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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP034101 Bordetella pertussis strain BPD2 chromosome, complete genome 0 crisprs csa3,cas3,DinG,DEDDh 0 0 26 0

Results visualization

1. CP034101
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 26684 : 100700 59 Xanthomonas_phage(14.29%) holin,transposase NA
DBSCAN-SWA_2 119123 : 171482 41 Erwinia_phage(25.0%) protease,integrase,transposase attL 157148:157166|attR 177036:177054
DBSCAN-SWA_3 223239 : 276980 49 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_4 283135 : 342435 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_5 357373 : 415446 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_6 946447 : 1016483 60 Natrialba_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_7 1024081 : 1082555 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_8 1111329 : 1171816 52 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_9 1179749 : 1247913 58 Bacillus_phage(20.0%) tRNA,protease,transposase NA
DBSCAN-SWA_10 1311714 : 1377682 60 Streptococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_11 1581085 : 1681197 109 uncultured_Caudovirales_phage(13.33%) tRNA,terminase,tail,transposase NA
DBSCAN-SWA_12 1692484 : 1762153 55 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_13 1832198 : 1900174 58 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_14 1923352 : 1993620 55 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_15 2005838 : 2063201 43 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_16 2242380 : 2310867 59 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_17 2400479 : 2439069 35 Emiliania_huxleyi_virus(14.29%) protease,transposase NA
DBSCAN-SWA_18 3010653 : 3064939 47 Erysipelothrix_phage(33.33%) transposase NA
DBSCAN-SWA_19 3084583 : 3125220 41 Klosneuvirus(14.29%) protease,tRNA,transposase NA
DBSCAN-SWA_20 3172133 : 3227369 50 Lake_Baikal_phage(25.0%) protease,transposase NA
DBSCAN-SWA_21 3231524 : 3298679 60 Klosneuvirus(12.5%) transposase,tRNA NA
DBSCAN-SWA_22 3483638 : 3545940 54 Salmonella_phage(18.18%) tRNA,transposase NA
DBSCAN-SWA_23 3633106 : 3674823 42 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_24 3730287 : 3803157 59 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_25 3806300 : 3873100 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_26 3903486 : 3942675 38 Planktothrix_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage