CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027751	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR18 chromosome, complete genome	3 crisprs	DinG,csa3,cas3,PD-DExK,DEDDh,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027751_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027751_1

409140-409255

Orphan

Consensus_repeat	Method
GGGCTCGTCGCTGTGAGCGTGATGAGCCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027751_1

>merge|CP027751|1|409140-409255|CRISPRCasFinder
GGGCTCGTCGCTGTGAGCGTGATGAGCCCGGGTGTTAAAGAGGGAATCCCCGGCCTGCCTGTACCAAGGTTCCCGAAACGGGTGGGGCTCGTCGCTGAGAGCGTGATGAGCCCGGG

>CP027751|1|1|409140-409255|CRISPRCasFinder
GGGCTCGTCGCTGTGAGCGTGATGAGCCCGGG	TGTTAAAGAGGGAATCCCCGGCCTGCCTGTACCAAGGTTCCCGAAACGGGTG
GGGCTCGTCGCTGAGAGCGTGATGAGCCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP027751.1\|AZE33425.1\|400413_401169_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	unknown	unknown	gnl\|CDD\|223904
CP027751.1\|AZE33440.1\|415328_417050_+\|Acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173843
CP027751.1\|AZE33434.1\|408492_408933_+\|hypothetical-protein	unknown	unknown	unknown
CP027751.1\|AZE33439.1\|414316_415216_-\|Transcriptional-regulator,-LysR-family	unknown	unknown	gnl\|CDD\|176139
CP027751.1\|AZE33436.1\|411264_412350_-\|Nitrogen-regulation-protein-NtrB	unknown	unknown	gnl\|CDD\|226370
CP027751.1\|AZE33444.1\|420692_421895_+\|Acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|181242
CP027751.1\|AZE33430.1\|406609_407023_+\|Rhodanese-related-sulfurtransferase-YibN	unknown	unknown	gnl\|CDD\|238089
CP027751.1\|AZE33428.1\|403505_404792_-\|Murein-hydrolase-activator-EnvC	unknown	unknown	gnl\|CDD\|227278
CP027751.1\|AZE33433.1\|408038_408494_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223297
CP027751.1\|AZE33426.1\|401241_402000_-\|Putative-periplasmic-protein-YibQ	unknown	unknown	gnl\|CDD\|377404
CP027751.1\|AZE33431.1\|407024_407279_+\|Glutaredoxin-3-(Grx3)	unknown	unknown	gnl\|CDD\|274017
CP027751.1\|AZE33443.1\|419130_420657_+\|3-hydroxyacyl-CoA-dehydrogenase-PaaC	unknown	unknown	gnl\|CDD\|236211
CP027751.1\|AZE33429.1\|404928_406458_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
CP027751.1\|AZE33437.1\|412346_412658_-\|hypothetical-protein	unknown	unknown	unknown
CP027751.1\|AZE33438.1\|412708_414121_-\|putative-MFS-type-transporter	unknown	unknown	gnl\|CDD\|340927
CP027751.1\|AZE33435.1\|409831_411268_-\|Nitrogen-regulation-protein-NtrC	unknown	unknown	gnl\|CDD\|273818
CP027751.1\|AZE33441.1\|417082_418270_+\|L-carnitine-dehydratase/bile-acid-inducible-protein-F	unknown	unknown	gnl\|CDD\|367110
CP027751.1\|AZE33442.1\|418339_419134_+\|Enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|236162
CP027751.1\|AZE33432.1\|407335_407818_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	unknown	unknown	gnl\|CDD\|180234
CP027751.1\|AZE33427.1\|402163_403474_-\|Carboxyl-terminal-protease	unknown	unknown	gnl\|CDD\|223864

Protein	Function_ID	Function_description	E-value
CP027751.1\|AZE33425.1\|400413_401169_+\|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain	gnl\|CDD\|223904	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].	2.22267e-23
CP027751.1\|AZE33440.1\|415328_417050_+\|Acyl-CoA-dehydrogenase	gnl\|CDD\|173843	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.	4.27213e-148
CP027751.1\|AZE33444.1\|420692_421895_+\|Acetyl-CoA-acetyltransferase	gnl\|CDD\|181242	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase.	0
CP027751.1\|AZE33439.1\|414316_415216_-\|Transcriptional-regulator,-LysR-family	gnl\|CDD\|176139	cd08448, PBP2_LTTR_aromatics_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to regulators involved in the catabolism of aromatic compounds, contains type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type regulator similar to CbnR which is involved in the regulation of chlorocatechol breakdown. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05672e-89
CP027751.1\|AZE33436.1\|411264_412350_-\|Nitrogen-regulation-protein-NtrB	gnl\|CDD\|226370	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms].	1.36849e-164
CP027751.1\|AZE33430.1\|406609_407023_+\|Rhodanese-related-sulfurtransferase-YibN	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	6.79697e-24
CP027751.1\|AZE33428.1\|403505_404792_-\|Murein-hydrolase-activator-EnvC	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	6.03157e-100
CP027751.1\|AZE33433.1\|408038_408494_-\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	1.05147e-88
CP027751.1\|AZE33426.1\|401241_402000_-\|Putative-periplasmic-protein-YibQ	gnl\|CDD\|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	2.57061e-92
CP027751.1\|AZE33431.1\|407024_407279_+\|Glutaredoxin-3-(Grx3)	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	1.27223e-49
CP027751.1\|AZE33443.1\|419130_420657_+\|3-hydroxyacyl-CoA-dehydrogenase-PaaC	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	0
CP027751.1\|AZE33429.1\|404928_406458_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
CP027751.1\|AZE33438.1\|412708_414121_-\|putative-MFS-type-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.428e-152
CP027751.1\|AZE33435.1\|409831_411268_-\|Nitrogen-regulation-protein-NtrC	gnl\|CDD\|273818	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I). This model represents NtrC, a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase, GlnA, and may be called GlnL, GlnG, etc. [Central intermediary metabolism, Nitrogen metabolism, Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	0
CP027751.1\|AZE33441.1\|417082_418270_+\|L-carnitine-dehydratase/bile-acid-inducible-protein-F	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	2.41457e-149
CP027751.1\|AZE33442.1\|418339_419134_+\|Enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|236162	PRK08138, PRK08138, enoyl-CoA hydratase; Provisional.	5.31143e-161
CP027751.1\|AZE33432.1\|407335_407818_+\|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	4.26189e-83
CP027751.1\|AZE33427.1\|402163_403474_-\|Carboxyl-terminal-protease	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.95839e-143

>CP027751.1|AZE33434.1|408492_408933_+|hypothetical-protein
MHGSEEKDRPHSTPEADVRPKLMLRVFGSLAIFGVMVGLMIGRLTTPDPTELQEVQVQPNALVVWFNNEPKVHGEHIDGAVALLFEAEGRAQKGQLKINDKDANWRVRTTEEGLLLNVVAARALHGEWSGSEVDGRWRLELQLREE
>CP027751.1|AZE33433.1|408038_408494_-|tRNA-(cytidine(34)-2'-O)-methyltransferase
MFHVILFQPEIPPNTGNVIRLCANSGCHLHLIEPLGFEMDDKRLRRAGLDYHEYATLQRHADLASCLESLGHPRLFAFTTKGSRPFHDASFAEGDAFLFGPESRGLPAEVLDALPAEQRLRLPMREGCRSLNLSNTVAVAVYEAWRQLGFK
>CP027751.1|AZE33432.1|407335_407818_+|Protein-export-protein-SecB-(maintains-pre-export-unfolded-state)
MTDQQNTAATEDESAPQFSLQRIYVRDLSFEAPKSPAIFRQQWEPSVGLDLNTRQKALEEGFHEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDDASMSHTLGAFCPNILFPYAREALDSLVTRGSFPALMLAPVNFDALYAQELQRLQAAGEGTVQ
>CP027751.1|AZE33431.1|407024_407279_+|Glutaredoxin-3-(Grx3)
MAAVVVYSSDYCPYCSRAKYLLENKGVAFEEIKVDGKPQVRAEMAQKAGRTSVPQIWIGSTHVGGCDDLFALERAGKLDALLAA
>CP027751.1|AZE33430.1|406609_407023_+|Rhodanese-related-sulfurtransferase-YibN
MVAHLIQFATEHYLLVGAFVILLALLIAHELSRGGRSLSTRELTALVNSEQGVVIDIRPSKDFAAGHIVGALNIPQDKLAARVGELEKHKAKTIILVDALGQHAGTHARELMKSGFTAAKLSGGVGSWKADNLPLVK
>CP027751.1|AZE33429.1|404928_406458_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTTTPKPLVLMILDGFGHSESHESNAIYAAKKPVLDRLYASVPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAADKAVHILGLLSDGGVHSHQDHLVAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGNGEFNAATAQEGLQAAYERGESDEFVKATTLGEPVKVEDGDAVVFMNFRADRARELSRVFVEDDFKEFARARQPKLAGFVMLTQYAASIPAPSAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDRIVDAIENQRYDVIVVNYANGDMVGHSGVFDAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQMSDAATGQAHTAHTSEPVPFIYVGKRNLKVREGGVLADVAPTMLKLLGLPQPAEMTGTSILV
>CP027751.1|AZE33428.1|403505_404792_-|Murein-hydrolase-activator-EnvC
MLRALITLALICLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKDLRGTETEMGKLEKQVDALQKELKKSESELQRLDEEKKKLQSARIEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKNFNETLRQLANVEKEISLQQAQLLVQKSSLDTQREELDKVRKERQVALAKLNDDVKARGDKLKAREQDQADLGKVLKTIEETLARQAREAEQARQKALIAQQEAEKKRLREAQASADDSPRKPPRAAPGPLVSSAGASYGGPFASSRGKLPWPVDGRLLARFGESRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQTLLKEAGDVVKAGESISTVGSSGGQGAPALYFAIRQQGRPSDPAQWCRAQG
>CP027751.1|AZE33427.1|402163_403474_-|Carboxyl-terminal-protease
MLHLSRLTSLALTIALVIGAPLAFAAETAQSTAATTTKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGIIKVVSPIDDTPASKAGIQAGDLIVKINGQPTRGQSMTEAVDKMRGKIGQKITLTLVRDGGAPFDVTLARATIQVKSVKSQLLESGYGYIRITQFQVKTGEEVSKALAKLRKDNGKKLNGIILDLRNNPGGVLQSAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKRAVLMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEAQDNEYFKEADLQGHLGNGNGGADKPTASGSKPKPMPQDDDYQLAQALSLLKGLSITRSK
>CP027751.1|AZE33426.1|401241_402000_-|Putative-periplasmic-protein-YibQ
MIGLLCLLAFTSTQAAEPAARKAYLSLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHAAEFAREAHRAGKIVILHMPMDPATGPFAWHPELPIEELERRLNAAFKAVPYTSGINNHMGSRMTSQPQAMSWLMAELQRRHKFFVDSRTSAKTVAAAEAQKIGLASVSRDVFLDDERTEDAISHQLQTAIDLARKQGSAVVIGHPYPQTLAVLERELPRLKAQGIDWIDIELMISVRSNRAMVGHGKDGVYR
>CP027751.1|AZE33425.1|400413_401169_+|ABC-type-amino-acid-transport/signal-transduction-system,-periplasmic-component/domain
MFKRLLLVLASASVLFAAGARAAQTPDTSLVLLTENFPPYNMARNGKNFAQGENINGIAVDIVREMFKRAGINYSLTLRFPWERIYKLALEQPGYGVFVTARLPDREPLFKWVGPIGPDDWILLARDDSKIALQSLEQARKYRIGAYKGDAIAETLAKQGLKPQVVLKDQDNARKLVGGQIDLWATGDPAGRYLARQEGVTGLKTVLRFHSTQLYLALNKEVPDETVARLQAALDQLREEGVVEEIMGRYL
>CP027751.1|AZE33435.1|409831_411268_-|Nitrogen-regulation-protein-NtrC
MSRSETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQGLEVIPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLNVIRIHIPRLSDRREDIPTLAKHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLENTCRWITVMASGREVHISDLPPELLSLPQDSAPVTNWEQALRQWADQALARGQSSLLDSAVPSFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGMKVDGGDDDDSDEG
>CP027751.1|AZE33436.1|411264_412350_-|Nitrogen-regulation-protein-NtrB
MTISDQLHRLLLDNLTTATILLNADLRLEYMNPAAEMLLAISGQRSHGQFISELFTESAEALSSLRQAVEQAHPFTKREAMLTALTGQTLTVDYAVTPILSNGDTLLLLEVHPRDRLLRITKEEAQLSKQETSKMLVRGLAHEIKNPLGGIRGAAQLLARELPDENLKDYTNVIIEEADRLRNLVDRMLGSNKLPSLAMCNVHEVLERVSSLVEAESQGCITLVRDYDPSIPDVLIDREQMIQAVLNIVRNAMQAISSQNELRLGRICLRTRTMRQFTIGHVRHRLVTKIEIIDNGPGIPAELQETIFFPMVSGRPDGTGLGLAITQNIISQHQGLIECDSHPGHTTFSIFLPLEQGAPST
>CP027751.1|AZE33437.1|412346_412658_-|hypothetical-protein
MRRKFSARRAAGHSLAQPRTNRTILVHQTAPSSIRSPFWFESTQRSRQNAAKENFKRPFQGSSASFRSLGLVFAFSRYQRLIRARNPGPARDCLVSKEVNIYP
>CP027751.1|AZE33438.1|412708_414121_-|putative-MFS-type-transporter
MNAAQHAAAHKKARKAGIASFIGTTIEWYDFYAYGIAAALVFGKVFFPADLPAGTATLLSFLTLWAGFIARPVGGIIFGHLGDKIGRKTTLVITLIMMGVATTCIGLLPSYLQIGIWAPIALVVLRIIQGIAVGGEWGGAILIASESAPKGKGILYAAFAQQGSPAGNLLATLVFFGLSALPAPDFLLWGWRIPFLLSAALVLVGMVIRLKLEESDDMKRLIQQKKTVKLPILEVLRNHWQIVLLGAGVLPIIHVTYFKSTFALSWATKELGYSQSTFLSVIVIALVVQFITQPLGALLVSRMDMRKAVVLMLLPEFLLMPAMFFAVETGIYWIAVLGMCLATVPHSMFYGAVGGILARAFPTKVRYSGLSISYQLCSLLVGGATPVLAQGILNNTGSIVGVAIASACYALVSLVCMLLLLKRIGHNAADLSTAEQADADELAREPRATPLIEDPATLPPSIDKDAQPAH
>CP027751.1|AZE33439.1|414316_415216_-|Transcriptional-regulator,-LysR-family
MDLKQLRYFVAVAEELHFGRAAARLFISQPALSFDIKKLESQLDVQLLTRNNKSVSLTNAGQVLLDEARYLLLRAEQARRLTLRSAQGFVGRLSIGFVNSILHRGLPQAVRTFEQDHPDTEIVLMEMNSAEQAQALQRGQIDIGFVHWSHFPESIRGEPVLAEPFLCCLPQGHRLAGESRIDLAQLANDDFILFPRNVSPHYHDLIIARCVAAGFSPRIRHETRLWQTVVAMVAYEMGVALVPQTLAGTWKEGVHYCEISGDGALSEIHAIRHADKPSAAAESFLTVLKALQKPVAPGL
>CP027751.1|AZE33440.1|415328_417050_+|Acyl-CoA-dehydrogenase
MTALPEPAQDTLNIPDSRGLNLFDCDAGLAALLKVYLPPQLFAQWLPTLRQLGGRAGGELDVLALSADKNPPQLRPRTRRGEDLQSIYKHPDFIALERAAYAELGLASMSHCPEPVLPLVKYALTFLFVQAEFGLCCPVSMTDSLTRTLRKFGSPELVARYLPSLASRDFDRLFQGAMFMTEQAAGSDVSRTETRARLENGEWRLFGDKWFCSNPDADLAMVLARPEDAPEGMKGVSLFLLPKLRPDGSRNAYRILRLKDKLGSRSMASGEISLDGATAYLIGEVGRGFQQMADMINMSRLSNGVRAAGLMRRGVNEALYVARHRRAFGRHLIEMPLMQRQLLKMMLPAEQARSMFMQIATLLPRADAGDEAARKCVRILTPLIKFRACRDARRVTGDAMEVRGGVGYIEEWSDARLVRDAHLGSIWEGTSNIVALDIARAVTREQALEPLRHYLAGLLAEADLPAASQRLFETVLQRAVAAIEKVAQERRDDQVRLAGSALYHTATAIFMAWEASRQAPDYRRLALAHLLLQHKLLPRDPLRPEPALEPELLALLANESPLSKADAMQLLPA
>CP027751.1|AZE33441.1|417082_418270_+|L-carnitine-dehydratase/bile-acid-inducible-protein-F
MNHAKGALAGLKVIDLSRVLGGPYCSQALADHGAEVIKLEPLSGDETRGWGPPFEGADASYFRGVNRNKQGIAVDLSRPAGITLLMRLLEDADVLIENFKPGTLERWGIGYAEVLSQRFPTLIHCAISGFGGDGPLGGLPGYDAVIQAMAGLMSVNGEAESGPLRIGLPIVDMVTGLNALAGILLALNERHRSGLGQSLDITLYDCGVSLLHPHLANYFAAGKTPLRTGNAHPNIAPYDSYRTGTEPIFLAVGNDRQFAKLCEQLDASALLDDPRFADNGRRSVNREALKQALEARLAEHDGTLLAQRLIRLGVPCGSIASIDKVVEHPHTRHRGLLVEIGDYRGVGSPVKLSRTPASYRSAPPALGANTREVLEGLGLDDQTIESLFEHGIVRE
>CP027751.1|AZE33442.1|418339_419134_+|Enoyl-CoA-hydratase/isomerase-family-protein
MSPESVSPQPQVLLEHPAPGVALLRLNRPQALNALNMALREELAEHFRRLDACPQTRVVVLTGGDTVFAAGADLGELVNASALQLYARHAERHWQAISACRKPVIAAVNGYALGGGCELAMHCDLIVAGHSARFAQPEIKVGVMPGAGGTQRLLRAVGKFQALRLLLTGCQVPADEALRLGLVSEVVADSETLPRALALATSIAGMPPLAVAQIKEVVLAGMDLPLEQALVLERKAFQLLFGSHDQREGMQAFLEKRKPEYQGK
>CP027751.1|AZE33443.1|419130_420657_+|3-hydroxyacyl-CoA-dehydrogenase-PaaC
MTAQPLQRIGLVGTGAMGRGIAQVMAMAGLKVFLFDARPGAAGTAREQLATIFAQQIEKARITPQDAAAAMLNLEVVDSLEALRDCQLVIEAIVENLEAKQQLFRQLEEVLAPSAILASNTSSLSITAIASVCRHPERVAGLHFFNPVPRMRIVEVVDGLATSVGARLQELVRAIGYYPARAKDSPGFIVNHAGRAFGTEALRILSEGVAPAWRIDALLRDSAGFAMGPFELLDLIGLDISVPVMESIYRQFYEEPRYRPHPVLRLMQAGGHLGRKSGQGFYLYDEPGDTRRPPQAVPHCAVLPPVWIVADDEVGRLRLLDLLERLGAKVENGLRPSTSALCLVAPLGDDATEAALRHATDPSRTVAIDTLTTLDSQRCLMLNPATREDMQHAAHALFSADGGTVTLIRDSCGFIVQRTLASIVNLACDIAQQGIASVADIDAAVRLGLGYPLGPLEWGDQLGPERLLQILERLHALTGDPRYRPSGWLRRRALLGLSLRQPENPLPA
>CP027751.1|AZE33444.1|420692_421895_+|Acetyl-CoA-acetyltransferase
MLDAYIYSGLRTPFGRHGGSLASVRPDDLVGPLLVRLLETSGLPVEALEEVILGCTNQAGEDSRNLARNALLSAGLPWRVPGQTVNRLCASGLSAVIDAARAITCGEGRLYLAGGVESMSRAPFIMAKAESAYSRTLDVADSTIGARFANPKLVERYGNHSMPETGDNLARRFAISREDADRFAAASQARYQEALLAGGLDDEIMAVEVPIGRKGQSLTVCDDEHPRPRSDLAALSRLPTLFAEGVVTAGNASGINDGAAVLLLGSREIGMEHGVAPMARILSSASVGVEPQFMGIGPHRAILLALQRARIGLEQLDLIEINEAFAPQVLACLKALNLDFDDPRVNPNGGAIAIGHPLGASGARLVLSACRTLQRNHQRYAVVSLCVGVGQGVAMVIERA

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Crispr_ID: CP027751_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027751_2

3142352-3142509

Orphan

Consensus_repeat	Method
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027751_2

>merge|CP027751|2|3142352-3142509|CRISPRCasFinder
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGCCTCGCTCCTACACAAGCATGTGCATTCTCTGTAGGCGCGAGGCTTGCCCACGATGGGGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGAGCAAGC

>CP027751|2|2|3142352-3142509|CRISPRCasFinder
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGGGCAAGC	CTCGCTCCTACACAAGCATGTGCATTCTCTGTAGGCGCGAGGCTTGCCCACGATGG
GGGCGCCGCGGTTTGTCTGGTGCTGCGCGTTATCGTTCATCGCGAGCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027751.1\|AZE35960.1\|3143944_3144874_-\|Copper-resistance-protein-B	unknown	unknown	gnl\|CDD\|377498
CP027751.1\|AZE35956.1\|3141338_3141776_-\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|224159
CP027751.1\|AZE35964.1\|3147809_3148340_+\|hypothetical-protein	unknown	unknown	unknown
CP027751.1\|AZE35962.1\|3146825_3147281_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176854
CP027751.1\|AZE35961.1\|3144870_3146703_-\|Multicopper-oxidase	unknown	unknown	gnl\|CDD\|273649
CP027751.1\|AZE35959.1\|3143503_3143887_-\|Copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
CP027751.1\|AZE35955.1\|3140179_3141205_-\|Hydrolase,-alpha/beta-fold-family	unknown	unknown	gnl\|CDD\|223669
CP027751.1\|AZE35958.1\|3142585_3143500_-\|Copper-resistance-protein-CopD	unknown	unknown	gnl\|CDD\|224195
CP027751.1\|AZE35949.1\|3130124_3130442_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378572
CP027751.1\|AZE35951.1\|3133246_3135340_-\|4-alpha-glucanotransferase-(amylomaltase)	unknown	unknown	gnl\|CDD\|237737
CP027751.1\|AZE35954.1\|3139203_3140157_-\|D-3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240646
CP027751.1\|AZE35965.1\|3148401_3149397_-\|Oxidoreductase,-aldo/keto-reductase-family	unknown	unknown	gnl\|CDD\|381302
CP027751.1\|AZE35957.1\|3141772_3142240_-\|CopG-protein	unknown	unknown	gnl\|CDD\|225564
CP027751.1\|AZE35966.1\|3149516_3150434_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
CP027751.1\|AZE35950.1\|3130463_3133250_-\|Malto-oligosyltrehalose-synthase	unknown	unknown	gnl\|CDD\|237740
CP027751.1\|AZE35953.1\|3137147_3138716_-\|Glycogen-synthase,-ADP-glucose-transglucosylase	unknown	unknown	gnl\|CDD\|234809
CP027751.1\|AZE35967.1\|3150526_3150658_-\|hypothetical-protein	unknown	unknown	unknown
CP027751.1\|AZE35952.1\|3135336_3137133_-\|Malto-oligosyltrehalose-trehalohydrolase	unknown	unknown	gnl\|CDD\|274114
CP027751.1\|AZE35948.1\|3127842_3130011_-\|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase	unknown	unknown	gnl\|CDD\|131155
CP027751.1\|AZE35963.1\|3147588_3147696_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP027751.1\|AZE35960.1\|3143944_3144874_-\|Copper-resistance-protein-B	gnl\|CDD\|377498	pfam05275, CopB, Copper resistance protein B precursor (CopB). This family consists of several bacterial copper resistance proteins. Copper is essential and serves as cofactor for more than 30 enzymes yet a surplus of copper is toxic and leads to radical formation and oxidation of biomolecules. Therefore, copper homeostasis is a key requisite for every organism. CopB serves to extrude copper when it approaches toxic levels.	3.0478e-123
CP027751.1\|AZE35956.1\|3141338_3141776_-\|putative-membrane-protein	gnl\|CDD\|224159	COG1238, COG1238, Predicted membrane protein [Function unknown].	1.86287e-36
CP027751.1\|AZE35962.1\|3146825_3147281_-\|hypothetical-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.72284e-14
CP027751.1\|AZE35961.1\|3144870_3146703_-\|Multicopper-oxidase	gnl\|CDD\|273649	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family. This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
CP027751.1\|AZE35959.1\|3143503_3143887_-\|Copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	2.84936e-24
CP027751.1\|AZE35955.1\|3140179_3141205_-\|Hydrolase,-alpha/beta-fold-family	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.34852e-27
CP027751.1\|AZE35958.1\|3142585_3143500_-\|Copper-resistance-protein-CopD	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	7.39954e-32
CP027751.1\|AZE35949.1\|3130124_3130442_-\|hypothetical-protein	gnl\|CDD\|378572	pfam11154, DUF2934, Protein of unknown function (DUF2934). This bacterial family of proteins has no known function.	3.69048e-11
CP027751.1\|AZE35951.1\|3133246_3135340_-\|4-alpha-glucanotransferase-(amylomaltase)	gnl\|CDD\|237737	PRK14507, PRK14507, malto-oligosyltrehalose synthase.	1.91035e-164
CP027751.1\|AZE35954.1\|3139203_3140157_-\|D-3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240646	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	2.59225e-176
CP027751.1\|AZE35965.1\|3148401_3149397_-\|Oxidoreductase,-aldo/keto-reductase-family	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	0
CP027751.1\|AZE35957.1\|3141772_3142240_-\|CopG-protein	gnl\|CDD\|225564	COG3019, COG3019, Predicted metal-binding protein [General function prediction only].	3.22302e-55
CP027751.1\|AZE35966.1\|3149516_3150434_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.7193e-97
CP027751.1\|AZE35950.1\|3130463_3133250_-\|Malto-oligosyltrehalose-synthase	gnl\|CDD\|237740	PRK14511, PRK14511, malto-oligosyltrehalose synthase.	0
CP027751.1\|AZE35953.1\|3137147_3138716_-\|Glycogen-synthase,-ADP-glucose-transglucosylase	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
CP027751.1\|AZE35952.1\|3135336_3137133_-\|Malto-oligosyltrehalose-trehalohydrolase	gnl\|CDD\|274114	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP027751.1\|AZE35948.1\|3127842_3130011_-\|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0

>CP027751.1|AZE35957.1|3141772_3142240_-|CopG-protein
MIKRLPMHNTLRLAALSALLVGSLAQAADLIPIDVHRDANCGCCKKWIEHLQANGFKVNDHVESNMSEVKQRLGVAPRLASCHTAVINGKFVEGHVPADQVLALSKRDDLLGVAAPGMPMGSPGMEMDGMPADAYQVIGLTKDGKDVVVADYPTH
>CP027751.1|AZE35956.1|3141338_3141776_-|putative-membrane-protein
MILTACLGLFLAAFGAATLLPLQSEAVLVGLLLNGQFNLWLLLAVATLGNVLGSLVNWWLGQRLERYKDRRWFPVGPRHLQTARNHYQRYGHWSLLLSWLPIIGDPLTLVAGVMGEPLKRFLLVVTLAKGARYGVLAWMTLGWVG
>CP027751.1|AZE35955.1|3140179_3141205_-|Hydrolase,-alpha/beta-fold-family
MSLSPTRWSLTRWLPALLLTAALPALAAQGPAYGPELQGFDYPYPLQHFAFESQGQALQMGYMDVPAKGTPNGRSVLLMHGKNFCGATWDSSIKALSDAGYRVIAADQIGFCTSSKPEHYQYSFQQLAQNTRQLLDRLGIQQISLLGHSTGGMLATRYALQYPEQVQQLALVNPIGLEDWKALGVPYRSVDQWYARELKLSAEGIRNYERSTYYGGRWKPEFERWVDMLAGLNQGPGHTRVAWNSALIYDMIFTQPVYYEFKDLKMPTLLLIGTADTTAIGSDIAPPAVKARIGNYQVLGKQVAGLIPHSTLIEFPGLGHAPQMEEPAQFHQALLGWLASH
>CP027751.1|AZE35954.1|3139203_3140157_-|D-3-phosphoglycerate-dehydrogenase
MSVQIAVIDDWQDVARDVVDWSLLSGIGQVSFIHDYPSDTVAMSERLAPFEVICVMRERSRFDAALLRSLPRLKLLLTGGMRNAAIDLAAAASLGIQVCGTDSYKHAAPELTWALIMAQTRNLLSEASALRAGLWQQGLGGDLHGKTLGILGLGSIGQRVAQFGQVFGMRVIAWSENLTAERAAAAGVTYVNKQQLFEQADVLSVHLVLSERSRGLVDAQALAWMKPSALLVNTARGPIVDEAALISALERGRLAGAALDVFEQEPLPLDHPLRRLPNVLATPHVGYVSQQNYRQFFTQMIEDIQAWAAGQPIRQLG
>CP027751.1|AZE35953.1|3137147_3138716_-|Glycogen-synthase,-ADP-glucose-transglucosylase
MTSAVLQTQGKHPLPLAGETASTSILAPGGKTSLPLIHHNPNRKKVLFVTSEIADLVKTGGLGDVSAALPRAMAHLHDVRLLIPGYRQVMHSENPIHIIGELGGHAALPACKIGRMDMPDGLVIYVLICPELYEREGTPYGANNGRDWPDNHIRFARLGLAAADIAANLAQIHWCPDLVHAHDWPAGLAPAYMHWRGQRTPTLFTIHNLAYQGVVSLASCPELGIPEHALQQEGMEFYGKLSFLKAGMAYASHITTVSATYAQEITTPAFGCGLDGFLASKTQQGLLSGIPNGIDESWDAATDPHLSTPFAIGDWQGKAANAAHVRRMFGLDPGSGPLFAVVSRLVYQKGLDLTEGVAEYIVKSGGQIAIIGRGEPEEEQAMRALAARFPGRIGVNIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGFLFDESTVASYEEALSRAFKVFAYPQLLNAMRCRAMAAPFNWCKAVEPYAELYEQLVAKALGKSAKP
>CP027751.1|AZE35952.1|3135336_3137133_-|Malto-oligosyltrehalose-trehalohydrolase
MPSRTLETWPHGTVPLDAQRTRFALWAPDAQHVSVELEHGVSLPMLPQANGWFMVVGHCPPGTRYRFNIDNEIRVPDPASRAQDGDVHGPSLVVDPRAYRWQHPHWQGRPWHQAVIYELHVGVLGGYREVEKHLPRLAQLGITAIELMPLAEFPGDRNWGYDGVLPYAPEASYGSPDDLKHLIDCAHGLDLAVMLDVVYNHFGPDGNYLQHYAKAFFREDRHTPWGAAIDFRRQPVRDFFIDNALMWLLEYRFDGLRLDAVHAIDDPDFLSELAQRVRQRIDPARQVWLTVENEYNQASLLEQHFDAQWNDDGHNALHVLLTGETDAYYADFAKRPTEKLARCLSQGFAYQGHVTRHGTARGEPSGHLPPSAFVLFLQNHDQIGNRAFGERLVRLAEPQALRAATVLLLLSPMIPLLFMGDELAAPQPFLFFTSHHGELADAVREGRRGEFAAFSAFADPHKREQIPDPNAPDTFLASRPQADPAQGEQTLALYRQLLQLRREHIVPYLPGAEALGAEVLAEGALCARWRLGNGQELRIDLNLSPHQVEQRPSNAAQRLFDYPAQAFERLQQGHLAPYSALVSLGAAAPLPDLDGERP
>CP027751.1|AZE35951.1|3133246_3135340_-|4-alpha-glucanotransferase-(amylomaltase)
MSDAQLEILASRAGLAVDWIDANGRPQRVEPRVLRSVLASLGHPADNDQQIEASLRQLLQVQQSRQLPPLLTADAGQGLDLGHYFAPDTPCEIRLEDGSVLNLKLDANSMLPGLVPVGYQEVSIAGQHFTLAVAPERCYSVADAVDQATPRAWGLSVQLYSLRRSGDGGYGDTGALEDLVRVAGERGAEAIAISPLHAMFSSDTGRYSPYSPSSRLFLNSLYAAPGTILGERAWRSAIDASGLGPQLQQLEQQPMVDWPVAAQARQKVLRALYEGFCQGEHPLHQDFASFRHASGEALENHCRFEAIQAQRAARGESLDWREWPDAWRTPRSPALAHFAVEHASDIGFYAFCQWLIARCLERVQSTARSSGMGIGLIADLAVGADGGGSQAWSRQDELLAALTVGAPPDILNRQGQGWGISAFSPEGLVRNGFHAFIEMLRANFAHAGGLRIDHVMGLQRLWVIPLGAPPCDGAYLYYPVDDLLRLLTLESHRHQAIVLGEDLGTVPDGLREKLSARAMLGMRVLLFEQEHGTHFRPILDWPDNALATTSTHDLPTLNGWWQGRDIDWSARLGLVDASGETHWREHRQREREGLRHALSRDPQNFREAPHIATHEADQVVDASVRFLGHTRAPLVLLPLEDALGIDEQANLPGTLDSHPNWRRRLAGSSAALLDDPDAARRLELLACARLQAHERDR
>CP027751.1|AZE35950.1|3130463_3133250_-|Malto-oligosyltrehalose-synthase
MNQATTRPVRATLRLQFHRGFSLDDAVPLVPYFARLGISHLYASPLLCARAGSMHGYDVVDPTRVNPELGGEAALERLVRSLRQHDMGLLLDIVSNHMAVGGADNPWWQDLLRWGRLSPYGEFFDIQWHSPDPLMEGQLLLPFLGSDYGVALQEGTLRLCFDAERGEFHVEHYQHHFPICPSDYGELLRVPGELDAESAERLKPLADAFSTLRYQPDAHTQAEPLQRQLQDAASAPQVRAAIEQQLAQYDARQPEGFARLHALLEQQSYRLASWRTAADDINWRRFFDINELGGLRVERPAVFEATHGKIFQLIAAGLVDGLRIDHIDGLADPRGYCRKLRRRVDALRPGQHLPIYVEKILGTGETLRRDWCVDGSTGYEFMNQLSLLQHDPQGAEPLAELWSRHSERPAAFLEEARLARQQLLNGSLASDFESVAQALLQVARNDVMSRDLTLGAIRRALQELIVHFPVYRTYIGACGRSAADEAFFQQALQGARDTLGEADWPVLAYLQQWLGGRGWRQLPPGRQRKVLKHACVRFQQLTSPTAAKAVEDTALYRSAVLLSRNDVGFSTEQFCAPVEAFHAVCRERLATFPDNLLASATHDHKRGEDARARLAVLSELSPWYVAQVEHWRRLAQALRSDPQAPGAGDELILYQALLGSWPLELHSDDSQGLRDYARRLWQWQEKALREAKLHSSWAAANEAYESAVHQFIERLLLSPEGLPLRSAIGAAVQRIAPAGALNGLAQSLLRMTVPGVPDLYQGNEFWDFSLVDPDNRRPVDFATRQQALDPCGETMELLANWRDGRIKQALIAATLERRGEYPQLFRRGTYQPLEVQGRHADKVLAFMREHQGQRAVVIVPRLVAGLLESGAHPRVDAPDWGDTRVHLPFAAPGQNLKGLFSTGAVTPHKDLMISSALRDFPVNLFIQT
>CP027751.1|AZE35949.1|3130124_3130442_-|hypothetical-protein
MSTDDKRIREFAYQIWESEGRPDGQEHRHWEMARKLAEAEALAPSKPPRATRAASAKPGKPAAKPKAVAKPAAAAPLVPPGEKVPPGGKSSTAKKPRAPRKPAAS
>CP027751.1|AZE35948.1|3127842_3130011_-|Limit-dextrin-alpha-1,6-maltotetraose-hydrolase
MTTSKTATTPKTSPATEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDATGEVELERIELPEYTDEIFHGYLPDAHPGLIYGYRVHGPYDPANGHRFNPNKLLIDPYAKQLVGELKWSEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGHDHRVSVPWDKTIIYETHVRGFTMRHPSVPEAVRGTFAGLMIDDVLEHIRKLGVSSVELLPIHAFVNDQHLLHKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAGLELILDVVYNHTAEGNEQGPTLSMRGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLIAEPWDIGPGGYQVGGFPPGWVEWNDKFRDTVRAFWKGDDGQLADFAARMTASGEMFNQRGRRPYTSVNFVTAHDGFTLHDLVSYNDKHNEANDEDNQDGSNHNLSWNHGVEGPTDDPQINALRLRQMRNFFATLLLAQGTPMLVAGDEFARTQHGNNNAYCQDSEIGWVNWDLDDDGKSLLKFVKRLVKLRMAYPILRRGRFLVGNYNEDIGVKDVTWLAPDASEMTTEQWQDSHGRCLGMLLDGRAQETGIRRPGADATLLLVVNAHHDIVNFCLPEVPDGGFWTCMLDTNQPSVKGQERFEFGHQYSVTGRSLLLFELQHEGED
>CP027751.1|AZE35958.1|3142585_3143500_-|Copper-resistance-protein-CopD
MGELINVALRFALYLDLMLLFGLALFGLYGLRGAQSRRRFRRPLATTLVLGALLSGAALLQLVLSMSGATRLAELDPALVPVLVLETDVGQSWLLRLAALLLAGVLLLFSSGWSRFTLYGLILCTATALASLAWGGHGAMSEGGQRYLHLGSDILHLLGAGAWLGALAAFALLLRRGACEGEQQAGHLLDALKGFASLGTLIVVSLSLSGVLNYLLIVGPDLATLSASTYGLLLSLKVAVFASMLVFAALNRFHLVPQLEQALHRASPQAALPALRRSMLLELAAALLIVGLVAMLGILSPAPE
>CP027751.1|AZE35959.1|3143503_3143887_-|Copper-resistance-protein-CopC
MSYLKHLAIAVTFGAGLTLAGVAQAHPKLLASTPAEGAKGAAPAKIELQFSEPLTTKFSGARLLMTGMPGMSHAPMPVKASVAGGSDPKSMIISPATPLPKGSYKVEWRAVSADTHPITGNLTFEVN
>CP027751.1|AZE35960.1|3143944_3144874_-|Copper-resistance-protein-B
MMPKNALTLFAALLGLSAGPLQAAESMDHSSMDHSSMPASSMPGNPMPGMDHSQMTGMDGKPLQTMEPAAPTQSRTPIPVLTDADRRAAFPPMAGHGVHDKAINSLWLVDRLEYQDADDGSALAWEMNGWIGGDIDRLWLRSEGERTNGRTENAQVEALWGHAIGPWWDVVSGVRQDFKPGAPQTWAALGLQGMALYNFESQATAYLGEGGQSALGLQAEYDILLTNRLILQPNAEVSLYGKNDPQRGIGSGLSSLEAGLRLRYELHRQFAPYVGVTWSRSYGKTADYAREEGEDSSEARLVLGVRLWF
>CP027751.1|AZE35961.1|3144870_3146703_-|Multicopper-oxidase
MHVKPTRRSFIKGLAAGGVLAGTGLWQQPLWARSEDGQLPALSGQQFDLFIGESQVNYSGTSRTAMTINGGLPGPLLRWREGDTVTIRVRNRLKEDTSIHWHGLILPANMDGVPGLSFHGIAPDGLYEYRFKVRQNGTYWYHSHSGLQEQAGVYGPLVIEAREPEPFQYDRDYVVMLSDWSDEAPERLMHILKKQPGYYNFHKRTVGDFIEDVSRDGWAATLADRKMWAQMKMTPTDLADVSGYTYTYLINGQSPGGNWTGLFKPGEKLRLRLINGSAMSYFDLRIPGLKMTVVAADGQYVQPVSVDELRIAVAETYDVLVEPGSQEAYTLFAQAMDRSGYARGTLSQRPGLSATVPPLDPRPLISMADMGMDHGSMAGMDMGAMPGMDHGQMQGMDHSQMQGMDSSNMAGMDHSGMAGMSGMDHGAMGGAMQSHPASEDGNPLVDMQTMSPTPKLADPGIGLRNNGRRVLTYADLRSTFEDPDGREPSRTIELHLTGHMEKFSWSFDGIKFSDAEPLRLTYGERVRITLVNDTMMTHPIHLHGMWSDLEDEQGRFLVRKHTIDMPPGSKRSYRVTADALGRWAYHCHLLFHMEMGMFREVRVDEAGSAA
>CP027751.1|AZE35962.1|3146825_3147281_-|hypothetical-protein
MEQRQQHLLDELIFHELYIDAPIDTVYYYVTQPDRWHEWHPASLRADTGLAGSLPAGHRFSKTIDLLGLQIHMSCRVLVAVFPKEFKIVFSSPPADGSIHYQLCKYGDGTLFKRTLHYCSDLNLVSLRPRIEHLSQLAMVNLKRNLEKIAH
>CP027751.1|AZE35963.1|3147588_3147696_-|hypothetical-protein
MPVSIGAPEHLSNKYFGFLQFLYISDTNAWKPRFC
>CP027751.1|AZE35964.1|3147809_3148340_+|hypothetical-protein
MTIGYVGGWTSKAGLLVQDTGTRGKPVSQSVKVKQMLALVGQNPLALNVFKMDEMKLHKQIKGFDPENISAKQLGNMSTFLKQKGLISDVTAMTLLNAGDKFDRFGVQSDPDAKFNALEYFAIQLDNIQTNNLKGNKYASYLIPEYKKAIYVLQNLQSYGKGNGTTVTDKNHSAKA
>CP027751.1|AZE35965.1|3148401_3149397_-|Oxidoreductase,-aldo/keto-reductase-family
MQTRQLGKNGPQVSAIGLGCMGMTDFYTTGTDTREATATLHRALELGINLLDTADMYGPHSNEILIGQAIRGKRDQVFLASKFGIVRDPGDPAARGVNGRPDYIRQAIDGTLQRLGVETLDLYYQHRIDPDVAIEETVGAMAELVQAGKVRYLGLSEASAATLERAHKVHPISALQSEYSLWSRDQEDNGCLAACQRLGIAFVPYSPLGRGFLTGALKSPEDFAADDYRRFSPRFQGENFTKNLLLVEQVKQLAVAKGITTGQLALAWVLAQGDYLIPIPGTKQRKYLEENVAALQVHLSADELLALERIFSPDATAGERYPQAVMALLDR
>CP027751.1|AZE35966.1|3149516_3150434_+|LysR-family-transcriptional-regulator
MDRFNAMRVFTRIVDLGGFAKAADSLQMPRASVTVLIKQLEAHLGVQLLLRTTRQVTPTLDGAAYYQRCVRLLADLEETEAVFSVARHNPRGTLRIDMPAGIGRLVVIPALPAFSERYPLIDLEIGLNDRPVDLIREGVDCVLRGGLCLDDSLVARPLLALEQVTCASPAYLRQRGVPQSLDDLAGHQMIEYFSSVSGKRYGLEFEVQGQVLLPELPKQVSVNSADGYLAACEAGYGLVQTPYYHVAQQLAEGRLIEVLRHIPPPRMPLSALYPPHRHLSTRVRVFVDWLVELFAQLGIHNTRLA
>CP027751.1|AZE35967.1|3150526_3150658_-|hypothetical-protein
MFRRITWLIPLLAMLTLSGCIIFPHDGWHHRHYDGGPGYHYPR

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Crispr_ID: CP027751_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027751_3

5440287-5440438

Orphan

Consensus_repeat	Method
CCAAGGCCACCACGGACCTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027751_3

>merge|CP027751|3|5440287-5440438|CRISPRCasFinder
CCAAGGCCACCACGGACCTGTAGGAGCGAGGCTTGCCCGCGATAGCGGTACCTCAGACACACCGCATAGCCCCAATCGCCGGCAAGCCTGGCTCCTACAGAAGCCAAGGCCACCACGGACTTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT

>CP027751|3|3|5440287-5440438|CRISPRCasFinder
CCAAGGCCACCACGGACCTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT	ACCTCAGACACACCGCATAGCCCCAATCGCCGGCAAGCCTGGCTCCTACAGAAG
CCAAGGCCACCACGGACTTGTAGGAGCGAGGCTTGCCCGCGATAGCGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP027751.1\|AZE38037.1\|5447985_5449605_+\|Ferredoxin-dependent-glutamate-synthase	unknown	unknown	gnl\|CDD\|239202
CP027751.1\|AZE38030.1\|5441900_5444213_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	unknown	unknown	gnl\|CDD\|235367
CP027751.1\|AZE38019.1\|5429622_5429997_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	unknown	unknown	gnl\|CDD\|235094
CP027751.1\|AZE38020.1\|5430029_5430428_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	unknown	unknown	gnl\|CDD\|185011
CP027751.1\|AZE38023.1\|5432961_5433681_+\|2-hydroxy-3-keto-5-methylthiopentenyl-1--phosphate-phosphatase	unknown	unknown	gnl\|CDD\|319826
CP027751.1\|AZE38024.1\|5433673_5435068_+\|Aminotransferase,-class-III	unknown	unknown	gnl\|CDD\|223238
CP027751.1\|AZE38033.1\|5445821_5446460_-\|Putative-threonine-efflux-protein	unknown	unknown	gnl\|CDD\|224199
CP027751.1\|AZE38036.1\|5447703_5447856_+\|transcriptional-regulator,-LuxR-family	unknown	unknown	gnl\|CDD\|225107
CP027751.1\|AZE38025.1\|5435064_5435946_+\|putative-esterase	unknown	unknown	gnl\|CDD\|224561
CP027751.1\|AZE38038.1\|5449673_5449958_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224278
CP027751.1\|AZE38034.1\|5446487_5446922_-\|Nudix-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|240046
CP027751.1\|AZE38029.1\|5440498_5441533_-\|Hydrolase,-alpha/beta-fold-family	unknown	unknown	gnl\|CDD\|223669
CP027751.1\|AZE38021.1\|5430557_5431424_-\|fatty-acid-desaturase,-putative	unknown	unknown	gnl\|CDD\|366126
CP027751.1\|AZE38035.1\|5447158_5447431_-\|LSU-ribosomal-protein-L31p	unknown	unknown	gnl\|CDD\|234969
CP027751.1\|AZE38032.1\|5445272_5445782_-\|Acetyltransferase,-GNAT-family	unknown	unknown	gnl\|CDD\|366181
CP027751.1\|AZE38027.1\|5437084_5438872_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236901
CP027751.1\|AZE38031.1\|5444321_5445239_+\|Transcriptional-activator-MetR	unknown	unknown	gnl\|CDD\|176132
CP027751.1\|AZE38028.1\|5438868_5440266_+\|Two-component,-Sigma-54-Specific,-central-transcriptional-regulator-of-acidic-amino-acid-uptake	unknown	unknown	gnl\|CDD\|225114
CP027751.1\|AZE38026.1\|5435960_5437088_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379214
CP027751.1\|AZE38022.1\|5431948_5432731_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377682

Protein	Function_ID	Function_description	E-value
CP027751.1\|AZE38037.1\|5447985_5449605_+\|Ferredoxin-dependent-glutamate-synthase	gnl\|CDD\|239202	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant, yeast and bacterial pathway for ammonia assimilation. It is a multifunctional enzyme that functions through three distinct active centers, carrying out L-glutamine hydrolysis, conversion of 2-oxoglutarate into L-glutamate, and electron uptake from an electron donor.	7.98097e-178
CP027751.1\|AZE38030.1\|5441900_5444213_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
CP027751.1\|AZE38019.1\|5429622_5429997_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	gnl\|CDD\|235094	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional.	2.47159e-06
CP027751.1\|AZE38020.1\|5430029_5430428_+\|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily	gnl\|CDD\|185011	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional.	9.62894e-08
CP027751.1\|AZE38023.1\|5432961_5433681_+\|2-hydroxy-3-keto-5-methylthiopentenyl-1--phosphate-phosphatase	gnl\|CDD\|319826	cd07524, HAD_Pase, phosphatase, similar to Bacillus subtilis MtnX; belongs to the haloacid dehalogenase-like superfamily. Bacillus subtilis recycles two toxic byproducts of polyamine metabolism, methylthioadenosine and methylthioribose, into methionine by a salvage pathway. The sixth reaction in this pathway is catalyzed by B. subtilis MtnX: the dephosphorylation of 2- hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HKMTP- 1-P) into 1,2-dihydroxy-3-keto-5-methylthiopentene. The hydrolysis of HK-MTP-1-P is a two-step mechanism involving the formation of a transiently phosphorylated aspartyl intermediate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.55453e-32
CP027751.1\|AZE38024.1\|5433673_5435068_+\|Aminotransferase,-class-III	gnl\|CDD\|223238	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].	3.22268e-107
CP027751.1\|AZE38033.1\|5445821_5446460_-\|Putative-threonine-efflux-protein	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	5.54499e-47
CP027751.1\|AZE38036.1\|5447703_5447856_+\|transcriptional-regulator,-LuxR-family	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.97074e-12
CP027751.1\|AZE38025.1\|5435064_5435946_+\|putative-esterase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	6.89738e-21
CP027751.1\|AZE38038.1\|5449673_5449958_+\|hypothetical-protein	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	1.02503e-26
CP027751.1\|AZE38034.1\|5446487_5446922_-\|Nudix-hydrolase-family-protein	gnl\|CDD\|240046	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	4.16719e-48
CP027751.1\|AZE38029.1\|5440498_5441533_-\|Hydrolase,-alpha/beta-fold-family	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.89945e-25
CP027751.1\|AZE38021.1\|5430557_5431424_-\|fatty-acid-desaturase,-putative	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	3.0259e-19
CP027751.1\|AZE38035.1\|5447158_5447431_-\|LSU-ribosomal-protein-L31p	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	2.29455e-47
CP027751.1\|AZE38032.1\|5445272_5445782_-\|Acetyltransferase,-GNAT-family	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.25779e-15
CP027751.1\|AZE38027.1\|5437084_5438872_+\|hypothetical-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	2.08726e-53
CP027751.1\|AZE38031.1\|5444321_5445239_+\|Transcriptional-activator-MetR	gnl\|CDD\|176132	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold. MetR, a member of the LysR family, is a positive regulator for the metA, metE, metF, and metH genes. The sulfur-containing amino acid methionine is the universal initiator of protein synthesis in all known organisms and its derivative S-adenosylmethionine (SAM) and autoinducer-2 (AI-2) are involved in various cellular processes. SAM plays a central role as methyl donor in methylation reactions, which are essential for the biosynthesis of phospholipids, proteins, DNA and RNA. The interspecies signaling molecule AI-2 is involved in cell-cell communication process (quorum sensing) and gene regulation in bacteria. Although methionine biosynthetic enzymes and metabolic pathways are well conserved in bacteria, the regulation of methionine biosynthesis involves various regulatory mechanisms. In Escherichia coli and Salmonella enterica serovar Typhimurium, MetJ and MetR regulate the expression of methionine biosynthetic genes. The MetJ repressor negatively regulates the E. coli met genes, except for metH. Several of these genes are also under the positive control of MetR with homocysteine as a co-inducer. In Bacillus subtilis, the met genes are controlled by S-box termination-antitermination system. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.93436e-124
CP027751.1\|AZE38028.1\|5438868_5440266_+\|Two-component,-Sigma-54-Specific,-central-transcriptional-regulator-of-acidic-amino-acid-uptake	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
CP027751.1\|AZE38026.1\|5435960_5437088_+\|hypothetical-protein	gnl\|CDD\|379214	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions.	5.70681e-06
CP027751.1\|AZE38022.1\|5431948_5432731_-\|hypothetical-protein	gnl\|CDD\|377682	pfam06629, MipA, MltA-interacting protein MipA. This family consists of several bacterial MltA-interacting protein (MipA) like sequences. As well as interacting with the membrane-bound lytic transglycosylase MltA, MipA is known to bind to PBP1B, a bifunctional murein transglycosylase/transpeptidase. MipA is considered to be a structural protein mediating the assembly of MltA to PBP1B into a complex.	5.02608e-32

>CP027751.1|AZE38028.1|5438868_5440266_+|Two-component,-Sigma-54-Specific,-central-transcriptional-regulator-of-acidic-amino-acid-uptake
MTHNLLVVDDEPKLCDLLSSALSQDGIQVFTAGNGLHALKVLEQEEIDLVISDWRMPGMDGPQLLAEVKQRYPQIPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVSKALQFRDILKDNQRMRAELDEHRQIDSLVGDSPTFRRVLQAVDSVRESNATILLTGESGTGKEMVARAIHQHGNRANKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPALRERVEDIAPLARHFAHTLGATAGKRITGFSPQALQAMANYAWPGNIRELQNCVERATIVAAGAVIEESDLPGYLFSSPPLNAGASALPGDSLSVPSDLDAALAEVEKAYILAALQQSNGVQAAAAQLIGISERSFWYRLKKLGIQVDKIVR
>CP027751.1|AZE38027.1|5437084_5438872_+|hypothetical-protein
MTRKDLRTPRPFAISRWSLQRKLVLAFWMVSVIPTMIAAELAATTLSQIFDSNVRIWLQESTKIVEDEITETLRDNARIAQLFLRYARPPTDRNAAKHDKLTADIADSMGIDVVALIRKRDHQVVFSTAADDIVGQISLAHNAVLQTLQVGGVATGAVVSTFQTTLDGIDYQLLIATYLDASFLTSVADVHSLDLRLYLAKANDFAEIFATQRFEDHPTQVPEKIENILRDTRQPTEQFTSRYSGLYRPIFNDSGELVGVIFSGLLRHSSLVGLVNQSNLFILIFLLSSAASLAVGWLVSKRLTMPLRGLSKGVQAVIAGDYRQRVPVIGGDELAELSSTFNHMSERLGELQHLEAQLRRRDRLHALGEVAMGLAHEIRNPLGIIKTATQLLHRRADLPEGDKRHLEYVISEVSRINDLITDFLDFAKPSAPIRSTLLARPLVEELIGFCEPELASHKIDAQIDDQAPGATLYADARQLKQACLNLILNAIDAMPAGGRLTLGIAQDAEHTILRVTDTGQGIEPDMLERIFTPFVTTKASGTGLGLAKVFSIMENHDGHIECSSEIDAGATFSLYIPAKGEDDEEDDENEQKAQP
>CP027751.1|AZE38026.1|5435960_5437088_+|hypothetical-protein
MITSQVFSSIQAIDRSAWNDCFPGALENWDYYLAVQDAGIEDFTWRYLAVFEDEKLVAAAPAFITRYRLDTTVSGPAKRLSERLQRWWPGLLQLPLYAIGSPVAEQCHAGTASHIPAVRRQTLLGQLLHLARRDADAQGIGLLAVKDAASQDRQWAASCQAFGLQAMPSLPSALLPVPFGSQDAYLGTLGKSTRKDLRRKLRAPGPRIEWRRNIDDVLPQVMRLYEATLRRSDLQFERLPAPYFTGILQHLGERAACVLYWVDQQLVAFNLVLLDEHRLIDKFFAHDLEISREHNLYLRSWMANVDYCIQHRIALYECGQAGYASKLRLGCSFTGNSLFFQHRNPLLDTLLKGLKYVLRPDRTDPAMAAALSESS
>CP027751.1|AZE38025.1|5435064_5435946_+|putative-esterase
MTAQIDPGAGIDLGQGDAGFILGNGEVAVLLIHGLTGTPTELRRVAVGLAQAGCTVYVPTLAGHCGNNADLQATGWQDWYEGVRRTFVGIRQRHRQVFVGGLSMGAVMSMYLASEHPGQVSGLLMYSTTLKYDGWSINKLAFLTPLLMKIPFGVHICSFEEKPPYGIKNKRLRAVVERQMKAGESSSAGLLTMEGVTVRELHRMNAVVKKRMPSITTPALVLHSIEDDITSRWNADYVERKLGGPVVKVLLDNCYHMITVDLQYRRVVELSADFIERQAGPRPAVYDDQRQFA
>CP027751.1|AZE38024.1|5433673_5435068_+|Aminotransferase,-class-III
MSDIRIATAEDQVLLEKEAKYCSYGDTVHYIEPPRIFSRCEGSYVWDTSDQAYLDLQMWYSAVNFGYANPRLNNALKQQIDTLPQIASQYLHKGKIELSEMIAVDAKKKFGLDGRVHFNVGGSQSIEDSLKVVRNATHGKSLMFAFEGGYHGRTLGASSITSSYRYRRRYGHFGERANFIPFPYHFRGPKGMTKEEYGSHCVQQFARLFETEYNGVWDPKVGQSEYAAFYVEPIQGTGGYVIPPMNFYSELKHVLDQHGILMVVDEIQMGFYRTGKLWSIEHFDVKPDVIVFGKALTNGLNPLGGIWAREELINPKVFPPGSTHSTFASNPLGTAVGLEMFKMTSEIDYGAMVMEKGKYFLAGLQDLQKRYPIIGDVDGLGLALRCEICTTDGFTPDKATLDYMVEEGMKGDIEINGQRLGLILDVGGYYKNVITLAPSLEISYAEIDLGIALLDRLLDRAMKR
>CP027751.1|AZE38023.1|5432961_5433681_+|2-hydroxy-3-keto-5-methylthiopentenyl-1--phosphate-phosphatase
MMHWHIVCDFDGTITRTDVIDNVLQRFADPSWEDIEQQWLDGHIGSRECLSRQLALVKASPAELLACFDSVEIDPDFPDFVDHVIGLGASLEVVSDGIEQGIARILARHYVSLLPILANRLRQVDQNSWRIDFPHASDACRAASGNCKCKSTPKGKRVLVIGDGQSDMCVAASADFVFAKGRLAEYCQRNAIPHATFDSFAELPALLALLPNEAANAGAFALDNTTEHCVPTQELFHHV
>CP027751.1|AZE38022.1|5431948_5432731_-|hypothetical-protein
MFSFTRSALLAVLLSLGAACGAFAEEGGQDGLSGSLGLGIGYQPHDPSGSRHDTVPLPYVDLEWGDVSLDTDDGLTWDAFKGNGFSAGPYINYLPGRNANGSLRGLRDVPNMADVGGYIQYAPDDFWRLFASIGSAVAAGEGQGGLLGKVGGEIGYPLGLGIIGSNNLTAHFADARQTQTFFGISDAEAQATGIGRYSAGGGLQNLTLTQNLQVPLGGNWSWMTSASWIHLTGSAADSTLVRERGEVNQGQVQTALSYQF
>CP027751.1|AZE38021.1|5430557_5431424_-|fatty-acid-desaturase,-putative
MARPAYRLLAHSLWDIVPILMALAHFSFVLWLVLAFHSLSWWVILPAALLYAVSLSWSINSISHNQIHNAYFSLPWLNRAFDLLLSVTIGFSQTLYRDIHNRHHRGNSDRPGADGTTVDPLSIYLHGRNGQPDNVWAYTFLSFFRDDPKAIYQEMQRKRPADARWVKVEIGVTVLAYVALALYDWHALLVLLPFWYLGQSLSSLNGYYEHLGGNPDLPIAWGVSSYSRLYNLIWMNNGYHAEHHYRPKMHWTRVKAFHREIREQQRAAGVKVIPLAHGLGFLLKHPKP
>CP027751.1|AZE38020.1|5430029_5430428_+|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily
MTAQTHGWLHGRLGTLVLWALLIGFESAGQIATKVGGDQLGQMDFNLQWLAAVAVNPGVLLAIACYIGAFFVWMLILRRSSLSLAFPLSSLVFVVVLLGSWLGLGEQISLLHWVGVLVIIGGIALLAEGEEA
>CP027751.1|AZE38019.1|5429622_5429997_+|Permease-of-the-drug/metabolite-transporter-(DMT)-superfamily
MTLTVILLVAFSIVLDVIGQLCFKLGLDRLPELEGGFRLNAFWGQVFNAPLLWCGIGAYVIEFFVWLEALSRAPLSLLFPAAALAYCGVVLAGKLILGENVSRRRWLGTLVITLGVMLVCVAST
>CP027751.1|AZE38029.1|5440498_5441533_-|Hydrolase,-alpha/beta-fold-family
MWARFFSTTVFLAALLLGLPSQAASRCDVNVPTQRVELEQVSLAYQSIGRASDPALLLVMGLGGQLIHWPDEVVVALCQQGFRVIRYDNRDVGLSTWRQAPANANLTFEVLRYKLGLPVAAPYSLTDMADDALGLMNALQVEQFHVLGASMGGMIAQHLAAMAPQRVESLTLIMTSSGAEGLPAPNAALVQLLSRRGAPNREVALEQQADLLAALGSPQVTDDRQALLHQAAEAYDRAFNPEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIQGSQLKLIPGLAHRFQEAFKAPLLAAVLPYLQSHREDTSHWAQIDPLPAPNLL
>CP027751.1|AZE38030.1|5441900_5444213_-|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase
MALAHTLGFPRIGADRELKKALEAYWKGDLDWQALQDVGRQLRARHWQLQKDAGIDLLPVGDFAWYDQVLTHSLAFGVVPERFDSSKDAQGRPTLDTLFAMARGASAGCCGGDQAKTQYAQELTKWFDTNYHYLVPEFSADQSFKLSWEQLFDEVDEAHALGHRVKPVIIGPLTYLWLGKAKGNDFDKLELLERLLPVYGEILNRLKAQGVEWVQIDEPILTLDLPQAWKGAFERAYHILQYSPLKKLVATYFSGLQDNLGLAVGLPVDGLHIDAVRAPEQLTQVLDRLPTYKILSVGLVNGRNVWRCELEQALQQLQAAQERFGDNLWVSSSCSLLHSPVDLAREDQLDAELKSWLAFAVQKCGEISVLRDALNDPQAPAVQAALAASRQVQASRAQSPRIHKAEVQARLKAVSAADSQRHSPFAQRIAQQHARLKLPVFPTTTIGSFPQTASIRLARQAFKQGKLSNNDYTDAMRCEIRHAVQVQERLGLDVLVHGEAERNDMVEYFAEQLDGYLFTRFGWVQSYGSRCVKPAVIYGDLSRPQAMTVDWISYAQSLTDKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALALRDEVVDLEKAGIKIVQIDEAAFREGLPLRRADWQPYLDWAVEAFRLTASGVRDDTQIHTHMCYSEFNDVIQAIAAMDADVITIETSRSDMELLEAFEAFDYPNDIGPGVYDIHSPRVPDTAEMVKLMSKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARQLRNQQA
>CP027751.1|AZE38031.1|5444321_5445239_+|Transcriptional-activator-MetR
MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERMGMPLFVRKTKPVRFTSAGLRLLQLADATLPLLRAAERDISRLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPEVELDLASGFSFAPLPALARGDLDLVVTSDPVELAGITYVPLFTYEAMLAVANQHRLASKPYIVPEDLLSETLITYPVERDRLDIFTRFLEPADIEPAQVRTSELTVMMMQLVASGRGVCGMPHWALHEYSSRGYVKAKRLGEKGLFATLYAAIRADMLDAPYMRDFLLTAKDTSFSTLDGVSAVR
>CP027751.1|AZE38032.1|5445272_5445782_-|Acetyltransferase,-GNAT-family
MSIQHLDASHAAAYRALMLEAYERHPQAFTSSVAERAAMPLSWWESRLSSPLDLLLGAFEGGELVGIVGLAFEVREKARHKATLFGLYVAQPYRHGGLGYRLVQALLQEARQRPGVRLVQLTVTAGNDAALALYQRCGFVQFGLEPLAVRVGVEYFDKLHLWREVVSPL
>CP027751.1|AZE38033.1|5445821_5446460_-|Putative-threonine-efflux-protein
MIPLHDMLIFIAAALLMVLTPGPNMIYLISRSICQGRRAGVTSLVGVVAGFFVHLFAAAIGLTAVFMAVPVAYEVLKWVGALYLMWLAWQALKPGARSPFEAQQLPPDSSRKLILMGFLTSALNPKIAVFYLSVFPQFISPEHGSVFTQSIILGLTQISVSFSVNLLIALFASGIAAWFVHNPLWLATQRYFMGFVLAGLAVRLLLEQRQTA
>CP027751.1|AZE38034.1|5446487_5446922_-|Nudix-hydrolase-family-protein
MTLSSATSPLIRIAAALLIGPDGRTLLVRKRGTQAFMQPGGKIEPSELPAQALARELEEELGLRIDPADARYLGRFCAPAANEPGFVVEAELFRLDLDTDEVRPAAEIEEVRWIDPEAGDELTLAPLTRDLILPFYRASQLASA
>CP027751.1|AZE38035.1|5447158_5447431_-|LSU-ribosomal-protein-L31p
MKANIHPAYRTVLFHDTAADVYFLIGSTVDTDRTQRHSDGNTYPYVALDVSSASHPVYTGQQRKTQSEGRIAGFNKRFASFGSSGKTGNA
>CP027751.1|AZE38036.1|5447703_5447856_+|transcriptional-regulator,-LuxR-family
MLSGCSGKEIARKLQTSAETVKVHKKHIYDKLGIKSRSELFLIFLQAQNA
>CP027751.1|AZE38037.1|5447985_5449605_+|Ferredoxin-dependent-glutamate-synthase
MSLSLLSRYAFFAACVIFTLASLPFLEHDWLWPFTLVTFLLSLLGIFDLLQSPHAVRRNYPILGNIRYLVEGIRPEIRQYLLESDSDALPFSRAQRSLVYSRAKNESADKPFGTLIDVYQSGFEFIGHSMRPAPLSDPSTFRVTVGGPQCKQPYSASVFNISAMSFGSLSANAIRALNQGAKLGNFAHDTGEGSISPYHRENGGDLTWELGSGYFGCRTSDGRFDPERFAQQAQNPQVRMIEIKMSQGAKPGHGGILPKHKVTQEIADTRGIRMGEDCISPSSHSAFSTPIEMMHFIQQLRELSGGKPVGFKFCLGHPWEFMGIAKAMLETGILPDFIVVDGKEGGTGAAPVEFTDHIGAPMREGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDIASVLAIGADWANSARGFMFAIGCIQSQSCHTNKCPTGVATQDNLRQRALVVPDKAQRVFSFHRNTLKALAEMLAAAGLNHPSQLEARHLVRRMSATEIKLFSQLHVFLKPGELLTGAVTGEFYSRMWQLARADSFEPNSEAAA
>CP027751.1|AZE38038.1|5449673_5449958_+|hypothetical-protein
MLKVIAEDFIKPEHLDTVRPWYAELLEKTRQEPDCIAYDLFVDQQDPGHFIFIEQWPDRAALKAHCQTEHFTRLVPQINAFQARECRVLLMDEF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1310451 : 1401287

Pseudomonas_phage(42.31%)

protease,plate,tail,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE34249.1\|1310451_1311804_+\|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	NA	NA	NA	NA
AZE34250.1\|1311878_1314266_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA
AZE34251.1\|1314311_1314815_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA
AZE34252.1\|1314818_1315874_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA
AZE34253.1\|1315983_1316424_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZE34254.1\|1316420_1317197_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZE34255.1\|1317199_1318330_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA
AZE34256.1\|1318341_1318974_+	Ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.7e-27	38.9
AZE34257.1\|1319043_1322568_+	DNA polymerase III alpha subunit	A0A2L1IZ23	Streptomyces_phage	1.4e-195	38.0
AZE34258.1\|1322708_1323656_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA
AZE34259.1\|1323775_1325104_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
AZE34260.1\|1325149_1325293_+	hypothetical protein	NA	NA	NA	NA
AZE34261.1\|1325378_1327010_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.9e-158	53.5
AZE34262.1\|1327015_1327861_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	E3T537	Cafeteria_roenbergensis_virus	9.4e-50	42.8
AZE34263.1\|1328018_1329308_+	Enolase	A0A1X9I5Z8	Streptococcus_phage	9.0e-137	59.2
AZE34264.1\|1329480_1329759_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA
AZE34265.1\|1329755_1330463_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZE34266.1\|1330632_1331529_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA
AZE34267.1\|1331635_1332748_+	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	8.3e-30	27.2
AZE34268.1\|1332836_1333682_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZE34269.1\|1333734_1334208_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZE34270.1\|1334204_1335263_+\|tRNA	tRNA pseudouridine(13) synthase	NA	NA	NA	NA
AZE34271.1\|1335250_1336000_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	52.6
AZE34272.1\|1335999_1336677_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-43	52.0
AZE34273.1\|1336886_1337720_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	6.3e-06	33.3
AZE34274.1\|1337826_1338831_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AZE34275.1\|1339331_1339655_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZE34276.1\|1339797_1342377_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	3.1e-27	23.5
AZE34277.1\|1342573_1343299_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	1.3e-124	91.4
AZE34278.1\|1343854_1344283_+	hypothetical protein	NA	NA	NA	NA
AZE34279.1\|1344643_1345225_+	hypothetical protein	NA	NA	NA	NA
AZE34280.1\|1345327_1345675_+	Holin	B5TK61	Pseudomonas_phage	1.0e-50	87.7
AZE34281.1\|1345841_1346606_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	2.0e-06	26.3
AZE34282.1\|1346831_1347356_+	hypothetical protein	NA	NA	NA	NA
AZE34283.1\|1347359_1347968_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	1.8e-47	59.1
AZE34284.1\|1347981_1348314_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	2.1e-37	69.1
AZE34285.1\|1348310_1349306_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	8.9e-108	62.3
AZE34286.1\|1349302_1350037_+\|tail	Phage tail fiber	A0A2H4JDK0	uncultured_Caudovirales_phage	3.4e-40	51.4
AZE34287.1\|1350033_1350564_+\|tail	Phage tail fiber	A2I2X8	Vibrio_virus	3.4e-50	61.9
AZE34288.1\|1351143_1351473_+	hypothetical protein	NA	NA	NA	NA
AZE34289.1\|1351475_1351778_+	Phage protein	Q8H9M8	Vibrio_phage	1.8e-11	64.6
AZE34290.1\|1351864_1352086_+	hypothetical protein	NA	NA	NA	NA
AZE34291.1\|1352088_1353255_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	1.4e-125	57.5
AZE34292.1\|1353254_1353761_+	hypothetical protein	Q6R4W3	Vibrio_virus	2.6e-23	35.7
AZE34293.1\|1353887_1354499_+	hypothetical protein	B0ZSH0	Halomonas_phage	1.5e-25	36.4
AZE34294.1\|1354495_1354621_+	hypothetical protein	NA	NA	NA	NA
AZE34295.1\|1354627_1356835_+	Phage protein	A0A2H4JAA5	uncultured_Caudovirales_phage	7.2e-09	49.3
AZE34296.1\|1356834_1357218_+\|tail	Unclassified tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	4.0e-40	59.8
AZE34297.1\|1357210_1357423_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	6.9e-18	61.4
AZE34298.1\|1357432_1358449_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	1.0e-106	56.6
AZE34299.1\|1358591_1359176_+	hypothetical protein	B5TK65	Pseudomonas_phage	3.1e-76	72.5
AZE34300.1\|1359172_1359355_+	Mu-like prophage FluMu protein GP38	B5TK66	Pseudomonas_phage	6.5e-25	93.3
AZE34301.1\|1359354_1360851_+\|tail	Bacteriophage tail sheath protein	B5TK67	Pseudomonas_phage	2.0e-257	91.0
AZE34302.1\|1360917_1361265_+\|tail	Phage tail tube protein	B5TK68	Pseudomonas_phage	2.9e-58	93.9
AZE34303.1\|1361261_1361558_+\|tail	Phage small tail protein E	B5TK69	Pseudomonas_phage	2.3e-43	94.9
AZE34304.1\|1361688_1363764_+\|tail	Phage tail length tape-measure protein	B5TK70	Pseudomonas_phage	1.8e-38	48.2
AZE34305.1\|1363750_1364989_+\|tail	Phage tail/DNA circulation protein	B5TK71	Pseudomonas_phage	5.7e-181	75.7
AZE34306.1\|1364992_1366033_+\|tail	Prophage tail protein	B5TK72	Pseudomonas_phage	3.8e-162	82.7
AZE34307.1\|1366149_1366659_+\|plate	Prophage baseplate assembly protein V	B5TK73	Pseudomonas_phage	2.2e-78	88.8
AZE34308.1\|1366658_1367057_+	Bacteriophage protein GP46	B5TK74	Pseudomonas_phage	1.7e-65	89.4
AZE34309.1\|1367046_1368087_+	Phage FluMu protein gp47	B5TK75	Pseudomonas_phage	3.0e-167	87.3
AZE34310.1\|1368074_1368674_+\|tail	Prophage tail protein	B5TK76	Pseudomonas_phage	2.5e-105	91.0
AZE34311.1\|1368685_1369540_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	1.5e-23	76.4
AZE34312.1\|1369544_1370186_+\|tail	putative tail fiber assembly-like protein	B5TK78	Pseudomonas_phage	1.4e-37	51.9
AZE34313.1\|1370317_1371238_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	7.4e-24	61.1
AZE34314.1\|1371237_1371717_+	hypothetical protein	A0A291LAV4	Bordetella_phage	1.3e-11	52.1
AZE34315.1\|1371876_1372779_+\|tail	Prophage tail fiber protein	B5TK81	Pseudomonas_phage	1.8e-35	37.6
AZE34316.1\|1373330_1374071_+\|tail	Prophage tail fiber protein	B5TK77	Pseudomonas_phage	2.1e-21	65.8
AZE34317.1\|1374073_1374505_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	2.2e-23	38.4
AZE34318.1\|1374550_1375114_+	Lytic enzyme	B5TK83	Pseudomonas_phage	3.7e-87	83.3
AZE34319.1\|1375095_1375632_+	hypothetical protein	B5TK84	Pseudomonas_phage	6.3e-60	71.3
AZE34320.1\|1375714_1376215_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	1.0e-72	86.1
AZE34321.1\|1376298_1377351_+	RecA protein	A0A0S2MVG1	Bacillus_phage	4.4e-113	60.9
AZE34322.1\|1377359_1377827_+	Regulatory protein RecX	NA	NA	NA	NA
AZE34323.1\|1377872_1378988_-	Decarboxylase family protein	NA	NA	NA	NA
AZE34324.1\|1379471_1379666_+	hypothetical protein	NA	NA	NA	NA
AZE34325.1\|1379667_1380090_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA
AZE34326.1\|1380279_1380990_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA
AZE34327.1\|1381324_1381975_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA
AZE34328.1\|1382051_1382414_+	Diacylglycerol kinase	NA	NA	NA	NA
AZE34329.1\|1382410_1383337_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZE34330.1\|1383470_1384250_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA
AZE34331.1\|1384322_1385018_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA
AZE34332.1\|1385104_1385875_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA
AZE34333.1\|1386008_1386470_-	Uncharacterized protein YehS	Q9EYF4	Enterobacteria_phage	8.5e-37	51.3
AZE34334.1\|1386536_1387247_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA
AZE34335.1\|1387329_1387803_-	Acetyltransferase	NA	NA	NA	NA
AZE34336.1\|1387909_1389247_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA
AZE34337.1\|1389347_1389617_-	hypothetical protein	NA	NA	NA	NA
AZE34338.1\|1389638_1391480_+	Kup system potassium uptake protein	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	8.0e-78	35.0
AZE34339.1\|1391679_1391955_-	hypothetical protein	NA	NA	NA	NA
AZE34340.1\|1392452_1393748_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA
AZE34341.1\|1393747_1396396_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA
AZE34342.1\|1397334_1398399_+	DNA polymerase IV	NA	NA	NA	NA
AZE34343.1\|1398600_1399554_-	putative lipoprotein	NA	NA	NA	NA
AZE34344.1\|1399571_1401287_-\|tRNA	Prolyl-tRNA synthetase, bacterial type	NA	NA	NA	NA

DBSCAN-SWA_2

2261502 : 2269565

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE35117.1\|2261502_2262459_-	hypothetical protein	W6MYA3	Pseudomonas_phage	1.9e-27	31.2
AZE35118.1\|2262668_2263538_-	Integrase	A0A2H4J1K3	uncultured_Caudovirales_phage	2.0e-151	91.3
AZE35119.1\|2264105_2264744_+	hypothetical protein	A0A059VFX9	Pseudomonas_phage	4.0e-61	60.1
AZE35120.1\|2264923_2266021_+	hypothetical protein	W6MVL2	Pseudomonas_phage	2.9e-27	29.5
AZE35121.1\|2266204_2266543_+	Cell wall hydrolase	A0A2D1GNI1	Pseudomonas_phage	1.9e-46	71.4
AZE35122.1\|2266542_2267061_+	hypothetical protein	A0A2H4IZW4	uncultured_Caudovirales_phage	4.2e-53	64.5
AZE35123.1\|2267064_2267772_-	Gifsy-2 prophage protein	A0A2H4J991	uncultured_Caudovirales_phage	8.3e-92	70.0
AZE35124.1\|2268167_2269565_-	Transposase	W5R8L2	Staphylococcus_phage	2.2e-40	32.5

DBSCAN-SWA_3

2352157 : 2390790

Pseudomonas_phage(35.14%)

transposase,capsid,terminase,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE35211.1\|2352157_2352448_-	putative antitoxin	A4JWV1	Burkholderia_virus	1.9e-10	42.4
AZE35212.1\|2352449_2352743_-	putative toxin	A0A141GEX6	Brucella_phage	6.4e-22	55.9
AZE35213.1\|2352977_2354372_-	Uncharacterized protein YdcJ	NA	NA	NA	NA
AZE35214.1\|2354636_2355761_+	Two-component response regulator	A0A127AWB9	Bacillus_phage	1.9e-18	39.7
AZE35215.1\|2355854_2355953_+	hypothetical protein	NA	NA	NA	NA
AZE35216.1\|2356472_2357540_-\|tail	Prophage tail fiber protein	A4JWL8	Burkholderia_virus	1.2e-22	28.7
AZE35217.1\|2357539_2358121_-	hypothetical protein	Q6QI98	Burkholderia_phage	1.0e-47	54.6
AZE35218.1\|2358113_2359235_-\|plate	Phage baseplate	A4JWL6	Burkholderia_virus	3.4e-87	48.0
AZE35219.1\|2359218_2359596_-\|plate	putative bacteriophage baseplate protein	Q6QIA0	Burkholderia_phage	1.5e-31	56.0
AZE35220.1\|2359702_2360446_+	hypothetical protein	NA	NA	NA	NA
AZE35221.1\|2360433_2360985_-\|plate	Phage baseplate protein	NA	NA	NA	NA
AZE35222.1\|2360984_2362100_-\|tail	Putative tail protein D	Q6QIA2	Burkholderia_phage	2.4e-61	38.1
AZE35223.1\|2362087_2362294_-\|tail	Phage tail fiber protein	Q6QIA3	Burkholderia_phage	2.1e-16	61.4
AZE35224.1\|2362293_2363175_-	hypothetical protein	A0A067ZI88	Vibrio_phage	3.5e-07	34.1
AZE35225.1\|2363174_2365571_-\|tail	Phage tail length tape-measure protein	A4JWL0	Burkholderia_virus	2.3e-133	38.3
AZE35226.1\|2365847_2365961_-	hypothetical protein	NA	NA	NA	NA
AZE35227.1\|2365947_2366262_-	hypothetical protein	NA	NA	NA	NA
AZE35228.1\|2366403_2367108_+	hypothetical protein	NA	NA	NA	NA
AZE35229.1\|2367149_2367674_-\|tail	Phage tail connector protein	Q6QIA9	Burkholderia_phage	6.6e-46	49.4
AZE35230.1\|2367674_2369099_-\|tail	Phage tail sheath monomer	A4JWK5	Burkholderia_virus	2.2e-176	64.5
AZE35231.1\|2369105_2369339_-	hypothetical protein	NA	NA	NA	NA
AZE35232.1\|2369335_2369818_-	hypothetical protein	NA	NA	NA	NA
AZE35233.1\|2369817_2370252_-	Mu-like prophage FluMu protein gp36	Q6QIB3	Burkholderia_phage	4.4e-43	57.3
AZE35234.1\|2370254_2371235_-	phage-related protein, putative	A0A2H4J890	uncultured_Caudovirales_phage	9.8e-59	39.8
AZE35235.1\|2371248_2371617_-	hypothetical protein	NA	NA	NA	NA
AZE35236.1\|2371625_2372648_-	Phage protein	A4JWJ9	Burkholderia_virus	1.1e-76	47.2
AZE35237.1\|2373280_2373757_-\|capsid	Phage capsid and scaffold	Q6QIB8	Burkholderia_phage	6.7e-21	40.1
AZE35238.1\|2373758_2374598_-	Phage (Mu-like) virion morphogenesis protein	A0A1C6ZDL9	Pseudomonas_phage	8.1e-86	59.4
AZE35239.1\|2374597_2376094_-	Mu-like prophage FluMu protein gp29	Q6QIC0	Burkholderia_phage	7.7e-156	57.3
AZE35240.1\|2376090_2377419_-	Mu-like prophage FluMu protein gp28	A0A2P9JZI8	Alteromonadaceae_phage	4.9e-154	65.0
AZE35241.1\|2377415_2377925_-\|terminase	Phage terminase, small subunit	J9SH37	Pseudomonas_phage	7.7e-23	43.5
AZE35242.1\|2377962_2378256_-	hypothetical protein	J9SNG3	Pseudomonas_phage	2.6e-23	62.2
AZE35243.1\|2378252_2378558_-	hypothetical protein	J9STR5	Pseudomonas_phage	5.1e-14	41.7
AZE35244.1\|2378779_2379379_-	Phage lipoprotein	A0A0S4L1H0	Pseudomonas_phage	5.8e-38	49.5
AZE35245.1\|2379368_2379569_-	hypothetical protein	NA	NA	NA	NA
AZE35246.1\|2379565_2379805_-	hypothetical protein	NA	NA	NA	NA
AZE35247.1\|2379801_2380269_-\|capsid	Phage capsid and scaffold	J9Q7Y7	Salmonella_phage	7.0e-39	54.0
AZE35248.1\|2380680_2380812_+	hypothetical protein	NA	NA	NA	NA
AZE35249.1\|2381215_2381806_-	hypothetical protein	NA	NA	NA	NA
AZE35250.1\|2382311_2382524_+	Phage DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	4.2e-23	76.8
AZE35251.1\|2382915_2383395_+	Phage protein	Q6QID6	Burkholderia_phage	8.5e-56	65.2
AZE35252.1\|2383391_2383694_+	Transcriptional regulator, IclR family	Q5ZR02	Pseudomonas_phage	1.7e-25	64.9
AZE35253.1\|2383704_2384640_+	DNA repair ATPase	J9SND0	Pseudomonas_phage	1.3e-65	48.7
AZE35254.1\|2384643_2386419_+\|transposase	Phage transposase	A0A0S4L2U5	Pseudomonas_phage	3.2e-193	59.3
AZE35255.1\|2386418_2387600_+	Eha	Q6QIE1	Burkholderia_phage	4.9e-129	61.9
AZE35256.1\|2387601_2387922_+	hypothetical protein	J9SNT1	Pseudomonas_phage	9.4e-11	41.6
AZE35257.1\|2387914_2388199_+	hypothetical protein	J9STZ0	Pseudomonas_phage	9.2e-10	39.6
AZE35258.1\|2388198_2388678_+	hypothetical protein	NA	NA	NA	NA
AZE35259.1\|2388670_2389288_+	hypothetical protein	Q5ZR10	Pseudomonas_phage	1.5e-41	38.1
AZE35260.1\|2389289_2389679_+	hypothetical protein	A0A1I9LJN3	Stx_converting_phage	1.5e-07	32.5
AZE35261.1\|2389680_2390121_+	hypothetical protein	A0A076FX15	Pseudomonas_phage	4.3e-38	53.1
AZE35262.1\|2390122_2390341_+	hypothetical protein	NA	NA	NA	NA
AZE35263.1\|2390337_2390790_+	hypothetical protein	Q6QIE7	Burkholderia_phage	3.7e-29	55.1

DBSCAN-SWA_4

3857043 : 3890035

uncultured_Caudovirales_phage(70.37%)

protease,integrase,terminase,tail,plate

attL 3877648:3877669|attR 3898046:3898067

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE36608.1\|3857043_3857595_-	Phage endolysin	A0A2H4JHX4	uncultured_Caudovirales_phage	5.5e-67	68.7
AZE36609.1\|3857618_3858671_-\|tail	Phage tail protein D	A0A2H4JBF6	uncultured_Caudovirales_phage	9.3e-148	74.9
AZE36610.1\|3858728_3858935_-\|tail	Phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	7.1e-20	68.7
AZE36611.1\|3858909_3859755_-	Phage protein U	A0A2H4J875	uncultured_Caudovirales_phage	6.6e-88	58.2
AZE36612.1\|3859764_3862302_-	Phage protein	A0A2H4JG00	uncultured_Caudovirales_phage	6.9e-80	37.3
AZE36613.1\|3862433_3862730_-	hypothetical protein	A0A2H4J873	uncultured_Caudovirales_phage	2.7e-20	57.4
AZE36614.1\|3862757_3863267_-\|tail	Phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	4.3e-66	73.1
AZE36615.1\|3863279_3864446_-\|tail	Phage tail sheath monomer	A0A2H4J869	uncultured_Caudovirales_phage	2.9e-182	81.8
AZE36616.1\|3864986_3866546_-\|tail	Phage tail fiber protein	A0A077K818	Ralstonia_phage	4.4e-69	53.7
AZE36617.1\|3866538_3867147_-\|tail	Phage tail fiber	A0A2H4JDH5	uncultured_Caudovirales_phage	1.4e-79	72.2
AZE36618.1\|3867148_3868030_-\|plate	Baseplate assembly protein J	A0A2H4JFK9	uncultured_Caudovirales_phage	5.8e-111	70.0
AZE36619.1\|3868026_3868353_-\|plate	Phage baseplate assembly protein	A0A2H4JA09	uncultured_Caudovirales_phage	6.2e-34	65.1
AZE36620.1\|3868355_3868571_-	hypothetical protein	NA	NA	NA	NA
AZE36621.1\|3868614_3869196_-\|plate	Baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.8e-55	64.6
AZE36622.1\|3869192_3869726_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.4e-35	41.8
AZE36623.1\|3869718_3870381_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	1.7e-70	59.6
AZE36624.1\|3870377_3870698_-	hypothetical protein	NA	NA	NA	NA
AZE36625.1\|3870700_3870880_-	hypothetical protein	NA	NA	NA	NA
AZE36626.1\|3870881_3871913_-	hypothetical protein	A0A0C5ABI0	Bacteriophage	2.7e-67	40.9
AZE36627.1\|3871924_3872275_-	hypothetical protein	NA	NA	NA	NA
AZE36628.1\|3872287_3873508_-\|protease	Periplasmic serine protease (ClpP class)	A0A219YB02	Aeromonas_phage	1.5e-48	42.3
AZE36629.1\|3873510_3875118_-	hypothetical protein	A0A067ZJA4	Vibrio_phage	2.0e-93	42.0
AZE36630.1\|3875120_3875336_-	hypothetical protein	NA	NA	NA	NA
AZE36631.1\|3875348_3877274_-\|terminase	Phage terminase, large subunit	A0A2D1GMT1	Marinobacter_phage	6.9e-165	48.4
AZE36632.1\|3877278_3877800_-\|terminase	Phage DNA packaging protein, Nu1 subunit of terminase	NA	NA	NA	NA
3877648:3877669	attL	NA	NA	NA	NA
AZE36633.1\|3877993_3878299_-	hypothetical protein	A0A2H4JBW4	uncultured_Caudovirales_phage	3.6e-20	52.9
AZE36634.1\|3878418_3878667_+	hypothetical protein	A0A2H4J888	uncultured_Caudovirales_phage	2.0e-16	56.1
AZE36635.1\|3878714_3879062_-	Holin	A0A2H4J893	uncultured_Caudovirales_phage	3.7e-45	84.1
AZE36636.1\|3879198_3879495_+	hypothetical protein	NA	NA	NA	NA
AZE36637.1\|3879992_3880355_-	hypothetical protein	NA	NA	NA	NA
AZE36638.1\|3880347_3882564_-	DNA primase, phage associated	A0A2D1GN57	Marinobacter_phage	1.9e-190	47.1
AZE36639.1\|3882553_3882781_-	hypothetical protein	A0A218M4I6	Erwinia_phage	7.6e-07	44.0
AZE36640.1\|3882773_3883292_-	hypothetical protein	NA	NA	NA	NA
AZE36641.1\|3883964_3884696_+	repressor protein c2	A5VW98	Enterobacteria_phage	2.9e-31	38.7
AZE36642.1\|3884710_3885355_-	hypothetical protein	NA	NA	NA	NA
AZE36643.1\|3885347_3885902_-	hypothetical protein	NA	NA	NA	NA
AZE36644.1\|3886131_3886308_+	hypothetical protein	NA	NA	NA	NA
AZE36645.1\|3886304_3886895_+	hypothetical protein	NA	NA	NA	NA
AZE36646.1\|3886905_3887196_+	DNA-binding protein Roi-related protein	NA	NA	NA	NA
AZE36647.1\|3887354_3887672_+	transcriptional regulator, putative	NA	NA	NA	NA
AZE36648.1\|3887720_3888140_+	hypothetical protein	NA	NA	NA	NA
AZE36649.1\|3888136_3888358_+	hypothetical protein	NA	NA	NA	NA
AZE36650.1\|3888354_3888444_+	hypothetical protein	NA	NA	NA	NA
AZE36651.1\|3888440_3888731_+	C-5 cytosine-specific DNA methylase	NA	NA	NA	NA
AZE36652.1\|3888730_3888967_+	Phage protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.3e-25	71.4
AZE36653.1\|3888970_3890035_+\|integrase	Phage-related integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	2.8e-115	61.1
3898046:3898067	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4317364 : 4323623

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE37020.1\|4317364_4317757_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	6.7e-59	84.6
AZE37021.1\|4317760_4318123_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.5e-44	75.0
AZE37022.1\|4318122_4318422_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.1e-32	69.7
AZE37023.1\|4318418_4318754_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	1.9e-46	82.0
AZE37024.1\|4318750_4319752_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	1.8e-164	84.1
AZE37025.1\|4319841_4320849_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZE37026.1\|4320947_4322342_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZE37027.1\|4322342_4323623_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.1e-101	55.1

DBSCAN-SWA_6

5732863 : 5743467

Pseudomonas_phage(100.0%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE38310.1\|5732863_5734105_+	Integrase	A0A1B0VMI6	Pseudomonas_phage	8.9e-65	38.2
AZE38311.1\|5734186_5735086_+	hypothetical protein	NA	NA	NA	NA
AZE38312.1\|5735184_5735454_+	putative transcriptional regulator	NA	NA	NA	NA
AZE38313.1\|5735454_5735823_+	hypothetical protein	A0A1B0VRK7	Pseudomonas_phage	5.3e-34	65.8
AZE38314.1\|5736134_5736296_+	hypothetical protein	A0A1B0VP73	Pseudomonas_phage	1.8e-10	71.4
AZE38315.1\|5736292_5736607_+	hypothetical protein	NA	NA	NA	NA
AZE38316.1\|5736603_5736864_+	hypothetical protein	NA	NA	NA	NA
AZE38317.1\|5736860_5737076_+	hypothetical protein	NA	NA	NA	NA
AZE38318.1\|5737072_5737570_+	hypothetical protein	NA	NA	NA	NA
AZE38319.1\|5737574_5737850_+	hypothetical protein	A0A1B0VMJ4	Pseudomonas_phage	1.1e-39	84.6
AZE38320.1\|5737842_5738064_+	hypothetical protein	NA	NA	NA	NA
AZE38321.1\|5738060_5738942_+	DNA primase, phage associated	A0A1B0VML8	Pseudomonas_phage	1.5e-138	84.0
AZE38322.1\|5738928_5740731_+	DNA primase, phage-associated	A0A1B0VP75	Pseudomonas_phage	0.0e+00	95.3
AZE38323.1\|5741374_5741980_+	hypothetical protein	A0A1B0VMK2	Pseudomonas_phage	5.1e-50	50.2
AZE38324.1\|5742091_5742442_+	hypothetical protein	A0A1B0VML3	Pseudomonas_phage	2.3e-34	63.8
AZE38325.1\|5742445_5743045_+\|tail	Phage tail assembly protein I	A0A1B0VMI5	Pseudomonas_phage	1.7e-53	59.4
AZE38326.1\|5743113_5743467_+	hypothetical protein	A0A1B0VMC6	Pseudomonas_phage	9.1e-15	48.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027751

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection