CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034158	Chryseobacterium sp. H3001 chromosome, complete genome	3 crisprs	DEDDh,cas3,csa3	0	1	0	0

Cas Category Instructions

Results visualization

1. CP034158

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CRISPR-Cas detection and classification

Crispr_ID: CP034158_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034158_1

81846-81924

Orphan

Consensus_repeat	Method
CGGCAAATTTCTGGTTTTTAAATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034158_1

>merge|CP034158|1|81846-81924|CRISPRCasFinder
CGGCAAATTTCTGGTTTTTAAATGCTCATGAATATTTAAAAAAATGCCGCTAAAGCGGCAAATTTCTGGTTTTTAAATG

>CP034158|1|1|81846-81924|CRISPRCasFinder
CGGCAAATTTCTGGTTTTTAAATG	CTCATGAATATTTAAAAAAATGCCGCTAAAG
CGGCAAATTTCTGGTTTTTAAATG

Protein	Signature genes	Signature genes Name	Protein_function
CP034158.1\|AZI66219.1\|75700_76723_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|273467
CP034158.1\|AZI66220.1\|76712_78008_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|376389
CP034158.1\|AZI66221.1\|78019_78877_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
CP034158.1\|AZI66225.1\|81996_82653_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
CP034158.1\|AZI66232.1\|88505_89663_-\|ATP-synthase-F0-subunit-A	unknown	unknown	gnl\|CDD\|237381
CP034158.1\|AZI66227.1\|84537_85395_-\|ATP-synthase-F1-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
CP034158.1\|AZI66230.1\|87625_88123_-\|ATP-synthase-F0-subunit-B	unknown	unknown	gnl\|CDD\|184695
CP034158.1\|AZI66231.1\|88224_88419_-\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|349414
CP034158.1\|AZI66233.1\|89672_90071_-\|hypothetical-protein	unknown	unknown	unknown
CP034158.1\|AZI66223.1\|80114_80654_-\|NlpC/P60-family-protein	unknown	unknown	gnl\|CDD\|366353
CP034158.1\|AZI66226.1\|83028_84387_-\|DUF21-domain-containing-protein	unknown	unknown	gnl\|CDD\|224173
CP034158.1\|AZI66224.1\|80813_81677_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
CP034158.1\|AZI66228.1\|85486_87064_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
CP034158.1\|AZI66216.1\|73064_73778_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|240083
CP034158.1\|AZI66217.1\|74028_74607_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|183878
CP034158.1\|AZI66229.1\|87084_87624_-\|ATP-synthase-F1-subunit-delta	unknown	unknown	gnl\|CDD\|365949
CP034158.1\|AZI68253.1\|82695_83001_-\|ATP-dependent-Clp-protease-adaptor-ClpS	unknown	unknown	gnl\|CDD\|376861
CP034158.1\|AZI66218.1\|74603_75698_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|235471
CP034158.1\|AZI66222.1\|79270_80080_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|236996
CP034158.1\|AZI66215.1\|72311_73064_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996

Protein	Function_ID	Function_description	E-value
CP034158.1\|AZI66219.1\|75700_76723_-\|histidinol-phosphate-transaminase	gnl\|CDD\|273467	TIGR01141, Histidinol-phosphate_aminotransferase, histidinol-phosphate aminotransferase. Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme. [Amino acid biosynthesis, Histidine family].	1.39329e-110
CP034158.1\|AZI66220.1\|76712_78008_-\|histidinol-dehydrogenase	gnl\|CDD\|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	0
CP034158.1\|AZI66221.1\|78019_78877_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	5.70276e-143
CP034158.1\|AZI66225.1\|81996_82653_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	1.76223e-20
CP034158.1\|AZI66232.1\|88505_89663_-\|ATP-synthase-F0-subunit-A	gnl\|CDD\|237381	PRK13419, PRK13419, F0F1 ATP synthase subunit A; Provisional.	4.76015e-78
CP034158.1\|AZI66227.1\|84537_85395_-\|ATP-synthase-F1-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.98663e-118
CP034158.1\|AZI66230.1\|87625_88123_-\|ATP-synthase-F0-subunit-B	gnl\|CDD\|184695	PRK14471, PRK14471, F0F1 ATP synthase subunit B; Provisional.	7.96793e-49
CP034158.1\|AZI66231.1\|88224_88419_-\|ATP-synthase-F0-subunit-C	gnl\|CDD\|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	3.75312e-11
CP034158.1\|AZI66223.1\|80114_80654_-\|NlpC/P60-family-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	4.14941e-33
CP034158.1\|AZI66226.1\|83028_84387_-\|DUF21-domain-containing-protein	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	3.4701e-138
CP034158.1\|AZI66224.1\|80813_81677_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	4.96882e-81
CP034158.1\|AZI66228.1\|85486_87064_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
CP034158.1\|AZI66216.1\|73064_73778_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|240083	cd04732, HisA, HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.	2.17006e-107
CP034158.1\|AZI66217.1\|74028_74607_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|183878	PRK13181, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	1.76811e-95
CP034158.1\|AZI66229.1\|87084_87624_-\|ATP-synthase-F1-subunit-delta	gnl\|CDD\|365949	pfam00213, OSCP, ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.	3.84965e-42
CP034158.1\|AZI68253.1\|82695_83001_-\|ATP-dependent-Clp-protease-adaptor-ClpS	gnl\|CDD\|376861	pfam02617, ClpS, ATP-dependent Clp protease adaptor protein ClpS. In the bacterial cytosol, ATP-dependent protein degradation is performed by several different chaperone-protease pairs, including ClpAP. ClpS directly influences the ClpAP machine by binding to the N-terminal domain of the chaperone ClpA. The degradation of ClpAP substrates, both SsrA-tagged proteins and ClpA itself, is specifically inhibited by ClpS. ClpS modifies ClpA substrate specificity, potentially redirecting degradation by ClpAP toward aggregated proteins.	1.84007e-22
CP034158.1\|AZI66218.1\|74603_75698_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|235471	PRK05446, PRK05446, bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB.	0
CP034158.1\|AZI66222.1\|79270_80080_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl\|CDD\|236996	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional.	1.90623e-156
CP034158.1\|AZI66215.1\|72311_73064_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	7.10434e-152

>CP034158.1|AZI66224.1|80813_81677_+|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MTLEKLKTYLINEISGQYSETESNLLFGLFVEKYLGLNSIQQRAEKQLKLSAPQTELFEKAIMELKNGKPYQQILGETVFFGLKFFVDENVLIPRPETEELLELAIEKIKKNAVLRANFSLLDIGTGSGIIPIVLKKHFPEAQISALDFSEKALKTAQKNADFHQVEINFMHQNYLEEDLTEVYDIIISNPPYIAIEEEDEIAASVKEFEPTMALFSPTSNALVFYEKIAKDCGKNLSANGMVFLEINQKLGKETAEVFKDVLEEVHLLQDISGNERMVWGRKTVDS
>CP034158.1|AZI66223.1|80114_80654_-|NlpC/P60-family-protein
MKRYLMIAFSAVVLVSCGSARPAVVKREAPTKTVKRAENLKVLESYYSGKNSALVSELINDAHKYLGAPYKYAGNTSSGFDCSGLVAKVFDENKMSLPRRSEDQSKTGVEIKIQEAKPGDLVFFATSGGSRVTHVGIVNDIGRDGEVKFIHASTSKGVIISSLNEKYWNNAYLFARRVL
>CP034158.1|AZI66222.1|79270_80080_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MLQQTIENIWDNRELLQNEDSQKSIREVIRQLDLGELRVAEPTENGWKVNEWVKKAVVMYFPIQKMETIEVGPFEFHDKMPLKRNYAEKGVRVVPHAVAREGAFIASGVILMPSYVNIGAYVDSGTMVDTWATVGSCAQIGKDVHLSGGVGIGGVLEPLQAAPVIIEDNVFVGSRCIVVEGVHVEKEAVLGANVVLTASTKIIDVTGETPVEIKGRVPARSVVIPGSYTKQFPAGEYQVPCALIIGQRKESTDKKTSLNDALRENNVAV
>CP034158.1|AZI66221.1|78019_78877_-|ATP-phosphoribosyltransferase
MSKLKIAIQKSGRLSEKSLELLKECGITFPDFKSKLKNSATNFPLEILFLRDDDIPKYVEQGIVDIGIIGENEVLEQDKNVVVVRKLGFANCRLSLAIPKETEYSTLNFFEGKKIATSYPIIVRNYFQNKNISAEIVEISGSVEIAPSIGLADTIADLVSSGGTLLHNGLKEVEEILRSEAVLISNENLPAESEIILESFLFRIQAVINSRENKYILLNAPNDSIDQIINILPGMKSPTVLPLAKSGWSSIHSVVRENEFWQIIDELKKCGAEGILVIPIEKMVL
>CP034158.1|AZI66220.1|76712_78008_-|histidinol-dehydrogenase
MKNILKYPAKNTWENLLQRPALEKKDLRKTVEEIFLKVKNDGDSALKEFSAKFDQVNPENLAVSHQEIESAENQISEELKIAIAQAKENIYQFHFAQKEKSEEIETTEGVFCWRESRAIEKVGLYVPGGTAPLFSTVLMLAVPAQIAGCQEIILCTPPQKDGKINPAILYTANLCGVTKIFKVGGAQSIAALTFGTESILKVDKIFGPGNQYVTQAKQLAMEYNVAIDLPAGPSEVLVIADEGANPEFCAADLLSQAEHGVDSQVIFLATNEQILEETLAEIENQLLKLPRMEIAKIALNNSQFILLNSVQEALELSNLYAPEHLILAVDNPRTWVSKITNAGSVFLGNFTPESAGDYASGTNHTLPTNGFAKNYSGVSLDSFVKRITIQEISKKGIQNIGKTIEIMAEAEGLTAHKNAVSLRLKSLENGI
>CP034158.1|AZI66219.1|75700_76723_-|histidinol-phosphate-transaminase
MEFNLEKLVRPHLKDLKSYATLRDIYVGEKMFFLDASENPFGEFNRYPQGNPVDLKTCLAKINGVKEANLFLGNGSDELIDFTQRIFCEPGKDSILMMNPSFVMYEIYAKMNNLKIEKLNLNSDFQLEKSAFLQTVSKTEAKLLFLCSPNNPTGNAIEDLEFYIQNFSGIVVVDEAYIEFSKEVSAVKLLEKYPNLIVLKTLSKAYGMAGLRIGIGFASEEVARLYNRFKPPYNISSESQKLALEQLKNLPQIEENISKILAEKERLKNSLSQISQIVKIYPSEANFFLVEFKDAEFAYKKLLENKILTSLRHPALKNCLRISVGTTEENSKLLNVLAQI
>CP034158.1|AZI66218.1|74603_75698_-|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB
MRKVLFIDRDGTLIIEPPEDFQVDSLEKLEFYPKVIQNLAKIVTELDYELVMVTNQDGMGTDSFPEENFRLPQEKMLKTLANENILFSDILIDKSFEAENSPNRKPRTGMLQKYIYGNYDLENSYVIGDRKTDVELAKNLGTKSIFIGEENLEGATLTTRNWDEIYRYLKQIPRKAKVQRKTKETEISVELNLDGSGKSRINTGLAFFDHMLEQISKHGNFDLEIQVNGDLEVDEHHTIEDTALVLGTCFSEALGSKKGIERYAFALPMDDCLAQVALDFGGRNWLVWDVEFKREKIGDVPTELFFHFFKSFTDTGKCNLNIQCEGENEHHKIESIFKAFSKVLRDAVKQNQTNFSIPSTKGLL
>CP034158.1|AZI66217.1|74028_74607_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MIAIIDYVAGNVKSVQNAVEKLGFKTIITSDFEEIKNAEKVIFPGVGEASTAMKYLKNLKLDELIPTLKQPFLGICLGQQLLCNFSEEGNTKCLGIFDLNVKRFPATDIVPHMGWNNLQKMTGDLFEGISVEDNLYFVHSYYCEIGENTTSECDYILPFSATLQKENFYGTQFHPEKSGTVGAKILENFLNI
>CP034158.1|AZI66216.1|73064_73778_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MKIIPAIDIIDGKCVRLSKGDYDTKKIYHENPLDIAQEFEANGIRYLHVVDLDGAKAKSIKNLKTLEILAAETALIIDFGGGIKTRQDLENAFSAGANQVTIGSIAVENPEICAQWLQEFGAEKLILGADCLDRKIKTSGWLTESDLEVLDFIQDYQKKGIQSVICTDISKDGMLQGPSFELYTEILKQTKIALIASGGISSIEDVEELKNIGCAGAIIGKALYEGNISLKDLQKFL
>CP034158.1|AZI66215.1|72311_73064_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MLKKRIIPCLDIKDGKTVKGVQFEDLRIAGDPVELAKKYVNDGADELVFLDITATLEGRKTLIELVEKLSLEINIPFTIGGGISSVQDVEALLKAGADKVSLNSAAVRRPELIREIAQQFGNQCVVVAIDTKNIEGEDSVFISGGKIKTDWKTLDWVKTVTELGAGEILLTSMDFDGTKNGFDIRMLQNVSAICPLPIIASGGAGRMADFTELFNETKVTGALAASIFHFNEITISDLKSNLKMNKINIR
>CP034158.1|AZI66225.1|81996_82653_-|rhomboid-family-intramembrane-serine-protease
MSPVLLIIIAATAIISYYAFSNQAVFEKYKFNVGAIKRDKEYIRLLSAGFLHADLMHLLFNMMTLYFFGPIVIEVFGTVGFLLVYFGSILLGNIFSLYLYQNQSWYSAIGASGGVSGILFASIAMIPDLGLYLFFIPIAIPGYIFGTLYFAYSVYMMLNPRQHDNIGHAAHLGGAFFGLVYAILVQPERALHNIMFLAIMSLPLLYMAYMVFVKKKIG
>CP034158.1|AZI68253.1|82695_83001_-|ATP-dependent-Clp-protease-adaptor-ClpS
MFYPVNIKDYENPQREYEEEVALLEREDEVYKLVLWNDDVNTFDYVIEALIEICEHTLEQAEQCTILVHYKGKCTVKTGSLEKLKPMHEKLLARSLTSEIV
>CP034158.1|AZI66226.1|83028_84387_-|DUF21-domain-containing-protein
MDSDILKLVLALFLVLLNGFFVAAEFSIVKVRYSQIQLKAAEGHSMAKQAEHIIKHLDEYLSATQLGITLASLALGWVGESAMHHVIENMFHYFHLAVPAATVTTISLVLSFLLITIMHIVFGELIPKSIAIRKSEPTAMVIAMPLRIFYTIFKPFIWTMNKMSNGVLRLMKIHPASDQEIHSTEELQLLVKQSADSGEIEEENYEIIKNAFDFTDHSAKQIMVPRQNISSIDLDEPVEDIISTIMEGGYSRLPVYRDSIDNIIGIFYAKEIIREYVKRKGEITHADLENLMRDAFFVVGSKKISDLLKVFQQKKQHLAVVIDEFGGTEGIVTLEDILEELVGEIQDEEDDEEKIVDKVGENVFWVKATQPLDEINEKLPKRFPLSEDGEYNTLAGYILHELEDIPGENQEFVINHYQIKILKMQNKSVDLVELVYEEPNILSDLENEMGEI
>CP034158.1|AZI66227.1|84537_85395_-|ATP-synthase-F1-subunit-gamma
MANLKEIRGRITSISSTMQITSAMKMVSAAKLKKATDAIVMLRPYSEKLQEIIENVSATTDLEGVSTYTEAREVKKVLYIVITSNKGLAGAFNSSVIKQLNQNLANIAEEVEILTIGKKVYDSVRRSRNVYDNQSSIFDKMSFEAVSKFVENVMRDYREGSFDKVYVVYNKFINAATQQVQTEQILPIRMPEQKEAVNTDYLFERNAKEILDVLMPKSIKTQIYKAILDSIASEHGARMTAMHKATDNAEALRNELKIFYNKARQAAITNEILEIVGGAEALKNS
>CP034158.1|AZI66228.1|85486_87064_-|F0F1-ATP-synthase-subunit-alpha
MAEINPAEVSAILKQQLANFDTQSNVEEVGTVLTIGDGIALVYGLENVQYGELVKFQSGVEGIVLNLAEDNVGVALLGESKLVKEGDTVNRTNKISSIKVGEGMLGRVVDTLGNPIDGKGPITGETYEMPLERKAPGVIFRQPVTEPLQTGIVAIDSMIPVGRGQRELIIGDRQTGKTVVAIDTIINQREFYDAGEPVFCIYVAVGQKGSTVAQIAKTLEDKGALAYTVIVAANASDPAPMQVYAPMAGAAIGEFFRDTGRPALIIYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKVIKDDNIAAQMNDLPDSLRPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQYKELEAFAKFGSDLDASTQAVISKGERNVEILKQPVNSPLPVDSQVAMIYAGTENLLRNIPINKVKEFQKEYVEFLRSKHPETMAAIKAGKIDNDITGVLKQAATELASKYN
>CP034158.1|AZI66229.1|87084_87624_-|ATP-synthase-F1-subunit-delta
MVTSKVAKRYAQGLLNFTQEAGMTASVLPEMKDLVNTIEKSRDLQSFFGSPIVDAKKKVSIAREIFKDFSPVTRNLLEMVIKHGRESHLRNIGQEFINKVEDMNGVQRITLTSATALSQENIQNILKSTHLVNHQNQFELKSIIKPEILGGYILRVGDQQVDASVKSKLNRLKKEFQLN
>CP034158.1|AZI66230.1|87625_88123_-|ATP-synthase-F0-subunit-B
MGLLEDFSSGLFIIQSVIFLIVLFVLYKFAWKPIMEAVNEREITIVDSLNQAKLARQQVENLKAENDIIIREAKVERDQILKEAREIKDRIVGEAKDAAKAEGDKMVEAARQTIQAEKAAAVADIKNQIGALSINIAESILKKNLDNDSAQNDLVEKILNTSNLN
>CP034158.1|AZI66231.1|88224_88419_-|ATP-synthase-F0-subunit-C
MEIPKLVGAGLVVIGAGLGIGKIGAAALEGMARQPEQAGKLQTAMLIAAALVEGLAFAALFAVN
>CP034158.1|AZI66232.1|88505_89663_-|ATP-synthase-F0-subunit-A
MYSDYLCYFCKTLKRYIVMLKKVILLVGFLSTFSLSTAQDHAEHAAVATEQVSTPVSDAEREKAENQEFIQHHVKDAHSFDIMVTKDGHHIGFPLPVIFYDVENGFHSMMSSAFNHGESVVESKGSHYKLFHEKIYKTDASGTIEMDEHGHAKNAKMMDFSITKSVFVILLVSILMILIFTSIARGYKNSLVPSGAGKILEPVIIFIRDDIAKPNIGINYKKYMGYLLTVFFFILFLNMLGLMPFGINVTGNLAITASLALITFLITQFTGNKTYWQHIFWMPGLPWPMKIVMMPIEIIGMFIKPFALLIRLFANMTAGHIVVMSLIAMIYVFKNIIGGVAFPFLTFVLYLLEILVAFLQAYIFTMLSAVYFGMANEEHHHEEAH
>CP034158.1|AZI66233.1|89672_90071_-|hypothetical-protein
MKIIATTFYVILYFLMLLAHLGLWKYLEIGHDLVFLRYYIFLTLLFVMVITVLTIIRRMFPKYIGFGFMGLVMVKMMALFIVMNQLDLSAVPNYKMHFAIPYLVSLLLETLYAVKLIQIEDKGAAEKDEKNQ

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Crispr_ID: CP034158_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034158_2

804522-804620

Orphan

Consensus_repeat	Method
TGCACGAATGTCCTTAATTAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034158_2

>merge|CP034158|2|804522-804620|CRISPRCasFinder
TGCACGAATGTCCTTAATTAAATTGGAAAATATGCGGATAAAGCGGCGAATTTTTCTGGTTTGGAAATGCCACGGGTGCACGAATGTCATTAATTAAAT

>CP034158|2|2|804522-804620|CRISPRCasFinder
TGCACGAATGTCCTTAATTAAAT	TGGAAAATATGCGGATAAAGCGGCGAATTTTTCTGGTTTGGAAATGCCACGGG
TGCACGAATGTCATTAATTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP034158.1\|AZI66814.1\|804734_805595_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|238806
CP034158.1\|AZI66817.1\|808865_809858_+\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845
CP034158.1\|AZI66822.1\|812988_813402_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|235450
CP034158.1\|AZI66807.1\|796514_798023_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377019
CP034158.1\|AZI66816.1\|808395_808842_+\|hypothetical-protein	unknown	unknown	unknown
CP034158.1\|AZI66805.1\|792856_796219_-\|transcription-repair-coupling-factor	unknown	unknown	gnl\|CDD\|224118
CP034158.1\|AZI66808.1\|798015_798354_-\|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
CP034158.1\|AZI66811.1\|801494_801977_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP034158.1\|AZI66820.1\|811348_811891_-\|exosortase-family-protein-XrtF	unknown	unknown	gnl\|CDD\|275001
CP034158.1\|AZI66821.1\|811943_812966_+\|aminoglycoside-phosphotransferase	unknown	unknown	gnl\|CDD\|225719
CP034158.1\|AZI66813.1\|802901_804473_+\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|215436
CP034158.1\|AZI66812.1\|802235_802865_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
CP034158.1\|AZI66806.1\|796286_796505_+\|hypothetical-protein	unknown	unknown	unknown
CP034158.1\|AZI66823.1\|813398_814112_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133044
CP034158.1\|AZI66810.1\|799902_801492_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
CP034158.1\|AZI66818.1\|809933_810974_+\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
CP034158.1\|AZI66804.1\|792178_792742_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
CP034158.1\|AZI66819.1\|810924_811362_-\|exosortase-F-system-associated-protein	unknown	unknown	gnl\|CDD\|275000
CP034158.1\|AZI66809.1\|798440_799679_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP034158.1\|AZI66815.1\|805810_808315_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657

Protein	Function_ID	Function_description	E-value
CP034158.1\|AZI66814.1\|804734_805595_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	5.24214e-135
CP034158.1\|AZI66822.1\|812988_813402_+\|ATP-binding-protein	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	1.56238e-21
CP034158.1\|AZI66807.1\|796514_798023_+\|hypothetical-protein	gnl\|CDD\|377019	pfam03321, GH3, GH3 auxin-responsive promoter.	2.53055e-94
CP034158.1\|AZI66817.1\|808865_809858_+\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	3.36847e-166
CP034158.1\|AZI66805.1\|792856_796219_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
CP034158.1\|AZI66808.1\|798015_798354_-\|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.26785e-17
CP034158.1\|AZI66811.1\|801494_801977_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.68802e-75
CP034158.1\|AZI66820.1\|811348_811891_-\|exosortase-family-protein-XrtF	gnl\|CDD\|275001	TIGR04128, hypothetical_protein_HMPREF0204_10576, exosortase family protein XrtF. Members of this protein family are exosortase-related proteins found always in association with a member of family TIGR04127, a small, hydrophobic, uncharacterized protein limited to the Bacteriodetes. Exosortases are proposed transpeptidases with a cysteine active site (3.4.22.-), but usually are associated with specific C-terminal target motifs (PEP-CTERM, PEF-CTERM, PGF-CTERM, etc).	1.51256e-60
CP034158.1\|AZI66821.1\|811943_812966_+\|aminoglycoside-phosphotransferase	gnl\|CDD\|225719	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only].	1.49924e-08
CP034158.1\|AZI66813.1\|802901_804473_+\|L-aspartate-oxidase	gnl\|CDD\|215436	PLN02815, PLN02815, L-aspartate oxidase.	0
CP034158.1\|AZI66812.1\|802235_802865_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	1.00899e-53
CP034158.1\|AZI66823.1\|813398_814112_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	1.15149e-61
CP034158.1\|AZI66810.1\|799902_801492_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
CP034158.1\|AZI66818.1\|809933_810974_+\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	5.19803e-60
CP034158.1\|AZI66804.1\|792178_792742_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	2.18166e-85
CP034158.1\|AZI66819.1\|810924_811362_-\|exosortase-F-system-associated-protein	gnl\|CDD\|275000	TIGR04127, conserved_hypothetical_protein, exosortase F-associated protein. Members of this protein family are always found next to an exosortase/archaeosortase-like protein, and occur so far only in the flavobacteria, within the Bacteroidetes. Members do not have an obvious PEP-CTERM-like C-terminal protein sorting domain.	2.13765e-30
CP034158.1\|AZI66809.1\|798440_799679_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.48071e-57
CP034158.1\|AZI66815.1\|805810_808315_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.84135e-24

>CP034158.1|AZI66813.1|802901_804473_+|L-aspartate-oxidase
MIKADVLVIGSGISGLSYAIKVSEKMPEAKIIIVTKGDEDESNTKYAQGGLAVVTDFDNDGFQKHIDDTMRAGDGENNLEVVKMVIEKGPERFKELVEWGTNFDQKDGNLMLGREGGHTENRIVHHKDITGKEIERALLETANKSPNIEIMAHHYVIDLITQHHVPGKIFDLNKIDCYGAYILDEKNKKIKKITAKITLVATGGAGHVYKNTTNPIIATGDGIAFVHRARGKVSNMQYYQFHPTALYSKRDGMLFLISEAVRGDGAKLRTKDGEKFMHKYDEREELASRDIVARAIDNELKISGDDYVGLDCREMDREKFIEHFPNIYEKCLDEGIDPFEQLIPVVPACHYLMGGIDIDRDGQSSIKNLFAVGECTNSGLHGANRLASNSLLEGLVFGHNAAIKTVELLTVNDFNFDDLKAVPEWNEEGMKMMDEMVMVSYLRRQLQEMMSDLVSIVRSNDRLALAKKKQQEIFEAVTELYNYSILSPKLSELRNLTNISYLIIKHSLMMKENKGAFFNKDFV
>CP034158.1|AZI66812.1|802235_802865_+|NAD(P)H-dependent-oxidoreductase
MNYLEALQKRYSVKKFDPEKTVCADALYQILEAARLSASSLGLQPYKLIIAQSAEIKEKLIPAFYNPSQISTCSHLIAIVSKNKIGNEYIGDYFKHISATREIPVENLNPFRQSIDSHMNRLTPEEIRIWAEKQCYIVLGNLMFAAALENVDTCPMEGFRQEIIDQVLGLNSENEKVAVTLALGYRSQEDPFQTLKKVRKPTEKLFKFL
>CP034158.1|AZI66811.1|801494_801977_+|ribonuclease-HI
MSLKIEIFTDGACSGNPGKGGYGIVMKVPEKNYEKRYSAGFRLTTNNRMELLAVIVALEKLKSTENDIHIYTDSKYVSDAINQKWIFGWIKKGFKNVKNPDLWRRIVPLLKSHNPTFHWVKGHAGHPENEICDQLAVKAAQSPTLEIDDFFEAQKSGGLF
>CP034158.1|AZI66810.1|799902_801492_+|replicative-DNA-helicase
MTQKETLSSLIHGNFAKELSISDGKMPPNAIEFEKLVIGTFLIDKKGLDYSIDLLTPEVFYDPRHQEIFRAIVRLFEGNHPVDLMTVIQELKKTEKLAFAGGDHYIIDLTMGISSSAHIEYHVRVILEKFILRSLINVSANVIDSSYKESTDVFELLDKAEQSFFEITNGTIKKGFDTANTLVTQAIETIKALKDKEGISGIPSGFKDIDKETGGWQNSDLIIIAARPAMGKTAFLLSMARNIAVEHNVPLALFSLEMASVQLITRMIASETGISSEKLRKGQMSDEEWQRLFSNVSALENAPLYIDETPSLSVFDFRAKCRRLVMQHGVKIIMVDYLQLMTANSGKGGAGNREQEIAMISRSLKAIAKELNVPVIALSQLSRSVETRPGKRPMLSDLRESGAIEQDADIVSFIFRPEYYKITTWDNDEDGAETSTENQAELIIAKHRNGATADVRMSFYKNIAKFADLDLFGGGYGYESSNFGQQDAPSGFEKIKTTIDPGAAFDISDNKNLSGSSMNDLDDDDDFQF
>CP034158.1|AZI66809.1|798440_799679_+|MFS-transporter
MISLQPLQTLKIPEFRNLMSGRFFLVLSFRMLATLMGWWIYKLTNDPFAIGLIGLSEVIPAVSTALYAGHVIDNSEKKKLLLICNYAYVFLIGLLAIPAFFGSSFMHLTNLQISYFIYAIIFCTGFCRAFIGPIVPAMIPKIVSREQLPNAITLNQATFLTASVSGHALGGFLIHWVNISGTILVIVGVMIFASMFFWFLKQHPSENSDRTLGVVKSMKEGLAYIYKTKEILGALCLDMFAVLFGGAVAMIPVFATDILKVGSEGFGLLNAASDIGSMCIIMTLAFVPLTKNQGKILLVAVAGFGLCIIGFGLSKLYWLSFFLLVASGMLDGISVVIRGTIVQLKTPDHIRGRVLSVNSIFIMSSNEMGQFESGLAAKLLGVVRSVVFGGTMTVLIALLVGTTVPKLRRMNY
>CP034158.1|AZI66808.1|798015_798354_-|QacE-family-quaternary-ammonium-compound-efflux-SMR-transporter
MNWILLIIGGLFETGFALCLGKAQETTGKESYFWWAGFAVSLFLSMFLLYKAISVGEQPIPIGSAYAVWTGIGAVGAVFTGILFFNEPVTFWRMFFVFTLIASVVGLKAVSN
>CP034158.1|AZI66807.1|796514_798023_+|hypothetical-protein
MVNFLKKNIALLWAKKHVKGTKAFKQNAVEDQQKLLLSLVKTAEKTLFGRHHQFEDIKNIEDFQAKVPVADYEELKPYIEKVKKGQRDILWTGTPEYFAKTSGTTSGAKYIPISKEGMPYQISAAQSAIFHYIAQKNNADFVNGKMIFLQGSPALEEIYGVKTGRLSGIVAHHIPSYLQKNRLPSLETNLIEDWETKVDAIVKETEKENMTLISGIPPWLIMYFEKLIERNGKKITELFPNLQLIITGGVNYEPYREKMTELLGKNVDTLQTFPASEGFFAFQDDYKKDGLLLLTNHGIFYEFIPLEEFGKPDARRLTLKDVELHKDYALILTTNSGLWAYSIGDVVRFISKNPYRVLVSGRTKHFTSAFGEHVIAFEVEEALKATVEKMPAQITEFHLAPQVNPEEGLPYHEWFIEFEKEPADLANFRDFLDSEMRKRNTYYDDLISGKILQPLIITNLKKNAFQDYAKSEGKLGGQNKIPRLANDRKIGDYLGKFKKQLS
>CP034158.1|AZI66806.1|796286_796505_+|hypothetical-protein
MRDAANLRKYFFAAFQAFFLFFSLVNFFQTFYLLFGHFFLFLSFFLLFSFLFLLFTFYFLLFKYFHPFYYLA
>CP034158.1|AZI66805.1|792856_796219_-|transcription-repair-coupling-factor
MQLKKITETFLPQLLHLGFGKELFTQLEEHRHLAVKSFAGSSPAVFAAELFLIKKKSILFLTDDKEDALYITSELEDLLGKENVLYFPPTHLDPYQIEKTQNANLVLRTEVLNRIHNDKKPRVMIAPFASLAEKVMKKDDFKAISHTIKAGDQLDFDFTEELLHQFSFNLTDFVSEPGEFSVRGGIVDVFSYSNEEPYRITFFGNEVESIKTFDIETQLSKAKIKEFQLVSNMNFSAIGKKVSLFDLAPKDLVVVTKNAFAGLNFIKNFYEKAEERFGTLSTEIKHQTPEELFISEEDFSKDINKFEWIDFTLQEVKNSDAAVIQLNQTPQPSFHKKFDMLQEDLEEKQNEGFETWISFSTEKQKERLEAIFEELEKNVPFKSFKSELHEGFVDFEHKISVYTDHQIFDRYQRYKAKNTFAKSEQITLKDLMQMKVGDYIAHIDHGIGKFMGLVKVNNNGKIQECFKLVYKNGDLLYVSIHSLNKISKYNGPDGREIVLSKLGSPAWKSLKQKTKAKVKQIAFDLIRLYAERKTAKGFAFKPDSYLQNELEASFIYEDTPDQEKATIDVKTDMENETVMDRLICGDVGFGKTEIAIRAAFKAATDGKQVAILVPTTILAFQHYRSFMERLKDFPVTISYMNRFRSAKQKAETLEGLKSGKIDIVIGTHQLVGNSVKFKDLGLLIIDEEHKFGVSVKDKLKTIKSNVDTLTLTATPIPRTLQFSLMAARDLSVIKTPPPNRQPVETQIVGFNEEIIRDAISYELQRDGQVYFINNRIENLKDIAGLIQRLVPDAKVITGHGQMDGKQLERNVLDFMEGKYDVLVSTTIIESGVDVPNANTIFINDAQRFGMADIHQMRGRVGRSNRKAFCFLITPPFDMVTSDARKRLEAIEQFSDLGSGFQIAMKDLEIRGAGDLLGGEQSGFINEMGFDTYQKIMQEALEELQNDEEFEDLFDNEEDRKKLFKSNKEVNIDTDLELMLPDSYVQSIEERLSLYQKLAEIESKEELKKMESELIDRFGKLPPEAVNLLKSVELKWIASEIGFDKIVVKNGVFLGYFPQNPQDKFYQSEKFRKIIAYLTAYPSEATLKEKSSKEGNQLMMRKENVQNVDEVNAVLERILAK
>CP034158.1|AZI66804.1|792178_792742_-|aminoacyl-tRNA-hydrolase
MKYLIVGLGNKGEEYEETRHNVGFKIAEKIAETLEVPFKSSNFGLLAEGKYKGRKVLILKPDTYMNLSGNAVKFWLQKENISLENLMIITDDLALPFGTLRMKMKGSDAGHNGLKSIQEQLQTQNYPRLRFGISAEFPEGKQVDYVLGKWEGEEKEKLPERIEKFSKACLSFVFAGIQNTMTAFNGK
>CP034158.1|AZI66814.1|804734_805595_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MKKPKYVTKEALKHFIKNALEEDIQEGDHSTLATIPKDLQQKAKLLVKQNCILAGVELAEIIFKQFDKHLKVDVLLKDGDSAKAGDIALYVTGSARSILSTERFVLNCMQRMSGIATLTHDWDSRLVGTKTKLLDTRKTTPNFRICEKWAVAIGGGTNHRYGLYDMIMLKDNHIDYNGSITKAVKMAKEYTEKIKNPLKIEVETRNLEEVEEALNAGADRILLDNMDVQMMKDAVKMVGGKCETEASGGITRDMLKAIAATGVDYISAGALTHSADNIDLSLKAVK
>CP034158.1|AZI66815.1|805810_808315_+|TonB-dependent-receptor
MNFRPVKKSMLTVVLTLSTASVYYAQTARDTVSREKDIEQVVLTGVADIAKDRKTPVAVSTIKEAQIIDKLGNQEFPEILNTTPSVYATKGGGGFGDSRINVRGFDQRNTAVMINGVPVNDMEGGAVYWSNWAGLSDVTSAMQVQRGLGSSKLAIASVGGTINVLTRAADKKRQGNVTLGIGNDGYNKQLFSYNTGKSETGWATSFLMSRTAGSMYADGTEFEGYNYYLAVGYQPNAKHDLQFTITGAPQVHNQRSFQSTINDHIKYGGTEEEPNRRYNQNWGYLNGEEYSMTRNYYHKPVISLNWDWKITQATTLNSVAYASFGRGGGTGDAGRINGVFYNNLPRTADGLVRFDDIVAWNKGALVPDFGAVNKTPGMASSSNGIIRRSSINSHNWLGLITSLNHKINDNLTATVGLDGRTYKGIHYRIVTDFLGNNSYTDTSNINNKPNVITNAFTTNPSWNPFGGKTNDIKDQLAYSNDGIVNWLGGFGQLEYTNDALSAFVQGSVSNQAFQRIDYMLYAPENQKSEKVDLVGFNVKGGANYNINENHNVFVNGGYYERQPFFGAVFLNNRNDVNPSLTNEKITSFEVGYGYRSSIFNANLNLYNTSWDDIYRRLTTRGKLNGVDVTGVANVLGIKEIHRGIELDFNVKPAQFVTLNGMFSVGDWFFEGSPTASFVEDQTNTVIQEGTLALDGLKVGDAAQLTAALGADFKLTDWLNFDAQYRYADKLYSAFEPSSRLVTASKPTPSDPAVELPSYGLVDLGAGARFKLNDTQSFKLRLNVNNVFDKTYIAESRTNKAADVNPANNWNGINKANEVFFGFGRTWNASVSFLF
>CP034158.1|AZI66816.1|808395_808842_+|hypothetical-protein
MDTFKIITEAHKGFAYLILLAGIIFVVALLVTMFGYSGKISKLLRKSTLFTMILFHIQLIVGILMLVFSPGLKGALESGTLMSNAAARFSYVEHPVSMLIGVILMTIINKYMKTNETLAMKIVIMGVIAFALFAYAFPWARVFPSLFA
>CP034158.1|AZI66817.1|808865_809858_+|aspartate-semialdehyde-dehydrogenase
MKIAVVGATGMVGQIMLKVLEERNFPVTELIPVASEKSVGKKILFKGNEIEIVSMQDAIDRKPQIALFSAGGNTSLEFAPKFAANGTVVIDNSSAWRMEADKKLVVPEINADVLTKNDKIIANPNCSTIQLVMVLHPLNKNFGLKRVIISTYQSVTGTGKNAVDQLNAEILGDKQVKKVYNYDIFKNALPQCDVFADDDYTKEEIKLMTEPKKILGDDSFNISATAVRVPVQGGHSESVNVEFENDFNLDEIREILSNTPGVVVLDDVKNNIYPMPLYSEGKDEVFVGRIRRDLSQPKTLNLWIVADNLRKGAATNAVQIAEYLYKNQLV
>CP034158.1|AZI66818.1|809933_810974_+|cation-transporter
MSDNKNPSVNNFSFQRNVAIIGIALFLGKLLAWHFTNSDAVFSDAMESIVNIIAAFMGLYSLYLAAKPKDVDHPYGHGKVEFVTSGVEGALIIFAGVIIIVQAFDSLLHGNIPKQLDWGIAIVAATAVINYLMGHISFKKGVRENSLVLQSSGAHLQSDTFTTLGVVISLILVQITKLYWIDAAVAFLFGAYIMYVGYTIIRKSLSGIMDEADEDMLKRLAKFLDDRRLPQWTDLHNVRIQQHGSGLHIDAHLTMPWYYELRRAHQEMEDIYKLVGESHDRAIEFNFHLDDCKPSSCAICMLFECPVREHAFAGRVEWNVNTITQENKHTINDLPAPGANGNKKAE
>CP034158.1|AZI66819.1|810924_811362_-|exosortase-F-system-associated-protein
MKLLKWFLVALGVFGLIAVRMLEDRLFYDPFQAYFHLANEDAIFPNFEWSPLIFGYIFRFFLNLALSTFIVHIIFNNQRWTLQAAVLIAVVFLITFPIYLYCIHTRFEIGYLFSFYMRRFVIQPLILLLIIPLFYYRSHLEQASH
>CP034158.1|AZI66820.1|811348_811891_-|exosortase-family-protein-XrtF
MFSDFQPVLKVLLRFVTIYVVMVLLYQLYLNQYENNGLDAFSTWVMKQVDYLQNLLGYPSEMVPGKPEEETSWFFVSGKYVSRMVEGCNAVSVMILFLSFIFAFYKGAKTFVFVGLALVALHIMNVLRIVGLNILLVEMPQYSKIGHDYLFPAIIYGSVVVLWLIWIKLFALKETADEAA
>CP034158.1|AZI66821.1|811943_812966_+|aminoglycoside-phosphotransferase
MTAHEAQSFLEIFFGAKSADFYVLPQSGSSRHNFIGTINDQKYVVTYNENIPENEAFFYFSSVFSELNLNTPKILKISEDRKLYIQEFVGQQTLSEIIAAEGQSQRVEKLVKNALSQLAKTQKKTQNALNFSKTFEYREYGELAITNDLFYFKSFIADVLELPYHKSSLLQEFKNLIQKIEKLSPRSIMIRDFQSRNIMVNENDEIYFIDYQSLMEGPLMYDVISFLFQAKANFSADFKQKMLDYYYSLWDDEKQVSELKNSLHYLQLIRFLQVLGAYGFRGLIQRKAHFMESLQQGISNLQNFSKSWEEMHKYPELLKLIQSLNAPETQLKINNILSNS
>CP034158.1|AZI66822.1|812988_813402_+|ATP-binding-protein
MSLKIEIHSFSYKKGGIPKDNSGNGGGFAFDCRGVLNPGRLEEFKAQTGCDTGVQQFLEKSTKMPEFLDAVKNIISINIENYLSRGFENLQINFGCTGGQHRSVYAAEKIAEFIREKYPEASFSINHDEQPQLNLNS
>CP034158.1|AZI66823.1|813398_814112_+|nucleotidyltransferase-family-protein
MKALIFAAGKGTRLKPFTDHHPKALALVNGVPLLERNIKYLQSYGINDFVINIHHFGEQIREFLQKNNNFNARIELSDEKDQLLETGGGLLFAQKFLDGDKDFLIMNADILTDLDLNLFIKYHQEKKDFATLAVSDRKSSRKLLFNADMVLKGWLNVESGEQRLAEFNKGFKALAFSGIHCINPQIFRKIKRRGKFSIMEEYLDLMMTASIFGYEHSAHIVDVGKPESIAAAEKIFK

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Crispr_ID: CP034158_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034158_3

1946288-1946426

Orphan

Consensus_repeat	Method
TCCCGCTTAATTATTTGCATTTTTTACCTGCTAAAACGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034158_3

>merge|CP034158|3|1946288-1946426|CRISPRCasFinder
TCCCGCTTAATTATTTGCATTTTTTACCTGCTAAAACGGTAAATTTTTTCGTTTAGACTTCCATGCAGATCCGCTTAATCTGCAAATCCGCGAGAAAATTCCCGCTTAATTATTTGCATTTTATTACCTGCTAAAACGG

>CP034158|3|3|1946288-1946426|CRISPRCasFinder
TCCCGCTTAATTATTTGCATTTTTTACCTGCTAAAACGGT	AAATTTTTTCGTTTAGACTTCCATGCAGATCCGCTTAATCTGCAAATCCGCGAGAAAAT
TCCCGCTTAATTATTTGCATTTTATTACCTGCTAAAACGG

Protein	Signature genes	Signature genes Name	Protein_function
CP034158.1\|AZI67799.1\|1937335_1937686_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|365826
CP034158.1\|AZI67806.1\|1946615_1947596_-\|peptidase	unknown	unknown	gnl\|CDD\|238626
CP034158.1\|AZI67808.1\|1949322_1950903_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
CP034158.1\|AZI67812.1\|1957697_1959977_+\|cyanophycin-synthetase	unknown	unknown	gnl\|CDD\|237586
CP034158.1\|AZI67814.1\|1960883_1962035_-\|glutathione-dependent-formaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|176243
CP034158.1\|AZI67801.1\|1938781_1939096_-\|DUF4286-family-protein	unknown	unknown	gnl\|CDD\|379477
CP034158.1\|AZI67813.1\|1960306_1960855_-\|hypothetical-protein	unknown	unknown	unknown
CP034158.1\|AZI67811.1\|1954647_1957299_-\|DNA-ligase-D	unknown	unknown	gnl\|CDD\|235658
CP034158.1\|AZI67797.1\|1935223_1936186_-\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240628
CP034158.1\|AZI67807.1\|1947683_1948847_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349916
CP034158.1\|AZI67810.1\|1952376_1954416_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|367566
CP034158.1\|AZI67802.1\|1939243_1941850_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP034158.1\|AZI67804.1\|1943411_1945184_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238518
CP034158.1\|AZI67798.1\|1936187_1937252_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
CP034158.1\|AZI67805.1\|1945658_1946156_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|238612
CP034158.1\|AZI67800.1\|1937745_1938780_+\|acyl-CoA-reductase	unknown	unknown	gnl\|CDD\|368656
CP034158.1\|AZI67796.1\|1933976_1935221_-\|DUF1015-domain-containing-protein	unknown	unknown	gnl\|CDD\|377633
CP034158.1\|AZI67815.1\|1962674_1962929_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|378935
CP034158.1\|AZI67803.1\|1941875_1943264_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
CP034158.1\|AZI67809.1\|1951189_1952074_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237195

Protein	Function_ID	Function_description	E-value
CP034158.1\|AZI67799.1\|1937335_1937686_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|365826	pfam00037, Fer4, 4Fe-4S binding domain. Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich.	0.0030316
CP034158.1\|AZI67806.1\|1946615_1947596_-\|peptidase	gnl\|CDD\|238626	cd01301, rDP_like, renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.	8.55808e-49
CP034158.1\|AZI67808.1\|1949322_1950903_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	2.74213e-178
CP034158.1\|AZI67812.1\|1957697_1959977_+\|cyanophycin-synthetase	gnl\|CDD\|237586	PRK14016, PRK14016, cyanophycin synthetase; Provisional.	0
CP034158.1\|AZI67814.1\|1960883_1962035_-\|glutathione-dependent-formaldehyde-dehydrogenase	gnl\|CDD\|176243	cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
CP034158.1\|AZI67801.1\|1938781_1939096_-\|DUF4286-family-protein	gnl\|CDD\|379477	pfam14114, DUF4286, Domain of unknown function (DUF4286). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.	8.67592e-10
CP034158.1\|AZI67811.1\|1954647_1957299_-\|DNA-ligase-D	gnl\|CDD\|235658	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed.	0
CP034158.1\|AZI67797.1\|1935223_1936186_-\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240628	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains. Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	8.76099e-134
CP034158.1\|AZI67807.1\|1947683_1948847_-\|amidohydrolase	gnl\|CDD\|349916	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
CP034158.1\|AZI67810.1\|1952376_1954416_-\|dihydrofolate-reductase	gnl\|CDD\|367566	pfam03571, Peptidase_M49, Peptidase family M49.	4.04393e-32
CP034158.1\|AZI67802.1\|1939243_1941850_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP034158.1\|AZI67804.1\|1943411_1945184_+\|aminopeptidase-P-family-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	2.71429e-108
CP034158.1\|AZI67798.1\|1936187_1937252_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
CP034158.1\|AZI67805.1\|1945658_1946156_-\|nucleoside-deaminase	gnl\|CDD\|238612	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on the substrate. The functional enzyme is a homodimer. Cytosine deaminase catalyzes the deamination of cytosine to uracil and ammonia and is a member of the pyrimidine salvage pathway. Cytosine deaminase is found in bacteria and fungi but is not present in mammals; for this reason, the enzyme is currently of interest for antimicrobial drug design and gene therapy applications against tumors. Some members of this family are tRNA-specific adenosine deaminases that generate inosine at the first position of their anticodon (position 34) of specific tRNAs; this modification is thought to enlarge the codon recognition capacity during protein synthesis. Other members of the family are guanine deaminases which deaminate guanine to xanthine as part of the utilization of guanine as a nitrogen source.	6.11012e-34
CP034158.1\|AZI67800.1\|1937745_1938780_+\|acyl-CoA-reductase	gnl\|CDD\|368656	pfam05893, LuxC, Acyl-CoA reductase (LuxC). This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalyzed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components.	4.18889e-10
CP034158.1\|AZI67796.1\|1933976_1935221_-\|DUF1015-domain-containing-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	2.71867e-116
CP034158.1\|AZI67815.1\|1962674_1962929_+\|DNA-binding-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	2.18798e-07
CP034158.1\|AZI67803.1\|1941875_1943264_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.92597e-06
CP034158.1\|AZI67809.1\|1951189_1952074_+\|hypothetical-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	0.00708974

>CP034158.1|AZI67805.1|1945658_1946156_-|nucleoside-deaminase
MKNNIKESDKTYLKRCLELAALSVKAGDEAFGSILVDKNGKIIAEARNKVNEKNVLAHPEIELAQWAAEHLSEEERAATTMFTSGEHCPMCSAAHGLAGLGALVYLSSAKQLGEWKSEYNQPKAKINFLPVQEIIKNVEVRGPGEGELLEEIKALHLQSWEVKWQ
>CP034158.1|AZI67804.1|1943411_1945184_+|aminopeptidase-P-family-protein
MTSAEKIALLRQKMAENNIDAFIVYSADPHMSEYLPAEWQERSWLSGFTGSAGFVVITKDKAGLWTDGRYFVQAPIELEGSGIDLFKDGMDGTPNYIDWIISEIPENGTVAVNALATSNSNWELLQEKLSAKGKNLVDLPLLKEVWKDRNTGAPKNPIFVHPIERAGKSVADKLADIRQKMEEVEASVHIISSLDDVAWTLNLRGSDVQSNPVFLGYIILTKNETKFFVDLEKLDTEAREQMQECWVKVLPYEQFFEELKTYKDEKILISPNSNQAIFEALKDQNTFLKAAVPGNLMKAIKNKTELEGFRTVMQRDGVAMVKFLYWLTHQAGKEEMTEFSIGEKLRGFRAEGKNFVGESFGSIVGYRENGAIMHYSAKSEGSKEVTNQDTILVDSGGQYLEGTTDITRTLALGTASDEFRHNATLALKGLIQLSMVKFPKGTRGVQLDAFARLALWMEGKDYNHGTGHGVGSFMNVHEGPQNIRKDMNMQQLIPGMVLSNEPGFYYDYHYGIRHENLIAVREVETTDFGTFYDFETLTICPFDRNIIATELLTEPEKNWLNEYHQWCREKLENDLEGEVKDWFLDQVKPL
>CP034158.1|AZI67803.1|1941875_1943264_+|hypothetical-protein
MKKIFLSAALLTAVFTFAQKKEIAAAVKAIDAGDIATTTAQLAQAESAMGTKTYFLEPALLEQYYYAKGLSLLKAGKSAEGASYLAKINDLAKNKIYVGKDSSKNKVYYVGKTAADASGIQGLKEETYVPTLMGKLGTSINPVIEAANKAALAAYNEKKYSVAAPKFKEVYELLSAAGQDNKKYLYYSGLTYALGDMKKEATDVYMDLINSNYTGVETTYTAKNKKSGEVENLEKATWELYKKMGAAGDYTDFKTEVSKSVEQELYETTAALLLDSNRGDDALAFIEKGLKKFPASAKLTELQGTAFYKAGKTNEFITNLKAQLAKNPNDANNWYNLGVLQSKDPATVADAVASYKKALEIKPDLVQAHQNLTYLTMGDDAKATEDYNTARKAGKTELANKIIEARRARLAATLPYAEKWYQYDSNNIDVVSLLKGLYLSTKNEAKYKEFKDKEAAMLAAQK
>CP034158.1|AZI67802.1|1939243_1941850_+|DNA-gyrase-subunit-A
MHTEGERLIPINIVDEMKSSYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYGLNVFSNRKHLKSARIVGDVLGKYHPHGDTSVYDAMVRMAQPWSLRYQQVDGQGNFGSVDGDPPAAMRYTEARLRKISDEILADLDKDTVDFQNNFDDSLTEPTVMPTKIPNLLVNGTSGIAVGMATNMAPHNLTESIDAICAYIDNREITIDELMKHIIAPDFPTGGIIYGYDGVRDALHTGRGRIVLRAKVGFEEIGNRNAIIVTEIPYQVNKADMIARTADLVKDEKIPGIYEIRDESDRQGMRVVYELKNDAIPNVVLNTLYKYTALQTSFSVNNIALVKGRPVQLNVKDIIHHFVEHRHEVIVRRTKYDLNKARERAHILEGFMKVIGTQDALDKAISIIRNSSNPADAKEGLMNEFELSEIQAQAILDLRLARLTGMELDKIRAEYDEIMALITDLEDILANEPRRYQIIKDEMLEMKEKYGDERRTEIDYSGGEMSIEDLIPDEKVVLTISHAGYIKRTSLSEYKVQSRGGVGNRAATTRDEDFLEYIVAATNHQYMLFFTEKGKCFWLRVFEIPEGSKTAKGRAVQNLINIEPDDKIKAYIRTNDLKDADYVNQMNVVMITKNGTIKKTSLEAYSRPRTNGVNAIEIREDDQLLGARLTNGHSEIMIATRKGKCIRFPEEKARAVGRGSIGVRGITLDEGDEVIGMIVVEDVEKESVLVVSEKGYGKRTAVEDYRVTNRGGKGVITLNITEKTGDLIAIQMVTDDDGLMIINKSGVAIRMGMDEMRIMGRNTQGVKVINLKKNDEIAAIAKVEMDKEVIVDEAETAHDVESEENGEEGVNLNLNPTSGDEIHPTRDTLDSESETEEE
>CP034158.1|AZI67801.1|1938781_1939096_-|DUF4286-family-protein
MSLLSVTFHSTADIQNQWSDYLTTELHQMVENLLDVEKYILSEVESEMVSEGQNTNLLLMFADVEKRQDFVEIELANITEIIEKKFADQVMVFVTFLNPSKTRY
>CP034158.1|AZI67800.1|1937745_1938780_+|acyl-CoA-reductase
MKLQKQILGLCKLSSYIEDFLDKNAENFSEIDEEFFAVLRKSEIENPWFTLESQKFALKQWAELLNENSLQNWLEKYQPAKNPKKVGLILAGNIPMVGFHDILSVVLSQHFPLIKLSSKDKTLIPFLLKKWNEFSEGNVPFEFVERLQNFDAVIATGSNNTARYLEYYFKDSLNIIRKNRTSIAVLKGDETPEELALLAEDIFRYFGLGCRNVTRLFIPEDFIIDRLFESFVYFKDIINHNKYANNYEYNRAIYLLNQEKFWDNNFVMLKEDADLFSPLSVLNFTRYKNIDEVKEFIAENNQNIQAIAAKKELGLDSIEFGEAQNPSLSTFADHVDTMAFLEVI
>CP034158.1|AZI67799.1|1937335_1937686_-|4Fe-4S-dicluster-domain-containing-protein
MAIKITDECINCGACEPECPNNAIYEGAVDWKASDGTALKGTVVMKSGLTIDADAPQEPVSDDIYFIVTDKCTECIGFHEEPQCAAVCPVDCCIPDEDHVESEESLLQKKAFLHGE
>CP034158.1|AZI67798.1|1936187_1937252_-|3-phosphoserine/phosphohydroxythreonine-transaminase
MSKKHNFSAGPCILPQEVFEKSAAAILDFNGIGLSLLEISHRSKDFVPVMDEARAIVKRLMKLGDDYEVLYLGGGASLQFVMVPFNLMKLENGKAAYLDTGTWAAGAIKEGKKLGTVDIVGSSKEKNYSFIPKDYSVGSEYDYFHCTSNNTIYGTQMKEFPKVDTLMVCDMSSDIFSRVIDFTQFDLIYAGAQKNMGPAGTTLVVVKKEILGKTGRDIPSYLDYSLQIAKESMFNTPPVFPIYASLLTLQHLENNGGIEAAEKRNIDKAALLYAEIDRNPLFETFCEKEDRSLMNVSFKLLDDSKKEEFDAAWKNAGINGLNGHRSLGGYRASMYNALPIESVQVLVDVMKNLN
>CP034158.1|AZI67797.1|1935223_1936186_-|3-phosphoglycerate-dehydrogenase
MKVLANDGISEAGKTALKEGGIELLDAKVSQEQLADFINQNDVDVLLVRSATKVRQDLIDACPGLKIIGRGGVGMDNIDVEYAIDKGLYVINTPKASSRSVAEMVFAHFFSLARFLHESNRLMPLEGESNFNALKKSFSNAYELQGKTLGVIGFGGIGQEVLKMGIALGMKVKVLTRNPKTETLTLEFFDGQTANFRISTENDINTFLQGVNFLSINTPASDGYIIDKAQFEKMQDGIYIVNTARGGVINEVELLNFIESGKVAGAALDVFESEPKPELALLMNPNLSLSPHLGGNTVDAQEKIGRELAEQIIEINRNSN
>CP034158.1|AZI67796.1|1933976_1935221_-|DUF1015-domain-containing-protein
MPIFKPFRGIRPSEDYVDIFPTHPLDNFSQEEINKKAQQESSYIQMVKPFVVSKSKDVDRNLRKIRTNFEEMMADRKLIQDNASYYLYEQILPSKCVYRGLLGLVSVEDFRNGNIKKHESTLTHRKESLAYYLDKVNIQAEPVLLTYMANPKVELLMNHEQKNVPILNYVAENGTRHKIWRIDNRLKMLQFKEVLDQIESFYIADGHHRMGSVALNAKNQKAKNKKHNGMELYNYVYSFIVSNQSIKIHDYNRLLKDLNGLDSADFLKKIEKNFQIHEKGENAYFPSQKFHISMYLDGKFYSLHVKHELRKKEGQVADLDHFLLEEFIFKDILGIEDPKTTDKITYLKGNSTIEGIKEMKEKVDSGKYKIGFGIYPVSFNDLLKVSDNNIKMPPKCTYIEPKLVTALLMYDMKQ
>CP034158.1|AZI67806.1|1946615_1947596_-|peptidase
MKYPVIDLHCDLLSYLAQPNSDVNSTADLGCSIPYLKKGNVKLQVMAIFAATEAKSVEFGVKQSKIFRELMEENSDFYSFEKQHLEPFSRNEKIGILAAVENGSAFCEENMTLKDGFRNLEKIIENAGRILYIGFTHHTENRFGGGNFATAGLKNDGKALLDYLHGRNIAVDFSHASDALAYDILNYISKENLKIPILASHSNYREVFAHNRNLPDELAKEIIHQKGLIGLNFIRAFVHPEKAKAVEEHVAHGLHLGAENAICYGADYFYTKSHPDQSRQPFYHKEHENAGEYQRLNDNFEGIFGKEQAEKISYKNAVEFLKRNWI
>CP034158.1|AZI67807.1|1947683_1948847_-|amidohydrolase
MNTDVLEKIKSDKETLTSWMDHMHQHPELAMTEVNTSQFIAEKLREIGSWEIAEGIGKTGIVASMTVGDGKRAIGLRADFDALPIQEDNDLPYKSTVPGKAHLCGHDGHTTMLLGAAKYLAETKNFNGTVHLIFQPGEETMQGGPAMIEDGLFDKFPVDAVFGMHNMPGLELGKLYYNTGKFMAAVDNWEIEITGKASHGSMPELGIDPIVCGSALVMALQTIVARNLSPWHNSVVNVGSFQSGIAGNAVPQSAVLRLSIRNMDPDDRKMVLDKVRLITKAQAEAFNCKVEIREGIPGTVLVNSEEETYWAAKVAKETFGENQVITDAHPYMGSEDFAFMLEKKKGNYCMIGNGDTYMIHHPKFIFNQDLLPLGARYWVALVENYLK
>CP034158.1|AZI67808.1|1949322_1950903_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MNQDTICAIATANGVGALGIIRLSGAEAVSIAQRCFKGANLQEAASHTVHYGYIFERREARDEKLEIRGGSRELRIKSQEPRIKIQGESVKGSEAEGQIEGEKVVNSPLSTVNQEEAVNPEELIDEVMVSVFRAPKTFTTEDVVEISYHGSPHIAKKILEVLVKNGARLAKAGEFTMRAFMNGRIDLAQAESIADLIASENEASRKVALNQLKGGITNEISVLRNDLLNFTSLIELELDFAEEDVEFADRSAMNSLLQNLRTKLSALIESFQYGNALKNGVEVAIIGKPNAGKSTLLNALLKEERAIVSEIAGTTRDTIEEVIHLKGTAFRFVDTAGLRETTDVIEKIGVTKAKEKIASAKVLLYLYDEQDSTTEEVIAFVKEFHREDLKIVLIHNKVDLTNDEIPNEFERILAEELFPDYCDQILRISAKEKTGIEAVKNVLTDYVENLKNQESNVIITNQRHYDALEKSLQSVLQVEEAVSSGIHTELLAYELRNALEHLGEISGEFTNDEVLGNIFSKFCIGK
>CP034158.1|AZI67809.1|1951189_1952074_+|hypothetical-protein
MSIYEHLPPGSFPKTLFIKAQTSFSEIENSIENQFTYPFIVKPDIGRMGFMFRIIHNREQLLAYHGAMHVDYLVQEKVNYPIEVSVFYYRFPNESRGTITGFVRKEYLQISGDGKSTVEQLMLANDRVSGRIEEMKIRHQDRLKMVLRNNENLCLSYALNLSKGCRLISLEHEKDDALRQVFDSLSSYSGTLFYGRYDIKCASVEDLKAGKNFSIIEYNGCGAEPHHVYGSGNSLLKACTILAEHWQILSKISRHNHRMGVKYDSFLVGWKTMRNCRKHFAKLKKLDANFPEFY
>CP034158.1|AZI67810.1|1952376_1954416_-|dihydrofolate-reductase
MKRTKITLLALASMLLFSCTVQPSSTTPPAAQEQTATSDQNSIDRFADIEVLKYQVPGWDNLTLKEKEYVYYLSQAGYAGRDITYDQNYKYNLTIRRALENIYQNYSGNKNTEDWQNFETYLKRVWFANGIHHHYSNEKMKPAFSKSYFEQLLHATNTKLDANVADILFNNIDSKKVNLDLSKGLLQGSAVNFYGDGITAEEADAFYKSMKSPDPQRPLSTGLNSKLVKENGKIVEKVWKSGGMYGSAIDQIIFWLEKAKAVAENQKQANALALLIQYYKTGSLKTWDDYNTAWVEATDGNIDYINGFIEVYNDPLGHKGSYESVVQIKDFDMSRKMEVLSKEAQWFEDHTPLMPQHKKKNVVGVSYKTVTVAAEAGDSSPSTPIGINLPNADWIRAEHGSKSVSLGNIIDAYNAAGGTSRLKEFVNDEEELALAQKYGELSSKLHTALHEVIGHASGQINPGVGTPKETLKSYASTMEEGRADLVGLYFLYDPKLQELGLVDDWKSVGKAAYDNYIRNGLMGQLVRLEPGADIEESHMRNRQWVSAWVFEKGKKDNVIEKVVRDGKTYFNITNYERLHELFGELLRETQRIKSEGDYNAAKNLVENYGVKVDQNLHKEVLARNAQYKEAAYKGFVNPYITPVKNSSGQVTDYVLTYPKTFAEQMLRYAKEYSFLPNNN
>CP034158.1|AZI67811.1|1954647_1957299_-|DNA-ligase-D
MALEKYREKRDESKTPEPFGGKTSGKELVFVIQKHDASHLHYDFRLEMDGVLKSWAVPKGPSLDPDVKRLAMMVEDHPYDYRKFEGLIPKGQYGGGTVIVWDEGTYEPIDEVEGDKKKQEKSLLEQLKSGKIKFRMHGEKLKGDFALIKAYGRSENGWLLMKLEDEFASTDDITKKDKSVISKKSIAEMEKSPDRIYGEEKAAKAEDEAKDKKMPKKSRKKPADVAALLESAPKEKFYQEVEPMLATLVDEPFDSEDWLYEVKWDGYRAVAFLNEGSVEMKSRNDKSFNEKFYPVFDELKKLKINAVLDGEIVVLNSEGKADFGGLQNWRSESDGDLVFYIFDILWLDGKDLKDFVFTDRRKILSSVLPENKTILLSEAFDTSGIEFLETARKMGLEGIMAKRKDGRYHTKNRTKDWLKIKANKRQEVVIGGFTVNEGTSKKFSSLLLGVYEGKKLIYTGKVGTGFNAKMQTEMMELFKPLITDKVPFSEEPDVNKPSRFRPDPPHATVTWLKPELLCEVSYAEITSDGIMRHPSFKGMRSDKDAKKAVLEVEKHTEDIVKELETPIKKRGKAARKTLLNPKDKSQVKKINGHELKFSNLDKIFWPKEKITKRDLINYYYQVAPYILPYLKERPQSMNRFPDGIEGEQFYYKDVTGRAPDWVETYLYHSEKDHRDRKYLVGKDEATLLYMANLGCIEMNPWNSTIKKPDNPTFCIIDLDPDQNSFDQVVETALLTRDILADMGVPCYCKTSGSTGLHIYIPLGNKYTYEQSKEFARAIVTLVNRELPEITSIERIIKEREGKMYLDFLQNRPHATIACVYSVRPKPGATVSMPLHWDEVKKGLKISDFTIFNALERLEQEGDIFKPVLGKGIDLLKVLERFEG
>CP034158.1|AZI67812.1|1957697_1959977_+|cyanophycin-synthetase
MNSTNLNSRHGSSAEGSENSKIYSSNTENQNSIPYAVGTMQQKLHNTENLGPSTLSIIAEAEKRGIPWRRLNDSSKILLGHGKNQQIIRATMTGKSSCIAVETVDNKYQTKNILDDAGIPVPRGSICTSIEDLEEICEELGFPLVIKPAGANHGRGVSVNIQDLFSARQAFDEAKDFRSAVMVEKHIEGKDFRLLVIGGKLVAAAHRQPAQVKGDGRSTIKELIEKVNADPRRGEGHLKVLTKISLDADTEKLLNQKSYTLEGVPAENETVVLKSTANLSTGGTATDVTDKVHPENRFLAERAAAILDLDICGIDIISPDIGVPLAENRGAVIEVNAAPGFRMHLAPSEGQPRNVAAAVIDMLFPAEKPITIPIFAITGTNGKTTVTRLLAHLAQSCGYSPGFTTTDGISVAGHEIVKGDCSGPSSAALVLADPLVDFAILETARGGLLRAGLAFEKCDVGILTNIAADHLGLKNINTLEELAEVKAAVVRSVKSSGWAVLNAEDHRCVTIAETLNCNVAFFSLDPAAETARAHVAKGGLIATVKEGNLVVYKDHEKTMISGIMDIPLTLNGTSRCMTANILAATAAAFAYGFTQEQIKTAWQSFKPGLEQTPGRMNYFKIRDFSVLVDYAHNPHGMCEMQDYLSHIHAPRKVGIVAGVGDRRDSDIIELAEIAANMFDRIIVRQEHSLRGRELDEMNNLMIQGMEKSGRKVPYEMIPDEKEAIRYALETAQTGDYIVALSDNYQEVIKIIKEFAPEIA
>CP034158.1|AZI67813.1|1960306_1960855_-|hypothetical-protein
MITDETKPSDFKKSIPADHSHIKGWGIDADPENDPTYPIKKRTNEEHEGYSWDRPAQQPETVEILKSVERPNVTAVFGTASPPKGLSGEIRRLAYKYSESSYGRWLPLVLADRVGVVEGILDDFKRGTVPNVFGERGWGAEWKYNRTNFLLKIGATAAVAAAAIAVLASKKSDGKEANNYSI
>CP034158.1|AZI67814.1|1960883_1962035_-|glutathione-dependent-formaldehyde-dehydrogenase
MLAMNFRGPYRVRTDKNAPEPEILHPEDAIVKVLRSCICGSDLHLYHGLVPDTRVDSIFGHEFIGEVVEIGSGVQKLKVGDKIMVPFNIACGKCAFCRQELYGNCHEANPMATAVGGIFGYSHTAGGYNGGQAEYARVPYADVGPTLIPDWMDPDDAVLLTDVVPTGYQAAEMAGIQKGDTVVIFGAGPIGIMAAKSAWLFGAGRVIVIDHLEYRLEFVAKYAQCEAYNFNSIGDPVVFIKTETDSLGADVCIDAVGCEAKGNTMNTLLGVKLLLQGGSTTALHWAINSVKKGGIVSIVGVYGPIDALVPLGNIVNKGITIRANQAAVKRHLPKLIEHVKNGIIDPKQIITHRVPLEEVADAYHMFSQKLDGCIKTVLIPPTA
>CP034158.1|AZI67815.1|1962674_1962929_+|DNA-binding-protein
MNERKRNKKRPSYRTPPFSGGKKRQTSPPIYDNADMMQLFHVSGRTLQRWRKEGIVPYKKIGGKIFYLAEDVLKMMRKGGDAKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_LN879503	Candidatus Protochlamydia naegleriophila strain KNic plasmid pPNK, complete sequence	74492-74522	8	0.742
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NC_018066	Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence	58477-58507	9	0.71
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_CP015251	Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence	96204-96234	9	0.71
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_CP033130	Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence	278854-278884	10	0.677
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_CP010351	Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence	246848-246878	10	0.677
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_CP032285	Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence	260926-260956	10	0.677
CP034158_1	1.1\|81870\|31\|CP034158\|CRISPRCasFinder	81870-81900	31	NZ_CP043309	Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence	314767-314797	10	0.677

1. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_LN879503 (Candidatus Protochlamydia naegleriophila strain KNic plasmid pPNK, complete sequence) position: , mismatch: 8, identity: 0.742

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
tccctgaatatttaagaaaatgccgttattt	Protospacer
..* ***********.*********.**

2. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NC_018066 (Desulfosporosinus acidiphilus SJ4 plasmid pDESACI.01, complete sequence) position: , mismatch: 9, identity: 0.71

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
gaaatggatatttaaaaaaatgcagcaatgt	Protospacer
   ***.**************** ** * .

3. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_CP015251 (Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence) position: , mismatch: 9, identity: 0.71

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
aacatgaatattcaaaaaaataccgggtgaa	Protospacer
  **********.********.***   .*.

4. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_CP033130 (Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence) position: , mismatch: 10, identity: 0.677

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
tgcatgaagatttaaaacaatgccgtatctt	Protospacer
. ****** ******** *******.

5. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_CP010351 (Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence) position: , mismatch: 10, identity: 0.677

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
tgcatgaagatttaaaacaatgccgtatctt	Protospacer
. ****** ******** *******.

6. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_CP032285 (Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence) position: , mismatch: 10, identity: 0.677

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
tgcatgaagatttaaaacaatgccgtatctt	Protospacer
. ****** ******** *******.

7. spacer 1.1|81870|31|CP034158|CRISPRCasFinder matches to NZ_CP043309 (Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence) position: , mismatch: 10, identity: 0.677

ctcatgaatatttaaaaaaatgccgctaaag	CRISPR spacer
tgcatgaagatttaaaacaatgccgtatctt	Protospacer
. ****** ******** *******.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage