CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP033968	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence	0 crisprs	NA	23
CP033969	Cupriavidus pauculus strain FDAARGOS_614 chromosome 1, complete sequence	0 crisprs	RT,cas3,WYL,DEDDh,DinG,PD-DExK	6
CP033971	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed2, complete sequence	0 crisprs	csa3	0
CP033970	Cupriavidus pauculus strain FDAARGOS_614 chromosome 2, complete sequence	0 crisprs	DEDDh,csa3,DinG	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1453

Bacillus_virus(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11917.1\|736_1453_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	1.0e-12	41.7

DBSCAN-SWA_2

4796 : 69914

Leptospira_phage(16.67%)

transposase,tRNA,integrase

attL 34200:34215|attR 64679:64694

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11919.1\|4796_5342_+\|transposase	transposase	NA	NA	NA	NA
AZG11920.1\|5453_6893_+\|transposase	IS481 family transposase	O12274	Simian_T-lymphotropic_virus	4.1e-05	37.8
AZG11921.1\|6889_7723_+	general secretion pathway protein GspA	NA	NA	NA	NA
AZG11922.1\|7719_7992_+	hypothetical protein	NA	NA	NA	NA
AZG11923.1\|8694_9117_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AZG11924.1\|9604_12097_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.8e-118	40.8
AZG11925.1\|12153_12462_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
AZG11926.1\|12703_13828_-	glycosyltransferase	U5P087	Shigella_phage	2.1e-73	47.3
AZG11927.1\|13824_14208_-	GtrA family protein	NA	NA	NA	NA
AZG12205.1\|14204_15812_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
AZG11928.1\|16334_16868_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZG11929.1\|17032_17596_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
AZG11930.1\|17811_18867_+	DMT family transporter	NA	NA	NA	NA
AZG11931.1\|18964_19489_-\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AZG11932.1\|19532_20945_-	aspartate ammonia-lyase	NA	NA	NA	NA
AZG11933.1\|20937_21921_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZG12206.1\|21950_23327_-	MFS transporter	NA	NA	NA	NA
AZG11934.1\|24051_24960_-	EAL domain-containing protein	NA	NA	NA	NA
AZG11935.1\|25779_26205_-	response regulator	NA	NA	NA	NA
AZG11936.1\|26201_29327_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	1.1e-47	33.4
AZG11937.1\|29391_30578_-\|transposase	IS3-like element ISRme13 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-56	39.7
AZG11938.1\|30636_31797_-	hypothetical protein	NA	NA	NA	NA
AZG11939.1\|32219_32798_-	hypothetical protein	NA	NA	NA	NA
AZG11940.1\|33352_34525_-\|integrase	site-specific integrase	A0A0K0MWE8	Gordonia_phage	9.8e-05	35.1
34200:34215	attL	NA	NA	NA	NA
AZG11941.1\|34670_35618_+	DNA-binding protein	NA	NA	NA	NA
AZG11942.1\|35755_36190_+	hypothetical protein	NA	NA	NA	NA
AZG11943.1\|36241_39223_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.8e-79	26.3
AZG11944.1\|39372_40446_-	type II asparaginase	NA	NA	NA	NA
AZG11945.1\|40469_41237_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-25	35.2
AZG11946.1\|41246_42014_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZG11947.1\|42010_42748_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZG11948.1\|42756_44133_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZG11949.1\|44135_44960_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZG11950.1\|46008_47028_-	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AZG11951.1\|47861_49136_+	HNH endonuclease	NA	NA	NA	NA
AZG11952.1\|49132_51277_+\|integrase	integrase	NA	NA	NA	NA
AZG11953.1\|51302_51632_+	hypothetical protein	NA	NA	NA	NA
AZG11954.1\|51704_52325_+	hypothetical protein	NA	NA	NA	NA
AZG12207.1\|52526_53249_+	hypothetical protein	NA	NA	NA	NA
AZG11955.1\|53306_54497_+	hypothetical protein	NA	NA	NA	NA
AZG11956.1\|54604_55297_+	hypothetical protein	NA	NA	NA	NA
AZG11957.1\|55622_57098_+	hypothetical protein	NA	NA	NA	NA
AZG11958.1\|57210_57543_+	hypothetical protein	NA	NA	NA	NA
AZG11959.1\|57605_57974_-	hypothetical protein	NA	NA	NA	NA
AZG11960.1\|58192_58372_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AZG11961.1\|58623_59238_+	hypothetical protein	NA	NA	NA	NA
AZG11962.1\|59248_59482_+	hypothetical protein	NA	NA	NA	NA
AZG11963.1\|59703_60102_+	hypothetical protein	NA	NA	NA	NA
AZG11964.1\|60483_61455_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZG11965.1\|61507_62056_+	hypothetical protein	NA	NA	NA	NA
AZG11966.1\|63077_63374_+	hypothetical protein	NA	NA	NA	NA
AZG11967.1\|63495_63960_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AZG11968.1\|63959_64310_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AZG11969.1\|64341_65931_+\|transposase	IS66 family transposase	S5VLC8	Leptospira_phage	1.7e-39	33.1
64679:64694	attR	NA	NA	NA	NA
AZG11970.1\|65934_66624_+	hypothetical protein	Q8W6R8	Burkholderia_virus	2.6e-37	45.7
AZG11971.1\|66620_67082_-	hypothetical protein	NA	NA	NA	NA
AZG12208.1\|67078_67342_-	hypothetical protein	NA	NA	NA	NA
AZG11972.1\|67683_68808_+	ParA family protein	Q7Y3Y6	Yersinia_phage	1.5e-07	27.1
AZG11973.1\|68804_69914_+	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	3.9e-11	27.4

DBSCAN-SWA_3

77716 : 80368

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11978.1\|77716_80368_+	EAL domain-containing protein	G3MA91	Bacillus_virus	3.5e-18	30.7

DBSCAN-SWA_4

83500 : 84460

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11982.1\|83500_84460_-	5'-3' exonuclease	A0A2H4P757	Pseudomonas_phage	9.1e-25	26.5

DBSCAN-SWA_5

89873 : 90926

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11989.1\|89873_90926_+	SAM-dependent methyltransferase	A0A2I7RHK4	Vibrio_phage	5.5e-23	39.5

DBSCAN-SWA_6

97269 : 98265

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG11998.1\|97269_98265_-	endonuclease	U6C712	Ralstonia_phage	6.1e-08	32.2

DBSCAN-SWA_7

108217 : 109075

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12013.1\|108217_109075_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	1.4e-24	34.0

DBSCAN-SWA_8

113893 : 115687

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12019.1\|113893_115687_+	ATP-dependent helicase	A0A2I7RIK5	Vibrio_phage	7.3e-44	31.8

DBSCAN-SWA_9

122492 : 123694

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12213.1\|122492_123020_+	DUF3850 domain-containing protein	I6NVL3	Burkholderia_virus	5.2e-06	54.0
AZG12032.1\|123022_123694_+	hypothetical protein	A0A2R3UAL4	Myoviridae_environmental_samples	1.2e-12	40.7

DBSCAN-SWA_10

128578 : 129760

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12034.1\|128578_129760_+	phage Gp37/Gp68 family protein	Q8W6R4	Burkholderia_virus	4.9e-81	49.3

DBSCAN-SWA_11

162384 : 164888

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12080.1\|162384_163356_+	hypothetical protein	A0A1D8EVK5	Mycobacterium_phage	4.0e-12	28.9
AZG12081.1\|163508_163790_+	hypothetical protein	NA	NA	NA	NA
AZG12082.1\|164168_164888_+	DUF2591 domain-containing protein	F8TVJ2	EBPR_siphovirus	2.3e-09	35.5

DBSCAN-SWA_12

174933 : 178492

Virus_Rctr197k(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12094.1\|174933_175455_+	hypothetical protein	A0A1P8DIR2	Virus_Rctr197k	3.8e-09	38.9
AZG12095.1\|175508_176135_+	hypothetical protein	NA	NA	NA	NA
AZG12096.1\|176237_176498_+	hypothetical protein	NA	NA	NA	NA
AZG12097.1\|176614_177445_+	hypothetical protein	NA	NA	NA	NA
AZG12098.1\|177579_177855_-	hypothetical protein	NA	NA	NA	NA
AZG12099.1\|178204_178492_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	7.1e-10	39.3

DBSCAN-SWA_13

181531 : 183521

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12218.1\|181531_182365_+	class I SAM-dependent methyltransferase	A0A2K8I312	Pseudomonas_phage	7.0e-66	52.7
AZG12105.1\|182685_183111_+	hypothetical protein	NA	NA	NA	NA
AZG12106.1\|183131_183521_+	chemotaxis protein CheY	W8CYM9	Bacillus_phage	6.1e-12	38.3

DBSCAN-SWA_14

194032 : 194692

Faecalibacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12220.1\|194032_194692_+	hypothetical protein	A0A2K9V411	Faecalibacterium_phage	3.8e-06	31.7

DBSCAN-SWA_15

197700 : 198354

Burkholderia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12117.1\|197700_198354_+	hypothetical protein	I6NP76	Burkholderia_phage	2.9e-06	36.8

DBSCAN-SWA_16

201689 : 204006

Acidithiobacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12121.1\|201689_203243_+\|transposase	IS21-like element ISRme9 family transposase	K4I413	Acidithiobacillus_phage	8.3e-161	54.6
AZG12122.1\|203250_204006_+	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	4.0e-84	62.7

DBSCAN-SWA_17

208243 : 209430

Acinetobacter_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12128.1\|208243_209430_-\|transposase	IS3-like element ISRme13 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-56	39.7

DBSCAN-SWA_18

214118 : 217232

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12133.1\|214118_217232_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.8e-61	22.5

DBSCAN-SWA_19

220813 : 223729

Salmonella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12136.1\|220813_223729_-\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-52	24.0

DBSCAN-SWA_20

230143 : 236860

uncultured_Caudovirales_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12144.1\|230143_233020_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.7e-37	24.4
AZG12227.1\|233035_233383_-	hypothetical protein	NA	NA	NA	NA
AZG12228.1\|233875_236860_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	4.3e-81	26.8

DBSCAN-SWA_21

246800 : 250573

Acidovorax_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12156.1\|246800_247706_-	recombination-associated protein RdgC	A0A218M310	Acidovorax_phage	2.9e-65	44.1
AZG12157.1\|248414_248636_-	hypothetical protein	NA	NA	NA	NA
AZG12229.1\|248916_249858_+	DNA primase	NA	NA	NA	NA
AZG12158.1\|250024_250573_+	DUF882 domain-containing protein	A0A2I7R851	Vibrio_phage	4.1e-06	42.6

DBSCAN-SWA_22

253708 : 254584

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12161.1\|253708_254584_-	hypothetical protein	I3PUZ3	Vibrio_phage	2.5e-29	42.1

DBSCAN-SWA_23

272226 : 276257

Ralstonia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12177.1\|272226_272661_-	lytic transglycosylase	A0A0A8J856	Ralstonia_phage	6.6e-07	34.0
AZG12232.1\|272707_273679_+	sel1 repeat family protein	NA	NA	NA	NA
AZG12178.1\|273764_276257_-	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	M4QT32	Loktanella_phage	1.4e-146	39.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033969

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

50426 : 59296

Tupanvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG12282.1\|50426_51350_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	6.7e-41	34.2
AZG12283.1\|51499_52606_+	lytic murein transglycosylase B	NA	NA	NA	NA
AZG12284.1\|52706_53609_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	2.2e-52	40.1
AZG12285.1\|53722_55048_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	8.4e-146	65.2
AZG15225.1\|55250_55562_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
AZG12286.1\|55878_56877_-	ADP-glyceromanno-heptose 6-epimerase	M4PRR6	Cyanophage	1.2e-27	33.6
AZG12287.1\|56903_57848_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.1e-14	28.2
AZG12288.1\|57922_59296_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	3.4e-73	36.6

DBSCAN-SWA_2

1001313 : 1007437

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG13075.1\|1001313_1001886_-	N-acetyltransferase family protein	A0A2H4J136	uncultured_Caudovirales_phage	2.0e-19	38.9
AZG13076.1\|1002091_1002451_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	6.8e-18	45.3
AZG13077.1\|1002550_1002781_-	hypothetical protein	NA	NA	NA	NA
AZG13078.1\|1002950_1003595_-	exonuclease	A0A2L0UZL4	Agrobacterium_phage	1.2e-33	38.4
AZG13079.1\|1003606_1004257_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZG15273.1\|1004657_1005320_+	septal ring lytic transglycosylase RlpA family protein	H2BCY4	Synechococcus_phage	1.5e-18	53.2
AZG13080.1\|1005450_1006380_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.0e-33	40.9
AZG13081.1\|1006395_1006818_+	YraN family protein	NA	NA	NA	NA
AZG13082.1\|1006849_1007437_+	phosphoheptose isomerase	A0A067XQR2	Caulobacter_phage	1.3e-13	31.4

DBSCAN-SWA_3

1895955 : 1930530

Burkholderia_phage(40.0%)

head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG13826.1\|1895955_1897167_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	2.4e-83	41.1
AZG13827.1\|1897184_1898222_+	hypothetical protein	NA	NA	NA	NA
AZG13828.1\|1898259_1898691_-	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	1.2e-24	43.8
AZG13829.1\|1898735_1898990_+	hypothetical protein	NA	NA	NA	NA
AZG13830.1\|1898995_1899856_-	DNA adenine methylase	Q5QF26	Pseudomonas_virus	1.0e-72	51.3
AZG13831.1\|1900327_1901407_-	hypothetical protein	H2BD46	Pseudomonas_phage	5.6e-39	45.7
AZG13832.1\|1901403_1902120_-	hypothetical protein	J7I0T4	Pseudomonas_phage	2.1e-10	42.4
AZG13833.1\|1902191_1903364_-	hypothetical protein	J7HXB6	Pseudomonas_phage	9.9e-66	52.4
AZG13834.1\|1903394_1904189_-	PD-(D/E)XK nuclease family protein	J7HXJ4	Pseudomonas_phage	3.9e-58	50.0
AZG13835.1\|1904745_1905093_+	hypothetical protein	NA	NA	NA	NA
AZG13836.1\|1905089_1905560_+	RusA family crossover junction endodeoxyribonuclease	A9YWY9	Burkholderia_phage	1.2e-43	57.1
AZG15329.1\|1905585_1906194_+	DNA-binding protein	Q3HR05	Burkholderia_phage	5.2e-50	54.6
AZG13837.1\|1906310_1906727_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PH90	Moraxella_phage	1.0e-36	62.0
AZG13838.1\|1906788_1906959_-	type II toxin-antitoxin system HicA family toxin	A0A0R6PGU2	Moraxella_phage	1.5e-12	67.9
AZG13839.1\|1907157_1908540_+	chromosome partitioning protein ParB	A0A1P8VV91	Erythrobacter_phage	9.5e-84	31.6
AZG13840.1\|1908545_1908956_+	hypothetical protein	NA	NA	NA	NA
AZG13841.1\|1908906_1910457_+	hypothetical protein	W8VT11	Pseudomonas_phage	7.1e-112	45.7
AZG13842.1\|1910453_1912022_+	DUF1073 domain-containing protein	A0A0P0I486	Acinetobacter_phage	1.1e-157	63.1
AZG13843.1\|1911963_1912605_+\|head	phage head morphogenesis protein	A9YWZ8	Burkholderia_phage	2.6e-76	67.4
AZG13844.1\|1912715_1914029_+	DUF2213 domain-containing protein	A0A0P0IRE1	Acinetobacter_phage	3.2e-57	46.4
AZG13845.1\|1914042_1914537_+	hypothetical protein	A0A0P0I8F3	Acinetobacter_phage	1.7e-35	54.3
AZG15330.1\|1914574_1915588_+	DUF2184 domain-containing protein	A0A0N7IRF2	Acinetobacter_phage	6.0e-128	70.6
AZG13846.1\|1915600_1916029_+	hypothetical protein	NA	NA	NA	NA
AZG13847.1\|1916069_1916453_+	DUF4054 domain-containing protein	A9YX25	Burkholderia_phage	4.4e-39	65.0
AZG13848.1\|1916481_1917018_+	hypothetical protein	A9YX26	Burkholderia_phage	1.9e-48	62.1
AZG13849.1\|1917021_1917393_+	hypothetical protein	A9YX28	Burkholderia_phage	2.4e-50	77.2
AZG13850.1\|1917396_1917987_+	hypothetical protein	A9YX29	Burkholderia_phage	3.7e-69	66.0
AZG13851.1\|1917997_1919473_+	DUF3383 domain-containing protein	A0A0P0I492	Acinetobacter_phage	6.1e-105	45.1
AZG13852.1\|1919488_1919935_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	1.2e-32	49.3
AZG13853.1\|1919937_1920411_+	hypothetical protein	A0A0N7IRF3	Acinetobacter_phage	5.1e-21	43.0
AZG13854.1\|1922294_1922873_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	6.3e-21	38.1
AZG13855.1\|1922872_1923187_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.2e-15	41.2
AZG13856.1\|1923186_1924155_+	hypothetical protein	A9YX04	Burkholderia_phage	4.4e-136	82.1
AZG13857.1\|1924151_1924517_-	hypothetical protein	A9YX05	Burkholderia_phage	7.1e-39	64.2
AZG13858.1\|1924527_1925283_+	hypothetical protein	A9YX06	Burkholderia_phage	2.4e-105	78.5
AZG13859.1\|1925291_1925645_+	hypothetical protein	A9YX11	Burkholderia_phage	2.3e-42	74.4
AZG13860.1\|1925644_1926826_+	hypothetical protein	A9YX12	Burkholderia_phage	3.7e-153	74.0
AZG13861.1\|1926827_1927490_+	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	1.7e-91	73.6
AZG13862.1\|1927498_1928491_+	hypothetical protein	A9YX14	Burkholderia_phage	5.8e-59	37.3
AZG13863.1\|1928551_1929934_+	acyltransferase	NA	NA	NA	NA
AZG13864.1\|1929996_1930530_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	1.6e-42	57.6

DBSCAN-SWA_4

2716174 : 2750378

Acidithiobacillus_phage(33.33%)

transposase,integrase,holin

attL 2734760:2734774|attR 2750070:2750084

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG15373.1\|2716174_2717782_+\|holin	glucose-methanol-choline oxidoreductase	A0A1V0SI18	Klosneuvirus	3.5e-61	32.9
AZG14459.1\|2718109_2718448_+	hypothetical protein	NA	NA	NA	NA
AZG14460.1\|2718678_2719677_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZG15374.1\|2719804_2720758_+	sterol desaturase family protein	NA	NA	NA	NA
AZG14461.1\|2720672_2721176_+	DUF4345 domain-containing protein	NA	NA	NA	NA
AZG14462.1\|2721637_2721973_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZG14463.1\|2722061_2723288_-\|integrase	integrase	NA	NA	NA	NA
AZG14464.1\|2723814_2724846_+	DNA-binding protein	NA	NA	NA	NA
AZG14465.1\|2725132_2725396_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZG14466.1\|2725726_2726257_+	hypothetical protein	NA	NA	NA	NA
AZG14467.1\|2726262_2726586_+	hypothetical protein	NA	NA	NA	NA
AZG14468.1\|2726615_2727251_+	hypothetical protein	NA	NA	NA	NA
AZG14469.1\|2727298_2728030_+	hypothetical protein	NA	NA	NA	NA
AZG14470.1\|2728288_2728927_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AZG14471.1\|2729025_2729757_-	SDR family oxidoreductase	NA	NA	NA	NA
AZG14472.1\|2729769_2730174_-	DoxX family protein	NA	NA	NA	NA
AZG14473.1\|2730267_2730648_+	transcriptional regulator	NA	NA	NA	NA
AZG14474.1\|2730909_2731749_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	4.6e-33	36.1
AZG14475.1\|2731812_2732427_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AZG14476.1\|2732849_2733092_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZG14477.1\|2733339_2733759_-	hypothetical protein	NA	NA	NA	NA
AZG14478.1\|2733742_2735389_-	hypothetical protein	A0A2H4J185	uncultured_Caudovirales_phage	1.1e-09	24.2
2734760:2734774	attL	NA	NA	NA	NA
AZG15375.1\|2735700_2736898_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.5e-96	61.5
AZG14479.1\|2737128_2738817_-\|integrase	site-specific integrase	NA	NA	NA	NA
AZG14480.1\|2738828_2740097_-\|integrase	site-specific integrase	NA	NA	NA	NA
AZG14481.1\|2741619_2742132_+	hypothetical protein	NA	NA	NA	NA
AZG15376.1\|2742513_2742759_-	HNH endonuclease	NA	NA	NA	NA
AZG14482.1\|2742755_2743112_-	RidA family protein	NA	NA	NA	NA
AZG14483.1\|2743122_2744517_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZG14484.1\|2744522_2744876_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
AZG14485.1\|2744865_2746011_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AZG14486.1\|2746310_2747213_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZG14487.1\|2747768_2748059_+	hypothetical protein	NA	NA	NA	NA
AZG14488.1\|2748074_2748842_-	AAA family ATPase	K4HZD4	Acidithiobacillus_phage	3.0e-71	54.6
AZG14489.1\|2748854_2750378_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.4e-149	52.6
2750070:2750084	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3302472 : 3346894

Pseudomonas_phage(15.79%)

tRNA,tail,plate,terminase,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG15420.1\|3302472_3303798_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AZG14894.1\|3303931_3304903_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
AZG14895.1\|3305037_3305859_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
AZG14896.1\|3305855_3307244_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	2.2e-43	34.1
AZG14897.1\|3307423_3308113_+	hypothetical protein	NA	NA	NA	NA
AZG14898.1\|3308203_3308812_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AZG14899.1\|3308863_3309364_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	5.6e-10	32.3
AZG14900.1\|3309429_3310221_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AZG14901.1\|3310261_3311005_-	serine O-acetyltransferase	NA	NA	NA	NA
AZG14902.1\|3311303_3312170_-	RNA methyltransferase	NA	NA	NA	NA
AZG14903.1\|3312406_3313240_+	inositol monophosphatase	NA	NA	NA	NA
AZG14904.1\|3313515_3313704_+	hypothetical protein	NA	NA	NA	NA
AZG14905.1\|3313879_3314059_+	hypothetical protein	NA	NA	NA	NA
AZG14906.1\|3314055_3314295_+	hypothetical protein	NA	NA	NA	NA
AZG14907.1\|3314456_3314714_+	KTSC domain-containing protein	NA	NA	NA	NA
AZG14908.1\|3314930_3315884_+	hypothetical protein	NA	NA	NA	NA
AZG14909.1\|3315996_3316362_+	hypothetical protein	NA	NA	NA	NA
AZG14910.1\|3316721_3317117_+	hypothetical protein	J7HXK7	Pseudomonas_phage	5.4e-08	37.7
AZG14911.1\|3317113_3317473_+	hypothetical protein	NA	NA	NA	NA
AZG14912.1\|3317491_3317677_-	hypothetical protein	NA	NA	NA	NA
AZG14913.1\|3317846_3318353_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A218M393	Acidovorax_phage	3.1e-24	42.2
AZG14914.1\|3318349_3318622_-	hypothetical protein	NA	NA	NA	NA
AZG14915.1\|3319027_3319420_+	hypothetical protein	NA	NA	NA	NA
AZG14916.1\|3319746_3319965_+	DUF2188 domain-containing protein	NA	NA	NA	NA
AZG14917.1\|3319970_3320600_+	hypothetical protein	A0A068CDF3	Rhizobium_phage	8.3e-27	38.1
AZG14918.1\|3320723_3321062_+	helix-turn-helix domain-containing protein	A0A1S5NNJ5	Burkholderia_phage	1.0e-23	54.3
AZG14919.1\|3321964_3322795_+	hypothetical protein	NA	NA	NA	NA
AZG14920.1\|3323051_3323402_-	hypothetical protein	NA	NA	NA	NA
AZG14921.1\|3323583_3324090_-	lysozyme	I6NW41	Burkholderia_virus	2.4e-56	64.3
AZG14922.1\|3324082_3324289_-	hypothetical protein	NA	NA	NA	NA
AZG14923.1\|3324408_3324615_-	hypothetical protein	NA	NA	NA	NA
AZG14924.1\|3324628_3326020_-	hypothetical protein	Q6QI97	Burkholderia_phage	1.2e-46	43.2
AZG14925.1\|3326126_3326522_+	hypothetical protein	NA	NA	NA	NA
AZG15421.1\|3326514_3327096_-	hypothetical protein	NA	NA	NA	NA
AZG14926.1\|3327183_3328323_-\|plate	baseplate protein	B3GAJ9	uncultured_virus	4.3e-50	41.1
AZG14927.1\|3328324_3328705_-\|tail	phage tail protein	NA	NA	NA	NA
AZG14928.1\|3328701_3329373_-\|plate	phage baseplate assembly protein V	B3GAJ7	uncultured_virus	3.3e-13	36.4
AZG14929.1\|3329369_3330491_-	hypothetical protein	NA	NA	NA	NA
AZG14930.1\|3330498_3331455_-	hypothetical protein	NA	NA	NA	NA
AZG14931.1\|3331456_3333394_-	hypothetical protein	NA	NA	NA	NA
AZG14932.1\|3333634_3334108_-	hypothetical protein	NA	NA	NA	NA
AZG14933.1\|3334274_3334664_-	hypothetical protein	NA	NA	NA	NA
AZG14934.1\|3334666_3335098_-	hypothetical protein	NA	NA	NA	NA
AZG14935.1\|3335157_3336678_-\|tail	phage tail protein	B3GAJ6	uncultured_virus	2.8e-84	41.6
AZG14936.1\|3336899_3337727_-	hypothetical protein	NA	NA	NA	NA
AZG14937.1\|3337726_3338383_-	hypothetical protein	NA	NA	NA	NA
AZG14938.1\|3338392_3338821_-	hypothetical protein	NA	NA	NA	NA
AZG14939.1\|3338822_3339215_-	hypothetical protein	NA	NA	NA	NA
AZG15422.1\|3339218_3339470_-	hypothetical protein	NA	NA	NA	NA
AZG14940.1\|3339553_3340873_-\|coat	P22 coat - protein 5 family protein	W6EBZ8	Rhizobium_phage	3.2e-97	54.5
AZG14941.1\|3340939_3341722_-	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	2.6e-46	52.9
AZG15423.1\|3341822_3343211_-	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	1.6e-94	45.8
AZG15424.1\|3343268_3344570_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.2e-158	65.3
AZG14942.1\|3344562_3345036_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.1e-36	62.6
AZG14943.1\|3345066_3345720_-	hypothetical protein	A9YWZ4	Burkholderia_phage	5.3e-69	57.9
AZG14944.1\|3345723_3345909_-	hypothetical protein	NA	NA	NA	NA
AZG14945.1\|3346237_3346411_+	type II toxin-antitoxin system HicA family toxin	A0A0R6PGU2	Moraxella_phage	2.6e-07	51.9
AZG14946.1\|3346477_3346894_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PH90	Moraxella_phage	6.5e-36	60.0

DBSCAN-SWA_6

3354486 : 3366779

Burkholderia_virus(11.11%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG14961.1\|3354486_3354927_+	hypothetical protein	Q6JIG5	Burkholderia_virus	3.7e-50	66.0
AZG14962.1\|3354911_3355220_+	DUF1364 family protein	K7P6U2	Enterobacteria_phage	6.9e-11	40.8
AZG14963.1\|3355251_3355773_+	hypothetical protein	NA	NA	NA	NA
AZG14964.1\|3356029_3356341_+	hypothetical protein	NA	NA	NA	NA
AZG14965.1\|3356361_3357042_+	hypothetical protein	NA	NA	NA	NA
AZG14966.1\|3357112_3358930_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	3.9e-162	47.0
AZG14967.1\|3358926_3359628_+	hypothetical protein	O03965	Myxococcus_phage	3.1e-54	48.3
AZG14968.1\|3359624_3359921_+	hypothetical protein	NA	NA	NA	NA
AZG14969.1\|3359917_3360532_+	hypothetical protein	K7R9L4	Vibrio_phage	6.9e-18	36.0
AZG14970.1\|3360534_3360897_+	hypothetical protein	NA	NA	NA	NA
AZG14971.1\|3360893_3361340_+	hypothetical protein	A0A2H4P797	Pseudomonas_phage	3.3e-22	40.5
AZG14972.1\|3361336_3361996_-	hypothetical protein	NA	NA	NA	NA
AZG14973.1\|3362201_3362906_-	DUF4145 domain-containing protein	M1PSB6	Streptococcus_phage	9.6e-24	40.1
AZG14974.1\|3363485_3364049_+	hypothetical protein	A0A2H4JG39	uncultured_Caudovirales_phage	4.7e-29	58.7
AZG14975.1\|3364123_3365185_+	hypothetical protein	NA	NA	NA	NA
AZG14976.1\|3365177_3366779_+	endonuclease	U6C712	Ralstonia_phage	7.4e-104	43.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP033970

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27843 : 36259

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZG15453.1\|27843_28836_+	glycosyltransferase	F1C5B0	Cronobacter_phage	5.3e-36	32.6
AZG15454.1\|28823_29747_+	formyltransferase	R9S626	Prochlorococcus_phage	6.3e-07	41.0
AZG15455.1\|29757_30810_+	bifunctional UDP-4-keto-pentose/UDP-xylose synthase	A0A2K9KZK0	Tupanvirus	1.1e-15	23.7
AZG15456.1\|30817_31714_+	4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase	NA	NA	NA	NA
AZG15457.1\|31717_34057_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.3e-128	40.1
AZG16932.1\|34113_35559_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.2e-15	24.8
AZG15458.1\|35581_36259_-	response regulator	W8CYM9	Bacillus_phage	3.0e-38	38.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033968

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033969

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP033970

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection