CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034173	Chryseobacterium taklimakanense strain F9257 chromosome, complete genome	0 crisprs	DEDDh,cas3,RT,csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1117449 : 1159132

Staphylococcus_prophage(22.22%)

transposase,integrase

attL 1116941:1116960|attR 1155811:1155830

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1116941:1116960	attL	NA	NA	NA	NA
AZI22505.1\|1117449_1118706_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.6e-35	33.6
AZI22506.1\|1118944_1119211_+\|transposase	transposase	NA	NA	NA	NA
AZI22507.1\|1119348_1119594_+	DNA-binding protein	NA	NA	NA	NA
AZI22508.1\|1119612_1120122_+	hypothetical protein	NA	NA	NA	NA
AZI23723.1\|1121385_1122675_-	HTH domain-containing protein	NA	NA	NA	NA
AZI22509.1\|1122837_1123935_+	hypothetical protein	NA	NA	NA	NA
AZI22510.1\|1123941_1125477_+	hypothetical protein	NA	NA	NA	NA
AZI22511.1\|1125448_1127209_+	hypothetical protein	NA	NA	NA	NA
AZI22512.1\|1127196_1128294_+	DNA methyltransferase	A0A2I4R668	Erysipelothrix_phage	2.5e-34	30.2
AZI22513.1\|1128332_1128599_+\|transposase	transposase	NA	NA	NA	NA
AZI22514.1\|1128625_1128844_+	hypothetical protein	NA	NA	NA	NA
AZI22515.1\|1128783_1129491_+\|transposase	transposase	S5WIU1	Leptospira_phage	2.4e-38	41.2
AZI23724.1\|1129710_1129953_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZI22516.1\|1130540_1131878_+	hypothetical protein	NA	NA	NA	NA
AZI22517.1\|1131881_1135073_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA
AZI22518.1\|1135075_1136425_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
AZI22519.1\|1136558_1136870_-	hypothetical protein	NA	NA	NA	NA
AZI22520.1\|1136997_1138302_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZI22521.1\|1138302_1140495_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.9e-41	30.1
AZI22522.1\|1140509_1141325_-	GLPGLI family protein	NA	NA	NA	NA
AZI22523.1\|1141454_1143002_-\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	2.3e-54	30.7
AZI22524.1\|1143124_1143700_+	recombinase family protein	A0A219Y912	Aeromonas_phage	2.4e-28	39.6
AZI22525.1\|1143686_1144325_-	hypothetical protein	NA	NA	NA	NA
AZI22526.1\|1144321_1145266_-	hypothetical protein	NA	NA	NA	NA
AZI22527.1\|1145273_1146281_-	hypothetical protein	A0A1B2LRS3	Wolbachia_phage	1.0e-18	29.7
AZI22528.1\|1146291_1146564_-	hypothetical protein	NA	NA	NA	NA
AZI22529.1\|1146704_1147040_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZI22530.1\|1147047_1147617_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AZI22531.1\|1147690_1148410_+	hypothetical protein	NA	NA	NA	NA
AZI22532.1\|1148406_1149378_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
AZI22533.1\|1149398_1150289_+	hypothetical protein	X2KQX9	Campylobacter_phage	9.7e-05	31.0
AZI22534.1\|1150307_1152233_+	hypothetical protein	NA	NA	NA	NA
AZI22535.1\|1152225_1153542_+	biotin carboxylase	NA	NA	NA	NA
AZI22536.1\|1153538_1155677_+	DEAD/DEAH box helicase	NA	NA	NA	NA
AZI22537.1\|1157584_1159132_-\|transposase	IS1182 family transposase	Q9MBP7	Staphylococcus_prophage	1.4e-59	33.8
1155811:1155830	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage