CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	4 crisprs	DEDDh,DinG,csa3,cas3,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027758_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027758_1

120378-120488

Orphan

Consensus_repeat	Method
TGTAGCTTAGTTGGTTAGAGCGCACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027758_1

>merge|CP027758|1|120378-120488|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCCATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCC

>CP027758|1|1|120378-120488|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCC	ATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTC
TGTAGCTCAGTTGGTTAGAGCGCACCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP027758.1\|AZE75935.1\|113132_114254_-\|NAD(P)-transhydrogenase-alpha-subunit	unknown	unknown	gnl\|CDD\|240629
CP027758.1\|AZE75946.1\|134054_136007_+\|Membrane-bound-c-di-GMP-receptor-LapD	unknown	unknown	gnl\|CDD\|238923
CP027758.1\|AZE75932.1\|109684_111178_-\|Acetyl-CoA-hydrolase	unknown	unknown	gnl\|CDD\|274588
CP027758.1\|AZE75941.1\|126944_130322_-\|Nonribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341253
CP027758.1\|AZE75945.1\|133416_134040_+\|T1SS-associated-transglutaminase-like-cysteine-proteinase-LapP	unknown	unknown	gnl\|CDD\|226198
CP027758.1\|AZE75939.1\|124546_126427_+\|Methyl-accepting-chemotaxis-sensor/transducer-protein	unknown	unknown	gnl\|CDD\|223910
CP027758.1\|AZE75934.1\|112793_113117_-\|NAD(P)-transhydrogenase-alpha-subunit	unknown	unknown	gnl\|CDD\|378941
CP027758.1\|AZE75938.1\|116958_118179_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224717
CP027758.1\|AZE75931.1\|109150_109366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227744
CP027758.1\|AZE75948.1\|136628_153692_-\|T1SS-secreted-agglutinin-RTX	unknown	unknown	gnl\|CDD\|238119
CP027758.1\|AZE75937.1\|115763_116945_+\|Glutaryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173840
CP027758.1\|AZE75942.1\|130318_131266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378680
CP027758.1\|AZE75947.1\|136138_136477_-\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE75943.1\|131262_132021_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378614
CP027758.1\|AZE75940.1\|126466_126925_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176863
CP027758.1\|AZE75936.1\|114706_115606_-\|Transcriptional-regulator,-LysR-family	unknown	unknown	gnl\|CDD\|176170
CP027758.1\|AZE75944.1\|132386_133097_-\|Transcriptional-regulator,-GntR-family	unknown	unknown	gnl\|CDD\|224715
CP027758.1\|AZE75933.1\|111357_112794_-\|NAD(P)-transhydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|224201
CP027758.1\|AZE75930.1\|108501_108822_-\|Outer-membrane-receptor-protein	unknown	unknown	gnl\|CDD\|274137
CP027758.1\|AZE75929.1\|108086_108395_-\|Holliday-junction-resolvasome,-helicase-subunit	unknown	unknown	gnl\|CDD\|274137

Protein	Function_ID	Function_description	E-value
CP027758.1\|AZE75935.1\|113132_114254_-\|NAD(P)-transhydrogenase-alpha-subunit	gnl\|CDD\|240629	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains. Transhydrogenases found in bacterial and inner mitochondrial membranes link NAD(P)(H)-dependent redox reactions to proton translocation. The energy of the proton electrochemical gradient (delta-p), generated by the respiratory electron transport chain, is consumed by transhydrogenase in NAD(P)+ reduction. Transhydrogenase is likely involved in the regulation of the citric acid cycle. Rubrum transhydrogenase has 3 components, dI, dII, and dIII. dII spans the membrane while dI and dIII protrude on the cytoplasmic/matrix side. DI contains 2 domains in Rossmann-like folds, linked by a long alpha helix, and contains a NAD binding site. Two dI polypeptides (represented in this sub-family) spontaneously form a heterotrimer with dIII in the absence of dII. In the heterotrimer, both dI chains may bind NAD, but only one is well-ordered. dIII also binds a well-ordered NADP, but in a different orientation than a classical Rossmann domain.	0
CP027758.1\|AZE75946.1\|134054_136007_+\|Membrane-bound-c-di-GMP-receptor-LapD	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.79848e-55
CP027758.1\|AZE75932.1\|109684_111178_-\|Acetyl-CoA-hydrolase	gnl\|CDD\|274588	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase. This family of CoA transferases includes enzymes catalyzing at least two related but distinct activities. The E. coli YgfH protein has been characterized as a propionyl-CoA:succinate CoA transferase where it appears to be involved in a pathway for the decarboxylation of succinate to propionate. The Clostridium kluyveri CAT1 protein has been characterized as a acetyl-CoA:succinate CoA transferase and is believed to be involved in anaerobic succinate degradation. The propionate:succinate transferase activity has been reported in the propionic acid fermentation of propionibacterium species, where it is distinct from the coupled activities of distinct nucleotide-triphosphate dependent succinate and propionate/acetate CoA transferases (as inferred from activity in the absence of NTPs). The family represented by this model includes a member from Propionibacterium acnes KPA171202 which is likely to be responsible for this activity. A closely related clade not included in this family are the Ach1p proteins of fungi which are acetyl-CoA hydrolases. This name has been applied to many of the proteins represented by this model, possibly erroneously.	0
CP027758.1\|AZE75941.1\|126944_130322_-\|Nonribosomal-peptide-synthetase	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	2.14932e-125
CP027758.1\|AZE75945.1\|133416_134040_+\|T1SS-associated-transglutaminase-like-cysteine-proteinase-LapP	gnl\|CDD\|226198	COG3672, COG3672, Predicted transglutaminase-like cysteine proteinase [General function prediction only].	1.15476e-39
CP027758.1\|AZE75939.1\|124546_126427_+\|Methyl-accepting-chemotaxis-sensor/transducer-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.34267e-78
CP027758.1\|AZE75934.1\|112793_113117_-\|NAD(P)-transhydrogenase-alpha-subunit	gnl\|CDD\|378941	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch. PNTB_4TM is the region upstream of family PNTB, pfam02233, that carries four of this transporters transmembrane regions. PNTB is the beta-subunit of pyridine nucleotide transhydrogenase. This family forms part of the Proton-translocating Transhydrogenase (PTH) Family.	9.20761e-40
CP027758.1\|AZE75938.1\|116958_118179_+\|hypothetical-protein	gnl\|CDD\|224717	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion].	3.92941e-172
CP027758.1\|AZE75931.1\|109150_109366_-\|hypothetical-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	4.8736e-08
CP027758.1\|AZE75948.1\|136628_153692_-\|T1SS-secreted-agglutinin-RTX	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.23466e-11
CP027758.1\|AZE75937.1\|115763_116945_+\|Glutaryl-CoA-dehydrogenase	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	0
CP027758.1\|AZE75942.1\|130318_131266_-\|hypothetical-protein	gnl\|CDD\|378680	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF. This family is a metalloenzyme which is involved in the biosynthesis of antibiotic aureothin by catalyzing the formation of p-nitrobenzoic acid from p-aminobenzoic acid. AurF is a non-heme di-iron monooxygenase which creates nitroarenes via the sequential oxidation of aminoarenes.	1.87091e-08
CP027758.1\|AZE75943.1\|131262_132021_-\|hypothetical-protein	gnl\|CDD\|378614	pfam11251, DUF3050, Protein of unknown function (DUF3050). This bacterial family of proteins has no known function.	1.44036e-113
CP027758.1\|AZE75940.1\|126466_126925_-\|hypothetical-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	2.281e-25
CP027758.1\|AZE75936.1\|114706_115606_-\|Transcriptional-regulator,-LysR-family	gnl\|CDD\|176170	cd08481, PBP2_GcdR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators GcdR-like, contains the type 2 periplasmic binding fold. GcdR is involved in the glutaconate/glutarate-specific activation of the Pg promoter driving expression of a glutaryl-CoA dehydrogenase-encoding gene (gcdH). The GcdH protein is essential for the anaerobic catabolism of many aromatic compounds and some alicyclic and dicarboxylic acids. The structural topology of this substrate-binding domain is most similar to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.90447e-101
CP027758.1\|AZE75944.1\|132386_133097_-\|Transcriptional-regulator,-GntR-family	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	4.81794e-39
CP027758.1\|AZE75933.1\|111357_112794_-\|NAD(P)-transhydrogenase-subunit-beta	gnl\|CDD\|224201	COG1282, PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion].	0
CP027758.1\|AZE75930.1\|108501_108822_-\|Outer-membrane-receptor-protein	gnl\|CDD\|274137	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein. This family consists of small hypothetical proteins, about 100 amino acids in length. The family includes five members (three in tandem) in Pseudomonas aeruginosa PAO1, and also in Pseudomonas putida KT2440, four in Pseudomonas syringae DC3000, and single members in several other Proteobacteria. The function is unknown.	3.80668e-22
CP027758.1\|AZE75929.1\|108086_108395_-\|Holliday-junction-resolvasome,-helicase-subunit	gnl\|CDD\|274137	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein. This family consists of small hypothetical proteins, about 100 amino acids in length. The family includes five members (three in tandem) in Pseudomonas aeruginosa PAO1, and also in Pseudomonas putida KT2440, four in Pseudomonas syringae DC3000, and single members in several other Proteobacteria. The function is unknown.	4.08888e-25

>CP027758.1|AZE75938.1|116958_118179_+|hypothetical-protein
MGALSHLRVLDLSRVLAGPWSGQILADLGAEVIKVERPGSGDDTRAWGPPFLKDADGENTSEAAYYLSANRNKESVTIDFTRPEGQKLVRDLAAKSDILIENFKVGGLAAYGLDYESLKEANPELIYCSITGFGQTGPYATRAGYDFMIQGLGGLMSLTGKPEGDQGAGPVKVGVALTDILTGLYSTVAILAALAHRDHDGGGQHIDMALLDVQVACLANQAMNYLTTGASPKRLGNAHPNIVPYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWADDPRFSTNRARVANRAVLIPLIRQATVFKTTAEWVAGLERVGVPCGPINDLAQVFADPQVKARGLAMELPHALAGMVPQVASPIRLSKTPVEYRSAPPLLGEHTLQVLQGVLGLGAANVAALKAAGVI
>CP027758.1|AZE75937.1|115763_116945_+|Glutaryl-CoA-dehydrogenase
MAGKASFNWIDPLLLDQQLTEEERMVRDSAEQFAQDKLAPRVLEAFRHEKTDPAIFREMGETGLLGAMIPEQYGGSGLNYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQKYLPKLASGEWIGCFGLTEPDHGSDPGAMITRARKVDGGYSLTGAKMWITNSPIADVFVVWGKDDAGDIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDNVFVPEENIFPDVRGLKGPFTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAATQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGLQAFY
>CP027758.1|AZE75936.1|114706_115606_-|Transcriptional-regulator,-LysR-family
MRRKIPSTTALISFEAAARHESFTKAAQELSITQGAVCRQIASLEEFLSVELFRRSRRGVKLTEAGLSYSRRVATQLDAVERDTLSVMGQQGANVIELAVVPTFGTQWLIPRLKDFQRQHPEVTVNLTNRTRPFLFADTEFDAAIYFGDADWSGTESHRLMGENPVPVCSPCLLDGRTHFTPQEIAELPLLQQTTRPYAWRQWFNARQLNVPRDMTGPRYELFSMLSQAATHDMGVALIPPFLIQRELKEQQLVIASNEALSSEKAYYLMIPDKKVESASLHAFRDWLVDQSQRYSPST
>CP027758.1|AZE75935.1|113132_114254_-|NAD(P)-transhydrogenase-alpha-subunit
MHIGVPLETQTGETRVAATPETIKKLIGQGHKVTVQSGAGINASIVDSAYETAGATIGSANDAFGAELILKVVAPSDSELALIKSGTVLVGMLNPFSNETIAKLAERGVTAFALEAAPRTSRAQSLDVLSSQANIAGYKAVLLAAHHYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETDEERECAVGVGGYARPMPTSWMQRQALAVHERAKQADIVITTALIPGRKAPTLLSADTVAQMKPGSVVIDLAAAQGGNCPLTVADQVVVENGVIICGPTNLAGAVAADASALYARNLLDFLKLVFTKEGQFEINLEDDIVAACLMCRDGQVIRKNA
>CP027758.1|AZE75934.1|112793_113117_-|NAD(P)-transhydrogenase-alpha-subunit
MEELISPGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKTMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAVKEEVQK
>CP027758.1|AZE75933.1|111357_112794_-|NAD(P)-transhydrogenase-subunit-beta
MSMNLVTTLYLIASICFIQALKGLSHPTTSRRGNLFGMLGMALAVLTTVGLIYKLGAELATAGIGYVIVGLLVGGTAGSIMAKRVEMTKMPELVAFMHSMIGLAAVFIAIAAVVEPQSLGIVKHLGDSIPAGNRLELFLGAAIGAITFSGSVIAFGKLSGKYKFRLFQGAPVQFGGQHKLNLVLGLATLGLGLAFMFTGNLTAFALMLALAFVLGVLIIIPIGGADMPVVVSMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVLLGGFGNTVDAGAAAGSKEARPVKSGSADDATFLLTNADTVIIVPGYGLAVARAQHALKELTEKLTHRGVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNPAAKNDPNSPIAGMPILEAFKAKTIIVNKRSMASGYAGLDNELFYLDKTMMVFGDAKKVIEDMVKAVE
>CP027758.1|AZE75932.1|109684_111178_-|Acetyl-CoA-hydrolase
MYRDRIRLPSLLNKVMSAAEAAALIEDGMTVGMSGFTRAGEAKAVPHALAERAKTSPLKITLMTGASLGNDLDKQLTEAGVLSRRMPFQVDSTLRKAINAGEVMFIDQHLSETVEQLRNNQLKLPDIAVIEAVAITEQGHIVPTTSVGNSASFAIFAKQVIVEINLAHNPNLEGLHDIYIPTYRPTRTPIPLVKVDDRIGSTAIPIPPEKIVAIVITNQADSASTVTPPDSDTQGIANHLINFLKQEVDAGRMTNKLGPLQAGIGNIANAVMCGLIDSPFEDLTMYSEVLQDSTFDLIDAGKLSFASGSSITLSERRNADVFGNLEHYKDKLVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVCGTRMMNGIGGSGDFARNAHLAIFVTKSIAKGGAISSVVPMVSHVDHTEHDVDILVTEMGLADLRGLAPRERARVIIDNCVHPAYRDALNTYFEAACAIGGHTPHILREALSWHINLEETGHMLKG
>CP027758.1|AZE75931.1|109150_109366_-|hypothetical-protein
MERTLSSELFFEDKAVNTNASLPLRVLANLMLWQRRISSRHQLARLDSRLLADAGISEAQRYEELSKPFWR
>CP027758.1|AZE75930.1|108501_108822_-|Outer-membrane-receptor-protein
MSRLRLLCTAAVLTLAANAHASSFIMTTDSIVGALKATSDATSDATSSLRDNKVVQAARDDAASFVASEGAIRGVKLESALAHIRQQAPQLNTATDAQLAQAILAI
>CP027758.1|AZE75929.1|108086_108395_-|Holliday-junction-resolvasome,-helicase-subunit
MAFSYRLLIVPILFSACWSPLASALDVSTQSTVVSVYATSKVTSAPFDNKLVMAAQDDAAAFIATDGQWRSARLESALDYLRRTQPKLHASDLELAQAILVQ
>CP027758.1|AZE75939.1|124546_126427_+|Methyl-accepting-chemotaxis-sensor/transducer-protein
MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIKQNLASSIQQSGELTASSVQNWLSGRILVLENLAQNVAHQGNAADLPGLVDQPALTSNFQFTYVGQTNGVFTQRPDAKMPDDYDPRQRPWYKQAVVADKTMLTPPYMAAVGGQIVTIAMPVKKNGELLGVVGGDLSLQTLVKIINSVDFGGIGHAFLVSGDGQVIVSPDQDQVMKNLKDIYSGNNVRIEKVNQDVVLNHQNRILSFTPISGLPGADWYIGLSIDKEKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQVLLRPLTTMGVAMKDIAQGEGDLTRRLDVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADDGRKVVEQTIQAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQVSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANLNETLKDCDALSQQASRLKQLVDSFKI
>CP027758.1|AZE75940.1|126466_126925_-|hypothetical-protein
MKPLQPDTLIRNPIGTPIVASVVVPCEAKRLWDVVGSFDSFDTFIPSLSHIEMTGVGVGALRTKFFHDGHCVVEQLNSRDESAMYMTWTTLYNTLGVARLWAAMSVEALGAECSKATWTLVGEPQETTQAEFEQFAQTFADSALENVRRMLG
>CP027758.1|AZE75941.1|126944_130322_-|Nonribosomal-peptide-synthetase
MKRLTIAWGAASNVLAPVKQVLEQYGHVSGTGPVDLVIEDGSRPLAQLPADAYWMSLRMGIGPVSENGLPALQFRCYDRERSLLAVYEVAEEPSGNGQRLRHQATNALVEWLALLVSSYSRNPACFTVVVTPNDWPEHSLQALETLAFKHRFNRTADPALLQAAQPPMMERLQASLDKFATRTALNIAGNLLTYQQLQAHALAIQQRLLPLLEGIETQPVIGVCLAKSVELYASILAVLGSGAVYLPLAPDHPVQRQQQMLESAGACVLLENGLHPLRDRLASLDVSKIEPCAITRALPLMRERPSADTPCMALFTSGTTGFPKGVLLSQYNLAHFSAWLGACVEMSEESRVLQFSPLSFDSSLIDIFPALIAGAELIIPSNDQRQDPRQLVELVRGQRVTHGFLPPALLSILPLDQPLGLAHLLTGGDFCEPYVIERLAGQCQLHNLYGPTETTVLATHRVFRDGDSPRNIGHPIANSQVLILDENLQPVDEQVLGDLYIAGPGVSLGYLNAPQRADSPFVALTLPDGQVLHAYRSGDLAKWTQDGIKLGGRRDDQVKIRGFRVEPQEIEQCLRNSRLFRQVAVVIDPGLRVIAFVTQPEPGATLVDLQQYARQWLPEHMRPVIWSELARMPGSSNGKIDRKALLAMPLSIPQAVTRCCAQTDVQKQLVDLWAQLLALPAGELSIDDSFFNLGGHSILLSTLLLRVRERFGRSLSLSHFFEAPTIRTLAALMEGSVLPDTPGSQMEKDASQVLEIKMLPEARAGDPRKAIVTGANSFVGAHIVHALLAAGAQEVACLVRELPGQSATARFTQALREYRLEHLDLSRVQVYAADIRQPRLGLACNVYDYLARDYGVLVHNAAQVNHVMDYVSLAKDNVEPALECLRLCETHCKKVLNFISTLSACSSVDADGYVLEAPAGHALPLYVKNGYNLSKWVAERLLGRAREQGAWVNIHRPGNISFNSQNGVCQPQKNRLMLMLKGSLQLGLVPRLDVNFDLMPVDFLAGFIAFHSVRFAPGRNVFNLHNPQPLSWDQYLDAFSEAGHAFDRVSIEHWQRTLQTVSRDNALFRVLGFYLDGLGEDIGDTSMIRHDNARWGLEKMGVDYPPKNPELLRKGCDYLRAIGFL
>CP027758.1|AZE75942.1|130318_131266_-|hypothetical-protein
MNVVNYRSFADDWERRATIRTRPRRMLEDDNKLIFPLYRQPLVLSATFLEQCPQWRDFVLVQGFYKFINDVVIFETEIVDKTARNIAKNRFSPPFPLACRYDAMTVVVDEDYHALVALDFLQQTVEMTGIQPLDLPGQIELSRALPAAQAQVPAHLHDAVELIGVAIAENTVTHDVAAFSKDDSVKSSIRGMMADHLFDEGRHAQFWTQLVRLYWESASPQDRDSIAQALPVFLEHYLTNDLQKDFDLHLIEHLEISADTRLALHHEVSALYFPINHQHPLIGNIMSLLRHSGVLQTPSVARSLSSYLPVAGRPA
>CP027758.1|AZE75943.1|131262_132021_-|hypothetical-protein
MYQELLEQKKLQLFNHPLFIEITSLNKLQHFMENHVFAVWDFMTLTKRLQQDLTCTQIPWLPPADSQAARLINEIVLGEESDEHPTRGYRSHFELYLDAMREVGASTVAITRLIDLQREGVEVSAALQMIDAPPGVARFVDSTVQVALSAPTHCVAAAFLHGRESVIPSMFQRLLHSHALIDHEAPTLCHYLNRHIEMDSHEHGPAAEQLLKRLVGADPIRQKQADNAALDAVESRISFWDEVLTSMQGEHQ
>CP027758.1|AZE75944.1|132386_133097_-|Transcriptional-regulator,-GntR-family
MTQKPNPLSSIKISGPIPAHLARSVIEETLRNAILDGRLPCGTAMRQQELASLFGVSRMPVREALRQLEAQSLLHVVTHKGAVVAPLIEDNSAETYALRMLLESEALRLSIPLLTEKDLSEAETCINALECEKDYTEIGRLNRLFHMVLYGKAPNQRLLTLVEHGLNEEERFLRFNLEAMGLGETSQEDHRELLSLVAQKKVDESILTLRNHLMRGMEVIATYLKGLETAEKKARQ
>CP027758.1|AZE75945.1|133416_134040_+|T1SS-associated-transglutaminase-like-cysteine-proteinase-LapP
MLGGLRADWDFSQISRKATAVYGPLGQGQQRIDAWQRLLATEKQVSESEQLKVVNLFFNKQMTYVEDIDLWHVIDYWETPVEALWKGAGDCEDYAIAKYFSLRHLGVSSDKLRITYVKALRQNRAHMVLTYYSTPDAIPLVLDSLMDEILPATRRTDLVPVYSFNAEGLYLPGAKGNKKVGDTKRLSRWQDVLRKMRAEGFPAEPAN
>CP027758.1|AZE75946.1|134054_136007_+|Membrane-bound-c-di-GMP-receptor-LapD
MSLFKQLLIAICLFLVVAFSGSFMVSLESSRTQYVNQLRSHAQDAATALALSLTPNIDDPAMVELLVSSIFDSGYYASIRVVDLATDKTIVERSGIPDNNGVPNWFVKLIGLEPAGGDALVSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLLCGAVSVVLGGLLLRRQLKPLDYMVKQSHAIARREFLSLPDLPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEETNSGYLLLLRVKDLAGLNQRLGGQRTDQLLQAVGEQLLRQCEPYPETHNLVTRIRGGEFAVLAPGLMREEALQLAQNLESTLLSLQATGASDVTPVAYIGLAPFNHGDAPQALLTLADQALAQAEAQGDSSWVCLDRSAAASVGDDHHAWHRLLDQALIQQRFELYFQPVVASQDTQLVLHYKVLSRLQDEDCHTIPAGRFLPWLERFGWSARLDRLMLEQVLKQMANHSHNLALNLSAATLQDTQALNRIYDLLRQHSNLGPRLTLEIGEEQLPEQHVLEQMTQRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELKVIREMGIFGVQGQLFGEPAPWKLH
>CP027758.1|AZE75947.1|136138_136477_-|hypothetical-protein
MFYVQRDALGALIRVEAAAFVESTETLPADHHEIQAWYANEVVETSLAQLKQSDLEMIRVLDDLIQVLTRKGVISVTDLPPAAQAKLMDRNHAREALGGLSQLIDDDEKGLI
>CP027758.1|AZE75948.1|136628_153692_-|T1SS-secreted-agglutinin-RTX
MSSVVAIVKSIVGQVFVISPEGTRRVLIEGDRLFAGDQVDTGMSGAVSLELADGRILDLGRDTQWSADMPDSTADLAAAAEQAAPSVAELQQAIAAGADPTTDLEATAAGAAAAGNGAAGGGHSFVVLDATAGRVDPTIGFPTGPLGQGTSTLNALAGAPGTADSGLALQPATLSLSATPTITEAGGVLTYTATVTRPSTSDLTVTLSNGAVITIPSGQLTGTVNVPLAPNDSPYIDPSQISVSVTGTTGGGNLVLTLDPNPAVTQITDTIDTTTVTLTAGDTVTEGGQITYTATLTNPAQTPVTVTLSNGSVITIKAGESTGTVVVDTPANDVYNNGSTVSTTITGASGGNFENLVPSTTPAVTTITDSVDTTTVTLSAGDTVTEGGQITYTATLTNPAQTPVTVTLSNGSVITIKAGESTGTVVVDTPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDTTTVTLTADGNVTEGGQITYTATLTNPAQTPVTVTLSNGSVITIKAGESAGNVVVDTAANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDTTTVTLTAGETVTEGGQITYTATLTNPAQTPVTVTLSNGSVITIKAGESVGSVVVDTPANDVYVNGSTISTTITGATGGNFESLVPSTTPAVTTVTDSIDTTTVTLTAPTEANEGGQVTYTATLSNKAGTDVALKLDNGSSITIKAGDTVGTVTVPAPSDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNQSSGTVSVLAPDDVYKGDQTVTTAITSVTGGEHFENLIPGTDKVTTTVTDTPGTDNTTTVTLTAPSEANEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQSITIGVNQSSGTATVAAPDDVYKGDQTVTTAIKGVTGGEHFENLIPGTDKVTTTVTDTPGTDNTTTVTLTAPSEANEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVSLDNGQSITIGVNQSSGSVSVVAPDDVYKGDQTVTAAIKGVTGGEHFENLVPGTTAVNTTVTDTPGTDNTTTVTLTAPNAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKTGDTVGTVTVPAPTDDVFIDKSTQTVQITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNQSSSSISVVAPDDVYKGDQTVTTAITNVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPSAVNEGGEITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTIPAPTDDVFIDKSTQTVKITDASGGNFERLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQSITIGVNESSSSVSVAAPDDVYKGDQTVTTAITNVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPNAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQSITIGVNESSSSVSVAAPDDVYKGDQTVTTAITNVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPNAVNEGGEITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITDASGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTIGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNQSSGTVSVLAPDDVYKGDQTVTTAIKGVTGSEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITDASGGNFEKLEVAGNGATTTINDTIDKVDVVLTATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQSITIGVNESSASVSVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTAAVNTTVTDTPGTDNTTTVTLTAPNAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTIGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNQSSGTVSVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPSAVNEGGEITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGKTIIIGVNESSASISVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLTATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGKTITIGVNESSASISVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPNAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNQSSGTATVAAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTTAVNTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLTATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGLNQSSSSVSVAAPDDVYKGDQTVTTGIKGVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTITLDNGKTITIGVNESSASVSVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTTAVNTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLTATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQTITIGVNESSASVSVLAPDDVYKGDQTVTTAIKGVTGGEHFENLVPGTTAVNTTVTDTPGTDNTTTVTLTAPSAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVKITETTGGNFEKLEVAGNGATTTINDTIDKVDVVLSATTTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGQSITIGVNESSSSVSVAAPDDVYKGDQTVTTAITNVTGGEHFENLVPGTDKVTTTVTDTPGTDNTTTVTLTAPNAVNEGGQITYTATLSNKAGTDVTLKLDNGSSITIKAGDTVGTVTVPAPTDDVFIDKSTQTVQITDATGGNFEKLEVAGNGATTTINDTIDKVDVVLTATSTVGEGGNIVYTASLVDKNGAPVTNITNPLTVTLDNGKTITIGVNQSSGTIITVAPNDVYKGDQTVTTAIKGVTGGEHFENLVPGTTAVSTTVTDTPGSTDLTSVTLTAPTAVNEGGQITYTATLSNKAGSDMVVQLDNGSSITIKQGATEGTVTVPAPTDDVFIDKSTQTVKITGTTGGNFEGVSITPGGATTTINDTIDDVTVVLKATGSVSEGGQIVYTASLVDKNGAAVNNVGSDLVVRLDNGSTITIGNGKSTSFITATAPNDAYVGANDVTTKITGVVSGGDKYEHLILDGSTVVTKVTDVVNNTTIGITGDASVTEGGTAHYTLTLSNPPLTDVTVTLKYSGTATDGSDFNGVYTVKIPAGSSSVPFDIRTLDDKITEPTEKIVITIDKATGGNFENLVVGNGSVSTDIIDNDAPPVIDLDANNSSGAIGADFKTTFTEGGTGVSIADTDIKITDPDSTQLTGATVVLTNSQPGDSLNFSGVTGINVTPSTDPVTGKITLTLTGTASLADYMQQIKNITFTNNSHDPSTTPRTITVSVTDGGNYSNVATTTVNVVAVNDAPVATGGAVTGTEDTALALTWANFGVTDVDSPQASLSVKITELPVAGKLQFLAADGSTWTNVSSGQTFTKAQIDGGQLRFMPNANESGADGYGGTGIGNKQADYAQFKFQPSDGKDLGTTATVKVDITPVADAPTLNVADNNVASTGLVKQGWNSIAGLGNNGNGAVPDVLKKAIDNAGTPNSTSVVTNVESVDNVNAGSGSKISGLIYMEAGKNYTFSGIADDSVVVNVGGKDIASGLWGTNSGKFSGSFTPSVSGYYSLEIYQANQAGPGSFDVNLSVNGGAVQNLSTSTVPLYTGITDLTNAGVTVSDLHGSNGDGYYVGYKLNEGQENGTVKLSKVTTALTDTDGSETLSVKISGIPAGSVLTDASGHTFTASKATGEVNVTGWDLGTLTIKPPTYYSGQFNLTVTSTSTESIGGSATTTAQLPVTVHPATYNPVTGTSGSDTINGTDGNDIVVADVGGLNVVQGKNYNIAFMIDTSGSMGSASIAAAKASLTTTFNSLKNSIGSSTSGTVNIFLADFSDQVNRTVTVNLKDPGALVSLQKVLDSMVSTGGTNYEDVFKAASNFFKSAQATGNTGAINTTYFITDGQPTFYQGAEQTNPYLYGNVRLDDVVTMNNYTIGTATRINIDSNHLIDIDSVGKVTLWTNNWWGWGQSNPGTIHAQGDGTYEISVQGGLGYDTDYSTTLNSNSAFALLKGLSTGGVEAIGLNSGVSLNQLAPYDSDGKPQANIDPKDLANAILGHTEATLPGADTVIGGDGNDILFGDLVSFSGINGEGYNALQAFVAQKTGVTVSSVTASNVHQYVTEHYVDFDVSGAKDANDTLLGGAGDDILFGQGGNDFLDGGKGNDILLGGTGNDTLIGGQGNDILIGGSGADTFVWKAGDIGNDVIKDFKASEGDRIDLRDLLKGETDSTIDNYLKITTVDGVSTLQVSSEGKLNAAGGVANADVTIKLEGNDWSHVSINSLITGADPTIKIDHS

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Crispr_ID: CP027758_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027758_2

2216012-2216122

Orphan

Consensus_repeat	Method
TGTAGCTTAGTTGGTTAGAGCGCACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027758_2

>merge|CP027758|2|2216012-2216122|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCCATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCC

>CP027758|2|2|2216012-2216122|CRISPRCasFinder
TGTAGCTTAGTTGGTTAGAGCGCACCCC	ATGCTCTGTGGTAAAGAGCAGGGTGAGGTCGGCCTTAGCAGCTCGAAATTGGGTC
TGTAGCTCAGTTGGTTAGAGCGCACCCC

Protein	Signature genes	Signature genes Name	Protein_function
CP027758.1\|AZE77828.1\|2228468_2229047_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379363
CP027758.1\|AZE77826.1\|2225251_2227609_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP027758.1\|AZE77821.1\|2212862_2213750_-\|Threonine/homoserine-exporter-RhtA	unknown	unknown	gnl\|CDD\|182525
CP027758.1\|AZE77830.1\|2230513_2231335_-\|Transferase-hexapeptide-repeat	unknown	unknown	gnl\|CDD\|100053
CP027758.1\|AZE77819.1\|2211576_2212308_-\|Short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|187631
CP027758.1\|AZE77816.1\|2207894_2209055_+\|Cysteine-desulfurase,-IscS	unknown	unknown	gnl\|CDD\|184450
CP027758.1\|AZE77829.1\|2229101_2230514_-\|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslK,-MATE-transporter-family	unknown	unknown	gnl\|CDD\|223800
CP027758.1\|AZE77824.1\|2222303_2222771_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176907
CP027758.1\|AZE77818.1\|2210950_2211541_-\|2-hydroxychromene-2-carboxylate-isomerase-family-protein	unknown	unknown	gnl\|CDD\|239320
CP027758.1\|AZE77825.1\|2222813_2225033_-\|Ferrichrome-iron-receptor	unknown	unknown	gnl\|CDD\|273805
CP027758.1\|AZE77831.1\|2231331_2232735_-\|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslJ,-possible-O-antigen-ligase	unknown	unknown	gnl\|CDD\|273357
CP027758.1\|AZE77817.1\|2209104_2210913_+\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|238518
CP027758.1\|AZE77815.1\|2207390_2207660_+\|putative-lipoprotein	unknown	unknown	unknown
CP027758.1\|AZE77813.1\|2205683_2206049_+\|Chromosome-segregation-ATPase	unknown	unknown	gnl\|CDD\|367760
CP027758.1\|AZE77823.1\|2221802_2222177_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|226314
CP027758.1\|AZE77820.1\|2212419_2212701_-\|putative-lipoprotein	unknown	unknown	unknown
CP027758.1\|AZE77812.1\|2205126_2205582_-\|Redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|133385
CP027758.1\|AZE77822.1\|2219908_2221801_+\|Penicillin-binding-protein-2-(PBP-2)	unknown	unknown	gnl\|CDD\|274573
CP027758.1\|AZE77814.1\|2206037_2207141_-\|Transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
CP027758.1\|AZE77827.1\|2227682_2228315_+\|putative-GST-like-protein-yncG	unknown	unknown	gnl\|CDD\|239355

Protein	Function_ID	Function_description	E-value
CP027758.1\|AZE77828.1\|2228468_2229047_+\|hypothetical-protein	gnl\|CDD\|379363	pfam13778, DUF4174, Domain of unknown function (DUF4174). This domain of unknown function is found in a putative tumor suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.	5.7078e-19
CP027758.1\|AZE77826.1\|2225251_2227609_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP027758.1\|AZE77821.1\|2212862_2213750_-\|Threonine/homoserine-exporter-RhtA	gnl\|CDD\|182525	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional.	3.71942e-125
CP027758.1\|AZE77830.1\|2230513_2231335_-\|Transferase-hexapeptide-repeat	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	2.22408e-29
CP027758.1\|AZE77819.1\|2211576_2212308_-\|Short-chain-dehydrogenase	gnl\|CDD\|187631	cd05373, SDR_c10, classical (c) SDR, subgroup 10. This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.83138e-132
CP027758.1\|AZE77816.1\|2207894_2209055_+\|Cysteine-desulfurase,-IscS	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	2.83811e-178
CP027758.1\|AZE77829.1\|2229101_2230514_-\|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslK,-MATE-transporter-family	gnl\|CDD\|223800	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only].	1.01539e-59
CP027758.1\|AZE77827.1\|2227682_2228315_+\|putative-GST-like-protein-yncG	gnl\|CDD\|239355	cd03057, GST_N_Beta, GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.	1.1441e-19
CP027758.1\|AZE77818.1\|2210950_2211541_-\|2-hydroxychromene-2-carboxylate-isomerase-family-protein	gnl\|CDD\|239320	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).	9.14581e-84
CP027758.1\|AZE77825.1\|2222813_2225033_-\|Ferrichrome-iron-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	9.27217e-93
CP027758.1\|AZE77831.1\|2231331_2232735_-\|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslJ,-possible-O-antigen-ligase	gnl\|CDD\|273357	TIGR00947, 2A73, putative bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.21836e-10
CP027758.1\|AZE77817.1\|2209104_2210913_+\|Xaa-Pro-aminopeptidase	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	1.98526e-124
CP027758.1\|AZE77813.1\|2205683_2206049_+\|Chromosome-segregation-ATPase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	0.000223708
CP027758.1\|AZE77824.1\|2222303_2222771_+\|hypothetical-protein	gnl\|CDD\|176907	cd08898, SRPBCC_CalC_Aha1-like_5, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	6.89366e-63
CP027758.1\|AZE77823.1\|2221802_2222177_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	2.6372e-24
CP027758.1\|AZE77812.1\|2205126_2205582_-\|Redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	2.17815e-84
CP027758.1\|AZE77822.1\|2219908_2221801_+\|Penicillin-binding-protein-2-(PBP-2)	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
CP027758.1\|AZE77814.1\|2206037_2207141_-\|Transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.11554e-123

>CP027758.1|AZE77821.1|2212862_2213750_-|Threonine/homoserine-exporter-RhtA
MTPPPRGLACALFPVGLLLIAMASIQSGASLAKSMFPIVGAQGTTTLRLIFASVIMLLLLRPWRAKLTAKSLRTLIIYGMALGGMNFLFYMSLRTVPLGIAVALEFTGPLAVAVYASRRAVDFLWIALAVIGLLLLIPMGETSSGIDWAGAAYALGAGVCWALYILFGQKAGNDNGIQTAALGVMIAALFVAPIGIVHAGAALLTPALIPIAIGVAILSTALPYTLEMVALTRLPARTFGTLMSIEPAFGALSGLFFLNEHLSLAQWLAITCIILASVGATLTMRNESKPLVPAD
>CP027758.1|AZE77820.1|2212419_2212701_-|putative-lipoprotein
MKRILILLLVVGIVGCAATTKTEVKRGKKGLHINCSGLSSSWDQCYTSAANSCGAKGYRVIAKSGDNSEEPGDYPFGLNPAGYTSRSMIVICK
>CP027758.1|AZE77819.1|2211576_2212308_-|Short-chain-dehydrogenase
MTHNKKIVLVVGAGDATGGAIAKRFAREGYIACVTRRSADKLQPLVDSIQSAGGEAHGFACDARKEEDVIALVEKIETELGPIEAFVFNIGANVPCSILEETPRKYFKIWEMACFSGFLNAREVAKRMVTRNRGTLLFTGATAGLRGAAGFAAFAGAKHGIRALAQSMARELGPMGIHVAHVVVDGAIDTDFIRENFPQKYALKDQDGILNPDHIADNYWYLHSQPRDAWTFELDLRPWNEPW
>CP027758.1|AZE77818.1|2210950_2211541_-|2-hydroxychromene-2-carboxylate-isomerase-family-protein
MSKTLEFFFDLGSPATYLAYTQLPALCAETGAQLVYQPMLLGGVFKATGNASPIMVPAKGRYMLDDLARYAKRYNVPLRFNPHFPINTLVLMRAITGMQIHQPERFLDFIDCLFRALWVEGRHLGDPEVLASVLSEHGFDPGQVLALSNDETVKNALKDNTEQAVKRGVFGAPSFFVDNQLFFGQDRLDFVREALS
>CP027758.1|AZE77817.1|2209104_2210913_+|Xaa-Pro-aminopeptidase
MSTQPLTHGTVPQRLAHTRELMRREGIHALLVPSADPHLSEYLPGYWQGRQWLSGFHGSVGTLIVTADFAGVWADSRYWEQATKELKGSGIELVKLQPGQPGPLEWLAEQTPEGGVVAVDGAVMAVASARTLGSKLAERGACLRTDIDLLNEVWQDRPALPNQPIYQHLPPQATVSRGEKLAALRASLKDKGADWHFIATLDDIAWLFNLRGGDVSFNPVFVSFALINQQQATLFVALGKVDAELRAVLEQDGVTLRDYSDVADALRAVPSGASLQVDPARVTAGLLENLDAGVKLVEGLNPTTLAKSRKSLADAEHIRQAMEQDGAALCEFFAWLDSALGRERITELTIDEHLTAARTRRPGYVSLSFNTIAAFNANGAMPHYHATEEEHALIEGDGLLLIDSGGQYLGGTTDITRMVPIGAPSAEQKRDCTRVLKGVIALSRAHFPKGILSPLLDAIARAPIWAEGVDYGHGTGHGVGYFLNVHEGPQVIAYQAAAAPQTAMQPGMITSIEPGTYRPGRWGVRIENLVLNREAGKTEFGEFLKFETLTLCPIDTRCLEPSLLTADEREWFNAYHAEVRERLSPLLSGAALEWLQVRTAAI
>CP027758.1|AZE77816.1|2207894_2209055_+|Cysteine-desulfurase,-IscS
MNKRPLYFDYAATTPVDERVIQVMVECLGFNANFGNPASSSHAFGQAARHTVEQARRQVAELVGAQPEQIVWTSGATESNNLALKGVAQARGVAGGHIITSQIEHKATLDTARQLQDAGVAVTYLVPDAHGLISVDAVSEALREDTFLVSLMLVNNELGTLNDIPAIGARVREHGALFHVDAAQGAGKVAIDLAQWPVDLMSFSAHKLYGPKGIGALYVGPRAQQKVLAQIHGGGHEGGLRSGTLATHQIAGMGTAFALAAASFADEKATIVALRQRLLDQLASVAGLRLNGSPTQRIPHTLSLTFSEGEFNSAALSAGIAFSATSACNSASNTPSHVLLALGHDLRSAGRTIRLSLGRFTTEQDIDEAARLIKAALASAPAFWAV
>CP027758.1|AZE77815.1|2207390_2207660_+|putative-lipoprotein
MNRLLAVSFLLVTSVLAGCATQPSPELRPYTAEETRQLALEALGRRGLSFDDYQRQRAALLGQPQQPFGFDHQGEMNAERSVVLHGRPS
>CP027758.1|AZE77814.1|2206037_2207141_-|Transcriptional-regulator
MQLLTLPPSPALATSIRATAQVFEDPKSQALLEHIRQVAPSEASVLIIGETGTGKELVARHIHNLSARRNRQFVAVNCGAFSESLVEAELFGHEKGAFTGALCAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVLAATNVQLEKAINAGRFREDLYYRLDVVSLELSPLRERPGDILPLTRHFIETYSRRLGYGLVTISREAEHKLRSYSWPGNIRELENVIHHTLLTCRNGVIERDDLRLSNLRIERQDDSRHGLDNSAEALLARAFQKLFGEQAGALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNKRRPGENLQGERMLHLSI
>CP027758.1|AZE77813.1|2205683_2206049_+|Chromosome-segregation-ATPase
MQLSEKNRSFTQLIEFHIEPRQQSALVAALATQSERLADGHGGFLSASVQVSDDGRRVLNYLQWQSREAGEAAFKCFEQGDADFWTLIRAHQATAVTFGSFQVLRSFERSQDDALHCRLNG
>CP027758.1|AZE77812.1|2205126_2205582_-|Redox-sensitive-transcriptional-activator-SoxR
MLNKELSVGQLAARSGVAVTALHFYESKGLIKSNRNAGNQRRYPRDVLRRVVVIKIAQRLGIPLATIGEALQALPDGRTPNAHDWERLSALWREDLDERINKLMLLRDKLNGCIGCGCLSMQACPLRNQDDQLGERGPGAQLLEPTLDAEL
>CP027758.1|AZE77822.1|2219908_2221801_+|Penicillin-binding-protein-2-(PBP-2)
MPEPIPIKDHEKENRLVNKRLLACALLVIGITCALVGRLYFLQVVQYDYHSTISENNRVHVLPITPTRGLIYDRNGVVLADNRPSYNLTITRERTTDLKGELDAIVNMLHLPAEDRAVFDKALKQARHPFVPVTLFYELTEEQIAVLAVNEFRLPGVDVEPQFVRHYPLGAHFAHSIGYVGRINEKESKTLDSVEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDPIPGKNIVLSLDVKLQEAAEEALGDRRGSVVALDPQTGEVLAMVSKPSFDPNLFVTGISFKEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTPQTRVFDPGYYQLPDFDHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYLAEFGLGQKVSLDMFEESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHLAKTINGVPPVDENPMPNVVLKDPRDWEQVNHGMQLVMHDPRGIARAAAQGAQYRIAGKSGTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPAEHPKIVISVMIENGEAGGRVAGPVVRQIMDAWLLDQEGHLKAQYATPAKAPGDPRV
>CP027758.1|AZE77823.1|2221802_2222177_-|ADP-ribosylglycohydrolase-family-protein
MCKAVRYQVDSLDMPISHCHCESCRKAHAAAFVATAGVMREHFRWTQGEKLLSSFESSPGKRRHFCSRCGSHLIAERGHQPHVIVRVATLDDDPGTRPTSHIWTSHEVPWLAYDGVERWDEWMA
>CP027758.1|AZE77824.1|2222303_2222771_+|hypothetical-protein
MHVLDRIERKVLLNASRKQVWEALTQAEQFGHWFGIALKGKTFVAGETIEAPITYPGYEHVVWKARVERILPQTLFSFWWHPYAVEAGVDYDEETPTLVEFTIEDRAPGILLRVVESGFDNVPIARRQKAFKMNSRGWDEQMGNIENYLSETPPK
>CP027758.1|AZE77825.1|2222813_2225033_-|Ferrichrome-iron-receptor
MPICNAPTVPFRPTLLALCCSLSFAAQAAPPAGADNALELGATSINAEAPAPTALPPEFAGGQVARGGQLGVLGNQDIMDVPFSMSSYTEKLIRDQQAETVGDVLLNDSSVRQASGYANQSQTFMIRGLPLNGDDISYNGLYGILPRQIISTDALERVEVFKGPNAFINGVTPTGSGIGGGVNLQPKRADDVPLRRFSTDISSDGRVGEHLDIGQRFGEDNQFGARVNLSQREGDTGIDDENQRSKLFAVGLDYRGDALRLSGDFVYQKQRINGGRNSVFLGKITHVPDAPSADTNYAPNWSSTNLEDTLGMLRAEYDLNENWTAYAAAGAKHSREMGRYSSVTLSDNFGNALASRSTIAHEENNRSAMGGLNGKFQTGAVSHRINFGLAGIWTEARNAYVFNAAATSTPTNIYNPVTGAPPTLNSPRNTPGTDFSDPTITGKTFVRSAAVSDTLGFFDDRLLVTLGARRQQMVVQSYNYMSGSRTANYDESITTPVYGIVFKPWEHVSLYANRIEGLAQGPTSPLKSGELTVIGGGQAYAPARSKQIEAGVKVDMGTYGATLGVYRIEQPGAGYAEAIDATTARYVREGEQINKGVELNVFGEPVSGLRLLGGVTLMKTELKGTLNGANDGNRAIGVPSFQLNAGVDWDVPGLQGVTLSGRMLRTGGQYADAANNLSLPAWNRFDVGARYTFTLDEREVTVGATVENVANQKYWESAQGGFLSQGDPRVAKLSATIDF
>CP027758.1|AZE77826.1|2225251_2227609_+|DNA-polymerase-II
MDLQQGFVLTRHWRDTPAGTEVSFWLATDHGPRCIRLPAQTSVVFIPEAYRKPLDWLLKGERDLELRPLQLCDFHHRPVLGLYARQHRQLMDIEKRLRAAGVDVYEGDVRPPERYMMERFITAPVWFGGTPDANGTLVDAQMKPAPDYRPQLKLVSLDIETTAQGDLYSIALEGCGERQVYMLGPPNKPGAVDFKLDYCDTRAQLLERLNQWLVTFDPDAIIGWNVVQFDLRVLHEHAQRLNVPLLLGRGGEPMTWREHGSRNHYFAAAAGRLIIDGIEALRSATWSFESFSLENVAQTLLGEGKDISTPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFAKTELLKFLLERASVTGLPADRSGGSVAAFTHLYMPLMHRQGFVAPNLGDKPPQASPGGFVMDSRPGLYESVLVLDYKSLYPSIIRSFLIDPVGLIEGLKHPDDSESVEGFRGARFSRTRHCLPSIVTRVSEGREVAKREHNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHQIMRQTRELVEAQGYEVIYGDTDSTFVWLGSAHAPEDANRIGLALVQHVNDWWRTHLSNEYGLQSALELQYETHFSRFLMPTIRGAEEGSKKRYAGLVVRDDGSEEMVYKGLETVRSDWSPLARQFQQELYQRIFHRLPHQDYIRDYVRRTLSGEFDELLIYRKRLRRPLHDYERNVPPHVRAARLADQYNDRLGRPRQYQRGGWISYVISVNGPEPLEVRQAPIDYDHYVTRQLQPVADAILPFVNDDFGTLVGGQMGLF
>CP027758.1|AZE77827.1|2227682_2228315_+|putative-GST-like-protein-yncG
MFTLYGTDESGSCMIEIALQRCAVPWHRVDASSWQEGEGSDALARINPLKQIPTLVTPDGQVLTESAAILIHLGLEYPEAELLAGNRTQILRGLLYIAANCYSAIGIIDYPQRWLGNADEALQAQLIAGTRRYLHQAWVVFAEQFADQLFTPTGVPNALGIMAAAVSRWDEAREELARLAPGFAQTLERVDADPVVAPVFARHWPQWKVS
>CP027758.1|AZE77828.1|2228468_2229047_+|hypothetical-protein
MLIRSLTLATLMAFTGPLLAADDIDPLKQDLGKARPLVVVELDSGNDTLATLRKQLDEPATKQSFEERSMVLYTVKFGSIGAEGEKFAKEAKDNKKLTPPETNALIRALKLGAGSGTKVILIGKDGEKKLEKTVPPDTLDLKAFFSAIDQMPMAEKEAAAPTAPVAPEPAPGKNAPKAGKAAKQAAPQQLDD
>CP027758.1|AZE77829.1|2229101_2230514_-|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslK,-MATE-transporter-family
MFGSTLWLTLVTLAGLVAGFAREWLLVAAWGAGSRSDGFLVAVFLPEALRMTLAAGLLAAAALPLYQQRDPQRQQAWLASLSPRLLGVGLGLFAVLALGAPLWVRLIGPGLDAAAHAEAAANLRWLAACAPGLVMHALFSIPLQARQRFVLPGLGSLLFNLPPVLYLFIRGSASDSAELAMCFFAGSVLMCLPLLAPVWSFGWRPWQVTGEALAGRELLGRIGPLLASNVASQGLALLERLIASYLGEGAVTWVNLARKLINLPLIALMSLNQVLLGMMSGEQGQQRLALLRRGLDAATLLSLPAALGLIGASPVLIHLLMPAQSADGPLPALLAWFATPLVFGAWNAMLARYAYAGGDTRLPLRCELLGSVINATLLLLLPYFFGLPGIALAALGGVVVTNLLLMQRQQLLGQLGWPLQWGLSAVLLGFAAVILHPLHNDGWQLGLSTLTGALALGGLAGWFKPWKSVK
>CP027758.1|AZE77830.1|2230513_2231335_-|Transferase-hexapeptide-repeat
MKHRIIHSTDLRDRLPTLAGELGVSLPDLEEALDWCLANDVVFEDGEGENKRFWISSIDLEPALEHPVARRLFHRLKQDLPCQLLPRYGKNWATIKDRWRNAWDMAYNILINKIPSHHVRIAWLRLGGAKIGKGSSLWRNTEVLGIHNLVVGDDSVIGWHCQVDARAGLVIGNHVAIASHVLIIAGSHDLQAPEFWSISGSIYIDDYVWIGSRALIGFGTHLGHGSVISANTVVAKAVAPYKIIGGTGAKIMGERCHDLNYKVGGKGLFTLFH
>CP027758.1|AZE77831.1|2231331_2232735_-|Pellicle/biofilm-biosynthesis-inner-membrane-protein-PslJ,-possible-O-antigen-ligase
MLPGKFVSLLLGLVFGGLLLALSPIKVLLVVAGMGVALTLIRFPLWGLLIFAVLATSIPYTTLELGIRTTVSEAVLGLTWVGVFWQSFIGKTRGLILWRPTERALMWLMLFSTIPFIWGMVIIHAEGNGPVNWVRWLMNLSLLFIVPLLLRTDADRDKVVVALLLGNLAMLLLSIFMFLKTRNAMSMIDILTDLKYAHPEAVKDIFSANYTRMASPWVHPNLTGGVLVLFIPLALFYGWTRSGWRRALGLAVAVLGCAGLLLSISRGAIVALALVLIWLTYKRVPNSGRIIGIGLAFGIALVMFYPPLQERLMTIFSTTNASTEIRFDEYARFPDAMSKFPLGIGFKIDPPVPGSNLLGISNLWLNFIYKVGIPGMLLFITVTVLWWREVRPLGQVRKVTADNALWLGCICGVLAALLTGIFDHYFSFTFVLIALFWLLMGMSLQQVRLRPTVTATVPVIAPKDDQP

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Crispr_ID: CP027758_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027758_3

2818311-2818414

Orphan

Consensus_repeat	Method
ATGTGGGAGGGGGCTTGCCCCCGATGGCGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027758_3

>merge|CP027758|3|2818311-2818414|CRISPRCasFinder
ATGTGGGAGGGGGCTTGCCCCCGATGGCGGCCTCACAGCCGACCAGTATCTAACTGACGGTCTCGGTCCAAATGTGGGAGGGGGCTTGCTCCCGATGGCGGCCT

>CP027758|3|3|2818311-2818414|CRISPRCasFinder
ATGTGGGAGGGGGCTTGCCCCCGATGGCGGCCT	CACAGCCGACCAGTATCTAACTGACGGTCTCGGTCCAA
ATGTGGGAGGGGGCTTGCTCCCGATGGCGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
CP027758.1\|AZE78326.1\|2831616_2832063_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP027758.1\|AZE78309.1\|2812048_2812291_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378527
CP027758.1\|AZE78318.1\|2820160_2823337_+\|Multidrug-efflux-system,-inner-membrane-proton/drug-antiporter-(RND-type)-MexQ	unknown	unknown	gnl\|CDD\|223911
CP027758.1\|AZE78313.1\|2813946_2814954_+\|putative-periplasmic-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270359
CP027758.1\|AZE78311.1\|2812701_2812977_-\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE78321.1\|2826082_2827069_+\|3-oxoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|379634
CP027758.1\|AZE78315.1\|2817296_2817686_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371400
CP027758.1\|AZE78317.1\|2818997_2820164_+\|Multidrug-efflux-system,-membrane-fusion-component-MexP	unknown	unknown	gnl\|CDD\|273776
CP027758.1\|AZE78307.1\|2811239_2811644_+\|DksA-family-protein	unknown	unknown	gnl\|CDD\|274124
CP027758.1\|AZE78314.1\|2815075_2817202_-\|Outer-membrane-vitamin-B12-receptor-BtuB	unknown	unknown	gnl\|CDD\|238657
CP027758.1\|AZE78324.1\|2830003_2831077_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
CP027758.1\|AZE78316.1\|2817779_2818217_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372505
CP027758.1\|AZE78322.1\|2827099_2828518_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176469
CP027758.1\|AZE78308.1\|2811843_2812047_+\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE78323.1\|2828517_2829966_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176469
CP027758.1\|AZE78319.1\|2823333_2824785_+\|Multidrug-efflux-system,-outer-membrane-factor-lipoprotein-OpmE	unknown	unknown	gnl\|CDD\|273830
CP027758.1\|AZE78310.1\|2812360_2812591_-\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE78325.1\|2831197_2831527_+\|Valyl-tRNA-synthetase	unknown	unknown	unknown
CP027758.1\|AZE78312.1\|2813345_2813816_+\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE78320.1\|2825046_2826042_+\|3-oxoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|339254

Protein	Function_ID	Function_description	E-value
CP027758.1\|AZE78326.1\|2831616_2832063_+\|acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.31105e-10
CP027758.1\|AZE78309.1\|2812048_2812291_-\|hypothetical-protein	gnl\|CDD\|378527	pfam10982, DUF2789, Protein of unknown function (DUF2789). This bacterial family of proteins has no known function.	8.85761e-33
CP027758.1\|AZE78318.1\|2820160_2823337_+\|Multidrug-efflux-system,-inner-membrane-proton/drug-antiporter-(RND-type)-MexQ	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP027758.1\|AZE78313.1\|2813946_2814954_+\|putative-periplasmic-substrate-binding-protein	gnl\|CDD\|270359	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.14234e-117
CP027758.1\|AZE78314.1\|2815075_2817202_-\|Outer-membrane-vitamin-B12-receptor-BtuB	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	4.07791e-73
CP027758.1\|AZE78321.1\|2826082_2827069_+\|3-oxoacyl-ACP-synthase	gnl\|CDD\|379634	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme. The CADD, Chlamydia protein associating with death domains, crystal structure reveals a dimer of seven-helical bundles. Each bundle contains a di-iron centre adjacent to an internal cavity that forms an active site similar to that of methane mono-oxygenase hydrolase.	8.91652e-14
CP027758.1\|AZE78315.1\|2817296_2817686_-\|hypothetical-protein	gnl\|CDD\|371400	pfam11162, DUF2946, Protein of unknown function (DUF2946). This family of proteins has no known function.	2.2666e-07
CP027758.1\|AZE78317.1\|2818997_2820164_+\|Multidrug-efflux-system,-membrane-fusion-component-MexP	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.32484e-78
CP027758.1\|AZE78307.1\|2811239_2811644_+\|DksA-family-protein	gnl\|CDD\|274124	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA. The model that is the basis for this family describes a small, pleiotropic protein, DksA (DnaK suppressor A), originally named as a multicopy suppressor of temperature sensitivity of dnaKJ mutants. DksA mutants are defective in quorum sensing, virulence, etc. DksA is now understood to bind RNA polymerase directly and modulate its response to small molecules to control the level of transcription of rRNA. Nearly all members of this family are in the Proteobacteria. Whether the closest homologs outside the Proteobacteria function equivalently is unknown. The low value set for the noise cutoff allows identification of possible DksA proteins from outside the proteobacteria. TIGR02419 describes a closely related family of short sequences usually found in prophage regions of proteobacterial genomes or in known phage. [Transcription, Transcription factors, Regulatory functions, Small molecule interactions].	9.92716e-28
CP027758.1\|AZE78324.1\|2830003_2831077_+\|SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	1.87138e-16
CP027758.1\|AZE78316.1\|2817779_2818217_+\|hypothetical-protein	gnl\|CDD\|372505	pfam13160, DUF3995, Protein of unknown function (DUF3995). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 149 amino acids in length. There are two completely conserved residues (W and P) that may be functionally important.	3.31011e-19
CP027758.1\|AZE78322.1\|2827099_2828518_+\|hypothetical-protein	gnl\|CDD\|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	0
CP027758.1\|AZE78323.1\|2828517_2829966_+\|hypothetical-protein	gnl\|CDD\|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	5.47381e-178
CP027758.1\|AZE78319.1\|2823333_2824785_+\|Multidrug-efflux-system,-outer-membrane-factor-lipoprotein-OpmE	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	4.63909e-71
CP027758.1\|AZE78320.1\|2825046_2826042_+\|3-oxoacyl-ACP-synthase	gnl\|CDD\|339254	pfam14515, HOASN, Haem-oxygenase-associated N-terminal helices. This domain represents a pair of alpha helices, which are found at the N-terminus of some Haem-oxygenase globular domain.	5.46243e-26

>CP027758.1|AZE78316.1|2817779_2818217_+|hypothetical-protein
MSFVIARWIVGVFTFISMVHLYWAAGGKFGSLAAIPQLPGEFASGPRPAFKPSALGTFLVAMGLVAIALLVCLRAGLYFTPVSHGALQWGISAIAVLFFARAIGDSELVGFFKKVGGSRFARLDTYLYSPLCLVLGAGLLVVAWT
>CP027758.1|AZE78315.1|2817296_2817686_-|hypothetical-protein
MKLARADRSLIAWMLYCCVLFNVFACSIGHGQMVGMQLNGISGQFCTVDPRTQAPLQNNSTDENLPTLSKAFGCPLCSTGGMGPALNSHLNVAVLPQPHAPPAAIVLAADIPARFTWPTANPRAPPALA
>CP027758.1|AZE78314.1|2815075_2817202_-|Outer-membrane-vitamin-B12-receptor-BtuB
MKHLPLLAGLFGCLPVCAPALELAPTTIEGEQSVEPGLALDQPSGMASRLGLSVRETPASVAIANRNDIERHGAKTFRDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGINVATGLARPVDAWVYDRVELVGGPSSLINGAGSVGGSLNYVTKLASREEQAVEGQLTYGSYDTAGMAFGLNHALTEPGAEVQHYARLDVSRNTNHSYIDRDQRDAWSVAFSLLSDLTPDLSHTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVADGRYEQRTIWARSIIDYRINDSTTLKNTLYHLDSQRDYRNLETYQYNADNSAVNRSTAYQVRHQGQQNGNQFELRHDNRIFGLSTTWSGGFEYKVNSTTNNPLNVPGKSTVDPNNYDPGHFYDIPGTRPGFVKDKTNQVTTKALFVENRLGLTDKLSLLTGLRYDAIDMDVTNHRSVTAANPRHFKRSWEPLTGRVGLTYQFIPSANVYVQYSTAVEQPNTTIQVFDVSTGKQWEIGSKFDYLDGRGSATVAAYKIERKDFAVTDPLDPTNSIPVGAQSSKGIELASSLRITPRLLAEGNFAWVDAEYDEFNEKMASGAVVSRKGNTPTNVPRRVGNLWLTYDFSEDWQGGVDARYVAQVYADNANTQTVPAYTLFGTFLRYRLDAHTSVTGRVRNLTNEVYAEFAHVSPAYYLGSPRTFEVAVQTKF
>CP027758.1|AZE78313.1|2813946_2814954_+|putative-periplasmic-substrate-binding-protein
MKGLKSLLAASLTALSLSLPVSGAQAPVHFADLNWESGSLITEVLRFIVEKGYDLPTDTLPGTTITLETALAKNDIQVIGEEWAGRSPVWVKAEAEGKVVGLGDTVKGATEGWWVPEYVVKGDPSKNLKPLAPDLKSVKDLARYKDVFKDPESPDKGRFLNSPIGWTSEVVNKQKLKAYGLDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFDADAWKTLTDADNPDPKPTRSLASKLSIGVSTPFQQEHPQIAQFFEKVEFPIEPLNKALAKMSENHTAPREVAQAFLKEHPEVWKAWLTQDVAQKVEASLK
>CP027758.1|AZE78312.1|2813345_2813816_+|hypothetical-protein
MAVSNLDMHALFVLGDLRAKLVKQFQSRFVYVTEQTPEGIYIAEIDTETALVVDDKPRLELKVGDHFRAAVLPSREGGKFELKFRDIKLTVYGLGDYAFVSSAEGQGIVFKEGHSVMLVFAAHEQLQEGLTKTLKAVTGKAAKWRKGELVTFKASE
>CP027758.1|AZE78311.1|2812701_2812977_-|hypothetical-protein
MQRRQHDAASFHKRSSWSEERQYYCLHNADGYSNSVIYQVVPAGKNFFHILEVPSGRIKGFRSDHNKACELAKTLEAKLQALCDTLVSSPG
>CP027758.1|AZE78310.1|2812360_2812591_-|hypothetical-protein
MTEFDIGEFFIHGDAREVDGEFQAVIVMRAKPPLTTVTTHQVEKDRWFKTVDAAANAAKDAAKALKAAVDSGALTS
>CP027758.1|AZE78309.1|2812048_2812291_-|hypothetical-protein
MDTTTPTLETLFDQLGLDSSQEAIERFTAEHRLPDDVKLIDAPFWSEQQASFLKEQLHVDAEWAPAVDDLNALLHESPKE
>CP027758.1|AZE78308.1|2811843_2812047_+|hypothetical-protein
MQNKVDVAVMIGSGVPETLRALGQKACWVVLLNGEQRGTAFASRDEAEECRTAWQALLRMERSDSLH
>CP027758.1|AZE78307.1|2811239_2811644_+|DksA-family-protein
MTKEKLLAMPADDYMNAEQHAFFEKLLQDMKVEHHERIEQNRIAIESLDTPADPADAASVEEERTWLVNAIDRDQRMLPQLERALERIKEDSFGWCDDSGEPIGLKRLLISPTTKYCIEAQERHEQIDKHQRQA
>CP027758.1|AZE78317.1|2818997_2820164_+|Multidrug-efflux-system,-membrane-fusion-component-MexP
MYAKPISLITGAMAVVLTLGGCTDNAPPAAAAKPPGVPVAEVVARAVTPFVEYTGSLTAIDQVELRPRVSGYLQSVSVPEGQFVARGSPLFVIDPRVFQAALNAAKARLREAEANAVLAQAEHGRAEQLFAKKVVARDRLDTAIASLNAGRAQVEAARAALDAAQLDLGYTRVTAPISGRIDRALVTEGNYVTQGVTALTTIVSIDPLHVYFDVDERTYLHSLAATREHAGSKGEKAAKVMVAMLNDTTYARAGRVDFLANAADRKTGTVRVRAVVDNPDRRLTPGLFAKVKLDTGAAQPRVLIADQSIGTDQGRRYVLVVGEGNKTEYRPVELGPVVDGLRVVEQGLQPGERIVVKGLVRPGMQVTPLAASIEGKPLEAPLTVGGVQ
>CP027758.1|AZE78318.1|2820160_2823337_+|Multidrug-efflux-system,-inner-membrane-proton/drug-antiporter-(RND-type)-MexQ
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIAETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFTQGTNADMAQIQVQNRVSRALPRLPEEVQRLGVVTQKTSPDILMVVHLLSPDKRYDPLYISNYAYLQVRDELSRLPGINDVLVWGAGEYSMRLWLDPDLIAARGLTAGDVIAAVREQNVQVAAGSVGQAPDSSAAFQVTVNTLGRLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGANALDVAQAVRDTMQRLQANFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVFLRNWRASLIPLMAVPVSIIGTFAVMYLMGFSLNTLSLFGLVLSIGIVVDDAIVVVENVERHIENGEEPTQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGLLLRPRGAAVVHDPRSLRGRAAHLLELLGRPFQRAPQAYGSTVRKVVGRRGVALVAYCGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNSASLDRTDAVVRQMSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKQRTSPDMAAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLEALVQQTQVLMTKATESGQVAGLMSSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQADADHRMQAEAIGRLQVRNAAGDMLPLSAFVTVTPGSGPDRVIHYNGYPSADISGGAMPGVSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYNSWLLPLAVLLIVPMCLLSAIIGVWLVDGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLEAEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASGAGAEMRHAMGVAVFAGMLGVTLFGLFLTPVFYVVMRSLALRVERQGSSPKLQLEERAS
>CP027758.1|AZE78319.1|2823333_2824785_+|Multidrug-efflux-system,-outer-membrane-factor-lipoprotein-OpmE
MRLSYPVLLLPLLLMAGCASVGPDYSAPVLPAAQRPASFGAPVAGLGTGEAEAQWWQVFDEPALSQLIQQALAANHDIGIAAARLDEAKAMLRESRQGFLPSGGAALGYEHRRRSEVETPYGEQRSIETTRAALDAAWEIDLFGSVRRSVEVAQAQAGSRQALLRSVQASVAATVAATWFELQGIEAEQAVVADISQSQRDSLGLVEHLVSVGAATEFDRLRAEALLRNVEAVAPDLERRRATSTNALAVLLGQAPQGFKPPQARPGRESLSLRTLQVGDPAGLLARRADIAAAERTLAAETAQIGVETAGLYPDIQVQGSIGLLAGSLGSLGDAGMQSNFIAPVIRWSLLDTGRVRARIAASEARTQAALIAYDQTVLRALQETDDAFQANSAAGSTLGLRLLEAAANREAARFARTRFAEGEGMYLDVLEAERADFTSRRALTAARTQQRLAVVGIYKALGGGWLICEQAGQACSGAAALR
>CP027758.1|AZE78320.1|2825046_2826042_+|3-oxoacyl-ACP-synthase
MDTAALQQRPDSDLFTTASTLMVNALEPGAHYAQVTRALEALLALTRQGLSGDADAYAHYQAALLQLHIPGDPRTEPTRRWMASEVYRVEDEFAADLPGFTALPVDEFRQLVDAEIAARSRVNHPMSVHLFQGTPPVQDVRFFLEHHWTRSYNFYSLLAELAFRFEAIEDASVFYRNLYGEAGAETPQRSHPAMLAHLMEYFDIPLAIDFPALHPLEKAYLNNRIRCVRHTDVAWGLALLYAVESVSCVNHRRIYELLQRLDVPEQPSEFHRLHGTQDEIDTEEMWALIAKFAGDEGFQRTFMRALKRHFEINKAYFDSLWQQMQAQRLPA
>CP027758.1|AZE78321.1|2826082_2827069_+|3-oxoacyl-ACP-synthase
MSPRNFSQPQLQNIHTAEARLLAEALKPDATFNRIEIAANMLRALCESGQRGDAANAAQCQQLLYILSLSDDVATASTRRWLANAIYSVQERFMPSADLASPLSEAAFQQRLEEQIAAQSRENHPMSQYVFEGKASREQLQVFLRHQWFRTYRLYRDAADLLVNLTDVDEAAALGRYLYGELGEEDEQRSHPRLLAKLLAAIGLTADFEAISTMPEEIAYLNNRARCFRNPDVGWGLAVFYITELVVPGNHGKLYNALRNAGLSQDDAEYYEVHISLVPPRAKREWALIARRIPDLGFQNAFLTSLAEHFRLERAYYDAVWEAMQRVK
>CP027758.1|AZE78322.1|2827099_2828518_+|hypothetical-protein
MPSHITESRIHGGAYSSPEFAAIFSDTSQVQKWLDVETALAATQAQMGIIPHEAAREIARVASVELLDLDALGRQSMETGHILVPTLRALEALCADGWGEYVHYGVTTQDILDTGLILQVRDAWGLVLQRLHAIRGHLLTLALRHKHTPMVARTHGQQALPTTFGYKVAVWVDEIDRHLERFDEAYARVMVGNLTGAVGTLAALGPQGLEVQRRTLESLGLGAPLSSWHSARDRILEAAWLLVQASATLGRVANEIYHLQRTEIDEVREGRRPGQVGSSTMPHKQNPSTVDLISALSRLVRAQMLALTDAAFQLHERDGTTWRIEWAALPELFIYAGALLARMEGVLLAGLDVRETRMRSNLDMLGGLILSERIMLALAPRFGKQTAHQLVHEIAQQAQVEGRPFREALLSDSRLHGCFSRQVLDDLLDPAAYTGLAADMVDLVANKAIPRLEGLVETQGNTGQSQYAMEGM
>CP027758.1|AZE78323.1|2828517_2829966_+|hypothetical-protein
MDAQTLEMAARASCTARSEHPGLGHDGEQCRHEHSHILDSKTHGSGYAGPQSRKIFCSHCRLQRWLDVEAALAMAQADVNIIPREAALDIEKAALLSGINVRQLADGVAATGHSLMPLLSALQKNCSPSAREYVHYGATTQDIQDTAQSLEMRDVLDAMDQALETLLGKLSTLADAHRDSLMVARTHSIPALPTTFGLKVAGWIDELLRHRQRLAEARQRVLVVQLFGGVGTMAAFGPEAIPMLERFAERLSLQVPLTGWHVSRDRVAEFVSTLAMVTASLARVADEIRTLNRWEIAEVEVGWSDQQIGSSTMPHKRNPEGCEQVVVLARLAKAQVMLALDAMILEHERDYRGTRLEWCAVADVSHYALMALSILTDTIDGLTVNVQKMECTAHAYGDAICTEAVVFEMARKLGKSSAYEIIFEVSQASQRNHVSIRTAIEADARVVAAIDTGALARLFEPRTHLGMSDRIVDNVLSKLAAR
>CP027758.1|AZE78324.1|2830003_2831077_+|SAM-dependent-methyltransferase
MSNVMAVDKAKVQQFSARIMEDYGNTLRGAMLYIGDQLGLFKALADGEAVTLEELAQKTGYNARYLREWLGSMVTGSYVTYDAPTRRYQMPAEFVPVLADEDSPYFAGGIIQLSVPFVSMAPKVIEAFRNGGGCAEEAFPLETWKGMERMTMPWYKHYLVQHWIPSLDGVEEKLKTGGSVLDFGCGAGLAAITMAKAYPEARIVGCDFHLPSIELARANAEAAGVGDRVQFEVNDSDALRGQQFDFVTTFVVIHDATDPQQMLKDLRAATAADGTYLMVELNLSEELHENMNLFGRVMYPQSTLYCMTCSLSHGGAGLGAFMGEKRARQMAQAAGFSHFRKVPSEWPPMPALFELKP
>CP027758.1|AZE78325.1|2831197_2831527_+|Valyl-tRNA-synthetase
MRTVGMMLIACSLAGGATAVQARELREGDKYMCSWGAGTAARAQELKLSGVSLYAARQKIQSIKFNKSWMRMMAMGITEQTYDSRSRLKPEAIRKSFYQDCLRYKVARK
>CP027758.1|AZE78326.1|2831616_2832063_+|acetyltransferase
MQVLIRAATADDVDTLCAIRTAVVQNHLSLEQMADLGITPQVLVDTLSAAPCAWIAEVDGQAAGFSMVDLAEGEVFAMFVLPTHENLGLGRQLMALAEAALFEHHDRLYLVTDGRDDIRANGFYQRLGWSVVGRVEGDEVRYEKGRAR

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Crispr_ID: CP027758_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027758_4

5066613-5066712

Orphan

Consensus_repeat	Method
CAGGCCGCCATCGGGAGCAAGCCCCCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027758_4

>merge|CP027758|4|5066613-5066712|CRISPRCasFinder
CAGGCCGCCATCGGGAGCAAGCCCCCTCCCACATTGGGACCGAGGGGCGTCAGGTAGATAGGCGTCGGCTGTCAGGCCGCCAGCGGGAGCAAGCCCCCTC

>CP027758|4|4|5066613-5066712|CRISPRCasFinder
CAGGCCGCCATCGGGAGCAAGCCCCCTC	CCACATTGGGACCGAGGGGCGTCAGGTAGATAGGCGTCGGCTGT
CAGGCCGCCAGCGGGAGCAAGCCCCCTC

Protein	Signature genes	Signature genes Name	Protein_function
CP027758.1\|AZE80352.1\|5060524_5061205_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
CP027758.1\|AZE80363.1\|5071997_5073530_+\|AmpG-permease	unknown	unknown	gnl\|CDD\|341039
CP027758.1\|AZE80350.1\|5059576_5059804_-\|hypothetical-protein	unknown	unknown	unknown
CP027758.1\|AZE80349.1\|5058303_5059404_+\|putative-exported-protein	unknown	unknown	gnl\|CDD\|226021
CP027758.1\|AZE80364.1\|5073730_5075446_+\|Prolyl-tRNA-synthetase,-bacterial-type	unknown	unknown	gnl\|CDD\|236405
CP027758.1\|AZE80351.1\|5059800_5060520_-\|InaA-protein	unknown	unknown	gnl\|CDD\|182136
CP027758.1\|AZE80361.1\|5070435_5071443_-\|Peptide-chain-release-factor-RF-3	unknown	unknown	gnl\|CDD\|377313
CP027758.1\|AZE80360.1\|5069600_5070332_-\|Putative-heme-iron-utilization-protein	unknown	unknown	gnl\|CDD\|223819
CP027758.1\|AZE80358.1\|5068516_5068810_-\|Heat-shock-protein-60-family-co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
CP027758.1\|AZE80354.1\|5062663_5063347_-\|Two-component-transcriptional-response-regulator,-LuxR-family	unknown	unknown	gnl\|CDD\|223816
CP027758.1\|AZE80359.1\|5069057_5069534_-\|protein-FxsA	unknown	unknown	gnl\|CDD\|236913
CP027758.1\|AZE80362.1\|5071600_5071954_+\|DNA-base-flipping-protein	unknown	unknown	gnl\|CDD\|226219
CP027758.1\|AZE80365.1\|5075466_5076420_+\|putative-lipoprotein	unknown	unknown	unknown
CP027758.1\|AZE80348.1\|5057239_5058304_+\|Iron-regulated-protein-A-precursor	unknown	unknown	gnl\|CDD\|226020
CP027758.1\|AZE80357.1\|5066820_5068467_-\|Heat-shock-protein-60-family-chaperone-GroEL	unknown	unknown	gnl\|CDD\|234573
CP027758.1\|AZE80353.1\|5061393_5062674_-\|Two-component-system-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP027758.1\|AZE80347.1\|5055768_5057208_+\|putative-thiol-oxidoreductase	unknown	unknown	gnl\|CDD\|226019
CP027758.1\|AZE80366.1\|5076549_5077647_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
CP027758.1\|AZE80356.1\|5065547_5066273_+\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|226422
CP027758.1\|AZE80355.1\|5063547_5065497_+\|Putative-sulfatase	unknown	unknown	gnl\|CDD\|293739

Protein	Function_ID	Function_description	E-value
CP027758.1\|AZE80352.1\|5060524_5061205_-\|SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00814e-17
CP027758.1\|AZE80363.1\|5071997_5073530_+\|AmpG-permease	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.62407e-52
CP027758.1\|AZE80359.1\|5069057_5069534_-\|protein-FxsA	gnl\|CDD\|236913	PRK11463, fxsA, phage T7 F exclusion suppressor FxsA; Reviewed.	6.7145e-46
CP027758.1\|AZE80349.1\|5058303_5059404_+\|putative-exported-protein	gnl\|CDD\|226021	COG3490, COG3490, Uncharacterized protein conserved in bacteria [Function unknown].	4.74323e-150
CP027758.1\|AZE80364.1\|5073730_5075446_+\|Prolyl-tRNA-synthetase,-bacterial-type	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
CP027758.1\|AZE80351.1\|5059800_5060520_-\|InaA-protein	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	6.41577e-51
CP027758.1\|AZE80361.1\|5070435_5071443_-\|Peptide-chain-release-factor-RF-3	gnl\|CDD\|377313	pfam04338, DUF481, Protein of unknown function, DUF481. This family includes several proteins of uncharacterized function.	1.95076e-53
CP027758.1\|AZE80360.1\|5069600_5070332_-\|Putative-heme-iron-utilization-protein	gnl\|CDD\|223819	COG0748, HugZ, Putative heme iron utilization protein [Inorganic ion transport and metabolism].	1.33176e-63
CP027758.1\|AZE80358.1\|5068516_5068810_-\|Heat-shock-protein-60-family-co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.57515e-47
CP027758.1\|AZE80354.1\|5062663_5063347_-\|Two-component-transcriptional-response-regulator,-LuxR-family	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.47067e-75
CP027758.1\|AZE80362.1\|5071600_5071954_+\|DNA-base-flipping-protein	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.08506e-35
CP027758.1\|AZE80348.1\|5057239_5058304_+\|Iron-regulated-protein-A-precursor	gnl\|CDD\|226020	COG3489, COG3489, Predicted periplasmic lipoprotein [General function prediction only].	9.54645e-119
CP027758.1\|AZE80357.1\|5066820_5068467_-\|Heat-shock-protein-60-family-chaperone-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
CP027758.1\|AZE80353.1\|5061393_5062674_-\|Two-component-system-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.83223e-46
CP027758.1\|AZE80347.1\|5055768_5057208_+\|putative-thiol-oxidoreductase	gnl\|CDD\|226019	COG3488, COG3488, Predicted thiol oxidoreductase [Energy production and conversion].	0
CP027758.1\|AZE80366.1\|5076549_5077647_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
CP027758.1\|AZE80356.1\|5065547_5066273_+\|putative-membrane-protein	gnl\|CDD\|226422	COG3907, COG3907, PAP2 (acid phosphatase) superfamily protein [General function prediction only].	3.71714e-70
CP027758.1\|AZE80355.1\|5063547_5065497_+\|Putative-sulfatase	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	7.97949e-82

>CP027758.1|AZE80356.1|5065547_5066273_+|putative-membrane-protein
MKSPSSLPVSKPLNFWLCLGLPAGAAVVLLLLELTSLDMDLARRFYSAEAGGFIGRYSFLLEDILHDRAKQLVILFSVLAILGLVGSFILQRLKPYRRELVCLVLSLGMATAFVSPLKTITAVQCPWSLKEFGGQETYSELLSPRPPTDKPGRCWPGGHAATGFALFAWFFALRDRRPRLARNAFIFAVSLGSVFSVSRMLQGAHFFSHNVWTAIFCWLICLDLYCLLLYRPSRQAVMPIS
>CP027758.1|AZE80355.1|5063547_5065497_+|Putative-sulfatase
MGFLKTAPMRYLLLITGAWLLVFLLTRSVLLVTHLNEVGGNWLPVFGVGMLYDLAFLAYAALPLGLYLLLCPPALWRRRGHRWFLQVLLTASLFAMLFTSVAEWLFWDEFGVRFNFIAVDYLVYSDEVLNNLLESYPIGKLLSLLAMLAILMSLALRKPFNAAMAVPLPALRSRLLNGLGLLVVAGLSLQLISQDSPRAQGGNAYKNELASNGPYQFFAAFRNNELDYTQFYKSLPADVVARQLRAELSEPNARFVDQDPLDIRRAIDNPGTLRKPNIVLVTIESFSAKYMGSNGDQRNLTPNLDALRKQSLYFNNFYATGTRTDRGLEAITLAIPPTPGRSIVKRIGRESGFASLGQQLTAIGYDSVFVYGGRGYFDNMNAFFSGNGYRVVDQSSVPESDISFKNAWGMADEDLFKQTLTLADADYAKQQPFLLQLMTTSNHRPYTYPDGRIDIKSGKGRDGAVKYTDYAIGQFLEAARQKPWFDNTIFVFVADHTAGSAGKEDLPITNYQIPLFVYAPKLIDPRESAQLASQIDLAPTLLGLINLSYESTFFGRNLLQDNPLPPRVVIGNYQHLGLFDGKDLAILSPRQGLRRHDQALGESQELRVGSDDPLIQRAITYYQAASYDYKQQLLSWKALKEEAPVLSKR
>CP027758.1|AZE80354.1|5062663_5063347_-|Two-component-transcriptional-response-regulator,-LuxR-family
MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYLLKPFALSELAARIEAVLRRAQGGGRRALQVGDLNYDLDTLEVTREGRLLKLNPVGLKLLAVLMQKSPHVLRREILEEALWGDDCPDSDSLRSHVHQLRQVIDKPFAKPLLQTVHGVGYRLAEGRDGV
>CP027758.1|AZE80353.1|5061393_5062674_-|Two-component-system-sensor-histidine-kinase
MEFKQSLAQRIIIAFALMSALVAGAFAMGIVATVHLVEEKLISAGLGGDLQRLLLMDSMEDWRHRPEPDQLFYFSGGRGDFELPKDLRHLEPGFHEVFRESLSYHAMVEVIDGRRYVLLQDQSDFEERERVLFAVVLVGFVLSLALAVFLGWVLARKVMAPVVRLARQVRHRDQLLGLAPPLAPDYAADEVGELAVAFDATLGRLRQALSREQLFTSDVSHELRTPLMVLASSCELLLENPAIDERGRRQVERIARACEEMRELVQTFLMLARAKHDDAASSPQGSLTQVAEDLLGIWREPIEKKGLELIYRPGNPLDTRYNTTFLHAVMGNLLRNALHYTEHGFIRLTLEPSGFVVEDTGVGIPEEKREAMFEPFVRGSENRGEGLGLGLSLVQRICESQGWNVSLSTMEPNGCRFHVELSQVKS
>CP027758.1|AZE80352.1|5060524_5061205_-|SAM-dependent-methyltransferase
MPSPIKLEFSEKYDDQHAQQYLLKHQDNLARRLSHKRDEQLARGALAMAGEPGLVLDLPCGAGRFWPLLAEKPNRVIIGADNSASMLKIATTAQPADVVKRVRPLQTSAFDIDLPDNSVDSIFCMRLMHHIGEPEHRLTILREFQRVTRDSVIISLWVDGNFKAWKRKRSEVRRRKRGEQEGYQNRFVLPAATVEAEFEQAGFRVQESLDFIPLYAMWRVYVLRKR
>CP027758.1|AZE80351.1|5059800_5060520_-|InaA-protein
MAVECVAGSHVAPEERFDFFWRQQGEWVEEPNRRRGGESGVQRVVGPNGRLLYSKRQTGHIYRSWLHPFGRPTVLRERDALKGLRLLDVRVPELVFCEARRDPEHQWKALLVTASLDGFDEIENWYAAGGREQYGEAVHERLLQELAGTLARMHKGRWQHGCLYIKHIFVRVTGEPEAATVEVALLDFEKCRQRLTAYRAASHDMLQLRRHSSWNDTDWKKLSYFYETAFGSAIKGLIR
>CP027758.1|AZE80350.1|5059576_5059804_-|hypothetical-protein
MKLEIARGLFLVGALGVSALALAVWEQPRTQVLSAVDGGGQCLLPRIAKASVAAKPDHELLLFMFGMSQAMKPQS
>CP027758.1|AZE80349.1|5058303_5059404_+|putative-exported-protein
MMLRRQALAVGSVLLSALTLGGWTLFKGKDKGPLLLSARDDADGKHYAVGYRLDGKQVFATQVGQRCHDIINHPTLPIALFVARRPGTESYLIDLRDGALLQTISSNANRHFYGHAVIHKSGDWLYATENDTSDPGRGLLGVYKFEGERLVHSGEISTHGIGPHQVSWMPDGETLVVANGGIRTEAESRVEMNLNAMEPSLVLMRRDGTLISKETLGQQMNSVRHMGIANDGTILTGQQFMGPSQERSELLAIKRPGQPFAAFPVADEQLQAMGHYTASVAVHSELRLVALTAPRGNRFFIWDMDSAELRLDGPLPDCAGVGAVADGFVVTSGQGRCRFYDCRQTTLMAKPLELPAGFWDNHLHLI
>CP027758.1|AZE80348.1|5057239_5058304_+|Iron-regulated-protein-A-precursor
MFRPKLLFTSLAALALGACSPQDPQAVTSAAIAKQVILPTYSRWVEADRQLAVSALAYCQGKESLDTARADFLHAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKNLVGRQVEQLVSAQPQIDAAALAKSSVVVQGLSAYEYILYDAKPDVADQAQKARYCPLLMAIGERQKVLAEEILASWNSTDGMLAQMTKFPNQRYADSHEAIADLLRVQVTALDTLKKKLGTPMGRQTKGIPQPFQADAWRSQSSLQSLEASLAAAQTVWVGVDNKGLRGLLPADQKPLAEKIDAAYAASLKLFASNQRSLNELLNDDAGRQQLNDIYDSLNVVHRLHEGELAKALGIQLGFNANDGD
>CP027758.1|AZE80347.1|5055768_5057208_+|putative-thiol-oxidoreductase
MFRALFCLSAALMALSLTACDNAPRFTKAEPGESRSGGATTVNKRDQNAFSLPSANLAPTRRLDFSVGNSFFRSPWVIAPSTTTARDGLGPLFNTNACQNCHIKDGRGHPPLPDAPNAVSMLVRLSIPLSITEQPPYAKLIEQLGVVPEPVYGGQLQDMSVPGVVPEGKVRVDYSPVQVSFKDGTVVELRKPDLQITQLGYGPMHPDTRFSARVAPPMIGLGLLEAISDADILRNTDPKTADKDAIVGHANWVWDDAQHKTVLGRFGWKAGQPNLNQQNVHAFSGDMGLTTSLRPFDDCTDAQVACKQAPNGNGPDGEPEVSDNILRLVLFYTRNLAVPARRDVNTPQVLAGKNLFYQAGCQGCHKPTFTTAANAAEPELANQVIRPYSDLLLHDMGEGLADNRTEFKASGRDWRTPPLWGIGLTQAVSGHTQFLHDGRARNLLEAVLWHGGEAQAAQQHVLSFNAEQRAALLAFLNSL
>CP027758.1|AZE80357.1|5066820_5068467_-|Heat-shock-protein-60-family-chaperone-GroEL
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEIELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGYKAVAAGMNPMDLKRGIDKATIAVVAELKNLSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELDNPLILLVDKKISNIREMLPVLEAVAKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVEGDIESRIAQIRAQVAETSSDYDREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRALEALTNLTGDNADQNVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGKGNYGYNAATGIYGDMIEMGILDPTKVTRSALQAAASIGGLILTTEAAIADKPKAEGAAGGGMPDMGGMGGMGGMM
>CP027758.1|AZE80358.1|5068516_5068810_-|Heat-shock-protein-60-family-co-chaperone-GroES
MKLRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGVILAAGPGKALENGEVRALAVKVGDKVVFGPYSGSNTVKIDGEDLLVMSESEILAVLED
>CP027758.1|AZE80359.1|5069057_5069534_-|protein-FxsA
MRPFLLLFLLFPVLELFVFVQVSGAIGFFPALLLIIAGSMLGVLVLRVAGLATALRARESLNRGELPAQTMLEGLMMALAGGLLILPGFVSDVLGLVLLLPFTRKLLAGKMRQRAEEAAIRQRAFADDLQPRGGPAPRQPLGREGDVIEGEFEHRDSK
>CP027758.1|AZE80360.1|5069600_5070332_-|Putative-heme-iron-utilization-protein
MSAHVAKNARELLLKEYRGALSTLSKAMPGFPFGSVVPYCLDEQGRPLILISRIAQHTHNLQKDPKCSLLVGERGADDVQAVGRLTYLAEAEKLEDEAAIEAAAERYYRYFPDSANYHKAHDFDFWVLKPVRHRYIGGFGAIHWVDQLTLANPFAGKAERSMIEHMNSDHTKAIAHYVELSGLPTSEPAQLAGIDSEGMHLRIGQSLHWLPFATPCNTPTQVREALVSLAHAEAWPKITAVNA
>CP027758.1|AZE80361.1|5070435_5071443_-|Peptide-chain-release-factor-RF-3
MLSRTLLCLAVFSASTPLLADTVWLKNGDRLTGKIKVFDGGKLLIQTTYAGSIPVDWKQVKTLESDQELLVKQDAYSGEKAKSLHASDDGKVVLANGEAPKTVELASIQQIMKPKPVIEDLVWKGNVDLALDYKRADKDTNDYDVDFKTSARHGQWRHTGKGEYNREFQDDVTTTDNWALEYSLDRFITEHWFWQGRLTYKRDKVEDLARQRVVGTGPGYQFWDDELGAFSLGSLVNRTDYEYADGGKDNFYSLAMKWNYNRYLVGKTVEFFTNGELGKPLAGPAEYSLDAEMGLRYKVTEWASLNLKAERNEVSGNSDSSLSKTRYTAGFGVAW
>CP027758.1|AZE80362.1|5071600_5071954_+|DNA-base-flipping-protein
MNLPADTPQNPADMRRTALYLTLAQVPEGCVVSYGELAQLAGLGRAARWVGRTLSQLPEDTRLPWHRVLGAGGRISLPVGSASGDEQRARLRSEGITILNNRVDIQRHGWRPVEHSG
>CP027758.1|AZE80363.1|5071997_5073530_+|AmpG-permease
MPRKTWRAALAAYASPSTLVLLLLGFAAGMPYMLVFSTLSVWLREAGVARETIGYASLIGLAYAFKWVWSPLLDQWRLPLLGKLGRRRSWLVLAQSLVILGLIGMGFCDPQKHLSWLIAIAVVVAFASATQDIAVDAYRLEIADDSRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGFNYKHSAWTGTYVLFGVLMVPALLTTLLMREPDVPLRTQLQAGRYSFVHQLVSVFVLIVLLVSVPAMFTQLYNTDFASVLLQGVSLWELLMEDRAFLRAILYITLTSLCLSAMGRRGLAPVLTPVNDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIAGVSKIFGLIMTLVGAGMGGLLIVRFGILPILFIGGVASAGTNLLFVMLADMGPDLQMLIVTISLDNFSSGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFGYHNFFMITCLLGLPTLFLIALHWFQENRRIRLNPPTED
>CP027758.1|AZE80364.1|5073730_5075446_+|Prolyl-tRNA-synthetase,-bacterial-type
MRTSQYLLATQKETPSDAVVISHQLMLRAGMIRKLASGLYTWLPMGLKVMRKVEAIVREEMNAAGSLEVLMPSTQPAELWQESGRWEEYGPELLRFKDRHGRDFCAGPTHEEVITDLMRNELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADLASLQVTYDRMHQAYCNVFTRLGLKFRPVEADNGSIGGAGSHEFHVLAESGEDDIVFSNGSDYAANIEKAEAVPRETSRPAPAEELRLVDTPDTKTIAALVEKFNLPIEKTIKTLIVHAEEEGKLIALVIRGDHELNEIKAANQPGVASPLVMASDAELRDAIGAGAGSLGPLNLPLPIIIDRSVELMSDFGIGANIDDKHYFGVNWERDLPVPTVADLRNVVAGDPSPDGKGTLEIKRGIEVGHIFQLGNKYSKAMKCEVLGENGKPITLEMGCYGIGVSRVVAAAIEQNNDEKGIIWSDALAPFQVALVPLRYETEQVREATDKLYAELTAAGFEVLLDDRDKKTSPGIKFADMELIGIPHRIVVSDRGLADGNLEYKSRTEAEAQPLPVADVLSFLQARIRR
>CP027758.1|AZE80365.1|5075466_5076420_+|putative-lipoprotein
MFKPHTRALGGAALCGALLVSGCANQMSQRSEHEERIERKLLDHSLQIDVGEPKVLELPQRRVRIHEQKTFEVTEFEVTRRYDRYTPYQPWRKLYEMPLGAVALVAGVGANVANIFALGNLPTSVTRDWLSYGVDGINPFMNVQSHGRAQQNLAAIDEVQRDKRLEYSSLPWSERPVQVTAGKQTHELTTDRNGILRLNLLDSPFAEQDLNRVTTLKISVEDGQDDVHTDSTLAVSNSLRGKLLEAHGLIYDDLEDDEVNQWVHRVKRLSELGLEEEASELEQSLIELTRNDPELQQEFLQALTKDAGRLVADPGAR
>CP027758.1|AZE80366.1|5076549_5077647_-|DNA-polymerase-IV
MRYCPPVGSHPVYMTQRKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMDAYKEASKEIQTIFRDYTDLIEPLSLDEAYLDVSDSPHFGGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQIEDFVSQLRVSKLHGVGKVTADKLARLGIEDCLQLREWNKLALVREFGSFGERLWSLARGIDDRVVQNDSRRQSISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQTTLEQAGAGRDLESYQQLLTQAFNRGGKPVRLLGIGVRLLDLSGGNEQLEFSW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1349947 : 1391397

uncultured_Caudovirales_phage(27.27%)

tail,tRNA,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE76985.1\|1349947_1350418_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
AZE76986.1\|1350498_1351542_-	Ferric iron ABC transporter, ATP-binding protein	Q6GZ03	Mycoplasma_phage	8.6e-21	36.3
AZE76987.1\|1351538_1352462_-	Ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	3.2e-19	27.7
AZE76988.1\|1352894_1355003_+	Formate dehydrogenase-O, major subunit	NA	NA	NA	NA
AZE76989.1\|1355089_1355428_+	Glutaredoxin-related protein	NA	NA	NA	NA
AZE76990.1\|1355490_1355961_-	Bacterioferritin	NA	NA	NA	NA
AZE76991.1\|1356161_1356380_-	Bacterioferritin-associated ferredoxin	NA	NA	NA	NA
AZE76992.1\|1356623_1357226_+	Alkyl hydroperoxide reductase subunit C-like protein	NA	NA	NA	NA
AZE76993.1\|1357293_1357965_-	Ribonuclease T	NA	NA	NA	NA
AZE76994.1\|1357961_1359008_-	Dihydroorotase	NA	NA	NA	NA
AZE76995.1\|1359164_1360073_+	outer membrane protein, OmpA family	NA	NA	NA	NA
AZE76996.1\|1360202_1361420_+	Argininosuccinate synthase	NA	NA	NA	NA
AZE76997.1\|1362047_1362680_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA
AZE76998.1\|1362763_1362946_-	hypothetical protein	NA	NA	NA	NA
AZE76999.1\|1363053_1363692_-	Endonuclease III	NA	NA	NA	NA
AZE77000.1\|1363800_1364970_-	Electron transport complex protein RnfB	NA	NA	NA	NA
AZE77001.1\|1365057_1367109_-\|tRNA	Methionyl-tRNA synthetase	NA	NA	NA	NA
AZE77002.1\|1367281_1368376_+	[4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)	NA	NA	NA	NA
AZE77003.1\|1368870_1369194_-	4Fe-4S dicluster domain	NA	NA	NA	NA
AZE77004.1\|1369336_1371985_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	8.9e-30	21.9
AZE77005.1\|1372141_1372417_-	hypothetical protein	NA	NA	NA	NA
AZE77006.1\|1373092_1373770_-	hypothetical protein	NA	NA	NA	NA
AZE77007.1\|1373854_1374226_-	hypothetical protein	NA	NA	NA	NA
AZE77008.1\|1374218_1374707_-	GepA protein	D0UIM3	Aggregatibacter_phage	2.2e-27	44.5
AZE77009.1\|1374950_1375685_+	Transcriptional regulator	B5TK58	Pseudomonas_phage	4.8e-119	87.7
AZE77010.1\|1375871_1375991_+	hypothetical protein	NA	NA	NA	NA
AZE77011.1\|1376274_1376619_+	Holin	B5TK61	Pseudomonas_phage	1.7e-45	80.2
AZE77012.1\|1376897_1377413_+	Putidacin L1	NA	NA	NA	NA
AZE77013.1\|1377565_1378078_+	hypothetical protein	NA	NA	NA	NA
AZE77014.1\|1378081_1378693_+\|plate	Baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	3.8e-45	53.3
AZE77015.1\|1378702_1379035_+\|plate	Baseplate assembly protein W	A0A2H4JI46	uncultured_Caudovirales_phage	9.7e-35	65.5
AZE77016.1\|1379031_1380027_+\|plate	Phage-related baseplate assembly protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.2e-112	64.4
AZE77017.1\|1380023_1380662_+	Tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	4.8e-38	51.9
AZE77018.1\|1380658_1381189_+\|tail	Phage tail fiber protein	B0ZSG1	Halomonas_phage	8.5e-49	57.5
AZE77019.1\|1381236_1382019_+	hypothetical protein	NA	NA	NA	NA
AZE77020.1\|1382030_1382333_+	hypothetical protein	Q8H9M8	Vibrio_phage	4.9e-09	54.0
AZE77021.1\|1382420_1382594_+	hypothetical protein	NA	NA	NA	NA
AZE77022.1\|1382596_1382686_+\|tail	Major tail sheath protein	NA	NA	NA	NA
AZE77023.1\|1382661_1383762_+\|tail	Major tail sheath protein	B0ZSG8	Halomonas_phage	4.3e-119	58.7
AZE77024.1\|1383761_1384268_+	hypothetical protein	Q6R4W3	Vibrio_virus	3.8e-22	34.5
AZE77025.1\|1384451_1385024_+	hypothetical protein	B0ZSH0	Halomonas_phage	1.6e-29	40.1
AZE77026.1\|1385032_1385146_+	hypothetical protein	NA	NA	NA	NA
AZE77027.1\|1385151_1386972_+\|tail	Phage tail length tape-measure protein	NA	NA	NA	NA
AZE77028.1\|1386971_1387355_+	Phage protein	B0ZSH2	Halomonas_phage	3.5e-36	59.8
AZE77029.1\|1387347_1387560_+\|tail	P2-like prophage tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	2.4e-18	62.9
AZE77030.1\|1387569_1388580_+\|tail	Phage tail protein D	A0A2H4JH05	uncultured_Caudovirales_phage	2.4e-100	55.4
AZE77031.1\|1388647_1389205_+	Lytic enzyme	B5TK83	Pseudomonas_phage	7.5e-80	78.1
AZE77032.1\|1389192_1389672_+	hypothetical protein	B5TK84	Pseudomonas_phage	1.4e-37	56.9
AZE77033.1\|1389754_1390255_+	Nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	4.5e-68	79.5
AZE77034.1\|1390338_1391397_+	RecA protein	A0A0S2MVG1	Bacillus_phage	2.4e-111	62.4

DBSCAN-SWA_2

1497030 : 1501992

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE77136.1\|1497030_1497780_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.6e-63	49.8
AZE77137.1\|1497779_1498457_+	Protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.1e-43	53.1
AZE77138.1\|1498666_1499503_+	Murein hydrolase activator NlpD	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
AZE77139.1\|1499608_1500616_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
AZE77140.1\|1500828_1501038_-	Cold shock protein of CSP family	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
AZE77141.1\|1501425_1501992_+	Deoxycytidine triphosphate deaminase	S5VM63	Pseudomonas_phage	3.7e-74	73.3

DBSCAN-SWA_3

3129837 : 3179503

Streptomyces_phage(16.67%)

integrase,protease

attL 3178431:3178454|attR 3179528:3179551

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE78575.1\|3129837_3131151_+\|protease	ABC-type protease exporter, membrane fusion protein family component PrtE/AprE	NA	NA	NA	NA
AZE78576.1\|3131153_3132488_+\|protease	ABC-type protease exporter, outer membrane component PrtF/AprF	NA	NA	NA	NA
AZE78577.1\|3132519_3135477_+\|protease	Serine protease	NA	NA	NA	NA
AZE78578.1\|3135652_3138760_+\|protease	Extracellular serine protease precursor	NA	NA	NA	NA
AZE78579.1\|3138854_3140279_+	Lipase	NA	NA	NA	NA
AZE78580.1\|3140412_3140637_-	hypothetical protein	NA	NA	NA	NA
AZE78581.1\|3140824_3142471_+	hypothetical protein	NA	NA	NA	NA
AZE78582.1\|3142467_3144726_+	DinG family ATP-dependent helicase	NA	NA	NA	NA
AZE78583.1\|3145451_3145997_+	hypothetical protein	NA	NA	NA	NA
AZE78584.1\|3146081_3146294_+	hypothetical protein	NA	NA	NA	NA
AZE78585.1\|3146305_3146440_+	hypothetical protein	NA	NA	NA	NA
AZE78586.1\|3146430_3147783_-	sodium/hydrogen exchanger family protein	NA	NA	NA	NA
AZE78587.1\|3147965_3149180_+	Aspartate aminotransferase	NA	NA	NA	NA
AZE78588.1\|3149205_3149529_-	Thioredoxin	A0A1J0GW78	Streptomyces_phage	8.0e-18	41.9
AZE78589.1\|3149525_3149786_-	Thioredoxin	NA	NA	NA	NA
AZE78590.1\|3149927_3150368_-	Transcriptional regulator, AsnC family	NA	NA	NA	NA
AZE78591.1\|3150476_3151379_+	Permease of the drug/metabolite transporter (DMT) superfamily	NA	NA	NA	NA
AZE78592.1\|3151356_3153375_-\|protease	putative protease YdcP	Q6DW11	Phage_TP	8.0e-23	29.2
AZE78593.1\|3153446_3153563_+	hypothetical protein	NA	NA	NA	NA
AZE78594.1\|3153591_3155241_+	Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase	A0A2H4PQU7	Staphylococcus_phage	2.1e-74	37.2
AZE78595.1\|3155262_3156030_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZE78596.1\|3156042_3157227_+	3-ketoacyl-CoA thiolase	NA	NA	NA	NA
AZE78597.1\|3157236_3158364_+	Acyl-CoA dehydrogenase, short-chain specific	NA	NA	NA	NA
AZE78598.1\|3158375_3159149_+	Enoyl-CoA hydratase	NA	NA	NA	NA
AZE78599.1\|3159641_3160793_-	Acyl-CoA dehydrogenase	NA	NA	NA	NA
AZE78600.1\|3160796_3161900_-	3-hydroxyisobutyryl-CoA hydrolase	NA	NA	NA	NA
AZE78601.1\|3162017_3162881_-	Esterase/lipase	NA	NA	NA	NA
AZE78602.1\|3162880_3164494_-	putative cytochrome P450 hydroxylase	NA	NA	NA	NA
AZE78603.1\|3164495_3166115_-	Putative cytochrome P450 hydroxylase	NA	NA	NA	NA
AZE78604.1\|3166388_3167096_-	Putative transmembrane protein	NA	NA	NA	NA
AZE78605.1\|3167262_3167487_-	hypothetical protein	NA	NA	NA	NA
AZE78606.1\|3167772_3169395_-	4-amino-4-deoxy-L-arabinose transferase	NA	NA	NA	NA
AZE78607.1\|3169395_3170778_-	UDP-glucose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	1.3e-80	38.2
AZE78608.1\|3170774_3171188_-	Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF	NA	NA	NA	NA
AZE78609.1\|3171184_3171532_-	Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE	NA	NA	NA	NA
AZE78610.1\|3171528_3173184_-	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	NA	NA	NA	NA
AZE78611.1\|3173180_3174065_-	4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD	NA	NA	NA	NA
AZE78612.1\|3174064_3176068_-	UDP-4-amino-4-deoxy-L-arabinose formyltransferase	A0A2K9KZK0	Tupanvirus	2.4e-19	26.0
AZE78613.1\|3176064_3177099_-	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	S5FKN0	Shigella_phage	2.1e-35	32.4
AZE78614.1\|3177510_3178323_+	hypothetical protein	NA	NA	NA	NA
3178431:3178454	attL	NA	NA	NA	NA
AZE78615.1\|3178588_3179503_+\|integrase	Phage integrase family protein	NA	NA	NA	NA
AZE78615.1\|3178588_3179503_+\|integrase	Phage integrase family protein	NA	NA	NA	NA
3179528:3179551	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3803729 : 3813719

uncultured_Caudovirales_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZE79176.1\|3803729_3804554_-\|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	A0A0U2S5Z2	Escherichia_phage	6.9e-106	72.0
AZE79177.1\|3804837_3805440_+	Inner membrane protein YohC	NA	NA	NA	NA
AZE79178.1\|3805569_3806064_+	Protein SprT	NA	NA	NA	NA
AZE79179.1\|3806158_3807334_-	Alpha-methylacyl-CoA racemase	NA	NA	NA	NA
AZE79180.1\|3807491_3807884_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	9.6e-58	84.6
AZE79181.1\|3807885_3808236_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.6e-40	69.2
AZE79182.1\|3808235_3808514_+\|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	6.9e-26	60.6
AZE79183.1\|3808510_3808846_+\|tRNA	tRNA 2-thiouridine synthesis protein TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	4.7e-45	77.5
AZE79184.1\|3808842_3809844_+	Anthranilate phosphoribosyltransferase like	A0A2H4JBY5	uncultured_Caudovirales_phage	9.1e-169	86.3
AZE79185.1\|3809932_3810928_+	Glutathione S-transferase, omega	NA	NA	NA	NA
AZE79186.1\|3811043_3812438_-	Precorrin-2 oxidase	NA	NA	NA	NA
AZE79187.1\|3812438_3813719_-\|tRNA	Seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.3e-98	53.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027758

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection