulfurtransferase-YibN
MVAHLIQFATEHYLLVGAFVILLALLIAHELSRGGRSLSTRELTALVNSEQGVVIDIRPSKDFAAGHIVGALNIPQDKLAARVGELEKHKAKTIILVDALGQHAGTHARELMKSGFTAAKLSGGVGSWKADNLPLVK
>CP027747.1|AZE08690.1|428619_430149_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTTTPKPLVLMILDGFGHSESHESNAIYAAKKPVLDRLYASVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAADKAVHILGLLSDGGVHSHQDHLVAMAELAFKRGAEKIYLHAFLDGRDTPPKSATSSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGNGEFNAATAQEGLQAAYERGESDEFVKATTLGEPVKVEDGDAVVFMNFRADRARELSRVFVEDDFKEFARARQPKLAGFVMLTQYAASIPAPSAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVDAIENQRYDVIVVNYANGDMVGHSGVFDAAVKAVECLDLCVGRIVEALEKVGGEALITADHGNVEQMSDAATGQAHTAHTSEPVPFIYVGKRNLKVREGGVLADVAPTMLKLLGLPQPAEMTGTSILV
>CP027747.1|AZE08689.1|427196_428483_-|Murein-hydrolase-activator-EnvC
MLRALITLALICLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKDLRGTETEMGKLEKQVDALQKELKKSESELQRLDDEKKKLQSARIEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKNFNETLRQLANVEKEISLQQAQLLVQKSSLDTQREELDKVRKERQVALAKLNDDVKARGDKLKAREQDQADLGKVLKTIEETLARQAREAEQARQKALIAQQEAEKKRLREAQASADDSPRKPPRAAPGPLVSSAGASYGGPFASSRGKLPWPVDGRLLARFGESRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQTLLKEAGDVVKAGESISTVGSSGGQGAPALYFAIRQQGRPSDPAQWCRAQG
>CP027747.1|AZE08688.1|425854_427165_-|Carboxyl-terminal-protease
MLHLSRLTSLALTIALVIGAPLAFAAETAQSTAATTTKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGIIKVVSPIDDTPASKAGIQAGDLIVKINGQPTRGQSMTEAVDKMRGKIGQKITLTLVRDGGAPFDVTLARATIQVKSVKSQLLESGYGYIRITQFQVKTGEEVSKALAKLRKDNGKKLNGIILDLRNNPGGVLQSAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKRAVLMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEAQDNEYFKEADLQGHLGNGNGGADKPTASGSKPKPMPQDDDYQLAQALSLLKGLSITRSK
>CP027747.1|AZE08687.1|424929_425688_-|Putative-periplasmic-protein-YibQ
MIGLLCLLAFTSTQAAGPAARKAYLSLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHAAEFAREAHRAGKIVILHMPMDPATGPFAWHPELPIEELERRLNAAFKAVPYTSGINNHMGSRMTSQPQAMAWLMAELQRRHKFFVDSRTSAKTVAAAEAQKIGLASVSRDVFLDDERTEAAIGHQLQTAINLARKQGSAVMIGHPYPQTLAVLERELPRLKAQGIDWIDIELMISVRSNRAMVGHGKDGVYR
>CP027747.1|AZE08686.1|424101_424857_+|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain
MFKRLLLVLASASVLFAASARAAQTPDTSLVLLTENFPPYNMARNGKNFAQGENINGIAVDIVREMFKRAGINYSLTLRFPWERIYKLALEQPGYGVFVTARLPDREPLFKWVGPIGPDDWILLARDDSKIALQSLEQARKYRIGAYKGDAIAETLAKQGLKPQVVLKDQDNARKLVGGQIDLWATGDPAGRYLARQEGVTGLKTVLRFHSAQLYLALNKEVPDETVARLQAALDQLREEGVVEEIMGRYL
>CP027747.1|AZE08696.1|433517_434954_-|Nitrogen-regulation-protein-NtrC
MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQGLEVIPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIRIHIPRLSDRREDIPTLAKHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSSLLDSAVPSFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMKVDGGDDDDSDEG
>CP027747.1|AZE08697.1|434950_436036_-|Nitrogen-regulation-protein-NtrB
MTISDQLHRLLLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQFISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPILSNGDTLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAAQLLARELPDENLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMCNVHEVLERVSSLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISSQNELRLGRICLRTRTMRQFTIGHVRHRLVTKIEIIDNGPGIPAELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSIFLPLEQGAPST
>CP027747.1|AZE08698.1|436394_436664_-|putative-MFS-type-transporter
MPISRLPSNHTAAPSLSIVGVAIASACYALVSLVCMLLLLKRIGHNAADLSTAEQADADELAREPRATPLIEDPATLPPNIDKDAQPAH
>CP027747.1|AZE08699.1|436632_436755_+|Acetyl-CoA-acetyltransferase
MWLLGSREIGMEHGVVPMARILSSASVSLCVGVAMVIERA
>CP027747.1|AZE08700.1|436896_438012_+|Methylphosphotriester-DNA--protein-cysteine-S-methyltransferase
MDNAPLLFQLPDDDTLYRALLERDPAYDGFAFVGVKSTGVFCRLTCAARKPKRENTVFFSSIKACVEAGFRACLRCRPLEQTGAQEPLVKQLLALLEHNADKRWYEGDLIELGFDPSTVRRAFKRHFGVTFLEMARLRRIGEGMQQLAGGASVIDAQISASFDSDSGFRSAFTRLLGQPPSNLRGRELLKADWLQTPIGVMLAVADAQALHLLEFFDRPALATELKRLQEHTGSTIGFGRFAPIDQIESELRRFFAGKSASFATPLALNASAFTRTVWQALRAIPPGVTRSYAEVASSIGSASAVRAVARANGANQIAIVIACHRVIGSDGSLTGYGGGLWRKRWLLEHERRLYSQIQARQHLRADEPVAG
>CP027747.1|AZE08701.1|437983_438499_-|DNA-directed-RNA-polymerase,-beta-subunit
MRVHCLYLLLLAALPAAAQIYRYTDAHGNTAYSDQPPAGVPGQAVELAPLNRIEAPRALTPPGVEPTQAPPTRAPAYTTLELSGVADGGVVRANNGTFEVEVRLQPPLLNEHRLRLLLDDQPYGQPGNLPSLQLVNIDRGEHRLAVQVLDGERVIQQSPPLTFTLQRVHRP
>CP027747.1|AZE08702.1|438587_439130_-|Periplasmic-chorismate-mutase-I-precursor
MTSRFCLALLTLLLAGNACAAPATLSPLLASIEERLAIADQVALSKWDSHKPVEDRPREREVIAGAVAQAPAYKLDGAAVEQFFAAQIEANKLVQYAHLSEWTLQGQAPDAPRPDLVGQIRPQLDRLQKRLLQQLADFSPHRNDPQCPQWLAQATHEGDRAPLRQLALIRATAELCVFKG
>CP027747.1|AZE08703.1|439216_441250_-|hypothetical-protein
MQWTRSLGLIACLAFGSTQAAPFYAGKSLAHPLITGLAESSATLAFIKQAGSVKGYYSVDPDEGQPQLLDDFGDATIESVFNIALDDESLTRLVLFKQRGQYRLHAYRYDENDRLYRRLEKLQPALERIAKDRKKLDAPTVKQALRQLTPLNYSYFYEDSGIDEFDQLDHSAGTLVGYFDANGQPITANPPGADQYRYKKTFVEKDGRFLTATYWRGEAPALEGEPLLYNYRASHIAWETEPQRFTGSEDGAYVEYSSFGGAVIAQGAYARGQRTGEWSFSNPDDGWTHGRFVDGKRQGQWTESYGWQTATGEYRDDLREGRWVLSYDEGGESAVTGFQTYVQGVLDGPSEERVDGSTESGSYRNDKREGPWVTQAGRGNFENGLKSGPWILKTDKGHNQSVNFVADKKDGELRETDANGVLVLIEHYKADVLSGTREGYSPSGNLQYSQQYENGKREGRSLGYSEDGKLISDISWHNDRYEGPHLTFLRDGTPATVGRFEGGRFVGLMKQYDQDEVLYEEANWCRFDKRGSTVERCGKQRRFTHGKLSWETDFLFGSPQGSIEYNYETGQKIREKIIGDNDQITQRTYYDNGQVECQKNSVGFTWMTINQQQVKSHESDGQLTGEQLCYHRNGGIKSRELIDNGLSACRIVYDESGKRLSSSPTDCGAPATAAAGQ
>CP027747.1|AZE08704.1|441411_442818_-|Glutamine-synthetase-type-I
MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALDDDFFEIGKMFDGSSIAGWKGIEASDMILMPVDETAVLDPFTEEPTLILVCDIIEPSTMQGYDRDPRAIAKRAEEYLKSTGIGDTVFVGPEPEFFIFDEVKFKSDISGSMFKIFSEQGSWMSDQDVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTSMCNAMEEMGLVIEVHHHEVATAGQNEIGVKFNTLVNKGDEVQTLKYCVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSISKDGKNTFAGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYKRLVPGFEAPVMLAYSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLPPEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIKVRTFVHPLEYELYYSC
>CP027747.1|AZE08705.1|443148_444603_+|tRNA-4-thiouridine-synthase
MKLIVKVFPEITIKSRPVRTRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETAVSEPKALKEMTERLSCMPGIAHFLQVDEYPLGDFDDIVAKCKQHFGEALAGKVFAVRCKRAGKHEFSSMDVEKYVGSQLRRQCGAAGISLKEPEIEVRMEIRDQRLFVIHSQHNSIGGYPLGALEQTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVLFVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHIDALVTGEAISQVSSQTLPNLSVIDCVTDKLVLRPLIASHKQDIIDLANEIGTADFAKHMPEYCGVISVNPKTHAKRHRVEHEEKEFDMAVLERAIERAKLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAQEDDPLELAGIEIKALPFYALNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRVYRPS

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Crispr_ID: CP027747_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027747_2

3153841-3153998

Orphan

Consensus_repeat	Method
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027747_2

>merge|CP027747|2|3153841-3153998|CRISPRCasFinder
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGCCTCGCTCCTACACAAGCATGTGCATTCTCTGTAGGCGCGAGGCTTGCCCACGATGGGGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGAGCAAGC

>CP027747|2|2|3153841-3153998|CRISPRCasFinder
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	CTCGCTCCTACACAAGCATGTGCATTCTCTGTAGGCGCGAGGCTTGCCCACGATGG
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGAGCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027747.1\|AZE11177.1\|3141594_3141930_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378572
CP027747.1\|AZE11192.1\|3159077_3159185_-\|hypothetical-protein	unknown	unknown	unknown
CP027747.1\|AZE11190.1\|3158314_3158770_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176854
CP027747.1\|AZE11182.1\|3150692_3151646_-\|D-3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240646
CP027747.1\|AZE11180.1\|3146824_3148621_-\|Malto-oligosyltrehalose-trehalohydrolase	unknown	unknown	gnl\|CDD\|274114
CP027747.1\|AZE11187.1\|3154992_3155376_-\|Copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
CP027747.1\|AZE11179.1\|3144734_3146828_-\|4-alpha-glucanotransferase-(amylomaltase)	unknown	unknown	gnl\|CDD\|237737
CP027747.1\|AZE11195.1\|3161005_3161923_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
CP027747.1\|AZE11176.1\|3139312_3141481_-\|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase	unknown	unknown	gnl\|CDD\|131155
CP027747.1\|AZE11189.1\|3156359_3158192_-\|Multicopper-oxidase	unknown	unknown	gnl\|CDD\|273649
CP027747.1\|AZE11194.1\|3159890_3160886_-\|Oxidoreductase,-aldo/keto-reductase-family	unknown	unknown	gnl\|CDD\|381302
CP027747.1\|AZE11178.1\|3141951_3144738_-\|Malto-oligosyltrehalose-synthase	unknown	unknown	gnl\|CDD\|237740
CP027747.1\|AZE11186.1\|3154074_3154989_-\|Copper-resistance-protein-CopD	unknown	unknown	gnl\|CDD\|224195
CP027747.1\|AZE11193.1\|3159298_3159829_+\|hypothetical-protein	unknown	unknown	unknown
CP027747.1\|AZE11191.1\|3158845_3158962_-\|hypothetical-protein	unknown	unknown	unknown
CP027747.1\|AZE11181.1\|3148635_3150204_-\|Glycogen-synthase,-ADP-glucose-transglucosylase	unknown	unknown	gnl\|CDD\|234809
CP027747.1\|AZE11184.1\|3152827_3153265_-\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|224159
CP027747.1\|AZE11188.1\|3155433_3156363_-\|Copper-resistance-protein-B	unknown	unknown	gnl\|CDD\|377498
CP027747.1\|AZE11183.1\|3151667_3152693_-\|Hydrolase,-alpha/beta-fold-family	unknown	unknown	gnl\|CDD\|223669
CP027747.1\|AZE11185.1\|3153261_3153729_-\|CopG-protein	unknown	unknown	gnl\|CDD\|225564

Protein	Function_ID	Function_description	E-value
CP027747.1\|AZE11177.1\|3141594_3141930_-\|hypothetical-protein	gnl\|CDD\|378572	pfam11154, DUF2934, Protein of unknown function (DUF2934). This bacterial family of proteins has no known function.	6.32378e-11
CP027747.1\|AZE11190.1\|3158314_3158770_-\|hypothetical-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.72284e-14
CP027747.1\|AZE11182.1\|3150692_3151646_-\|D-3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240646	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	7.23502e-177
CP027747.1\|AZE11180.1\|3146824_3148621_-\|Malto-oligosyltrehalose-trehalohydrolase	gnl\|CDD\|274114	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP027747.1\|AZE11187.1\|3154992_3155376_-\|Copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	2.84936e-24
CP027747.1\|AZE11179.1\|3144734_3146828_-\|4-alpha-glucanotransferase-(amylomaltase)	gnl\|CDD\|237737	PRK14507, PRK14507, malto-oligosyltrehalose synthase.	3.64797e-163
CP027747.1\|AZE11195.1\|3161005_3161923_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.73678e-97
CP027747.1\|AZE11176.1\|3139312_3141481_-\|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP027747.1\|AZE11189.1\|3156359_3158192_-\|Multicopper-oxidase	gnl\|CDD\|273649	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family. This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
CP027747.1\|AZE11178.1\|3141951_3144738_-\|Malto-oligosyltrehalose-synthase	gnl\|CDD\|237740	PRK14511, PRK14511, malto-oligosyltrehalose synthase.	0
CP027747.1\|AZE11186.1\|3154074_3154989_-\|Copper-resistance-protein-CopD	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	7.39954e-32
CP027747.1\|AZE11194.1\|3159890_3160886_-\|Oxidoreductase,-aldo/keto-reductase-family	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	0
CP027747.1\|AZE11181.1\|3148635_3150204_-\|Glycogen-synthase,-ADP-glucose-transglucosylase	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
CP027747.1\|AZE11184.1\|3152827_3153265_-\|putative-membrane-protein	gnl\|CDD\|224159	COG1238, COG1238, Predicted membrane protein [Function unknown].	1.86287e-36
CP027747.1\|AZE11188.1\|3155433_3156363_-\|Copper-resistance-protein-B	gnl\|CDD\|377498	pfam05275, CopB, Copper resistance protein B precursor (CopB). This family consists of several bacterial copper resistance proteins. Copper is essential and serves as cofactor for more than 30 enzymes yet a surplus of copper is toxic and leads to radical formation and oxidation of biomolecules. Therefore, copper homeostasis is a key requisite for every organism. CopB serves to extrude copper when it approaches toxic levels.	7.92865e-123
CP027747.1\|AZE11183.1\|3151667_3152693_-\|Hydrolase,-alpha/beta-fold-family	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.12934e-28
CP027747.1\|AZE11185.1\|3153261_3153729_-\|CopG-protein	gnl\|CDD\|225564	COG3019, COG3019, Predicted metal-binding protein [General function prediction only].	4.88803e-55

>CP027747.1|AZE11185.1|3153261_3153729_-|CopG-protein
MIKRLPMHNTLRLAALSALLVGSLAQAADLIPIDVHRDANCGCCKKWIEHLQANGFKVNDHVESNMSEVKQRLGVAPRLASCHTAVINGKFVEGHVPADQVLALSKRDDLLGVAAPGMPMGSPGMEMDGMPADAYQVIGLTKDGKDVVVADYPAH
>CP027747.1|AZE11184.1|3152827_3153265_-|putative-membrane-protein
MILTACLGLFLAAFGAATLLPLQSEAVLVGLLLNGQFNLWLLLAVATLGNVLGSLVNWWLGQRLERYKDRRWFPVGPRHLQTARNHYQRYGHWSLLLSWLPIIGDPLTLVAGVMGEPLKRFLLVVTLAKGARYGVLAWMTLGWVG
>CP027747.1|AZE11183.1|3151667_3152693_-|Hydrolase,-alpha/beta-fold-family
MSLSPTRCSLSRWLPGLLLTAVLPALAAEGPAYGPELQGFDYPYPLQHFAFESQGQALQMGYMDVPAKGTPNGRSVLLMHGKNFCGATWDSSIKALSDAGYRVIAADQIGFCTSSKPEHYQYSFQQLAQNTRQLLDRLGIQQVSLLGHSTGGMLATRYALQYPEQVQQLALVNPIGLEDWKALGVPYRSVDQWYARELKLSAEGIRNYERSTYYGGRWKPEFERWVDMLAGLNQGPGHTRVAWNSALIYDMIFTQPVYYEFKDLKMPTLLLIGTADTTAIGSDIAPPAVKARIGNYQVLGKQVAGLIPHSTLIEFPGLGHAPQMEEPAQFHQALLGWLASH
>CP027747.1|AZE11182.1|3150692_3151646_-|D-3-phosphoglycerate-dehydrogenase
MSVQIAVIDDWQDVARDVVDWSLLSGIGQVSFIHDYPSDTTAMSERLAPFEVICVMRERSRFDAALLRSLPRLKLLLTGGMRNAAIDLAAAASLGIQVCGTDSYKHAAPELTWALIMAQTRNLLSEASALRAGLWQQGLGGDLHGKTLGILGLGSIGQRVAQFGQVFGMRVIAWSENLTAERAAAAGVTYVNKQQLFEQADVLSLHLVLSERSRGLVDAQALAWMKPSALLVNTARGPIVDEAALISALERGRLAGAALDVFEQEPLPLDHPLRRLPNVLATPHVGYVSQQNYRQFFTQMIEDIQAWAAGQPIRQLG
>CP027747.1|AZE11181.1|3148635_3150204_-|Glycogen-synthase,-ADP-glucose-transglucosylase
MTSAVLQTQGKHPLPLAGETASTSILAPGGKTSLPLIHHNPNRKKVLFVTSEIADLVKTGGLGDVSAALPRAMAHLHDVRLLIPGYRQVMHSENPIHIIGELGGHAALPACKIGRMDMPDGLVIYVLICPELYEREGTPYGANNGRDWPDNHIRFARLGLAAADIAANLAQIHWCPDLVHAHDWPAGLAPAYMHWRGQRTPTLFTIHNLAYQGVVSLASCPELGIPEHALQQEGMEFYGKLSFLKAGMAYASHITTVSATYAQEITTPAFGCGLDGFLASKTQQGLLSGIPNGIDESWDAATDPHLSTPFAIGDWQGKAANAAHVRRMFGLDPGSGPLFAVVSRLVYQKGLDLTEGVAEYIVKSGGQIAIIGRGEPEEEQAMRALAARFPGRIGVNIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGFLFDESTVASYEEALSRAFKVFAYPQLLNAMRCRAMAAPFNWCKAVEPYAELYEQLVAKALGKSAKP
>CP027747.1|AZE11180.1|3146824_3148621_-|Malto-oligosyltrehalose-trehalohydrolase
MPSRTLETWPHGTVPLDAQRTRFALWAPDAQHVSVELEHGVSLPMLPQANGWFMVVGHCPPGTRYRFNIDNEIRVPDPASRAQDGDVHGPSLVVDPRAYRWQHPHWQGRPWHQAVIYELHVGVLGGYREVEKHLPRLAQLGITAIELMPLAEFPGDRNWGYDGVLPYAPEASYGSPDDLKHLIDCAHGLDLAVMLDVVYNHFGPDGNYLHHYAKAFFREDRHTPWGAAIDFRRQPVRDFFIDNALMWLLEYRFDGLRLDAVHAIDDPDFLSELAQRVRQRIDPARQVWLTVENEYNQASLLEQHFDAQWNDDGHNALHVLLTGETDAYYADFAKRPTEKLARCLSQGFAYQGHVTRHGTARGEPSGHLPPSAFVLFLQNHDQIGNRAFGERLVRLAEPQALRAATVLLLLSPMIPLLFMGDELAAPQPFLFFTSHHGELADAVREGRRDEFAAFSAFADPHKREQIPDPNAPDTFLASRPQADPAQGEQTLALYRQLLQLRREHIVPCLPGAEALGAEVLAEGALCARWRLGNGQELRIDLNLSPHQVEQRPPNTTQRLFDYPAQAFERLQQGYLAPYSALVSLGVAAPLPDLDGERP
>CP027747.1|AZE11179.1|3144734_3146828_-|4-alpha-glucanotransferase-(amylomaltase)
MSDAQLEILASRAGLAVDWIDANGRPQRVEPRVLRSVLASLGHPADNDQQIEASLRQLLQVQQSRQLPPLLTADAGQGLDLGHYFAPDTPCEIHLEDGSVLNLKLDANSMLPCLVPVGYQEVSIAGQHFTLAVAPERCYSVADAVDQATPRAWGLSVQLYSLRRSGDGGYGDTQALEDLVRVAGERGAEAIAISPLHAMFSSDTGRYSPYSPSSRLFLNSLYAAPGTILGERAWRSAIDASGLGSQLQQLEQQPMVDWPVAAQARQKVLRALYEGFCQGEHPLHQDFASFRHASGEALENHCRFEAIQAQRAARGESLDWREWPDAWRTPRSPALAHFAVEHASDIGFYAFCQWLIARCLERVQSTARSSGMGIGLIADLAVGADGGGSQAWSRQDELLAALTVGAPPDILNRQGQGWGISAFSPEGLVRNGFHAFIEMLRANFAHAGGLRIDHVMGLQRLWVIPLGAPPCDGAYLYYPVDDLLRLLTLESHRHQAIVLGEDLGTVPDGLREKLSARAMLGMRVLLFEQEHGTHFRPILDWPDNALATTSTHDLPTLNGWWQGRDIDWSARLGLVDESGETHWREHRQREREGLRHALSRDPQNFREAPHIATHEADQVVDASVRFLGHTRAPLVLLPLEDALGIDEQANLPGTLDSHPNWRRRLAGSSAALLDDPDAARRLELLACARLQAHERDR
>CP027747.1|AZE11178.1|3141951_3144738_-|Malto-oligosyltrehalose-synthase
MNQATTRPVRATLRLQFHRGFSLDDAVPLVPYFARLGISHLYASPLLCARAGSMHGYDVVDPTRVNPELGGEAALERLVRSLRQHDMGLLLDIVSNHMAVGGADNPWWQDLLRWGRLSPYGEFFDIQWHSPDPLMEGQLLLPFLGSDYGVALQEGTLRLCFDAERGEFHVEHYQHHFPICPSDYGELLRVPGELDAESAERLKPLADAFSTLRYQPDAHTQAEPLQRQLQDAASAPQVRAAIEQQLAQYDARQPEGFARLHALLEQQSYRLASWRTAADDINWRRFFDINELGGLRVERPAVFEATHGKIFQLIAAGLVDGLRIDHIDGLADPRGYCRKLRRRVDALRPGQHLPIYVEKILGAGETLRRDWCVDGSTGYEFMNQLSLLQHDPQGAEPLAELWSRHSERPAAFLEEARLARQQLLNGSLASDFESVAQALLQVARNDVMSRDLTLGAIRRALQELIVHFPVYRTYIGACGRSAADEAFFQQALQGARDTLGEADWPVLAYLQQWLGGRGWRQLPPGRQRKVLKHACVRFQQLTSPTAAKAVEDTALYRSAVLLSRNDVGFSTEQFCAPVEAFHAVCRERLATFPDNLLASATHDHKRGEDARARLAVLSELSPWYVAQVKHWRSLAQALRSDPQAPGAGDELILYQALLGSWPLELHSDDSQGLRDYARRLWQWQEKALREAKLHSSWAAANEAYESAVHQFIERLLLSPEGLPLRSAIGAAVQRIAPAGALNGLAQSLLRMTVPGVPDLYQGNEFWDFSLVDPDNRRPVDFATRQQALDPCGETMELLANWRDGRIKQALIAATLKRRGEYPQLFRRGTYQPLEVQGRHADKVLAFMREHQGQRAVVIVPRLVAGLLESGAHPRVDAPDWGDTRVHLPFAAPGQNLKGLFSTGAVTPHKDLMISSALRDFPVNLFIQT
>CP027747.1|AZE11177.1|3141594_3141930_-|hypothetical-protein
MSTDDKRIREFAYQIWESEGRPDGQEHRHWEMARKLAEAEALAPSKPPRATRAASAKPGKPAAKPKAVAKPAAAAPLVPPGERTPPGEKVPPGGKSSAAKKPRAPRKPAAS
>CP027747.1|AZE11176.1|3139312_3141481_-|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase
MTTSKTATTPKTSPATEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDATGEVELERIELPEYTDEIFHGYLPDAHPGLIYGYRVHGPYDPANGHRFNPNKLLIDPYAKQLVGELKWSEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGHDHRVSVPWDKTIIYETHVRGFTMRHPSVPEAVRGTFAGLMVDDVLEHIRKLGVSSVELLPIHAFVNDQHLLHKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAGLELILDVVYNHTAEGNEQGPTLSMRGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLIAEPWDIGPGGYQVGGFPPGWVEWNDKFRDTVRAFWKGDDGQLADFAARMTASGEMFNQRGRRPYTSVNFVTAHDGFTLHDLVSYNDKHNEANDEDNQDGSNHNLSWNHGVEGPTDDPQINALRLRQMRNFFATLLLAQGTPMLVAGDEFARTQHGNNNAYCQDSEIGWVNWDLDDDGKSLLKFVKRLVKLRMAYPILRRGRFLVGNYNEDIGVKDVTWLAPDASEMTTEQWQDSHGRCLGMLLDGRAQETGIRRPGADATLLLVVNAHHDIVNFCLPEVPDGGFWTCMLDTNQPSVKGQERFEFGHPYSVTGRSLLLFELQHEGED
>CP027747.1|AZE11186.1|3154074_3154989_-|Copper-resistance-protein-CopD
MGELINVALRFALYLDLMLLFGLALFGLYGLRGAQSRRRFRRPLATTLVLGALLSGAALLQLVLSMSGATRLAELDPALVPVLVLETDVGQSWLLRLAALLLAGVLLLFSSGWSRFTLYGLILCTATALASLAWGGHGAMSEGGQRYLHLGSDILHLLGAGAWLGALAAFALLLRRGACEGEQQAGHLLDALKGFASLGTLIVVSLSLSGVLNYLLIVGPDLATLSASTYGLLLSLKVAVFASMLVFAALNRFHLVPQLEQALHRASPQAALPALRRSMLLELAAALLIVGLVAMLGILSPAPE
>CP027747.1|AZE11187.1|3154992_3155376_-|Copper-resistance-protein-CopC
MSYLKHLAIAVTFGAGLTLAGVAQAHPKLLASTPAEGAKGAAPAKIELQFSEPLTTKFSGARLLMTGMPGMSHAPMPVKASVAGGSDPKSMIISPATPLPKGSYKVEWRAVSADTHPITGNLTFEVN
>CP027747.1|AZE11188.1|3155433_3156363_-|Copper-resistance-protein-B
MMPKNALTLFAALLGLSAGPLQAAESMDHSSMDHSSMPASAMPGNPMPGMDHSQMTGMDGEPLQTMEPAAPTQSRTPIPVLTDADRRAAFPPMAGHGVHDKAINSLWLVDRLEYQDADDGSALAWEMNGWIGGDIDRLWLRSEGERTNGRTENAQVEALWGHAIGPWWDVVSGVRQDFKPGAPQTWAALGLQGMALYNFESQATAYLGEGGQSALGLQAEYDILLTNRLILQPNAEVSLYGKNDPQRGIGSGLSSLEAGLRLRYELHRQFAPYVGVTWSRSYGKTADYAREEGEDSSEARLVLGVRLWF
>CP027747.1|AZE11189.1|3156359_3158192_-|Multicopper-oxidase
MHVKPTRRSFIKGLAAGGVLAGTGLWQQPLWARSEDGQLPALSGQQFDLFIGESQVNYSGTSRTAMTINGGLPGPLLRWREGDTVTIRVRNRLKEDTSIHWHGLILPANMDGVPGLSFHGIAPDGLYEYRFKVRQNGTYWYHSHSGLQEQAGVYGPLVIEAREPEPFQYDRDYVVMLSDWSDEAPERLMHILKKQPGYYNFHKRTVGDFIEDVSRDGWAATLADRKMWAQMKMTPTDLADVSGYTYTYLINGQSPGGNWTGLFKPGEKLRLRLINGSAMSYFDLRIPGLKMTVVAADGQYVQPVSVDELRIAVAETYDVLVEPGSQEAYTLFAQAMDRSGYARGTLSQRPGLSATVPPLDPRPLISMADMGMDHGSMAGMDMGAMPGMDHGQMQGMDHSQMQGMDSSNMAGMDHSGMAGMSGMDHGAMGGAMQSHPASEDGNPLVDMQTMSPTPKLADPGIGLRNNGRRVLTYADLRSTFEDPDGREPSRTIELHLTGHMEKFSWSFDGIKFSDAEPLRLTYGERVRITLVNDTMMTHPIHLHGMWSDLEDEQGRFLVRKHTIDMPPGSKRSYRVTADALGRWAYHCHLLFHMEMGMFREVRVDEAGSAA
>CP027747.1|AZE11190.1|3158314_3158770_-|hypothetical-protein
MEQRQQHLLDELIFHELYIDAPIDTVYYYVTQPDRWHEWHPASLRADTGLAGSLPAGHRFSKTIDLLGLQIHMSCRVLVAVFPKEFKIVFSSPPADGSIHYQLCKYGDGTLFKRTLHYCSDLNLVSLRPRIEHLSQLAMVNLKRNLEKIAH
>CP027747.1|AZE11191.1|3158845_3158962_-|hypothetical-protein
MQGSSTTLLRNDPTVHDALPFQREKPCIALLTSYLEIR
>CP027747.1|AZE11192.1|3159077_3159185_-|hypothetical-protein
MPVSIGAPEHLSNKYFGFLQFLYISDTNAWKPRFC
>CP027747.1|AZE11193.1|3159298_3159829_+|hypothetical-protein
MTIGYVGGWTSKAGLLVQDTGTRGKPVSQSVKVKQMLALVGQNPLALNVFKMDEMKLHKQIKGFDPENISAKQLGNMSTFLKQKGLISDVTAMTLLNAGDKFDRFGVQSDPDAKFNALEYFAIQLDNIQTNNLKGNKYASYLIPEYKKAIYVLQNLQSYGKGNGTTVTDKNHSAKA
>CP027747.1|AZE11194.1|3159890_3160886_-|Oxidoreductase,-aldo/keto-reductase-family
MQTRQLGKNGPQVSAIGLGCMGMTDFYTTGTDTREATATLHRALELGINLLDTADMYGPHSNEILIGQAIRGKRDQVFLASKFGIVRDPGDPAARGVNGRPDYIRQAIDGTLQRLGVETLDLYYQHRIDPDVAIEETVGAMAELVQAGKVRYLGLSEASAATLERAHKVHPISALQSEYSLWSRDQEDNGCLAACQRLGIAFVPYSPLGRGFLTGALKSPEDFAADDYRRFSPRFQGENFTKNLLLVEQVKQLAVAKGITTGQLALAWVLAQGDYLIPIPGTKQRKYLEENVAALQVHLSADELLALERIFSPDATAGERYPQAVMALLDR
>CP027747.1|AZE11195.1|3161005_3161923_+|LysR-family-transcriptional-regulator
MDRFNAMRVFTRIVDLGGFAKAADSLQMPRASVTVLIKQLEAHLGVQLLLRTTRQVTPTLDGAAYYQRCVRLLADLEETEAVFSVARHNPRGTLRIDMPAGIGRLVVIPALPAFSERYPLIDLEIGLNDRPVDLIREGVDCVLRGGLCLDDSLVARPLLALEQVTCASPAYLRQRGVPQSLDDLGGHQMIEYFSSVSGKRYGLEFEVQGQVLLPELPKQVSVNSADGYLAACEAGYGLVQTPYYHVAQQLAEGRLIEVLRHIPPPRMPLSALYPPHRHLSTRVRVFVDWLVELFAQPGIHNTRLA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1331008 : 1420967

Pseudomonas_phage(40.0%)

tail,plate,protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE09496.1\|1331008_1332361_+\|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	NA	NA	NA	NA
AZE09497.1\|1332435_1334823_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA
AZE09498.1\|1334868_1335372_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA
AZE09499.1\|1335375_1336431_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA
AZE09500.1\|1336540_1336981_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZE09501.1\|1336977_1337754_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZE09502.1\|1337756_1338887_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA
AZE09503.1\|1338883_1339531_+	Ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.7e-27	38.9
AZE09504.1\|1339600_1343125_+	DNA polymerase III alpha subunit	A0A2L1IZ23	Streptomyces_phage	1.4e-195	38.0
AZE09505.1\|1343265_1344213_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA
AZE09506.1\|1344332_1345661_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AZE09507.1\|1345706_1345850_+	hypothetical protein	NA	NA	NA	NA
AZE09508.1\|1345935_1347567_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.9e-158	53.5
AZE09509.1\|1347572_1348418_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	E3T537	Cafeteria_roenbergensis_virus	1.2e-49	42.8
AZE09510.1\|1348575_1349865_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	9.0e-137	59.2
AZE09511.1\|1350037_1350316_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AZE09512.1\|1350312_1351020_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZE09513.1\|1351189_1352086_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA
AZE09514.1\|1352192_1353305_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	8.3e-30	27.2
AZE09515.1\|1353393_1354239_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZE09516.1\|1354291_1354765_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZE09517.1\|1354761_1355820_+\|tRNA	tRNA pseudouridine(13) synthase	NA	NA	NA	NA
AZE09518.1\|1355807_1356557_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	52.6
AZE09519.1\|1356556_1357234_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-43	52.0
AZE09520.1\|1357524_1358277_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	5.7e-06	33.3
AZE09521.1\|1358383_1359388_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AZE09522.1\|1359888_1360212_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZE09523.1\|1360354_1362934_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.8e-27	22.0
AZE09524.1\|1363130_1363856_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	1.3e-124	91.4
AZE09525.1\|1364596_1365178_+	hypothetical protein	NA	NA	NA	NA
AZE09526.1\|1365280_1365628_+	Holin	B5TK61	Pseudomonas_phage	1.0e-50	87.7
AZE09527.1\|1365794_1366559_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	2.0e-06	26.3
AZE09528.1\|1366780_1367305_+	hypothetical protein	NA	NA	NA	NA
AZE09529.1\|1367308_1367917_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	8.2e-48	59.7
AZE09530.1\|1367930_1368263_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	2.1e-37	69.1
AZE09531.1\|1368259_1369255_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	2.8e-109	63.2
AZE09532.1\|1369251_1369986_+\|tail	Phage tail fiber	A0A2H4JDK0	uncultured_Caudovirales_phage	1.3e-39	51.4
AZE09533.1\|1369982_1370519_+\|tail	Phage tail fiber	A2I2X8	Vibrio_virus	1.0e-49	62.1
AZE09534.1\|1370622_1371375_+	hypothetical protein	NA	NA	NA	NA
AZE09535.1\|1371386_1371623_+	hypothetical protein	M4NK32	Synechococcus_phage	9.7e-05	40.0
AZE09536.1\|1371710_1371932_+	hypothetical protein	NA	NA	NA	NA
AZE09537.1\|1371934_1373101_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	1.1e-125	57.5
AZE09538.1\|1373100_1373607_+	hypothetical protein	Q6R4W3	Vibrio_virus	2.6e-23	35.7
AZE09539.1\|1373733_1374345_+	hypothetical protein	B0ZSH0	Halomonas_phage	1.5e-25	36.4
AZE09540.1\|1374341_1374467_+	hypothetical protein	NA	NA	NA	NA
AZE09541.1\|1374473_1376681_+	Phage protein	A0A2H4JAA5	uncultured_Caudovirales_phage	1.6e-08	48.0
AZE09542.1\|1376680_1377064_+\|tail	Unclassified tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	4.0e-40	59.8
AZE09543.1\|1377056_1377269_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	6.9e-18	61.4
AZE09544.1\|1377278_1378295_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	1.0e-106	56.6
AZE09545.1\|1378437_1379022_+	hypothetical protein	B5TK65	Pseudomonas_phage	3.4e-75	71.5
AZE09546.1\|1379018_1379201_+	Mu-like prophage FluMu protein GP38	B5TK66	Pseudomonas_phage	6.5e-25	93.3
AZE09547.1\|1379200_1380697_+\|tail	Bacteriophage tail sheath protein	B5TK67	Pseudomonas_phage	8.6e-256	90.6
AZE09548.1\|1380763_1381111_+\|tail	Phage tail tube protein	B5TK68	Pseudomonas_phage	2.9e-58	93.9
AZE09549.1\|1381107_1381404_+\|tail	Phage small tail protein E	B5TK69	Pseudomonas_phage	2.3e-43	94.9
AZE09550.1\|1381534_1383289_+\|tail	Phage tail length tape-measure protein	B5TK70	Pseudomonas_phage	1.5e-41	53.7
AZE09551.1\|1383275_1384514_+\|tail	Phage tail/DNA circulation protein	B5TK71	Pseudomonas_phage	5.7e-181	75.7
AZE09552.1\|1384517_1385558_+\|tail	Prophage tail protein	B5TK72	Pseudomonas_phage	3.8e-162	82.7
AZE09553.1\|1385591_1386185_+\|plate	Prophage baseplate assembly protein V	B5TK73	Pseudomonas_phage	2.0e-78	88.8
AZE09554.1\|1386184_1386583_+	Bacteriophage protein GP46	B5TK74	Pseudomonas_phage	4.8e-65	88.6
AZE09555.1\|1386572_1387613_+	Phage FluMu protein gp47	B5TK75	Pseudomonas_phage	1.4e-167	87.3
AZE09556.1\|1387600_1388200_+\|tail	Prophage tail protein	B5TK76	Pseudomonas_phage	2.5e-105	91.0
AZE09557.1\|1388211_1389069_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	1.5e-23	76.4
AZE09558.1\|1389073_1389715_+	hypothetical protein	B5TK78	Pseudomonas_phage	5.1e-40	61.9
AZE09559.1\|1389913_1390042_-	hypothetical protein	NA	NA	NA	NA
AZE09560.1\|1390098_1391652_+\|tail	Prophage tail fiber protein	A4PE45	Ralstonia_virus	1.2e-37	53.0
AZE09561.1\|1391653_1392124_+	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	5.5e-07	35.0
AZE09562.1\|1392268_1392448_-	hypothetical protein	NA	NA	NA	NA
AZE09563.1\|1392516_1393599_+\|tail	Prophage tail fiber protein	B5TK79	Pseudomonas_phage	1.4e-111	56.6
AZE09564.1\|1394062_1394209_+	hypothetical protein	NA	NA	NA	NA
AZE09565.1\|1394230_1394794_+	Lytic enzyme	B5TK83	Pseudomonas_phage	8.9e-89	84.4
AZE09566.1\|1394775_1395312_+	hypothetical protein	B5TK84	Pseudomonas_phage	3.4e-61	71.3
AZE09567.1\|1395394_1395895_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	6.1e-73	86.7
AZE09568.1\|1395978_1397031_+	RecA protein	A0A0S2MVG1	Bacillus_phage	3.3e-113	60.9
AZE09569.1\|1397039_1397507_+	Regulatory protein RecX	NA	NA	NA	NA
AZE09570.1\|1397552_1398668_-	Decarboxylase family protein	NA	NA	NA	NA
AZE09571.1\|1399151_1399346_+	hypothetical protein	NA	NA	NA	NA
AZE09572.1\|1399347_1399770_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA
AZE09573.1\|1399959_1400670_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA
AZE09574.1\|1401004_1401655_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA
AZE09575.1\|1401731_1402094_+	Diacylglycerol kinase	NA	NA	NA	NA
AZE09576.1\|1402090_1403017_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZE09577.1\|1403150_1403930_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AZE09578.1\|1404002_1404698_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA
AZE09579.1\|1404784_1405555_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA
AZE09580.1\|1405688_1406150_-	Uncharacterized protein YehS	Q9EYF4	Enterobacteria_phage	8.5e-37	51.3
AZE09581.1\|1406216_1406927_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA
AZE09582.1\|1407009_1407483_-	Acetyltransferase	NA	NA	NA	NA
AZE09583.1\|1407589_1408927_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA
AZE09584.1\|1409027_1409297_-	hypothetical protein	NA	NA	NA	NA
AZE09585.1\|1409318_1411160_+	Kup system potassium uptake protein	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	8.0e-78	35.0
AZE09586.1\|1411359_1411635_-	hypothetical protein	NA	NA	NA	NA
AZE09587.1\|1412132_1413428_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA
AZE09588.1\|1413427_1416076_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA
AZE09589.1\|1417014_1418079_+	DNA polymerase IV	NA	NA	NA	NA
AZE09590.1\|1418280_1419234_-	putative lipoprotein	NA	NA	NA	NA
AZE09591.1\|1419251_1420967_-\|tRNA	Prolyl-tRNA synthetase, bacterial type	NA	NA	NA	NA

DBSCAN-SWA_2

2051899 : 2085158

uncultured_Caudovirales_phage(70.27%)

plate,transposase,tail,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE10165.1\|2051899_2052724_-\|tail	Phage tail fiber protein	NA	NA	NA	NA
AZE10166.1\|2052723_2053299_-\|tail	Prophage tail protein	A0A2H4J9D6	uncultured_Caudovirales_phage	6.9e-28	42.2
AZE10167.1\|2053295_2054366_-	Phage FluMu protein gp47	C9DGQ6	Escherichia_phage	7.3e-23	28.8
AZE10168.1\|2054367_2054718_-	Bacteriophage protein GP46	A0A2H4JDR8	uncultured_Caudovirales_phage	1.4e-36	65.5
AZE10169.1\|2054786_2055347_-\|plate	Prophage baseplate assembly protein V	A0A2H4JFE0	uncultured_Caudovirales_phage	3.5e-61	62.4
AZE10170.1\|2055346_2056474_-\|tail	Prophage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	2.5e-159	72.5
AZE10171.1\|2056463_2057789_-\|tail	Phage tail/DNA circulation protein	A0A2H4JGT4	uncultured_Caudovirales_phage	6.0e-144	58.6
AZE10172.1\|2057785_2060014_-	hypothetical protein	A0A2H4JC53	uncultured_Caudovirales_phage	2.9e-215	56.8
AZE10173.1\|2060070_2060184_-	hypothetical protein	NA	NA	NA	NA
AZE10174.1\|2060180_2060585_-	hypothetical protein	A0A2H4JD25	uncultured_Caudovirales_phage	3.8e-33	64.7
AZE10175.1\|2060589_2060961_-	Transaldolase	A0A2H4J9F8	uncultured_Caudovirales_phage	2.1e-46	72.4
AZE10176.1\|2060974_2062072_-\|tail	Bacteriophage tail sheath protein	A0A2H4JFT7	uncultured_Caudovirales_phage	4.1e-138	73.4
AZE10177.1\|2062068_2062260_-	hypothetical protein	A0A2H4JED6	uncultured_Caudovirales_phage	2.6e-08	54.0
AZE10178.1\|2062259_2062811_-	hypothetical protein	A0A2H4JEC0	uncultured_Caudovirales_phage	1.3e-55	57.3
AZE10179.1\|2062810_2063299_-	hypothetical protein	A0A2H4JB66	uncultured_Caudovirales_phage	5.2e-53	67.5
AZE10180.1\|2063295_2063814_-	hypothetical protein	NA	NA	NA	NA
AZE10181.1\|2063823_2064717_-\|capsid	Phage major capsid protein	A0SMP3	Pseudomonas_virus	9.5e-93	57.1
AZE10182.1\|2064743_2065718_-	prophage MuSo2, protein Gp32, putative	A0A2H4J9A2	uncultured_Caudovirales_phage	3.0e-100	58.5
AZE10183.1\|2065969_2066533_-	hypothetical protein	A0A2H4J9E5	uncultured_Caudovirales_phage	4.5e-64	66.5
AZE10184.1\|2066541_2067798_-	Phage (Mu-like) virion morphogenesis protein	A0A2H4IYU7	uncultured_Caudovirales_phage	1.1e-152	62.5
AZE10185.1\|2067797_2068001_-	hypothetical protein	NA	NA	NA	NA
AZE10186.1\|2068002_2069559_-	Mu-like prophage FluMu protein gp29	A0A2H4JGA9	uncultured_Caudovirales_phage	3.9e-227	77.4
AZE10187.1\|2069558_2071121_-\|terminase	Phage terminase, large subunit	A0A2H4JF57	uncultured_Caudovirales_phage	9.6e-234	78.2
AZE10188.1\|2071117_2071432_-	hypothetical protein	NA	NA	NA	NA
AZE10189.1\|2071428_2071944_-\|terminase	Phage terminase, small subunit	A0A2H4JD50	uncultured_Caudovirales_phage	6.1e-60	73.8
AZE10190.1\|2071947_2072259_-	Phage protein	A0A2H4JGU5	uncultured_Caudovirales_phage	7.7e-42	75.5
AZE10191.1\|2072255_2072588_-	putative membrane protein	A0A2H4J7V5	uncultured_Caudovirales_phage	9.7e-27	60.6
AZE10192.1\|2072584_2072806_-	hypothetical protein	NA	NA	NA	NA
AZE10193.1\|2072792_2073407_-	putative lipoprotein	A0A2H4JEQ9	uncultured_Caudovirales_phage	9.5e-36	46.1
AZE10194.1\|2073403_2074036_-	Phage lysin	A0A2H4J7R8	uncultured_Caudovirales_phage	7.2e-87	74.8
AZE10195.1\|2074038_2074329_-	Phage protein	A0A2H4JBL7	uncultured_Caudovirales_phage	1.7e-27	68.3
AZE10196.1\|2074450_2074573_-	hypothetical protein	NA	NA	NA	NA
AZE10197.1\|2074785_2075268_-	hypothetical protein	NA	NA	NA	NA
AZE10198.1\|2075282_2075720_-	hypothetical protein	A0A2H4J0B0	uncultured_Caudovirales_phage	1.4e-36	49.3
AZE10199.1\|2076232_2076904_-	hypothetical protein	L7P7W8	Pseudomonas_phage	4.2e-69	61.3
AZE10200.1\|2076908_2077061_-	hypothetical protein	A0A1B0VN94	Pseudomonas_phage	2.4e-20	97.6
AZE10201.1\|2077198_2077411_-	hypothetical protein	NA	NA	NA	NA
AZE10202.1\|2077437_2077941_-	host nuclease inhibitor protein	A0A0U5KSG7	unidentified_phage	6.2e-17	52.4
AZE10203.1\|2077942_2078173_-	hypothetical protein	NA	NA	NA	NA
AZE10204.1\|2078174_2078798_-	Phage protein	A0A0A1IVF8	Pseudomonas_phage	4.9e-80	74.0
AZE10205.1\|2078810_2079134_-	hypothetical protein	X4YD41	Pseudomonas_phage	1.2e-16	51.8
AZE10206.1\|2079117_2079498_-	Phage protein	A0A0A1IWY8	Pseudomonas_phage	1.7e-30	58.9
AZE10207.1\|2079494_2080106_-	hypothetical protein	L7P7I3	Pseudomonas_phage	2.9e-32	41.4
AZE10208.1\|2080105_2080828_-	Phage DNA transposition protein	A0A2H4J809	uncultured_Caudovirales_phage	3.3e-96	70.8
AZE10209.1\|2080849_2082904_-\|transposase	Phage transposase	A0A2H4JEQ4	uncultured_Caudovirales_phage	1.6e-199	52.7
AZE10210.1\|2082896_2083067_-	hypothetical protein	NA	NA	NA	NA
AZE10211.1\|2083063_2083480_-	hypothetical protein	NA	NA	NA	NA
AZE10212.1\|2083476_2083914_-	Phage protein	A0A0A1IVF5	Pseudomonas_phage	7.7e-56	76.1
AZE10213.1\|2084909_2085158_+	Phage repressor	A0A1C6ZDG7	Pseudomonas_phage	7.5e-24	63.4

DBSCAN-SWA_3

3866477 : 3871096

uncultured_Caudovirales_phage(75.0%)

tail,integrase

attL 3859513:3859527|attR 3871209:3871223

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3859513:3859527	attL	NA	NA	NA	NA
AZE11834.1\|3866477_3867272_-	Dam modification methylase	C7BGE1	Burkholderia_phage	1.5e-102	66.5
AZE11835.1\|3867423_3867966_-	hypothetical protein	B5TK84	Pseudomonas_phage	6.5e-28	47.8
AZE11836.1\|3867965_3868517_-	Phage endolysin	A0A2H4JHX4	uncultured_Caudovirales_phage	2.5e-67	68.7
AZE11837.1\|3868540_3869593_-\|tail	Phage tail protein D	A0A2H4JBF6	uncultured_Caudovirales_phage	8.4e-149	75.2
AZE11838.1\|3869649_3869856_-\|tail	Phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.1e-19	67.2
AZE11839.1\|3869830_3870319_-	Phage protein U	A0A2H4J875	uncultured_Caudovirales_phage	4.9e-59	66.5
AZE11840.1\|3870399_3870777_+\|integrase	Phage-related integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	1.2e-41	70.7
AZE11841.1\|3870799_3871096_+	Integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	3.5e-20	59.4
3871209:3871223	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4310262 : 4316521

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE12218.1\|4310262_4310655_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	6.7e-59	84.6
AZE12219.1\|4310658_4311021_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.3e-44	75.0
AZE12220.1\|4311020_4311320_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.1e-32	69.7
AZE12221.1\|4311316_4311652_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	1.9e-46	82.0
AZE12222.1\|4311648_4312650_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	1.2e-165	85.1
AZE12223.1\|4312739_4313747_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZE12224.1\|4313845_4315240_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZE12225.1\|4315240_4316521_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.1e-101	55.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027747

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection