CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027728	Pseudomonas sp. R2-37-08W chromosome, complete genome	1 crisprs	DEDDh,RT,DinG,csa3,cas3	0	0	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP027728_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027728_1

4700663-4700750

Orphan

Consensus_repeat	Method
CGGGCGGGTGTGCGACGTTTCGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027728_1

>merge|CP027728|1|4700663-4700750|CRISPRCasFinder
CGGGCGGGTGTGCGACGTTTCGGGCGAGTGTGGGACGCTATCGGGCGGATGTGCGACGCTTTCGGGCGGGTGTGCGACGCTTTCGGGC

>CP027728|1|1|4700663-4700750|CRISPRCasFinder
CGGGCGGGTGTGCGACGTTTCGGGCG	AGTGTGGGACGCTATCGGGCGGATGTGCGACGCTTT
CGGGCGGGTGTGCGACGCTTTCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027728.1\|AZF12478.1\|4691015_4692635_+\|Conjugative-transfer-protein-TrbL	unknown	unknown	gnl\|CDD\|131830
CP027728.1\|AZF12479.1\|4692637_4692958_+\|hypothetical-protein	unknown	unknown	unknown
CP027728.1\|AZF12492.1\|4707799_4708348_-\|ABC-type-sugar-transport-system,-ATPase-component	unknown	unknown	unknown
CP027728.1\|AZF12494.1\|4709496_4710876_+\|Exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
CP027728.1\|AZF12484.1\|4698696_4699440_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|187620
CP027728.1\|AZF12480.1\|4693756_4694503_-\|ABC-transporter,-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226425
CP027728.1\|AZF12482.1\|4696727_4697654_-\|Transcriptional-regulator,-LysR-family	unknown	unknown	gnl\|CDD\|184959
CP027728.1\|AZF12490.1\|4704436_4706014_-\|GMP-synthase-[glutamine-hydrolyzing],-amidotransferase-subunit	unknown	unknown	gnl\|CDD\|234614
CP027728.1\|AZF12493.1\|4708605_4709373_-\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|376667
CP027728.1\|AZF12489.1\|4702918_4704178_-\|Integrase	unknown	unknown	gnl\|CDD\|271182
CP027728.1\|AZF12488.1\|4702384_4702615_-\|DNA-binding-protein,-putative	unknown	unknown	gnl\|CDD\|283558
CP027728.1\|AZF12491.1\|4706095_4707565_-\|Inosine-5'-monophosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
CP027728.1\|AZF12486.1\|4701048_4701516_-\|hypothetical-protein	unknown	unknown	unknown
CP027728.1\|AZF12495.1\|4710879_4711701_+\|Peptidase,-M23/M37-family	unknown	unknown	gnl\|CDD\|366703
CP027728.1\|AZF12483.1\|4697836_4698694_+\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|180446
CP027728.1\|AZF12477.1\|4690824_4691013_+\|hypothetical-protein	unknown	unknown	unknown
CP027728.1\|AZF12476.1\|4690195_4690822_+\|Conjugative-transfer-protein-TrbJ	unknown	unknown	gnl\|CDD\|131827
CP027728.1\|AZF12481.1\|4694827_4696420_-\|Choline-dehydrogenase	unknown	unknown	gnl\|CDD\|225186
CP027728.1\|AZF12485.1\|4699562_4700144_+\|Chromate-reductase	unknown	unknown	gnl\|CDD\|377026
CP027728.1\|AZF12487.1\|4701502_4702381_-\|Replication-protein-RepA	unknown	unknown	gnl\|CDD\|238545

Protein	Function_ID	Function_description	E-value
CP027728.1\|AZF12478.1\|4691015_4692635_+\|Conjugative-transfer-protein-TrbL	gnl\|CDD\|131830	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL. The TrbL protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbL is a homolog of the F-type TraG protein (which is believed to be a mating pair stabilization pore-forming protein, pfam07916) as well as the vir system VirB6 protein. [Cellular processes, Conjugation].	3.7294e-66
CP027728.1\|AZF12494.1\|4709496_4710876_+\|Exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	0
CP027728.1\|AZF12484.1\|4698696_4699440_+\|hypothetical-protein	gnl\|CDD\|187620	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs. 1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.79041e-67
CP027728.1\|AZF12480.1\|4693756_4694503_-\|ABC-transporter,-ATP-binding-protein	gnl\|CDD\|226425	COG3910, COG3910, Predicted ATPase [General function prediction only].	6.80402e-85
CP027728.1\|AZF12482.1\|4696727_4697654_-\|Transcriptional-regulator,-LysR-family	gnl\|CDD\|184959	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional.	9.12692e-71
CP027728.1\|AZF12490.1\|4704436_4706014_-\|GMP-synthase-[glutamine-hydrolyzing],-amidotransferase-subunit	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
CP027728.1\|AZF12493.1\|4708605_4709373_-\|putative-membrane-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	7.32184e-14
CP027728.1\|AZF12489.1\|4702918_4704178_-\|Integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.67861e-60
CP027728.1\|AZF12488.1\|4702384_4702615_-\|DNA-binding-protein,-putative	gnl\|CDD\|283558	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	4.56756e-11
CP027728.1\|AZF12491.1\|4706095_4707565_-\|Inosine-5'-monophosphate-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
CP027728.1\|AZF12495.1\|4710879_4711701_+\|Peptidase,-M23/M37-family	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.10404e-38
CP027728.1\|AZF12483.1\|4697836_4698694_+\|3-oxoacyl-ACP-reductase	gnl\|CDD\|180446	PRK06180, PRK06180, short chain dehydrogenase; Provisional.	4.68948e-84
CP027728.1\|AZF12476.1\|4690195_4690822_+\|Conjugative-transfer-protein-TrbJ	gnl\|CDD\|131827	TIGR02780, TrbJ_protein, P-type conjugative transfer protein TrbJ. The TrbJ protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbJ is a homolog of the F-type TraE protein (which is believed to be an inner membrane pore-forming protein, TIGR02761) as well as the vir system VirB5 protein.	5.44195e-41
CP027728.1\|AZF12481.1\|4694827_4696420_-\|Choline-dehydrogenase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	6.19811e-106
CP027728.1\|AZF12485.1\|4699562_4700144_+\|Chromate-reductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.21917e-41
CP027728.1\|AZF12487.1\|4701502_4702381_-\|Replication-protein-RepA	gnl\|CDD\|238545	cd01125, repA, Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.	4.08437e-70

>CP027728.1|AZF12485.1|4699562_4700144_+|Chromate-reductase
MSPKKIAVIVGSLRKESLNRLFAQEVIALAPPSLLLEIVEINELNLFNQDLEENGKSAPEAWTRFRQNMASKDGVLFFTPEYNRSVPGVLKNAIDIGSRPYGESVWAGKPAAIVSVSPGASGGFGANHHLRQSMVFLDMPLLQQPEAYIGGATRLLGPGGNLNDDGTTQFLKKFIEAFAAWVEINTAKSTGLI
>CP027728.1|AZF12484.1|4698696_4699440_+|hypothetical-protein
MRMTNKVVLITGASRGLGLSLARRFAREGASVALTYNTDAAAADRNVEALVAEGAQAMAIGGDISDPDAVKAIFAAVLARFGRIDIVVANAGRELIDTPITEIDNAMFEAVTKTNVFGTFYTLRESARHVTDGGRIIVISSTTTIVPNAGFTAYAGSKAAGRLYVECLAQEMGKRNVTVNGVVPGPLRDAGVIANLQENDYQALAQLSPFARLGSVSDVEGAVLFLASDDAAWISGHHLVVNGAAKV
>CP027728.1|AZF12483.1|4697836_4698694_+|3-oxoacyl-ACP-reductase
MKSINGKVVLVTGASSGLGRELVHQLLEKGALVAATFRKQEEVDFYNGKHAAQGMGVLVDVTDDVAVKTGVAQVLDHFGRIDIVANCAGAGTVGAVEEMTDREARRVFDLNFFGGLNIIRAVTPAMRKQRSGHIIQFSAIGGFIGYPGMGVYSAAKGATDILGEALAGELAPFNIATTVLTIGVFETQFAGRSLAYVEQKIDDYEGTPVGKFRVAIGGLQGKQPNVPGKGALAIINLMESDHPPVHAALGADAMGGMRAKMAKVEQELVQWQGNATSTERSINGI
>CP027728.1|AZF12482.1|4696727_4697654_-|Transcriptional-regulator,-LysR-family
MIGPYVNRLDLNDLFIFVNVVDRGGFTAAVASTGMPKSTLSHRMQQLEGELGVRLLSRTSRRFGMTEAGEEFYQHALAALREAEMAEMSVRQRLLEPVGTIRCTAGVATMNFAMAGMIADFLRVYPKINMVAHAADRTIDIVGENYDVAIRAHEAPLPDSDLVQRMLGVAPWFLFAGSSYLAEHGAPATPAELSSHASIFFARANAPMNWRLRHVTLSIEEIAVPIMPRLQSEDMLSLQHAAISGLGIVALPSYIARAAVARGELHRVLPEWIAGDARITALVPSRKGLLPSVRVFLDHLASEFPKIL
>CP027728.1|AZF12481.1|4694827_4696420_-|Choline-dehydrogenase
MLVAMTAGAATFASGATRSSSKTKETTRTGKQFDVVIVGGGSAGAVLAARLSADPLRSVLLLDAGPDFAPDRYPAVLTNADLVAASPEYDWHYHSDDSARIGHDIAIPRGRVIGGSSAVNAAVAMRARPADFARWAGRGIEGWAWPEVLSAYRAMENTPTGEDAWHGRTGPFPVRQRTAAQNTISMRAFVAAAESVGLPLVDDFNGARQHGVGPYPLNVINGTRINTGMAYLSADVRARANLTIRGHAEADRVLIERERAIGVLLVDGEIVPAGEVILSAGAIGSPAILLRSGIGPQGHLREMGIATVADLPVGERLQEHPFFFNVYALKTSAIAMTPAGGAIAWTRSQHAAPDDLDLHISGTHLIDPKASPTGGAIVLACAVTLPKSNGSVRLTSRDPRVAPNIRYNFFEQENDLDRMVEAVELSRKIGRSAPFADLVDHEMTPGSSVLEGKALRQNIVNNVAGYQHPTSSVPMGADGDKAAVVNNWGAVRGIAALRVVDASIIPDIPSVATNLTTIMLAERIGAHLTR
>CP027728.1|AZF12480.1|4693756_4694503_-|ABC-transporter,-ATP-binding-protein
MPYIKRIEILENYREENNFPFYLPSIQSISKIELHPVINFFVGENGSGKSTLLEAIAVSCGFNHEGGSKNFKFSSSDEKSLLSKALRLSRTAKRPRDGYFYRAESFYNVITEMNKLDCGPGGPAIKDSYGGNDLHTRSHGEAFMDLILHRFGGNGLYLLDEPESALSPQRQLSLLVRIAELAKQNSQFIIATHSPILIAYPGARIWEFTNSGLEEKEYSETENYLIMKSYFASPESFMSKLFDEKHDF
>CP027728.1|AZF12479.1|4692637_4692958_+|hypothetical-protein
MMDVLMFAGFVVFASTFAIGMWALSRWLRSKGYGPQLDRLDRQFTALQLRVSPLALSASYRMFAGAHTMNRLPLLGSKSSATLNQQVLMAIQAAQEAQKQDKRGEH
>CP027728.1|AZF12478.1|4691015_4692635_+|Conjugative-transfer-protein-TrbL
MDPRLLLFLTLAGVFVGGDAVAATDLSHADTSIQGLLDLVLQQSHQWSGKLYDYAIRLFWLLASIQFIWTFMPLVMKQADFGEILGELLRFILVIGFFLAVMKYSVEWSTAIVDSFRDAAASAGGLGRALEPGDMLAVALDFGRTMVEGISVFSPAKGLLIAVCAILVLACFAFIAAFMFVTLVESYVIINASVLFIGFGGSQWTRDFAIAPMRFTVAIGAKLFVLTLIVGLIIQSAKQWLAAYTNDEASLMTMVGLALVCCYLTKTIPDLIGAMISGTSMGGGSAIGGMAVAGAAGAAAAAATIATAGAAAPAAALGAAGTGSAAGAGAAGIGGLGGGGLAGAINSSFAGANSAGGAASAMGAAASSGVGASTGGAAVKGVSSAGAKVGGSSANLAGQASAPPSSPSSGVQQAAKQAGKTARGNDNEDQQTTPNGGVVSSGSALAHAADGGAKMLGVMASMAVPGMENAHALSLGAGSPPSVSDDTNSTTPTNGAEPVTEASQAEPNVIRPASNTNSTSGRLASLKVPGMTSNDQPEK
>CP027728.1|AZF12477.1|4690824_4691013_+|hypothetical-protein
MTISRWLIALMCAGSVLTGSMVTMMVQSNSECTAVAEQQRQQRDADLSFEARPNTRGGVKGY
>CP027728.1|AZF12476.1|4690195_4690822_+|Conjugative-transfer-protein-TrbJ
MFEYAEAVNTALNTAEQLQTQIQQYQNMVTQGTGLPSTMFGSIAADLKNVANLYTRSQSLGRQIQNMDSQFNTAFPGFQSYLNQAANSAEVPAHERYQKWSEQGSNNVKTALEAANLNTSKFESEDIQLDRMVARSQSAVGRMQAIQAGNEIASQNVQQLQKLRDLMATQINMQGNYMAQQGDRKAASEAAEQQFEARKNTRGGVKEY
>CP027728.1|AZF12486.1|4701048_4701516_-|hypothetical-protein
MSGGNVVTPTSTSALARVMLYQPSQRPQHRAGDWADTSFGRCRVVGRLGQRHADVMDAILYCSERKRVVDDGGIELLVDPARLRKTLSESRYSLSQLEKLLAELRVATITIETPQFDFPIIGGLIDHVVPSEKTRPNPLTGGSGVCGRCGSALLL
>CP027728.1|AZF12487.1|4701502_4702381_-|Replication-protein-RepA
MAIDLRAAFENEPPTLDFIWPGFLAGTVGALVAPGATGKSFWALEAAMAIACSVAGGDLVGLAPSCAGRVVYFAGEDPEVALVRRIHAIGQHLNQQAREAIAKNLVLESIMGKRLNVMDDRHLARITEFCEGARLIVLDTLSRIHDRDENSNGDMSRLVATLEHVATNTGASVLYLHHVSKGSAREGQTDQQQAARGASALIDNARWCGFVAKMTEEQAKILSDRAYDRQPIGNDRRGFFVRFGVSKQNYDATPLEQWYKRHDGGVLVPVVLEAVKKERVLHIVSGSDDERW
>CP027728.1|AZF12488.1|4702384_4702615_-|DNA-binding-protein,-putative
MEKESRKSSKVLISKKQLLAMIPLCERTIYNFEKQGKFPRRIAVSSRKVVWDLEEVETWIDTCRQSGPATRPGMGA
>CP027728.1|AZF12489.1|4702918_4704178_-|Integrase
MSAFLSMVFFSMESVTAMLTDTKLRNLKPQEKLYKVNDRDGLYVAVTAAGSISFRYNYSINGRQETITFGRYGVGGITLAEARERLGEAKKMVSAGKSPAKEKARAKARTKGAETFDAWAEKWLRGYQMADSTRDMRRSVYERELKPHFGNQKLVEINHEDLRTLTDAIVERGAPATAVHSREIVMQVFRWAIERGQKVENPADLVRPASIAKFEPRDRALGPDEIALMYQYLDRIGTASSVRVAAKLLLLTMVRKSELTNATWNEINFSEALWTIPKERMKRRNAHLVFLSQQALDFFIALKTFAGGSDYVFPSRYDSDLPMSTATINQVLTLTYRLAQKEGQPLSKFGPHDLRRTASTLLHEAGYNSDWIEKCLAHEQKGVRAVYNKAEYRDQRRAMLQDWADMIDEWTRKRTRSES
>CP027728.1|AZF12490.1|4704436_4706014_-|GMP-synthase-[glutamine-hydrolyzing],-amidotransferase-subunit
MALDIHAHRILILDFGSQYTQLIARRVREIGVYCELHPFDMDDAAIREFAPKGVILAGGPESVHEANSPRCPQAVFDLGVPVFGICYGMQTMAEQLGGKVEGSELREFGYARVDVVGKSRLLDGIEDHIDADGLFGLDVWMSHGDKVTKMPEDFHILASTPSCPIAGMYSDERRYYGVQFHPEVTHTKQGGRILSRFILDICECEALWTPSKIAEDAIAQVRAQVGTDNVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGEQVMAMFAENMGVKVIRANAEEQFLNNLAGESDPEKKRKIIGRTFIDVFDAQAKHLDNIKYLAQGTIYPDVIESAGAKSGKAHVIKSHHNVGGLPEEMNLKLVEPLRELFKDEVRRLGLELGLPYDMVYRHPFPGPGLGVRILGEVKKEYADLLRRADHIFIEELRKADWYHKVSQAFVVFQPVKSVGVVGDGRRYAWVVALRAVETIDFMTARWAHLPYELLETVSGRIINEIEGISRVTYDVSSKPPATIEWE
>CP027728.1|AZF12491.1|4706095_4707565_-|Inosine-5'-monophosphate-dehydrogenase
MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQAAEVRKVKRYEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHDGDLVGIVTSRDVRFENRLEVTVREVMTPKERLVTVKEGADKNDVRELLHKHRIERVLIVDDKFALKGMMTVNDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVSALVAAGVDVVVVDTAHGHSKGVIDRVRWVKQNFPDVQVIGGNIATGAAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSSDRYFQDSSAGAEKLVPEGIEGRVPYKGTLSAIIHQLMGGLRSSMGYTGSADIEEMRTKPEFVRITGAGMAESHVHDVQITKEAPNYRVG
>CP027728.1|AZF12492.1|4707799_4708348_-|ABC-type-sugar-transport-system,-ATPase-component
MNSQSILVPKISTLPVHEPRARAIVRWLVRKNIIKEELTTCGRTGNRMAYALADGARAVVLHPQALPFNEPVNGLEIIYKRCIYTPAKGFLEEAGCPECRKEVGEALFDSLEDWMPGHTDNFTCPLCGHEDDINGFLFLQECGFSNLGFIFNNWAEAGFKQSFIDEFADWLDQKIAWVKVEL
>CP027728.1|AZF12493.1|4708605_4709373_-|putative-membrane-protein
MNVVELMSQWSFGAVEWLVIGLGIVVAYIVFGIAGFGTALVAGPVLILFMPLSKIIPLLVLLDFVAAFGGLLQTRRDVSKPELLRLLPCMAIGCTLGVVFLLNLHSDLLLLLMGLFISAYAVYSLAVKARPTQLAAGWSIPMGTVGGLFGALFGSGGFLYAIYLNSRLPKDAARATQSALISCSTVVRLSLFLIAGVYADLPLLMLAVCLLPAMALGLWCGRRLTMRMSREAFVRLVTWLVLASGIALIGRYLST
>CP027728.1|AZF12494.1|4709496_4710876_+|Exodeoxyribonuclease-VII-large-subunit
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDSGAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKEKLRAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTAVQGREAITQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRLSHSRLRLEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRHLALLRQRLDSLAERLPRAMREGLKARRLQLQSQVQTLQVVSPLATLGRGYSILLDERGQAVRNAAQTHTGQRLTARLGEGQLQVRVEDNHLTPVTLSLLD
>CP027728.1|AZF12495.1|4710879_4711701_+|Peptidase,-M23/M37-family
MPRFLSLLMLVCLTFNAHADSYITRLLNKPVPGGVAVVDLGPAATAPKATYLNRPVLVVKEQDNWLAIVGIPLTVKPGTERIVHGGQQLPFVVGFKKYPEQRITLKNKSQVNPEPAQLKRIEAELAVQLKAYRSFSPNTPSNLLLDKPVNGPLSSKFGVRRFFNGEERNPHSGLDFAVGAGTPIKTPAAGKVILTGNYFFNGNTVFVDHGQGFISMFCHMSKIDVKVGDQLTRGAVVGKVGSTGRATGPHMHWNVSLNDARVDPAIFIGAFQP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1294373 : 1375874

100

uncultured_Caudovirales_phage(54.39%)

protease,tRNA,plate,tail,portal,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZF09355.1\|1294373_1294844_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
AZF09356.1\|1294905_1295949_-	Ferric iron ABC transporter, ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.6e-19	36.4
AZF09357.1\|1295945_1296869_-	Ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	1.2e-18	27.4
AZF09358.1\|1297298_1299407_+	Formate dehydrogenase-O, major subunit	NA	NA	NA	NA
AZF09359.1\|1299506_1299845_+	Glutaredoxin-related protein	NA	NA	NA	NA
AZF09360.1\|1300035_1300506_-	Bacterioferritin	NA	NA	NA	NA
AZF09361.1\|1300706_1300925_-	Bacterioferritin-associated ferredoxin	NA	NA	NA	NA
AZF09362.1\|1300990_1301149_-	hypothetical protein	NA	NA	NA	NA
AZF09363.1\|1301170_1301773_+	Alkyl hydroperoxide reductase subunit C-like protein	NA	NA	NA	NA
AZF09364.1\|1301838_1302513_-	Ribonuclease T	NA	NA	NA	NA
AZF09365.1\|1302509_1303556_-	Dihydroorotase	NA	NA	NA	NA
AZF09366.1\|1303712_1304621_+	Sodium-type flagellar protein motY precursor	NA	NA	NA	NA
AZF09367.1\|1304750_1305968_+	Argininosuccinate synthase	NA	NA	NA	NA
AZF09368.1\|1306262_1306376_+	hypothetical protein	NA	NA	NA	NA
AZF09369.1\|1306594_1307227_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA
AZF09370.1\|1307314_1307497_-	hypothetical protein	NA	NA	NA	NA
AZF09371.1\|1307603_1308242_-	Endonuclease III	NA	NA	NA	NA
AZF09372.1\|1308311_1309286_-	Electron transport complex protein RnfB	NA	NA	NA	NA
AZF09373.1\|1309369_1311421_-\|tRNA	Methionyl-tRNA synthetase	NA	NA	NA	NA
AZF09374.1\|1311593_1312688_+	[4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)	NA	NA	NA	NA
AZF09375.1\|1313142_1313466_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZF09376.1\|1313608_1316161_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	2.8e-28	21.5
AZF09377.1\|1316246_1317491_-	Integrase	A0A1I9KF78	Aeromonas_phage	2.2e-71	41.0
AZF09378.1\|1317754_1318681_-	hypothetical protein	NA	NA	NA	NA
AZF09379.1\|1318677_1320669_-	C-5 cytosine-specific DNA methylase	A0A0U1T6D1	Pseudomonas_phage	1.5e-202	73.0
AZF09380.1\|1320994_1321537_-	putative hydrolase, HD superfamily	A0A2D1GNL9	Pseudomonas_phage	9.0e-30	43.0
AZF09381.1\|1321533_1321755_-	hypothetical protein	NA	NA	NA	NA
AZF09382.1\|1321751_1322333_-	hypothetical protein	NA	NA	NA	NA
AZF09383.1\|1322386_1322584_-	hypothetical protein	NA	NA	NA	NA
AZF09384.1\|1322585_1322906_-	transcriptional regulator, putative	NA	NA	NA	NA
AZF09385.1\|1322902_1323274_-	hypothetical protein	NA	NA	NA	NA
AZF09386.1\|1323414_1323696_-	DNA-binding protein Roi-related protein	NA	NA	NA	NA
AZF09387.1\|1323705_1324284_-	hypothetical protein	NA	NA	NA	NA
AZF09388.1\|1324280_1324457_-	hypothetical protein	NA	NA	NA	NA
AZF09389.1\|1324576_1325275_-\|protease	SOS-response repressor and protease LexA	Q94MM0	Bordetella_phage	5.2e-30	39.8
AZF09390.1\|1325381_1325639_+	Regulatory protein Cro of bacteriophage	A0A0D4DBS7	Acinetobacter_phage	8.4e-10	44.9
AZF09391.1\|1325968_1326487_+	hypothetical protein	NA	NA	NA	NA
AZF09392.1\|1326479_1326707_+	hypothetical protein	NA	NA	NA	NA
AZF09393.1\|1326696_1328913_+	DNA primase, phage associated	A0A2D1GN57	Marinobacter_phage	6.9e-193	47.3
AZF09394.1\|1328905_1329265_+	hypothetical protein	NA	NA	NA	NA
AZF09395.1\|1329532_1329988_-	hypothetical protein	NA	NA	NA	NA
AZF09396.1\|1329962_1330127_+	Holin	A0A2H4J893	uncultured_Caudovirales_phage	9.3e-15	79.2
AZF09397.1\|1330655_1330934_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	1.2e-22	63.6
AZF09398.1\|1330937_1332962_+\|terminase	terminase, large subunit, putative	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	80.3
AZF09399.1\|1332963_1333170_+	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	1.2e-22	76.5
AZF09400.1\|1333169_1334651_+\|portal	phage portal protein, lambda family	A0A2H4JFL5	uncultured_Caudovirales_phage	3.0e-245	85.4
AZF09401.1\|1334647_1335790_+\|protease	Prophage Clp protease-like protein	A0A2H4JDI2	uncultured_Caudovirales_phage	5.0e-139	69.0
AZF09402.1\|1335786_1336125_+	hypothetical protein	A0A2H4JF15	uncultured_Caudovirales_phage	2.3e-44	83.5
AZF09403.1\|1336187_1337183_+	Phage protein	A0A2H4J890	uncultured_Caudovirales_phage	1.3e-170	88.5
AZF09404.1\|1337185_1337506_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.8e-39	70.5
AZF09405.1\|1337502_1338162_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	2.3e-80	69.9
AZF09406.1\|1338161_1338677_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.7e-62	66.7
AZF09407.1\|1338673_1339240_+\|plate	Baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	2.9e-55	73.2
AZF09408.1\|1339496_1339616_-	hypothetical protein	NA	NA	NA	NA
AZF09409.1\|1339680_1339899_+\|plate	Phage baseplate assembly protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.9e-18	63.8
AZF09410.1\|1339895_1340777_+\|plate	Baseplate assembly protein J	A0A2H4JFK9	uncultured_Caudovirales_phage	4.0e-104	67.5
AZF09411.1\|1340778_1341468_+\|tail	Phage tail fiber	A0A2H4JDH5	uncultured_Caudovirales_phage	1.6e-68	69.1
AZF09412.1\|1341464_1343351_+\|tail	Phage tail fiber protein	A4PE45	Ralstonia_virus	2.2e-67	49.6
AZF09413.1\|1343361_1343751_+	phage protein	NA	NA	NA	NA
AZF09414.1\|1343853_1345020_+\|tail	Phage tail sheath monomer	A0A2H4J869	uncultured_Caudovirales_phage	1.8e-168	77.1
AZF09415.1\|1345032_1345536_+\|tail	Phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	1.2e-63	72.5
AZF09416.1\|1345550_1346150_+	hypothetical protein	A0A2H4J873	uncultured_Caudovirales_phage	1.3e-16	50.0
AZF09417.1\|1346300_1349450_+	Phage protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.5e-87	36.4
AZF09418.1\|1349459_1350305_+	Phage protein U	A0A2H4J875	uncultured_Caudovirales_phage	1.5e-111	69.6
AZF09419.1\|1350312_1350486_+\|tail	Phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.4e-16	71.4
AZF09420.1\|1350567_1351614_+	Phage protein D	A0A2H4JBF6	uncultured_Caudovirales_phage	8.4e-149	76.2
AZF09421.1\|1351662_1352226_+	Lytic enzyme	B5TK83	Pseudomonas_phage	8.6e-84	80.6
AZF09422.1\|1352207_1352750_+	hypothetical protein	B5TK84	Pseudomonas_phage	1.9e-43	57.5
AZF09423.1\|1352899_1353694_+	Dam modification methylase	C7BGE1	Burkholderia_phage	5.4e-100	65.8
AZF09424.1\|1353699_1354401_-	Gifsy-2 prophage protein	A0A2H4J991	uncultured_Caudovirales_phage	7.8e-58	50.4
AZF09425.1\|1354621_1354927_+	Error-prone repair protein UmuD	A0A1L5C2A3	Pseudoalteromonas_phage	2.1e-12	43.4
AZF09426.1\|1354919_1356197_+	Error-prone, lesion bypass DNA polymerase V (UmuC)	I6RSM4	Salmonella_phage	3.5e-109	49.8
AZF09427.1\|1356221_1357250_-	hypothetical protein	NA	NA	NA	NA
AZF09428.1\|1357792_1358164_-	hypothetical protein	NA	NA	NA	NA
AZF09429.1\|1358156_1358645_-	GepA protein	D0UIM3	Aggregatibacter_phage	8.4e-27	44.5
AZF09430.1\|1358908_1359643_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	1.1e-118	87.3
AZF09431.1\|1359686_1361018_-	Transposase	NA	NA	NA	NA
AZF09432.1\|1361265_1361385_+	hypothetical protein	NA	NA	NA	NA
AZF09433.1\|1361668_1362007_+	Holin	B5TK61	Pseudomonas_phage	2.8e-45	81.8
AZF09434.1\|1362026_1362542_+	hypothetical protein	NA	NA	NA	NA
AZF09435.1\|1362545_1363154_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	1.1e-44	52.3
AZF09436.1\|1363166_1363499_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	1.0e-36	69.1
AZF09437.1\|1363495_1364491_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	7.8e-112	64.1
AZF09438.1\|1364487_1365126_+\|tail	Phage tail fiber	A0A2H4JDK0	uncultured_Caudovirales_phage	2.5e-39	52.5
AZF09439.1\|1365122_1365632_+\|tail	Phage tail fiber protein	A2I2X8	Vibrio_virus	4.6e-36	63.6
AZF09440.1\|1365681_1366302_+	hypothetical protein	NA	NA	NA	NA
AZF09441.1\|1366314_1366572_+	hypothetical protein	A0A1L5C071	Aquamicrobium_phage	4.7e-05	48.5
AZF09442.1\|1366659_1366833_+	hypothetical protein	NA	NA	NA	NA
AZF09443.1\|1366835_1368002_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	7.2e-125	57.2
AZF09444.1\|1368001_1368508_+	hypothetical protein	Q6R4W3	Vibrio_virus	3.8e-22	35.1
AZF09445.1\|1368560_1369142_+	hypothetical protein	B0ZSH0	Halomonas_phage	5.9e-27	37.7
AZF09446.1\|1369138_1369264_+	hypothetical protein	NA	NA	NA	NA
AZF09447.1\|1369270_1371490_+\|tail	Phage tail length tape-measure protein	NA	NA	NA	NA
AZF09448.1\|1371489_1371873_+\|tail	Unclassified tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	8.6e-35	55.9
AZF09449.1\|1371865_1372078_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	2.0e-17	62.9
AZF09450.1\|1372087_1373089_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	2.0e-99	54.8
AZF09451.1\|1373110_1373668_+	Lytic enzyme	B5TK83	Pseudomonas_phage	8.0e-74	71.6
AZF09452.1\|1373655_1374150_+	hypothetical protein	A0A2H4IZW4	uncultured_Caudovirales_phage	1.7e-35	58.8
AZF09453.1\|1374231_1374732_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	6.3e-70	83.1
AZF09454.1\|1374815_1375874_+	RecA protein	A0A0S2MVG1	Bacillus_phage	2.4e-111	62.4

DBSCAN-SWA_2

1436421 : 1524779

110

Pseudomonas_phage(43.64%)

protease,tRNA,holin,integrase,tail,portal,capsid,terminase

attL 1435984:1436014|attR 1508413:1508443

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1435984:1436014	attL	NA	NA	NA	NA
AZF09513.1\|1436421_1437627_-	Cysteine desulfurase, CsdA	Q2XUY6	environmental_halophage	1.1e-70	36.9
AZF09514.1\|1437694_1438729_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZF09515.1\|1438760_1439123_-	glutathione-dependent thiol reductase	NA	NA	NA	NA
AZF09516.1\|1439173_1440277_-\|integrase	Phage integrase	A0A0U4JIT5	Pseudomonas_phage	1.8e-146	69.8
AZF09517.1\|1440257_1440500_-	excisionase, putative	NA	NA	NA	NA
AZF09518.1\|1440496_1440724_-	hypothetical protein	A0A2H4J1L2	uncultured_Caudovirales_phage	1.3e-17	73.5
AZF09519.1\|1440711_1441032_-	hypothetical protein	NA	NA	NA	NA
AZF09520.1\|1441082_1441424_-	hypothetical protein	S4TTI6	Salmonella_phage	2.3e-23	49.5
AZF09521.1\|1441420_1441756_-	hypothetical protein	NA	NA	NA	NA
AZF09522.1\|1441805_1441997_-	hypothetical protein	NA	NA	NA	NA
AZF09523.1\|1442047_1442548_-	hypothetical protein	NA	NA	NA	NA
AZF09524.1\|1442558_1442987_-	hypothetical protein	I6NP82	Burkholderia_phage	6.7e-12	31.9
AZF09525.1\|1443161_1443941_-	hypothetical protein	A0A2H4JCP9	uncultured_Caudovirales_phage	1.3e-10	28.4
AZF09526.1\|1444009_1444387_-	hypothetical protein	A0A2H4J2C6	uncultured_Caudovirales_phage	5.7e-23	44.5
AZF09527.1\|1444391_1444703_-	hypothetical protein	A0A2H4J1V6	uncultured_Caudovirales_phage	1.6e-15	48.5
AZF09528.1\|1444766_1445762_-	Retron-type RNA-directed DNA polymerase	A0A0N7AE80	Bacillus_phage	8.5e-42	35.0
AZF09529.1\|1446135_1446489_-	hypothetical protein	NA	NA	NA	NA
AZF09530.1\|1446547_1447135_-	hypothetical protein	A0A0A0YR68	Pseudomonas_phage	5.2e-23	40.1
AZF09531.1\|1447253_1447730_-	Phage protein	NA	NA	NA	NA
AZF09532.1\|1447787_1448153_-	hypothetical protein	NA	NA	NA	NA
AZF09533.1\|1448234_1448549_-	hypothetical protein	NA	NA	NA	NA
AZF09534.1\|1448545_1448908_-	hypothetical protein	NA	NA	NA	NA
AZF09535.1\|1449159_1449648_-	hypothetical protein	NA	NA	NA	NA
AZF09536.1\|1450065_1450755_-	Transcriptional regulator	W6MVG5	Pseudomonas_phage	1.6e-71	58.5
AZF09537.1\|1450949_1451153_+	hypothetical protein	NA	NA	NA	NA
AZF09538.1\|1451226_1451649_+	hypothetical protein	A0A2D1GNM7	Pseudomonas_phage	1.3e-71	97.1
AZF09539.1\|1451798_1452464_+	hypothetical protein	A0A0U4J8Z7	Pseudomonas_phage	3.3e-58	56.5
AZF09540.1\|1452475_1453252_+	hypothetical protein	A0A1W6JTD5	Pseudomonas_phage	6.6e-34	54.5
AZF09541.1\|1453251_1454013_+	Replication protein P	A0A2D1GNB3	Pseudomonas_phage	3.3e-86	62.7
AZF09542.1\|1453984_1454281_+	hypothetical protein	A0A2D1GNQ4	Pseudomonas_phage	1.5e-47	89.8
AZF09543.1\|1454277_1454709_+	Phage protein	A0A2D1GNH3	Pseudomonas_phage	9.6e-67	88.8
AZF09544.1\|1454705_1455023_+	hypothetical protein	A0A2H4J249	uncultured_Caudovirales_phage	7.9e-10	43.0
AZF09545.1\|1455019_1456300_+\|integrase	Phage integrase	A0A2D1GND4	Pseudomonas_phage	4.2e-126	53.6
AZF09546.1\|1456302_1456482_+	hypothetical protein	NA	NA	NA	NA
AZF09547.1\|1456561_1456843_+	hypothetical protein	NA	NA	NA	NA
AZF09548.1\|1456839_1457157_+	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	4.7e-47	89.5
AZF09549.1\|1457160_1457514_+	antitermination protein Q, putative	A0A2D1GNB4	Pseudomonas_phage	3.1e-55	86.3
AZF09550.1\|1457728_1458058_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.1e-13	42.5
AZF09551.1\|1458054_1458432_+	Glutamate synthase [NADPH] large chain	NA	NA	NA	NA
AZF09552.1\|1458400_1458589_+	hypothetical protein	NA	NA	NA	NA
AZF09553.1\|1458652_1458832_+	hypothetical protein	NA	NA	NA	NA
AZF09554.1\|1458822_1459197_+\|holin	Phage holin	A0A2D1GNP5	Pseudomonas_phage	1.4e-45	67.7
AZF09555.1\|1459356_1459842_+\|terminase	Phage terminase, small subunit	A0A2D1GNP3	Pseudomonas_phage	3.0e-85	97.5
AZF09556.1\|1459841_1461563_+\|terminase	Phage terminase, large subunit	A0A2D1GNU5	Pseudomonas_phage	0.0e+00	95.4
AZF09557.1\|1461562_1462834_+\|portal	Phage portal protein	A0A286S1N5	Klebsiella_phage	4.1e-182	74.2
AZF09558.1\|1462852_1463515_+\|capsid	Phage capsid and scaffold	F1C583	Cronobacter_phage	2.2e-78	67.0
AZF09559.1\|1463518_1464682_+\|capsid	Phage major capsid protein	F1C582	Cronobacter_phage	3.8e-166	78.3
AZF09560.1\|1464717_1464903_+	hypothetical protein	NA	NA	NA	NA
AZF09561.1\|1464899_1465238_+	hypothetical protein	A0A2H4J8C5	uncultured_Caudovirales_phage	6.9e-12	39.4
AZF09562.1\|1465556_1466051_+	hypothetical protein	A0A0U3TGT7	Pseudomonas_phage	1.6e-57	71.2
AZF09563.1\|1466047_1466416_+	hypothetical protein	Q9MCA6	Pseudomonas_phage	5.5e-31	51.7
AZF09564.1\|1466475_1466967_+\|tail	major tail protein, putative	H2BDC0	Pseudomonas_virus	2.8e-54	67.4
AZF09565.1\|1466976_1467324_+	hypothetical protein	NA	NA	NA	NA
AZF09566.1\|1467380_1467608_+	hypothetical protein	NA	NA	NA	NA
AZF09567.1\|1467633_1470342_+\|tail	Phage tail length tape-measure protein 1	K7P6S7	Enterobacteria_phage	1.4e-107	33.7
AZF09568.1\|1470347_1470686_+\|tail	Phage minor tail protein	A0A1B0VMG7	Pseudomonas_phage	3.3e-38	65.2
AZF09569.1\|1470695_1471448_+\|tail	Phage minor tail protein	A0A1B0VNE0	Pseudomonas_phage	5.6e-139	92.0
AZF09570.1\|1471450_1472263_+\|tail	Phage tail assembly protein	A0A1B0VP68	Pseudomonas_phage	1.0e-138	88.8
AZF09571.1\|1472240_1472378_+	hypothetical protein	NA	NA	NA	NA
AZF09572.1\|1472400_1472622_-	hypothetical protein	NA	NA	NA	NA
AZF09573.1\|1472704_1472833_+	hypothetical protein	NA	NA	NA	NA
AZF09574.1\|1472819_1473119_+	hypothetical protein	NA	NA	NA	NA
AZF09575.1\|1473940_1474123_+\|tail	Phage tail assembly protein I	A0A1B0VMI5	Pseudomonas_phage	4.5e-26	98.3
AZF09576.1\|1474181_1477907_+\|tail	Phage tail fiber protein	A0A1B0VMH5	Pseudomonas_phage	0.0e+00	70.2
AZF09577.1\|1478232_1478880_+	hypothetical protein	A0A2H4IY64	uncultured_phage	4.0e-109	90.1
AZF09578.1\|1478907_1479831_+\|tail	Phage tail fiber	A0A2H4J1J6	uncultured_Caudovirales_phage	6.7e-110	63.5
AZF09579.1\|1479871_1480297_+	Cell wall hydrolase	A0A2D1GNI1	Pseudomonas_phage	7.2e-75	92.2
AZF09580.1\|1480349_1480703_-	hypothetical protein	A0A2H4IZV2	uncultured_Caudovirales_phage	1.1e-33	64.1
AZF09581.1\|1480867_1481014_+	hypothetical protein	NA	NA	NA	NA
AZF09582.1\|1481202_1482846_+	Na+/H+ antiporter	NA	NA	NA	NA
AZF09583.1\|1482838_1483579_-	hypothetical protein	NA	NA	NA	NA
AZF09584.1\|1483695_1484895_-	N-succinyl-L,L-diaminopimelate aminotransferase, type 2	NA	NA	NA	NA
AZF09585.1\|1487820_1488603_-	Methionine aminopeptidase	NA	NA	NA	NA
AZF09586.1\|1488736_1488937_-	hypothetical protein	NA	NA	NA	NA
AZF09587.1\|1488979_1489717_+	SSU ribosomal protein S2p (SAe)	NA	NA	NA	NA
AZF09588.1\|1489920_1490784_+	Translation elongation factor Ts	NA	NA	NA	NA
AZF09589.1\|1490995_1491739_+	Uridine monophosphate kinase	NA	NA	NA	NA
AZF09590.1\|1491735_1492293_+	Ribosome recycling factor	NA	NA	NA	NA
AZF09591.1\|1492310_1493066_+	Undecaprenyl diphosphate synthase	R9W0U9	Flavobacterium_phage	1.9e-17	37.3
AZF09592.1\|1493066_1493873_+	Phosphatidate cytidylyltransferase	NA	NA	NA	NA
AZF09593.1\|1493869_1495075_+	1-deoxy-D-xylulose 5-phosphate reductoisomerase	NA	NA	NA	NA
AZF09594.1\|1495113_1496466_+\|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	NA	NA	NA	NA
AZF09595.1\|1496540_1498928_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA
AZF09596.1\|1498973_1499477_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA
AZF09597.1\|1499480_1500536_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA
AZF09598.1\|1500647_1501088_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZF09599.1\|1501084_1501861_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZF09600.1\|1501863_1503003_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA
AZF09601.1\|1502999_1503632_+	Ribonuclease HII	R4THQ2	Phaeocystis_globosa_virus	1.4e-18	34.4
AZF09602.1\|1503709_1507231_+	DNA polymerase III alpha subunit	A0A1C9LWZ5	Streptomyces_phage	4.6e-199	36.5
AZF09603.1\|1507383_1508331_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA
AZF09604.1\|1508451_1509804_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
1508413:1508443	attR	NA	NA	NA	NA
AZF09605.1\|1509849_1509978_+	hypothetical protein	NA	NA	NA	NA
AZF09606.1\|1510077_1511709_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.1e-158	53.3
AZF09607.1\|1511714_1512560_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	E3T537	Cafeteria_roenbergensis_virus	1.2e-49	42.8
AZF09608.1\|1512716_1514006_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	4.8e-138	59.4
AZF09609.1\|1514046_1514160_-	hypothetical protein	NA	NA	NA	NA
AZF09610.1\|1514177_1514456_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AZF09611.1\|1514452_1515160_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZF09612.1\|1515279_1516176_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA
AZF09613.1\|1516285_1517398_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	4.3e-34	30.1
AZF09614.1\|1517406_1518252_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZF09615.1\|1518306_1518780_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZF09616.1\|1518776_1519646_+\|tRNA	tRNA pseudouridine(13) synthase	NA	NA	NA	NA
AZF09617.1\|1519821_1520571_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.6e-61	49.4
AZF09618.1\|1520570_1521248_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.1e-43	53.1
AZF09619.1\|1521457_1522294_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
AZF09620.1\|1522399_1523407_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
AZF09621.1\|1523615_1523825_-	Cold shock protein of CSP family	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
AZF09622.1\|1524212_1524779_+	Deoxycytidine triphosphate deaminase	S5VM63	Pseudomonas_phage	6.2e-74	73.3

DBSCAN-SWA_3

3451151 : 3457371

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZF11378.1\|3451151_3451544_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	7.6e-55	82.2
AZF11379.1\|3451545_3451896_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	6.9e-39	71.1
AZF11380.1\|3451895_3452174_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.9e-24	57.6
AZF11381.1\|3452170_3452506_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	1.3e-42	72.1
AZF11382.1\|3452502_3453504_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	5.0e-167	86.0
AZF11383.1\|3453592_3454588_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZF11384.1\|3454695_3456090_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZF11385.1\|3456090_3457371_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.3e-98	53.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage