CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP019309	Erysipelotrichaceae bacterium SG0102 DNA, complete genome	3 crisprs	RT,WYL,DEDDh,cas14k,csa3,c2c9_V-U4,cas14j,cas3,PrimPol,csn2,cas2,cas1,cas9	1	49	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: AP019309_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019309_1

111968-112884

Orphan

Consensus_repeat	Method
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	PILER-CR
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CRT

13 spacers

The CRISPR arrays of AP019309_1

>merge|AP019309|1|111968-112884|PILER-CR,CRISPRCasFinder,CRT
GTCGCATTCCTAATGGAATGCGTGGATTGAAATCTCCTTTTTTATCATAATATAAGCGCCTGTGAAGGCGTCGCATTCCTAATGGAATGCGTGGATTGAAATTAACAAGACCACGAAAAGCGAGATCATCGCATCTATGTCGCATTCCTAATGGAATGCGTGGATTGAAATACCTACAATTTATATTTAATTGAAAGCTGTTTTGCGTCGCATTCCTAATGGAATGCGTGGATTGAAATAAGAAATACAGTTTTTTATACTTTTAAGGAAATATTGTCGCATTCCTAATGGAATGCGTGGATTGAAATGCCATAATGTTTTGTAATCCCATTAAGCTTTACGCGTCGCATTCCTAATGGAATGCGTGGATTGAAATCCGGCATTAAGTGCGTACCGCTCACATGTGGAGAGTCGCATTCCTAATGGAATGCGTGGATTGAAATACTTTACCGGATATCGTGTCTTGCAAAGCTCATAGTCGCATTCCTAATGGAATGCGTGGATTGAAATGCGTCTGCCTTTAGTATTTGCAATGTCTTCTTTGGTCGCATTCCTAATGGAATGCGTGGATTGAAATCTGGATTTTTGATTTATGATCTCGAGCACGTGCTGTCGCATTCCTAATGGAATGCGTGGATTGAAATAGCGTGTCCGTTTTCGTTTTTGGCCATGTTCCAAGTCGCATTCCTAATGGAATGCGTGGATTGAAATTCCCACATCTTAGCGAGATCAGCAAAGGCTTTGGGTCGCATTCCTAATGGAATGCGTGGATTGAAATCAAATAGTGAGGCATGCGTAAATGCTCAGCATATTGGGTCGCATTCCTAATGGAATGCGTGGATTGAAATCAGGTGGTAAAAAAGGTAGAAAGTATTCTACATATCGTCGCATTCCTAATGGAATGCATGGATTAAAAT

>AP019309|1|1|111968-112884|PILER-CR
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTCCTTTTTTATCATAATATAAGCGCCTGTGAAGGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TAACAAGACCACGAAAAGCGAGATCATCGCATCTAT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACCTACAATTTATATTTAATTGAAAGCTGTTTTGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AAGAAATACAGTTTTTTATACTTTTAAGGAAATATT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCCATAATGTTTTGTAATCCCATTAAGCTTTACGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CCGGCATTAAGTGCGTACCGCTCACATGTGGAGA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACTTTACCGGATATCGTGTCTTGCAAAGCTCATA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCGTCTGCCTTTAGTATTTGCAATGTCTTCTTTG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTGGATTTTTGATTTATGATCTCGAGCACGTGCT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AGCGTGTCCGTTTTCGTTTTTGGCCATGTTCCAA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TCCCACATCTTAGCGAGATCAGCAAAGGCTTTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAAATAGTGAGGCATGCGTAAATGCTCAGCATATTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAGGTGGTAAAAAAGGTAGAAAGTATTCTACATATC
GTCGCATTCCTAATGGAATGCATGGATTAAAAT

>AP019309|1|1|111968-112884|CRISPRCasFinder
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTCCTTTTTTATCATAATATAAGCGCCTGTGAAGGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TAACAAGACCACGAAAAGCGAGATCATCGCATCTAT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACCTACAATTTATATTTAATTGAAAGCTGTTTTGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AAGAAATACAGTTTTTTATACTTTTAAGGAAATATT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCCATAATGTTTTGTAATCCCATTAAGCTTTACGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CCGGCATTAAGTGCGTACCGCTCACATGTGGAGA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACTTTACCGGATATCGTGTCTTGCAAAGCTCATA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCGTCTGCCTTTAGTATTTGCAATGTCTTCTTTG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTGGATTTTTGATTTATGATCTCGAGCACGTGCT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AGCGTGTCCGTTTTCGTTTTTGGCCATGTTCCAA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TCCCACATCTTAGCGAGATCAGCAAAGGCTTTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAAATAGTGAGGCATGCGTAAATGCTCAGCATATTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAGGTGGTAAAAAAGGTAGAAAGTATTCTACATATC
GTCGCATTCCTAATGGAATGCATGGATTAAAAT

>AP019309|1|1|111968-112884|CRT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTCCTTTTTTATCATAATATAAGCGCCTGTGAAGGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TAACAAGACCACGAAAAGCGAGATCATCGCATCTAT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACCTACAATTTATATTTAATTGAAAGCTGTTTTGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AAGAAATACAGTTTTTTATACTTTTAAGGAAATATT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCCATAATGTTTTGTAATCCCATTAAGCTTTACGC
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CCGGCATTAAGTGCGTACCGCTCACATGTGGAGA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	ACTTTACCGGATATCGTGTCTTGCAAAGCTCATA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	GCGTCTGCCTTTAGTATTTGCAATGTCTTCTTTG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CTGGATTTTTGATTTATGATCTCGAGCACGTGCT
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	AGCGTGTCCGTTTTCGTTTTTGGCCATGTTCCAA
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	TCCCACATCTTAGCGAGATCAGCAAAGGCTTTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAAATAGTGAGGCATGCGTAAATGCTCAGCATATTGG
GTCGCATTCCTAATGGAATGCGTGGATTGAAAT	CAGGTGGTAAAAAAGGTAGAAAGTATTCTACATATC
GTCGCATTCCTAATGGAATGCATGGATTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
AP019309.1\|BBH25169.1\|108485_109250_+\|membrane-protein	unknown	unknown	gnl\|CDD\|377697
AP019309.1\|BBH25168.1\|108037_108328_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|335768
AP019309.1\|BBH25182.1\|122715_123351_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25178.1\|117281_119165_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
AP019309.1\|BBH25183.1\|123517_124264_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
AP019309.1\|BBH25173.1\|110487_111354_+\|transposase	unknown	unknown	gnl\|CDD\|226202
AP019309.1\|BBH25181.1\|121901_122714_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
AP019309.1\|BBH25171.1\|109363_109693_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378960
AP019309.1\|BBH25164.1\|103502_104381_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
AP019309.1\|BBH25177.1\|116809_117235_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25172.1\|109682_110198_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380330
AP019309.1\|BBH25170.1\|109251_109434_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25167.1\|107088_107748_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225382
AP019309.1\|BBH25180.1\|120364_121909_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|374637
AP019309.1\|BBH25165.1\|104644_105043_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381088
AP019309.1\|BBH25175.1\|114447_114591_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25176.1\|115445_116627_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
AP019309.1\|BBH25174.1\|113284_113569_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25166.1\|106164_106374_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH25179.1\|119492_120068_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372298

Protein	Function_ID	Function_description	E-value
AP019309.1\|BBH25169.1\|108485_109250_+\|membrane-protein	gnl\|CDD\|377697	pfam06738, ThrE, Putative threonine/serine exporter. ThrE is a family of bacterial and Archaeal proteins that catalyze the export of L-threonine from the cell. UniProtKB:Q79VD1 has been characterized as being necessary for this export. The domain exhibits 10 putative TMs and catalyzes the proton-motive-force-dependent efflux of threonine and serine.	7.22842e-55
AP019309.1\|BBH25168.1\|108037_108328_+\|hypothetical-protein	gnl\|CDD\|335768	pfam04397, LytTR, LytTr DNA-binding domain. This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.	3.66269e-20
AP019309.1\|BBH25178.1\|117281_119165_-\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.30073e-29
AP019309.1\|BBH25183.1\|123517_124264_+\|transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.02731e-39
AP019309.1\|BBH25171.1\|109363_109693_+\|hypothetical-protein	gnl\|CDD\|378960	pfam12821, ThrE_2, Threonine/Serine exporter, ThrE. ThrE_2 is a family of membrane proteins involved in the export of threonine and serine. L-threonine, L-serine are both substrates for the exporter. The exporter exhibits nine-ten predicted transmembrane-spanning helices with long charged C and N termini and an amphipathic helix present within the N-terminus. L-Threonine can be made by the amino acid-producing bacterium Corynebacterium glutamicum, but the potential for amino acid formation can be considerably improved by reducing its intracellular degradation into glycine and increasing its export by this exporter. Members of the family are found in Bacteria, Archaea, and the fungal kingdoms, and the family can exist either as a single long polypeptide chain or as two short polypeptides. All family members show an extended hydrophilic N-terminal domain with weak sequence similarity to portions of hydrolases (proteases, peptidases, and glycosidases); this suggests that since this region is cytoplasmic to the membrane it may be generating the transport substrate, so may imply that threonine may not be the primary substrate and the ThrE has a subsidiary function.	4.53187e-18
AP019309.1\|BBH25181.1\|121901_122714_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	3.54518e-62
AP019309.1\|BBH25164.1\|103502_104381_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.33316e-47
AP019309.1\|BBH25176.1\|115445_116627_-\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.22151e-30
AP019309.1\|BBH25179.1\|119492_120068_-\|hypothetical-protein	gnl\|CDD\|372298	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	0.000242714
AP019309.1\|BBH25172.1\|109682_110198_+\|nitroreductase	gnl\|CDD\|380330	cd20609, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.	2.86822e-71
AP019309.1\|BBH25167.1\|107088_107748_+\|hypothetical-protein	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.00371e-11
AP019309.1\|BBH25180.1\|120364_121909_+\|fimbrial-protein	gnl\|CDD\|374637	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain. GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilized by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.	7.6102e-16
AP019309.1\|BBH25165.1\|104644_105043_+\|hypothetical-protein	gnl\|CDD\|381088	cd17533, REC_LytTR_AgrA-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AgrA. Members of the LytTR/AlgR family of response regulators contain a REC domain and a unique LytTR DNA-binding output domain that lacks the helix-turn-helix motif and consists mostly of beta-strands. Transcriptional regulators with the LytTR-type output domains are involved in biosynthesis of extracellular polysaccharides, fimbriation, expression of exoproteins, including toxins, and quorum sensing. Included in this AgrA-like group of LytTR/AlgR family response regulators are Staphylococcus aureus accessory gene regulator protein A (AgrA) and Streptococcus pneumoniae response regulator ComE, which are members of two-component regulatory systems. AgrA is a global regulator that controls the synthesis of virulence factors and other exoproteins. ComE is part of the ComD-ComE system that is part of a quorum-sensing signaling pathway that controls the development of competence, a physiological state required for genetic transformation. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.85096e-10
AP019309.1\|BBH25173.1\|110487_111354_+\|transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.2953e-08

>AP019309.1|BBH25173.1|110487_111354_+|transposase
MLDLNVIKKIIENLYLDGAYILLDELEAKEKSTLSNDIMLHKEAFGKPSCPFCHSNNVIRNGKRLGKQTFYCKNCEKYFTYSTNTAVDSSKSVYKTWISFIHYTIKGMTLVNIADEIHVSQTTAFNMRHKLFKAIAHIRDSTILSGQIQIDGKFVPMNFKGTKPENMPRLSKKRSSRSKTPLARKVCIMTAIDSDDHISMEITGLGEETNEMMHVFDGRIAPGSLLVTDGKFAFETYAKNNNLNIEIVKSSKFTNEHDFNLSEVNGSHSQLDIFLKRYRGVSTRHLQG
>AP019309.1|BBH25172.1|109682_110198_+|nitroreductase
MEFEKVINERYSSRKFKSQKISKDQIEAILHAAKVAPTAVNKQPFHIWVISSQDSLDKVSQTTKFTFGAPVIFVLGSKSDQAWVRKYDNQNFSDVDTAIVGTHMMLEIENQGLGTTWVAAFDAPKMKKLFPQMSEYNLIALFPTGYKDVDCKASLMHTKRVNIDEFTTYID
>AP019309.1|BBH25171.1|109363_109693_+|hypothetical-protein
MIFKDFGANTILCNFASAFSLSIIARIFAVFNQAPVTLYLFPGIIPIVPGAGIYYTAYYFFMNNMHQSGRFAQDTAKTVLAICFGIIFAMAIPQKLFKVIKKGEKKNGI
>AP019309.1|BBH25170.1|109251_109434_-|hypothetical-protein
MILNENADAKLHKIVLAPKSLKIKYTIHPKAPVILQYNKCRLGVLYKIAKLTVANIDAIN
>AP019309.1|BBH25169.1|108485_109250_+|membrane-protein
MNTKEILTFTVNVGSLMLSSGAEIYRVKETIVHILNGLAVEEFDVYVVSNGIFASAHENREDACSVIRNITKAEMHSGKISAINQLSRDIYNHDCDFEEAKERFAQIEKIPRTKYKYLLLFCGIGASAFTYMFKGSLYDCLISFINGFILGYFLYKVKGSKFIRNIFGAFIVSGVAMIAAKLFPILNYNAIIIGTLMPLVPGVALTTGVRDLFHGDYLSGAIHMLDAFITGLCIAVGVGTLVSLIAMMKGFGIW
>AP019309.1|BBH25168.1|108037_108328_+|hypothetical-protein
MMQNDIIYIERKDRITYIHTQKEIYEVQEKISDIMERLPRLYFLRCHNSYIVYIPMIKELLKNEIILDNGQIVPVSRNYRKSTQDAFALWAATQMR
>AP019309.1|BBH25167.1|107088_107748_+|hypothetical-protein
MAAQYSINHSVKLYDGAERPDSEQAIDHPVGYILMDTVYNDVSNGPFIQTFKIMPGGVFLAVYHDEKTAEEMVNGLDYIEKLLGPDVFINNIGSILTDRGSEFSLADEFEDRESGTCRIFYCDAMHSNQKGSLENEHLVLRYICPKKKNLRKLGLVSQEALNRAVNNINSYSRKLYGGRSLYENTAFMMPEIYEALKCKGYSQIDKDKVELKPSVLKKK
>AP019309.1|BBH25166.1|106164_106374_+|hypothetical-protein
MSNITKKAAIKNNSREINGTMRPSKGKKRCRKLSEVEEDALMRRLYPYTLIDYCYQTVMQEGDKNGKSR
>AP019309.1|BBH25165.1|104644_105043_+|hypothetical-protein
MMKIVICDDELEYCTKAKVVIERYLKSRNIAGDITYCMTGDELLKQDNVDVIFMDIHLKNENGIDVIKLVNKKWPRTVIVYLTNHIIYASAVYATKHSFFVIKDEFEERLDEIFDKILADLSQPSIDFRNSS
>AP019309.1|BBH25164.1|103502_104381_-|LysR-family-transcriptional-regulator
MDTRLLEYFLAIAREENITKAAESLHITQPTLSRQIQDLEKDLGKTLFNRTGRKTTLTQDGEIFKKRAEEILTLVQKAKDELSSTNTQLHGSIHIGAGETYQMKQITDLLSTIHQEHPSVTYRLYSGVADDVLEKVDTGLLDFALVFEPVQKEKYNFIEVPSYDQMGVLMCDDHPLARKDQITYDDLYQMELLVSTRSEINDTAFVSRLKNDSAMHIIGSFNLIYNASLMVSSHLGQAITIKDIAPRLPHLIWKPITPEINAKLVLIWKKYEVMTPLHQLFLDEIRKLYSQA
>AP019309.1|BBH25174.1|113284_113569_-|hypothetical-protein
MGFTGILSIITVQTESGTRLKLVFAINRNHPDKHIVIASSTTSLSADEIIKIYSKLWQTECFYKIAKEFSLVKEFHCNSMEALVSHTSIIFTAI
>AP019309.1|BBH25175.1|114447_114591_+|hypothetical-protein
MSYLFNKEVVREAKKYYGYFALVTNCEKDHFKCLQAYRKRETIESFF
>AP019309.1|BBH25176.1|115445_116627_-|hypothetical-protein
MIDIVKTFGFVPGRRTFCALFTRMHFNINGQPVGEKKVTRLMQELNLFPNLRHKDAYKGQATYNHPYYNVNDYVKRYFRQDPRKVILTDITYISYNGNKNISYLCVFKDAFTNEILGWHISKRMDVTLVERAYCMMMDLHEKEIEKACKYMKENGKKPYVYIHSDNGSQYLSTEFREILEDDGFIQSVSRRGNSLDNAPMESFFGRMKSILNELVEKCPNFDTVETMIKNFMEQYNTVIPQYDLAGQTPEEYYRYITEGIYQTDVYFGVSAKELITQEELESRREQARAERARRRSKQNESGESSYEYKSEQHPFKVVQKDQKVILARINKLQRLIDENTKEVEKLDTLLADTNTALKFLTKASDSVIKSLYYPRNWQNYPELSYVNRTGAIY
>AP019309.1|BBH25177.1|116809_117235_-|hypothetical-protein
MAKRNKQINLEKALEEASKNQYTEKVTDGRIYYTREFYARMKQLMDGGMSPIKAYKTLGYDVNTLGEDRAYAAAGRAASGQARKPKKVSGMVPRDQVGNLSDQEMVDYLNSRIDYLETVVGVVKKKGSKLLVKVSSSKNEK
>AP019309.1|BBH25178.1|117281_119165_-|hypothetical-protein
MSKGTVISDEAIKILSANKFVKLVRSNRISFTYEFRIMMWERWIKYKSISSIREVMKENGIDYSLFNAQIISRIQRNFKRDGKPTNGRMGNSAKRNKTDKNYDQFLVSTGKFIRARRGISFSKDYTEKLYSLYPDQAIEDVLKSDGFDPERIGYQRIHALKRVFDGDIEPHEKQTFDQNIIEEYTDHPMVERITAHRIKLTDVFYSEASIFSDMHINDILKIFDIDSAILTISTKQRIKKQITQSDHTCSIHLEAGSSDRFKAIALNLYEALYNKMACFLKSISQCIWDLSASLRREAFIMLDSLADSHIMPLSQIISEAGLSRSTFYSILRNDAYGRYEELRNQNEEEEVRAIIDTMNYKGYPKGKRTIHMMMPEITGKSFSIKKIARLMRKHGLNSGVRAPRQSLKAAREHLEKYKCPNLLKRKFRLAMPFTHILTDVSYLFFGANGRGYLSAVKDAVTGRILAAVVSENNDSAMTMETLKQLERYTFRDNAIFHSDQGALYLNEAFQKKVKELGFRESMSRRGICEDNSSQESFFGHFKDECDYTSCSSIEELREMVLSYVEYYNNERPQWTRNKMTPVKYESYLEAMPPEQFDLYMSKETDKYEKTKALATKRAKARANLILS
>AP019309.1|BBH25179.1|119492_120068_-|hypothetical-protein
MYLFFTNTKGMTAFELSDELDINYKTACLFANKCRYLMTLSNARYTLNSLFYEGDVFSIGTRSAGHPGKSSEQQDVQIVLSTKAENQYPEFIKILPIKSETKELCSSNFRKMAYLSKEAVLNSDGTSIFNQFQKEIKIKNDKVIYTEENHRLKYIHIIIGNVKNNIDGIYHGVDKFVLPLYLWEQEWRFNH
>AP019309.1|BBH25180.1|120364_121909_+|fimbrial-protein
MKLKKRLLFVVMSMLLMLANSLTFVQAVGNGRSIKIENPVKGHIYEAYQIFSGDKEDTGDNLSDTLKNVQWGSGVNDVLKEKYNAVEFANLMNKNTDDIDRFITEISRNLTDIHIDSEYNSVNSNYIISKLPTGFYLIVDKKDDNGDDVLGDVFSKNLVEVVSCCAVDIKLKGNAPTVLKKVKENIKKVERDEKLDDGYNDVADYCIGEKVPFELIGTLPSNLSDYKKYKYYFHDELSDAFDYDENSISIQIDNKNINDNARITYNNHKLTVGFDNLKTIDGVKSDSVIKIKYTATLNSNAHIGQLGNENTAKLEYSNNPNADHDESTGYTPNDTVIVYTYELDGQKIDALTNVHLSGAKFKLYRMNGLEREYANLDREKVIGWGKNGDEFESNEDGKFVVSGLDDGKYFLEETQAPTGYKVLNEPVKFIITAKTNNTQNWNEDPITGLESISITIGDNKKSGNVSKGIIKVEVGNISSVMLPSTGSKGTILSLTFGALLIVIGILYKIKKENE
>AP019309.1|BBH25181.1|121901_122714_+|class-C-sortase
MNKKKRDIIFYFFILIGLSFIAYPTFNYITSTIGNSYVIASYNKGVSKINKEDKKSIIFNAKKYNKELYLHKFNLKSYRWKKIYYHQLNLNNSGIMGYIDINDYGIHLPIYHGSNDAVLQIGAGHLEYSSLPIGGRSTHAVISAHTGLPSARMFDQICELKIGSYFQLRILNKTLDYKVDKISIVNPSQISVIKIEKNKDYCSLLTCTPMGINNKRLVIRGHRVNTRIKNNKSLNILKIIPIYIYVIFLICLLFLGVIAYKKLYLFVASH
>AP019309.1|BBH25182.1|122715_123351_+|hypothetical-protein
MFFSDFFDINAEETIRKKKCSITLNINEENGIILLYPIAYYKKNKYTLNGRYKKTLKNKNIDYILQSSQLINKITSKDKKAFRYERIIENKKVKFYGLNRGIYFIRQSKTQDGYYSIKPFIVSIPQKNSDGTKCYDITGNPKVERFNSKESSNYKSKTKDNGNKLKSQKRKNQSVSTKVQVNTEDNTDVLYMEVVFGISLLILWVYIRLKK
>AP019309.1|BBH25183.1|123517_124264_+|transcriptional-regulator
MLDFHAVEVMSETDKQIYKYVVKNVEKVKTMGVRELADETHTSTATIVRFYKGIGAQSFENFKREISILYRGPYLMNKDREIKDIEINIRRFQMAKFDQLIDAFRRLIQAHEYIVFLGVGNSGEIAKYGARFFSNVGYYATAITDPDYPPILRGLSKHLIIVISESGETFSVIKKVKTLKEHNSKIVLLTNFSSSTLTSLADLTINYHCTHVAVPHSFNLTSAIPVIYIIERVGYELYNMDKRILEAI

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Crispr_ID: AP019309_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019309_2

1638647-1638854

Orphan

Consensus_repeat	Method
TTTTTAAAAACACTATCGAGAACAGTA	CRISPRCasFinder

3 spacers

The CRISPR arrays of AP019309_2

>merge|AP019309|2|1638647-1638854|CRISPRCasFinder
TAATTGAAAACACTATCGCGAACAGGACAATTTAATGCGAATAAATCAATGTTTTTTGAGAATTGTGTTAAAACACTACCGCGAACAGCAGTTTTTATAATGCAGAAAAACGATGATTTTGTTAAAACATAATCGCGAACAGCATACATTTTTTAAAAACACTATCGAGAACAGTAGCCAGTTTTTGAAAACATTATCGCGAACAGTA

>AP019309|2|2|1638647-1638854|CRISPRCasFinder
TAATTGAAAACACTATCGCGAACAGGA	CAATTTAATGCGAATAAATCAATGTTTTTTGAGAAT
TGTGTTAAAACACTACCGCGAACAGCA	GTTTTTATAATGCAGAAAAACGATGAT
TTTGTTAAAACATAATCGCGAACAGCA	TACATTTTTTAAAAACACTATCGAGAACAGTAGCCAG
TTTTTGAAAACATTATCGCGAACAGTA

Protein	Signature genes	Signature genes Name	Protein_function
AP019309.1\|BBH26585.1\|1637839_1638031_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH26588.1\|1638961_1640659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377533
AP019309.1\|BBH26589.1\|1640676_1642170_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
AP019309.1\|BBH26582.1\|1634431_1634977_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226078
AP019309.1\|BBH26590.1\|1642252_1642843_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH26581.1\|1633558_1634416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224655
AP019309.1\|BBH26580.1\|1633127_1633556_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
AP019309.1\|BBH26584.1\|1637211_1637640_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226122
AP019309.1\|BBH26591.1\|1642842_1643586_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378037
AP019309.1\|BBH26596.1\|1649186_1650983_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341151
AP019309.1\|BBH26595.1\|1648434_1649133_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379529
AP019309.1\|BBH26593.1\|1645084_1645348_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379262
AP019309.1\|BBH26594.1\|1645363_1648408_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223683
AP019309.1\|BBH26578.1\|1630073_1632188_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH26586.1\|1637957_1638239_+\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH26583.1\|1635090_1637067_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238923
AP019309.1\|BBH26592.1\|1643582_1644560_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH26577.1\|1628844_1629978_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379846
AP019309.1\|BBH26579.1\|1632178_1633042_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
AP019309.1\|BBH26597.1\|1650975_1652592_-\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|211578

Protein	Function_ID	Function_description	E-value
AP019309.1\|BBH26581.1\|1633558_1634416_+\|hypothetical-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.01403e-63
AP019309.1\|BBH26588.1\|1638961_1640659_-\|hypothetical-protein	gnl\|CDD\|377533	pfam05621, TniB, Bacterial TniB protein. This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein which is involved in Tn5053 mercury resistance transposition.	2.08441e-08
AP019309.1\|BBH26589.1\|1640676_1642170_-\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.79911e-07
AP019309.1\|BBH26582.1\|1634431_1634977_+\|membrane-protein	gnl\|CDD\|226078	COG3548, COG3548, Predicted integral membrane protein [Function unknown].	3.8922e-38
AP019309.1\|BBH26580.1\|1633127_1633556_+\|transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.59684e-16
AP019309.1\|BBH26584.1\|1637211_1637640_+\|hypothetical-protein	gnl\|CDD\|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	8.34769e-10
AP019309.1\|BBH26591.1\|1642842_1643586_-\|hypothetical-protein	gnl\|CDD\|378037	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal. The Tn7 transposase is composed of proteins TnsA and TnsB. DNA breakage at the 5' end of the transposon is carried out by TnsA, and breakage and joining at the 3' end is carried out by TnsB. The N terminal domain of TnsA is catalytic.	3.26573e-13
AP019309.1\|BBH26596.1\|1649186_1650983_-\|hypothetical-protein	gnl\|CDD\|341151	cd17262, RMtype1_S_Aco12261I-TRD2-CR2, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) TRD2-CR2 and Moraxella catarrhalis S subunit (S.Mca353ORF290P) TRD2-CR2. Aminobacterium colombiense DSM 12261 S subunit (S.Aco12261I) recognizes 5'... GCANNNNNNTGT ... 3', and Moraxella catarrhalis S subunit (S.Mca353ORF290P) recognizes 5'... CAAGNNNNNNTGT ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	2.86123e-78
AP019309.1\|BBH26595.1\|1648434_1649133_-\|hypothetical-protein	gnl\|CDD\|379529	pfam14267, DUF4357, Domain of unknown function (DUF4357). This domain family is found in bacteria and archaea, and is approximately 60 amino acids in length. There are two completely conserved residues (G and W) that may be functionally important.	7.42039e-10
AP019309.1\|BBH26594.1\|1645363_1648408_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
AP019309.1\|BBH26593.1\|1645084_1645348_-\|hypothetical-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.03846e-05
AP019309.1\|BBH26583.1\|1635090_1637067_+\|hypothetical-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.14052e-76
AP019309.1\|BBH26597.1\|1650975_1652592_-\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	0
AP019309.1\|BBH26577.1\|1628844_1629978_+\|hypothetical-protein	gnl\|CDD\|379846	pfam16472, DUF5050, Domain of unknown function (DUF5050).	0.00625624
AP019309.1\|BBH26579.1\|1632178_1633042_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.1552e-95

>AP019309.1|BBH26586.1|1637957_1638239_+|hypothetical-protein
MTIKKLLNVKKKKAVVQSRPSDKDELIKLSVQRIMSVTKQFKVKDIIETAKNLYDQGSYSIVDNKEFTRDVMKKWKGKKCTTKRSQIKFQMMH
>AP019309.1|BBH26585.1|1637839_1638031_+|hypothetical-protein
MINSGFMDLMNALDSIDASEYDVIRKRELAESERLMRLDIDNQKTAEREKKESSRSKPSIRQR
>AP019309.1|BBH26584.1|1637211_1637640_+|hypothetical-protein
MLKKKKRIDEFDIAKGIAIIAMMIGHLGMKHINMIVYAFHMPLFFILSGYFLSAKDSFIHFIKKKFIGLIIPYYICAGMICLTSVISNRFVNMLHTTFQTHDITTWITAMFMGPARSTYYHMGLFPLAASGFSRLFLSPQYW
>AP019309.1|BBH26583.1|1635090_1637067_+|hypothetical-protein
MHAFITWLNAYPYNNFPDYTQSLLFAGLVVWIFFRQEKTSVKVKNFLLSFLLSFNTANIFAALINSLINSSFPNKGLSSFFVADFALLLTVIPIGELFRNVVGKGKTVFLFIYAQFFVSNCLGMIIAYTVFQRFLITIILSIAILLGFRQEIRYMAQEKTMLSTDRRFIFSTVFFMALMTAEAEMPRIVLDGSKDGAVNSLAIGVSIVGIFLTVMYNVIMKFSFYSISTYETYLREHYNDVITPAKNLSYLSDHAVELVEYYERKGVQAVVFYTDIQNFRDINILHGYEAGSHVLKLIAEKLMAAFPDGIIIRMSSDHFAGIVPLDGAIEHFDQIRKDVEDLSLDETLLLNIGVYQLSHNFTTDPSKYLMRSIDLAATAMRHIPQGSKEHIQMFNEDLEKAEKIRTHVLSSVDQAVTEGWHDVYYQPLIDIKSGKLAEFEALSRWIDPIYGFLTPDQFIVPLEDSRLVYKMDLNVLRSFAKDAQVQLSQGQKVYPISFNISRTDLEASINIYEEIEKIVHDYHLSKDLVHIEITESALNDSSEKMKEALHHFHELGYEVWMDDFGSGYSSLNVLKDYHFDVLKIDMVFLRHFDERSQTIIASICEMASHLGIRTVAEGVETQQQFDFLKKVGCTYAQGYLFSKPLPFDETTIKMQSLM
>AP019309.1|BBH26582.1|1634431_1634977_+|membrane-protein
MEKNRIEAFSDGVLAIIITIMVLELKQPAGDGISDFLKLGHVLLAYIISYFFIAIYWVNHHLIFHQAKRINVKILWCNIAWLFVMSFIPFATAWIGSYPQSWAPLTFYFAVLALACITFHLMYYLIACENGHELFKMGPKNIASLIIYSGAAIIGGTYPLIAYVLVAAISAWWIVPTKKKA
>AP019309.1|BBH26581.1|1633558_1634416_+|hypothetical-protein
MLRQVENKVQGFRTQDGAGVKLVRVLGNGTTDAYDPFLMLDAFDSTDPQDYIKGFPMHPHRGIETFTFLSKGTIVHEDHLGTKATIHDGEAQWLTAGSGAFHSEMPQVSERMLGLQLWLNMPAQSKMAAAPFYHGVVNSEIQEFPFAGGKLRLLAGHYQGHSGIQGQYLPLDYYDILLDPHGSITLEVPGENKSAMIFTLEGEAIVSGTHVNEKTAAKLGNGDQVTIEAGNEPIEIIFMCSERLQEPVAWYGPIVMNSRDELLTAYQELEDGTFIKQNAVYENKE
>AP019309.1|BBH26580.1|1633127_1633556_+|transcriptional-regulator
MKDEMILIALHKIVKDLDHETMQIAGHYGLSFPQFMVLEALMHKDEMCIGDIKDTILSSNGTIPVIIQNLEKQGLLKRRKDLNDRRKSMISLTAQGRQIIEKIVPENTNMYRARFQIWSEEEKRTLIHLLNRYRQLIETGDE
>AP019309.1|BBH26579.1|1632178_1633042_+|ABC-transporter-ATP-binding-protein
MELIIKNLTKKYGSFIALNHVNMTFTPGVYGILGANGAGKSTLMNLITDNLKRSSGEILYNGEDILKQGARYRKKLGYMPQQQGFYEDFTALQFLYYIGELKGLNRAIRHDQAEELLEQVHLYDVRHEKLKSFSGGMRQRVLLAQALLGNPQIIILDEPSAGLDPRERVHIRNMIASLGRQKIVLISTHIVSDVECIADSIILMKQGQVIAQDTPEALIHSITHHVEEFPCTKRSVSALQKKYPEGILVQRSDGLHYRIVTQEPITGGLMIPADHLNLEDVYMYYVK
>AP019309.1|BBH26578.1|1630073_1632188_+|hypothetical-protein
MILLSGVLFFRDNRNDATIKRQTKWEKQEETYQKHYASYIASIINENKALSGISIFTKKNSTAQERSKIARKKYQAMKGITLSDSYGEGLEKVLRFQSVHGLLMIVMIVLTLGFLDHDHQSLALIVASTPKGRSILAMKRMGVLLIVSLGLHMIAYTLLLGEGIVMFGMPQFNVSAQSLSYLKDMTLPISLGAFYLLYIMVSSFCMALLSLVFWDCLIAFHTRSLGLGLFLGLSILEVLLQSHLIAQSPIAFLKYNNIYYLLMPIEIMRSFLTYTCLKQMVNGQHVFVIVMLTIAVLLIIFTVLDHQYHRVLSQSHTYKLKKLIQKVTIRVRSRMSLHKTFFQECYKIVICERGLLYIICFGILLVSLQDTTPYLANDTMNTYQTLYAKYGGAYDGRIMKEYIIPTHKKYQKRKRSYEKISALYDKGKVTLDRLSGEETLLIAAKHEEDIASTIEAQIKDIQKLSQKGIKANLIDQKGWTILLSKDGHYPGEGYYSAEAEGMITIALMCFLLSSLWYYDRKNRMNLIIRTTPQGRDSLYYMRLKIMALLALLAVLSCEGMDFYVLAKTYPLTSWNAPVRSLLFLNDLPVNMPIWCFLIILTLLRMFSLFSLCMLMNCLFMFAGGLKGAFISVGVLVIPQVLSSLGLSFFHYLSAVQLITIMRMGQELGFAFTALILLVLYGSAAIAIYFSKQLWNGKKGKIVWS
>AP019309.1|BBH26577.1|1628844_1629978_+|hypothetical-protein
MFMLLHFDCWGGCSSSQVSNEKKKEENKNTAIANVTTDQIAQKELSYHFDTDAQCDLGDYTDYAYTKNGYYHMKLLNQENDNMTYQLTFTDKKSGKTVPVCTKSNCTHTSADCDANFEEGYDGDHASANKSYYIGYGYFQYYKGSLYLPVKKGDYVYLMKVGADGSTRSNVMKLCRFLQITKKKGDATETASFYPMLQIHRGYVYFTNDETGGKTATLYRKKMGGDQIETIKHLKSHQPMIYRIHPYGNYVFYIAGTMDSKGNMKSNLYAYNTKNKKIFLAGKNISGNYTVYKGSIYYTNGFKTMRIYRLSLGSFQPTYITKTAMKEGESVHLYGNGKKVVVQFVNNDGNLDKQMILENTKKVATYKTPKIKPYQNL
>AP019309.1|BBH26588.1|1638961_1640659_-|hypothetical-protein
MEKGLNGVNFFTRSICENSMFDIHYKTLTEGHNLYEQYSKDEQVVYAEYVASNSDSHNPYIESIPLPRSLKDLETDFTQPVYSYNEEELGGMSLSEKLENIVMLREQFRIMLPFHENLDRAIYQALIKGYRNRRVSFDGSSINKTTNADFNNNSPVKMYKDPLHLESYGSFNVEGYGGTGKSLALSIIMSHYKQVVIHRLKGGGEIYQILYLIVQCPPNGNMSAFYSNIGKAVDTAIGYTYPAFQKRIDQVRSLGEKLNIVINIIERFNIGLIIFDEIQMFLTSKNNNHERVNVKTESFQAITTIMNSTGVSIGVIGTEIAYRLIFEDQIHQNRRLGKTIYADSYCSNHSTFMRILNALIDYQWTDVKITKEDLTPDLLKAFMDCTHGIIDLIIGLYSALQHEALITDRKTKINESFVRKVAKKYYPNLMKTIDNIGASDYDRTRLAEIEEASKLMKKDISKQSDIEHERTISKIKNKPSDKDMLIKSAVAKITAVSDDFKVNSIIDVSKELYETGNYSVTDEKQFTRDVMKVLSGKKIRAKKKPDRMSKDVMMQFLDNNTQDTN
>AP019309.1|BBH26589.1|1640676_1642170_-|hypothetical-protein
MLGKYYTEYIREEDGSTMPALLPASEIPSINQFRYRLNKVITEEEKSLIRAKRKDVSEGNNSLNDSDFLFDIHGPTTVVEMDEQEMDLSAVSYFDPSLAIGRFILHVIIDVQSKLVMAISVSLDNNSVVGATHCLMNLAEDHVEFCKKYGVEIKPEAWPSGNRVNAIRVDRGSEYMSKEFARICQENSINLIPTPARTASRKGTVEKQFSLFGAIWKDILAEYGLISKLHDSNHHEKAVLDYYDIMKICISNVLAYNMSEIENFKRSKEMLSQKILCSPINLWNYYNSKYHTVHPIGNKNAFMYSLMTPTTCYISKNGVRWEELWYQYNDTDIDDLRWKGSHHKMEVRMDRRDVSHLYYIKDNKLRLMTLNPKKTYNMDFKDMPYEIYMKYRKIQKELEAHAREQNIAIDVANRILVKSVLTENKRDTYANIQNMSENRIAVKNLIKSENAMHKALNSEMKTKEKAMIERNQKDRSWPSWDEISDHMSDEEKDFILD
>AP019309.1|BBH26590.1|1642252_1642843_-|hypothetical-protein
MANSMIDKLLSKGLTENEDNKTVPDFKIGDVIAFSNTGVSYRIVSLIDDEVQLVQMNINSINIKAISKDYLNKLLDRSEIQILQHEDLIVDEDKIDFKIREAHDLNMKIAIEMQKYFKNDYIKLKTQAGTHFTQAQMTKYGIGKTKIWRIYRRFLQSGFDTNALYDQRILSHDLSHRVYHSKVGRKPKYSTFGKSD
>AP019309.1|BBH26591.1|1642842_1643586_-|hypothetical-protein
MKQKKRNYFYGRTVSDETKKKEHRGEGTGAEYRPWIRAQEFNSNQGGATVIIDPYNKRDVHLLSVGETMAWYILRYDQSVTDIREQFPLDIEITKKICEKYGIDHPRKNSPKGHQETVMTSDLLVDFKDGSEKVYSVKYDSSYLSNVSISKNLFIEKTYWNQKGIQFIIITREDLEPMQTYVANLRNAFYIADIDQIHDLYSFIQYKITHHMIEVNLMDRLLDLDQLIYKTPALKDEFAAFLKEMKK
>AP019309.1|BBH26592.1|1643582_1644560_-|hypothetical-protein
MSWLNAYTHLEDFLADLMNAECKLSINKINSITMMIGTLASCVPDLKLNTTSLIKSATLYDFYKHFVGEAQLQYYLSLAYSHKNHWETGITANDASLKYCDHCDSGYFKTVNQIPGISCCLECSRPLKSVDLSANGMLIEHHGFTDEPDIELSKLLADIYSSVYTFDFRSIKHLLYNKYCEVLEEYHYKGNGYNQFVDYLRKKGMDRFTSLKYPDAYFTNYMDVPFETAEQITDVISLIRLLFGNYDHFIASSEEFIKTDSKIIAPGSDFGLYGTVIEQNNDLLKVIYPCGASTLKCFGTLNYATCSCSKCRPFKNMYMKRIIRK
>AP019309.1|BBH26593.1|1645084_1645348_-|hypothetical-protein
MEYKLTDIDKRCLGLELGRRRRLAKVKQLDAAEAFGKTRNWLSQIESGTITVSLIDAYHMCEIYQCDLSEVMRIAVETTKDLKKIES
>AP019309.1|BBH26594.1|1645363_1648408_-|DEAD/DEAH-box-helicase
MTAYNVVASSDDSTVVSEYTPEQFESSKYQSEAELEKEFIELLGRQGYSYLPIHSESELIDNLRTQIEKLNDFQFSDNEWDRFFNDVLANTNEGIVEKTRIIQQNNVQVLKRDDGSTKNITIINKKNIHKNYLQVINQYVNNDGLHDNRYDVTILVNGLPLIHIELKRRGIALKEAFNQIDRYQRESFWSSHGLFEYVQIFVISNGTHTKYYSNTTRNSHIAEMKNKKGSKKKTSNSFEFTSYWADANNHIITDLIDFTKTFFARHSILNILTRYCVLTSEDLLLVMRPYQITATERILNRINLATNYHREGTIGAGGYIWHSTGTGKTLTSFKTAILASQLDYIDKVLFVVDRKDLDYQTMREYDRFEKGAANGNTSTKILERQLSDLDEKGNPHEYRIIVTTIQKLSTFVKRNQGHPISNKRIVIIFDECHRSQFGEMHHQITKFFKKYYLFGFTGTPIFAPNANKNNDPAYATTPQLFGDRLHTYTIVNAINDGNVLPFRIDYINTMKMKDESDVNVEAINSESAMLSMKRISQIVSYTLDHYDQKTKRNTFYSYKGKKVSGFNSIFACQSIPAAVRYYSEFRKQIDERNAGLKIATIFSYAANEEQADGILEEENFDTSMLDATGKEVLFIAMSDYDQQFHSNFAVSGDFEAYYKDISMRMKNREIDILIVVNMFLTGFDATTLSTLWCDKNLKMHGLIQAFSRTNRILNSVKTFGNIVCFRNLSQEVEDAISLFGDKDAGSIVLLKDYKSYYDGYEEKDGRHHKGYNELINELLSKYPPDTEPFGEKQEKEFIAIFGSILRVMNILNSFDQFENDKLLTDRQMQDFQSRYLDLYKKYRRKTDKADIEDDVIFEIELVKQIEVNIDYILNLVQKYHNDNCLDDEATANILKAVDSSVQLRSKKELIAAFLARVNLMPSDEDKKVTDEWQSFVKEKYDDEVSQLIADEKLKEDKTRSLLDKSFNQGELKTGGTAIDDCMPPMSRFGGGRAKKKLRIIDKFKTLFEKFSGIM
>AP019309.1|BBH26595.1|1648434_1649133_-|hypothetical-protein
MSKGIIYVMSTIVPGLIKIGKTGTDNFEGRMYSLEHNGYSNVVGLQRQFAIEVEDYDEKEKLLDDIFSKSRVPGTELFALDIDLVIQLLSSFEGNQVYPETETKEQTFDEATAKRHIKEDWALVPDGTYYLKRKIKRNENKAVEASMIVKEGRYIIPKGTVISPTEAERLADNIRSVRHSDAVKDFVTQEDVTFMAPSAASDFVIGGPSNGWVNWKNQDDDPIDIYRRKRTG
>AP019309.1|BBH26596.1|1649186_1650983_-|hypothetical-protein
MNKLGELLKEYCPDGVEYKAIKEVFTRLHGTPITAKKMKEIEDPNGNIKVFAGGKTAINAMEEDIPNANITSVPAVLVQSRGVIDFIYYEKPFTFKNEMWAYTAKEKISIKFLYYVLKNNVKYFRDVAGRMGSFPQISIQVTEKFKVPVPPLPVQEEIVRILDSFTELTAKLTEELTARKKQYEYYLDKMLSINDSQSKLLSDMADVFRGEYITQKGSIAGNVPVVLGGQEPAYYVDKSNHEGEIVAVARSGASAGFVSYWNEPIYITDGFGFEARDGIALPKYLYYVLKRKEHELNAMKRGAGVPHISGEMLSKIKLPSPSIDVQKRIIEVLDNFDAICSDLNIGLPAEIEARQKQYEYYRDALLTFAETGDIIAQTDRQTDRQTDRQTDRQTDRQTDRQTDRQNIIRLVQYVFGYAYVGLEDISENCDNMRKPVTKSNRSSGEYPYYGASGIVDYVSDYIFDGDYLLISEDGANLVARVTPIAFSITGKNWVNNHAHVLKFHNLDEQKYVEMYLNNMDLTPFITGAAQPKLNQKKLNDIKIPMPDKEKTHQIVDILSRFDKICTDISSGIPAEIEARKKQYEYYRDKLLSFKKLDK
>AP019309.1|BBH26597.1|1650975_1652592_-|type-I-restriction-modification-system-subunit-M
MIKYKYVLERKGFIYYMDREQQRLELYKGIWQIANDLRGAVDGWDFKNYVLGMLFYRYISENMTGYINKGEHDAGNTDFDYAEMSDEDAKEAREGLIEEKGFFILPSELFCNVRKNANSNENLNETLDKVFRDIEESSVGTDSERDMKGLFDDIDVNSNKLGGSVAERNKRLVSLLNGIGSMNLGSYEDNSIDAFGDAYEYLMGMYAANAGKSGGEYFTPQEVSRLLTLIGLNGRKQVNKVYDPACGSGSLLLQSAKILGNDNVRLGYYGQEKNVTTYNLCRINMFLHNIGYEKFDIAQGDTLINPQHWDDEPFDLIVSNPPYSTKWAGDSDSVLANDERFNVAGALAPKSKADLAFVMHSLSWLSNEGTAAIVCFPGIMYRGGKEKTIRKYLVERNFVDAVIQMPGNLFFGTSIQTCLLILRKAKENDKTLFIDASSEFVSATNSNKLSEENIQTIYKWYMDKKEVEHKVKFVSIDDIAKEDYNLSVSTYVEPEDTREKIDIVKLNAEIREIVKREEKLRASIDEIIAEIEGGAENE

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Crispr_ID: AP019309_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP019309_4

3160787-3163864

TypeII

Consensus_repeat	Method
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CRISPRCasFinder
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CRT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	PILER-CR

46 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of AP019309_4

>merge|AP019309|4|3160787-3163864|CRISPRCasFinder,CRT,PILER-CR
ATTTTAAAGCAATTTAGAATTAAGCACCTATAAAACTTAGAAAAGTACGAGGTGCGCACTTTTCTAAAGCATTTGAGAACAGTTCAAAATCACATACCTCTAAAGCTCAAATCTAATGCTAATGGTTCCCTTCCTAATTTGGGAGCAGTTCAGAATAACACACCACTAAAACACAAAAAAAGTGAGTCAACCCACATTTTCAGTTTGAGAGCAGTTCAGAATAACACACCACTAAAACAATTCAACTCTGTTTTTACTGCCCATAGTAGTTTGAGAGCAGTTCAGAATAACACACCACTAAAACGATTCGGTTTGATGGATGTTTTCCACGCAAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACAACCCCATAGCGCTGAATGTTATAGTCGATGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTGACTCGTAGAAAAAAGTTACCAATTAATTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTTGTTATGACATGGTTCAGCAGTTGCACCAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCTTTACCGATGCCGTTATAAGGCCTTGCGCGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTGTCATCGTCTGCGATTGTATAGCCGTCTTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGCAACAAGAGAGATCGATACAACAGACTGCGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTCAGCGCTTGCCATAATTTTTAATGTTGTTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGTTGAGGGCACTCTAAGCGCGGACCGAGTAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCATTAGCCCACATCTTCTTAAGAACTACGTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGATCTGCATCAATGTCAAAAGCACCGTGACGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGAATCAGCTCCGACAGCCAAAGTATTTCTTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTTCAGCGGTAAGACTTACCTGGTCAATCAGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTGACTGTTCCGTCATGTTCCAGCATATTCCGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGAGTTTGATCCGCTCAACGTTGAATAACTAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTCAAAAGAGAAAAGATCATTAAATCCCTGAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACACCTAACGCGTCAATGTTGGGCGCTATCGGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACACCATCAAGGGAGCATCAAACATAGAAAACGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTTGATGTTGTATTTTCCGGATCCATATATTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCGCGCGTATCTCAGCATCTTTTGCTGACATGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTGAAGTTATCAATAGATTTACGACTGCGGAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACACATGACGCGTATCTAAGCACATCGCGCTTTGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTATGGCATTGTTCCATTTTTTTTGCACCACGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTTTTTGTCCGGCTGCATTTTGCCGTCTTTTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTCGATCCAGGTGCCGTTTGCGTAGCACTGAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTTTTATAAAGACTTGAGAAGCTGATATTTGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGGGTGACTCATGGAACAATACAGGCTTCCGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGGACATATTCAACAAAAATTCAAAACGCTAGTTTGAGAGCAGTTCAGAATTATACACCACTAAAACTCGGTAAGATGAAAAATGCAAGTGGGCTCGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTAAGATTTTTTCAACTCCTTTGAAATCCTTGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCTAGACAAGAATATCATGTATGCAGATTTAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACAGATCATATCCTTCTAAGATTGCAATCATAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCACCCATAGGCTCATCAATAACCTCGATTGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACAAGAGCGTCTCTGGCCTTAAGTACTTCTCCGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCCGTATGCTGGATTAACTGTCTATGAAGCAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACACGTCATATGATAATCTTATTATGCTTTATGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTGTGATGTTGAAGTTATATGATTTGAGAGAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACCTTCTCCTCTTTCTCTATTTGTAAATGATGGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACTAACCCTGTAACGATATGACCGCCAATAGAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACGCGCTTAAAGCTTTAGAACCCATGTCACTAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACAACGTAAATATAAACAATCGTTGTCATTATGTTTGAGAGCAGTTCAGAATTACACACCACTAAAACACCGAACAGGACACGACAGGAACGACAAAAGTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC

>AP019309|4|4|3160787-3163864|CRISPRCasFinder
ATTTTAAAGCAATTTAGAATTAAGCACCTATAAAAC	TTAGAAAAGTACGAGGTGCGCACTTTTCTAAAGC
ATTTGAGAACAGTTCAAAATCACATACCTCTAAAGC	TCAAATCTAATGCTAATGGTTCCCTTCCTA
ATTTGGGAGCAGTTCAGAATAACACACCACTAAAAC	ACAAAAAAAGTGAGTCAACCCACATTTTCA
GTTTGAGAGCAGTTCAGAATAACACACCACTAAAAC	AATTCAACTCTGTTTTTACTGCCCATAGTA
GTTTGAGAGCAGTTCAGAATAACACACCACTAAAAC	GATTCGGTTTGATGGATGTTTTCCACGCAA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AACCCCATAGCGCTGAATGTTATAGTCGAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGACTCGTAGAAAAAAGTTACCAATTAATT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTGTTATGACATGGTTCAGCAGTTGCACCA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTTTACCGATGCCGTTATAAGGCCTTGCGC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGTCATCGTCTGCGATTGTATAGCCGTCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GCAACAAGAGAGATCGATACAACAGACTGC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCAGCGCTTGCCATAATTTTTAATGTTGTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GTTGAGGGCACTCTAAGCGCGGACCGAGTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CATTAGCCCACATCTTCTTAAGAACTACGT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GATCTGCATCAATGTCAAAAGCACCGTGAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GAATCAGCTCCGACAGCCAAAGTATTTCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTCAGCGGTAAGACTTACCTGGTCAATCAG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGACTGTTCCGTCATGTTCCAGCATATTCC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GAGTTTGATCCGCTCAACGTTGAATAACTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCAAAAGAGAAAAGATCATTAAATCCCTGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCTAACGCGTCAATGTTGGGCGCTATCGG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCATCAAGGGAGCATCAAACATAGAAAAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTGATGTTGTATTTTCCGGATCCATATATT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CGCGCGTATCTCAGCATCTTTTGCTGACAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGAAGTTATCAATAGATTTACGACTGCGGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACATGACGCGTATCTAAGCACATCGCGCTTTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TATGGCATTGTTCCATTTTTTTTGCACCAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTTTTGTCCGGCTGCATTTTGCCGTCTTTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCGATCCAGGTGCCGTTTGCGTAGCACTGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTTTATAAAGACTTGAGAAGCTGATATTTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GGGTGACTCATGGAACAATACAGGCTTCCG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GGACATATTCAACAAAAATTCAAAACGCTA
GTTTGAGAGCAGTTCAGAATTATACACCACTAAAAC	TCGGTAAGATGAAAAATGCAAGTGGGCTCG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TAAGATTTTTTCAACTCCTTTGAAATCCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTAGACAAGAATATCATGTATGCAGATTTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AGATCATATCCTTCTAAGATTGCAATCATA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CACCCATAGGCTCATCAATAACCTCGATTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AAGAGCGTCTCTGGCCTTAAGTACTTCTCC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CCGTATGCTGGATTAACTGTCTATGAAGCA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACGTCATATGATAATCTTATTATGCTTTAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGTGATGTTGAAGTTATATGATTTGAGAGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTTCTCCTCTTTCTCTATTTGTAAATGATG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TAACCCTGTAACGATATGACCGCCAATAGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GCGCTTAAAGCTTTAGAACCCATGTCACTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AACGTAAATATAAACAATCGTTGTCATTAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCGAACAGGACACGACAGGAACGACAAAA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC

>AP019309|4|2|3160857-3163864|CRT
ATTTGAGAACAGTTCAAAATCACATACCTCTAAAGC	TCAAATCTAATGCTAATGGTTCCCTTCCTA
ATTTGGGAGCAGTTCAGAATAACACACCACTAAAAC	ACAAAAAAAGTGAGTCAACCCACATTTTCA
GTTTGAGAGCAGTTCAGAATAACACACCACTAAAAC	AATTCAACTCTGTTTTTACTGCCCATAGTA
GTTTGAGAGCAGTTCAGAATAACACACCACTAAAAC	GATTCGGTTTGATGGATGTTTTCCACGCAA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AACCCCATAGCGCTGAATGTTATAGTCGAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGACTCGTAGAAAAAAGTTACCAATTAATT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTGTTATGACATGGTTCAGCAGTTGCACCA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTTTACCGATGCCGTTATAAGGCCTTGCGC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGTCATCGTCTGCGATTGTATAGCCGTCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GCAACAAGAGAGATCGATACAACAGACTGC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCAGCGCTTGCCATAATTTTTAATGTTGTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GTTGAGGGCACTCTAAGCGCGGACCGAGTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CATTAGCCCACATCTTCTTAAGAACTACGT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GATCTGCATCAATGTCAAAAGCACCGTGAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GAATCAGCTCCGACAGCCAAAGTATTTCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTCAGCGGTAAGACTTACCTGGTCAATCAG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGACTGTTCCGTCATGTTCCAGCATATTCC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GAGTTTGATCCGCTCAACGTTGAATAACTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCAAAAGAGAAAAGATCATTAAATCCCTGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCTAACGCGTCAATGTTGGGCGCTATCGG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCATCAAGGGAGCATCAAACATAGAAAAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTGATGTTGTATTTTCCGGATCCATATATT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CGCGCGTATCTCAGCATCTTTTGCTGACAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGAAGTTATCAATAGATTTACGACTGCGGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACATGACGCGTATCTAAGCACATCGCGCTTTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TATGGCATTGTTCCATTTTTTTTGCACCAC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTTTTGTCCGGCTGCATTTTGCCGTCTTTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TCGATCCAGGTGCCGTTTGCGTAGCACTGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TTTTATAAAGACTTGAGAAGCTGATATTTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GGGTGACTCATGGAACAATACAGGCTTCCG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GGACATATTCAACAAAAATTCAAAACGCTA
GTTTGAGAGCAGTTCAGAATTATACACCACTAAAAC	TCGGTAAGATGAAAAATGCAAGTGGGCTCG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TAAGATTTTTTCAACTCCTTTGAAATCCTT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTAGACAAGAATATCATGTATGCAGATTTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AGATCATATCCTTCTAAGATTGCAATCATA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CACCCATAGGCTCATCAATAACCTCGATTG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AAGAGCGTCTCTGGCCTTAAGTACTTCTCC
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CCGTATGCTGGATTAACTGTCTATGAAGCA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACGTCATATGATAATCTTATTATGCTTTAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TGTGATGTTGAAGTTATATGATTTGAGAGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	CTTCTCCTCTTTCTCTATTTGTAAATGATG
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	TAACCCTGTAACGATATGACCGCCAATAGA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	GCGCTTAAAGCTTTAGAACCCATGTCACTA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	AACGTAAATATAAACAATCGTTGTCATTAT
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC	ACCGAACAGGACACGACAGGAACGACAAAA
GTTTGAGAGCAGTTCAGAATTACACACCACTAAAAC

>AP019309|4|2|3160924-3163864|PILER-CR
TTTGGGAGCAGTTCAGAATAACACACCACTAAAACA	CAAAAAAAGTGAGTCAACCCACATTTTCAG
TTTGAGAGCAGTTCAGAATAACACACCACTAAAACA	ATTCAACTCTGTTTTTACTGCCCATAGTAG
TTTGAGAGCAGTTCAGAATAACACACCACTAAAACG	ATTCGGTTTGATGGATGTTTTCCACGCAAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	ACCCCATAGCGCTGAATGTTATAGTCGATG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	GACTCGTAGAAAAAAGTTACCAATTAATTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	TGTTATGACATGGTTCAGCAGTTGCACCAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	TTTACCGATGCCGTTATAAGGCCTTGCGCG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	GTCATCGTCTGCGATTGTATAGCCGTCTTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	CAACAAGAGAGATCGATACAACAGACTGCG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	CAGCGCTTGCCATAATTTTTAATGTTGTTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	TTGAGGGCACTCTAAGCGCGGACCGAGTAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	ATTAGCCCACATCTTCTTAAGAACTACGTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	ATCTGCATCAATGTCAAAAGCACCGTGACG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	AATCAGCTCCGACAGCCAAAGTATTTCTTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	TCAGCGGTAAGACTTACCTGGTCAATCAGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	GACTGTTCCGTCATGTTCCAGCATATTCCG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	AGTTTGATCCGCTCAACGTTGAATAACTAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	CAAAAGAGAAAAGATCATTAAATCCCTGAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	CCTAACGCGTCAATGTTGGGCGCTATCGGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	CCATCAAGGGAGCATCAAACATAGAAAACG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	TGATGTTGTATTTTCCGGATCCATATATTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	GCGCGTATCTCAGCATCTTTTGCTGACATG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	GAAGTTATCAATAGATTTACGACTGCGGAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	CATGACGCGTATCTAAGCACATCGCGCTTTGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	ATGGCATTGTTCCATTTTTTTTGCACCACG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	TTTTGTCCGGCTGCATTTTGCCGTCTTTTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	CGATCCAGGTGCCGTTTGCGTAGCACTGAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	TTTATAAAGACTTGAGAAGCTGATATTTGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	GGTGACTCATGGAACAATACAGGCTTCCGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	GACATATTCAACAAAAATTCAAAACGCTAG
TTTGAGAGCAGTTCAGAATTATACACCACTAAAACT	CGGTAAGATGAAAAATGCAAGTGGGCTCGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	AAGATTTTTTCAACTCCTTTGAAATCCTTG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	TAGACAAGAATATCATGTATGCAGATTTAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	GATCATATCCTTCTAAGATTGCAATCATAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	ACCCATAGGCTCATCAATAACCTCGATTGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	AGAGCGTCTCTGGCCTTAAGTACTTCTCCG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	CGTATGCTGGATTAACTGTCTATGAAGCAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	CGTCATATGATAATCTTATTATGCTTTATG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	GTGATGTTGAAGTTATATGATTTGAGAGAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACC	TTCTCCTCTTTCTCTATTTGTAAATGATGG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACT	AACCCTGTAACGATATGACCGCCAATAGAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACG	CGCTTAAAGCTTTAGAACCCATGTCACTAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	ACGTAAATATAAACAATCGTTGTCATTATG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAACA	CCGAACAGGACACGACAGGAACGACAAAAG
TTTGAGAGCAGTTCAGAATTACACACCACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP019309.1\|BBH28030.1\|3176283_3177114_-\|NADH-pyrophosphatase	unknown	unknown	gnl\|CDD\|234699
AP019309.1\|BBH28014.1\|3148210_3152095_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238923
AP019309.1\|BBH28025.1\|3170495_3171866_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143454
AP019309.1\|BBH28023.1\|3164999_3165872_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
AP019309.1\|BBH28016.1\|3154439_3155087_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381683
AP019309.1\|BBH28017.1\|3155099_3157814_-\|membrane-protein	unknown	unknown	gnl\|CDD\|224428
AP019309.1\|BBH28024.1\|3165868_3169864_-\|CRISPR-associated-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
AP019309.1\|BBH28012.1\|3145862_3147194_-\|proton/glutamate-symporter	unknown	unknown	gnl\|CDD\|366058
AP019309.1\|BBH28022.1\|3164689_3164896_-\|hypothetical-protein	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
AP019309.1\|BBH28028.1\|3174527_3175094_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239824
AP019309.1\|BBH28026.1\|3172034_3173420_+\|transposase	unknown	unknown	gnl\|CDD\|376573
AP019309.1\|BBH28011.1\|3145087_3145849_-\|RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
AP019309.1\|BBH28019.1\|3158519_3159023_-\|hypothetical-protein	unknown	unknown	unknown
AP019309.1\|BBH28018.1\|3157966_3158548_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
AP019309.1\|BBH28029.1\|3175129_3176092_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
AP019309.1\|BBH28021.1\|3164012_3164693_-\|hypothetical-protein	csn2	cd09644_csn2_CAS-II-A	gnl\|CDD\|213407
AP019309.1\|BBH28013.1\|3147190_3148042_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224016
AP019309.1\|BBH28020.1\|3159164_3160235_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277331
AP019309.1\|BBH28015.1\|3152232_3154170_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237028
AP019309.1\|BBH28027.1\|3173702_3174473_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
AP019309.1\|BBH28030.1\|3176283_3177114_-\|NADH-pyrophosphatase	gnl\|CDD\|234699	PRK00241, nudC, NAD(+) diphosphatase.	3.15026e-59
AP019309.1\|BBH28014.1\|3148210_3152095_-\|hypothetical-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.78406e-78
AP019309.1\|BBH28025.1\|3170495_3171866_+\|aldehyde-dehydrogenase	gnl\|CDD\|143454	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.	0
AP019309.1\|BBH28023.1\|3164999_3165872_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.58388e-104
AP019309.1\|BBH28016.1\|3154439_3155087_-\|uracil-DNA-glycosylase	gnl\|CDD\|381683	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil may arise from mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations; thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other. UDG family 1 is the most efficient uracil-DNA glycosylase (UDG, also known as UNG) and shows a specificity for uracil in DNA. UDG family 2 includes thymine DNA glycosylase which removes uracil and thymine from G:U and G:T mismatches, and mismatch-specific uracil DNA glycosylase (MUG) which in Escherichia coli is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. UDG family 3 includes Human SMUG1 which can remove uracil and its oxidized pyrimidine derivatives from, single-stranded DNA and double-stranded DNA with a preference for single-stranded DNA. Pedobacter heparinus SMUG2, which is UDG family 3 SMUG1-like, displays catalytic activities towards DNA containing uracil or hypoxanthine/xanthine. UDG family 4 includes Thermotoga maritima TTUDGA, a robust UDG which like family 1, acts on double-stranded and single-stranded uracil-containing DNA. UDG family 5 (UDGb) includes Thermus thermophilus HB8 TTUDGB which acts on double-stranded uracil-containing DNA; it is a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA except for the C/I base pair, as well as a xanthine DNA glycosylase which acts on both double-stranded and single-stranded xanthine-containing DNA. UDG family 6 hypoxanthine-DNA glycosylase lacks any detectable UDG activity; it excises hypoxanthine. Other UDG families include one represented by Bradyrhizobium diazoefficiens Blr0248 which prefers single-stranded DNA and removes uracil, 5-hydroxymethyl-uracil or xanthine from it.	7.08777e-99
AP019309.1\|BBH28017.1\|3155099_3157814_-\|membrane-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	4.81555e-110
AP019309.1\|BBH28024.1\|3165868_3169864_-\|CRISPR-associated-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	2.38637e-164
AP019309.1\|BBH28012.1\|3145862_3147194_-\|proton/glutamate-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	6.01718e-129
AP019309.1\|BBH28022.1\|3164689_3164896_-\|hypothetical-protein	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.3322e-13
AP019309.1\|BBH28028.1\|3174527_3175094_+\|hypothetical-protein	gnl\|CDD\|239824	cd04332, YbaK_like, YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, ProX, and PrdX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express an INS homolog in trans (e.g. YbaK, ProX, or PrdX).	0.0014914
AP019309.1\|BBH28026.1\|3172034_3173420_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.59566e-06
AP019309.1\|BBH28011.1\|3145087_3145849_-\|RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.77297e-44
AP019309.1\|BBH28018.1\|3157966_3158548_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	7.96639e-11
AP019309.1\|BBH28029.1\|3175129_3176092_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.33578e-47
AP019309.1\|BBH28021.1\|3164012_3164693_-\|hypothetical-protein	gnl\|CDD\|213407	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.01122e-29
AP019309.1\|BBH28013.1\|3147190_3148042_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224016	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].	1.2987e-71
AP019309.1\|BBH28020.1\|3159164_3160235_-\|hypothetical-protein	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	5.43625e-47
AP019309.1\|BBH28015.1\|3152232_3154170_-\|methionine--tRNA-ligase	gnl\|CDD\|237028	PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed.	0

>AP019309.1|BBH28020.1|3159164_3160235_-|hypothetical-protein
MYMLFLIGGVSALLTSIYLRFFIIRFLGSFINMTITIKVVITIIAVLLALPAVNFLGLYAVLYYYFLAACAVFGLISHFVPAGMLKGLLQSGLLSVVAVCLIMGYGYYNMHHVVETDYTIKSNKINNLKILLISDLHTDQVFNPRQINGLVQKMNKVNPDLVVLDGDIFDENTPKKDMLAATKALSQLHNKLGIYYVYGNHDDSKYGNWHTSNRSHSNASDIRTAMENNHITVLDDDVKNIGKITLIGRRDASYDRKLTDDLLKDVNKDQYIIMLDHQPLEIQKNAKKGVDLQLSGHTHGGQIWPTGYLNDFMPGSMRYGNKTIGSFHAITTSGLAGWGFPIKTGSPSEYVVINVK
>AP019309.1|BBH28019.1|3158519_3159023_-|hypothetical-protein
MPENKKQGFIFGVIMSYAMAFGMEIYNSAINLGFDLKAGGFSNMTNKVFAAAMSEILWIGIVVIILSSLYGNKFGEHFMLTHTKEDDPAYFKVLMRQAGTIAVMCPSMSMFATLAFFLIPGVVPVSQLPAVFVGTLIKNFPMAFFWNMFGAAPFTRWAFSHVKRFLD
>AP019309.1|BBH28018.1|3157966_3158548_+|TetR-family-transcriptional-regulator
MKNMKKTDRRVRKTRTLLKNGLIKLMKEKSIKEITVQELVDEVDINRSTFYLHYKDIYDLVEQLEQEVFDSFKMLINDFGEKKEDEKFLIALYQNIENYGDLAQALISSHGDMSFVHRLIMTIRGEIAPYVEDIITQKSDIQNEYIYEYCLFGTLGLIKKWMDRGFQETAEVMAKVTNQLLIENINQGNVSHG
>AP019309.1|BBH28017.1|3155099_3157814_-|membrane-protein
MVKNEWKNLFKNKLMIVVLVAIILIPSIYTTFFLGSMWDPYGKLDNLPVAVVNEDQAVKFNGTTLHVGKDLAKNLEKNDSLRFEVTNKANARNGLNGKDYYMMIVIPKDFSKNATTVLDKSPKKMELQYYTTPGKNYIAAKMSESAMSKLKAKVSSSVTQTYAKVIASSITTAANGMDKAANASGQLANGANTAKQGSSTITKNLNKLTSGSLTFKNGAETLTVGLKKYTSAVSTALQGTNKLANGSAQLTKGSKQLASGISQYTNGTNQYVDAVNKYTDGVNTIKNGSQQLSALTQLGQISTGVTQISNAINGISGSLKQGTSSLATGLKQIDDQVNALKNSNINEQLSSLNSAVTGTKTIVSKSKTGIDQAQSGLGQISTSLTALSSQVGTMADTFAGAANKQIAAQNVASNAKIDQAIATVKASSMSDEEKQNVVNSLNNAKVNTTVDLSAVANAYKEKLGAASTQLTTASASMKTLSDALNSADGYLTQIETGLASSKAIDTNMINKLAAALDTAYAGAVKVDQGVNSLGSAVDTLEVSTNKLPKAAAGYSSLSAGIDKLQANNKALVDAGTKLTGSAKTLNAGASSAVNGMKQLNTGVHSLQSGLKAIQANNKTLNNGSAKLSSAAGTIANGSSQLASGSATLTSGLSKIEDGNGQLASSLATGANTMKKANLKTANQKMIAAPVAGKETKVHNIKNNGYAMAAYMLNVGMWVGCIAFTIMYPLIKRNGKVKNGLSWWLGKATIAYPISIAMAFVMVGILHAVLGFTPANMGQTLLLASVTGITYMSILYFFNALIGKVGSFVMLVFTVIQLGGSAGTYPLEISGRFVNMVHPYLPFSYAVDAYRKVISGAGSISFDLSILLIIAGVFTVLTIMLFSYRDVRIKAGKPVLSTFIEEKGF
>AP019309.1|BBH28016.1|3154439_3155087_-|uracil-DNA-glycosylase
MARPLSILIEEMKIRVTINAVMKMDIIEEIMQDPRNKEYTERGCKPILQVSEKAKVLIIGQAPGKKVEESEIPFNDASGVTLRQWMGIDEKTFYSEEIAIMPMDFYYPGKAKTGDLPPRPFVAKSYHKQILAMMPHIQLTILVGNYATSYYLKGMKKKNLTETVRHYQDYLPQYFPIVHPSPLNNIWQKKNPWFKETVVLKLQEEVKKALLSKED
>AP019309.1|BBH28015.1|3152232_3154170_-|methionine--tRNA-ligase
MKDPKDFYLTTAITYASGKPHIGNTYEIVLSDAIVRNKRQQGYNVRFQTGTDEHGQKIENKAKEAGVEPKAYVDKVAGEVKRIWDLMDASYDKFIRTTEPYHEKQVQKAFKKLYDKGDIYLGKYEGKYCTACESFWTESQLVDGMCPDCGGPVVDASEPAYFFKLSKYQDRLMKYYNDHPDFIEPESRKNEMVNNFLKPGLQDLCVSRTSFKWSIPVDFDQKHVVYVWIDALLNYITGLGYDVDGNNDELFEKFWPADVHIIGKDIVRFHTIYWPIILMALDLPLPKQVFGHPWLLMGDSKMSKHLGNVIYADDLVDMFGVDAVRYYLLHEIPYDNDGSITWDLVVERINSDLANILGNLVNRTIAMSNQYFGGVVADKDVYEPVDDELKQIALAMPGKVNAYMDEFKTAKALDEIFVLLRRTNKYIDDTTPWLLAKDESKKDRLATVLYNLIEAIRFAAIALEAFMPSTSKKILDMINTDERDLMQLDHFGAYHSGNKVTDHPEVLFARLKPAEVAKKVEALMPKKPKKEEKKKAAEVEEITIDDFAKVELVVGEVVACEKHPKADRLLVEQIDIGDEKRQIVSGIAQYYTPEEMIGKKVVVVKNLKPAKLRGVESQGMILCSTTKKDLKVIDPGDLPNGSQVR
>AP019309.1|BBH28014.1|3148210_3152095_-|hypothetical-protein
MGQLQQQELLQNLQWVNSISGTKDHTIFKKEENYYLKHSSVLCVVRLAQYAQLAESKDKEYISTILRLVGRLLQRHFGLDHVYYFEEGIFVILAKKLFDLEFETHIQQIVRDWSILEIEHEKVNIHLRAGYLYGCPVDQKEIEDMYQHCLDFAMHTDSVYGTEYFSLINVTENNVLQFYETDTTDKITGLLTKEDFLKLCPKIIEKAHLNNQKIYIMYLNILNFKLFNDNYGYDKGNQFLVEFAKVLRKQYPNHFIARFEADHFYVMLYETDFKADLEAIQKAIRQGAHSVYLGVKAGICEIPLEDTLSFETYCDRAKVSADYIKKTNKMYRIYSDNFSGKNVREKYIIEHFREALEKKWIKLYFQPVVRTINEELCSMEVLARWEDPTYGLLPPILFIPVLEDYHLIHHLDMYIIETLCKVYRQRQDAHQVTYPVSFNLSRLDFELCDIFDVIETNSRNYRVPKSYLNIEITESIMTDNEEFMKAKIHQFQDAGYAVWIDDFGSEYSSLNTLKEYEFDELKIDMKFLSEFSRKSKQIIASIVNMAKQLGIQTLAEGVETKEQYDFLRGIGCEKVQGYYFSKPLPIDEMFHVLNEKNIHGENTIYSEYYDRIGRVDLLSSHPFDFKRLDNYESAEPLAIMQYKDYKLSYINANQAYFGFLKSLGVYSLKESEILINDESWNISAHFKAIADKTRDTDKIEYLDFFDQDNHCVLEVKGIASNKDSVSFLVHGENLSKTNVGLRHEDELNTSLRIVYSLFEHIYLIDQSDHKAHTLYTNAHFSSLNDAEDIDEVVNRFYNEEVYIDDRLRFKKFLAKDSLSERIEKADDKTLRGLFRIKRRNGVYKWTLVTIKKLFRSGHMKGIVALSDMEKDQFAVMQTKALNTNQVQDTQGLNTDVLWNNILQTDFGIFWKDDQRRFLGANSVFKEYYEIVDDSQFIGKTDEELGWNVDPVRFNRVEERVLKEGEVVRGEIGESIVHGNMKTIVTDKQPIYSNDGKIVGLLGYFREVAQYRKIKERMKSLAQYDELTDSVNSQGLREGAHNFVESYDFRHIDFALTIFKLENLKEFVNAYGYSMGEEMIKSVFEILKKTFGMNSLLGHPEFDILTILHQTSPYGDYQRRVEEVQEQIQKINRIAGIRYNIYTTVSTTYYSEVEDFEKMKYLGLARLEMKNMKKDHLIAEDIPQFTRQEIINEMRRFMRIFDVVRLVDPDCNSSKTLDREGQLFTVPRKCYGLLGKDGRCLNCISRKTIETHESQNKVEKTPDGDYFVVSRFVVVEGKEYSLELIKKITITNNDF
>AP019309.1|BBH28013.1|3147190_3148042_-|NAD(P)-dependent-oxidoreductase
MSLNTRIWITGAQGRLGSALARHFDRTTDYEILTSDLDVPVDDRAQVIRFADLNHPDIIVNCAAISDNNYCEEHPDDAFRVNAIGARNLAIAARRIDAKLIHISTDDVFGLEFERPRNEFEHPQPRTVYGKSKLAGEELVQKLHDKHAIIRSSWIYGSNYDEMDEVLQKAKRGETIQVPMKQYSTPTTCKALVDFITTLLDVSEYGIFHASCRGACHRREFIEEAIRLAGYEANIEVVDEDSLRPPFSVLDNMMLRITGIYQMPDWHDDLKAYIERRKKRGVL
>AP019309.1|BBH28012.1|3145862_3147194_-|proton/glutamate-symporter
MKTNNKKKLGLTTKIFIALILGALIGIVINLTCIKNPFVSKYVVQGLFYVVGQAFIRGMQMLVVPLVFVSIATGAAAIGDTKTLGKVGVKTVIFYLITTILAVTVALGVANLINPGQGANLSKLESIAKTATTTVSTTGAATKTSMVDTLLNIIPTNPVQALANGDMLAIIFFAVLIGIILAKLGDKTQQVHNLLNQCNDIMMEMTMMVMKVAPVCVFCLIARTFSTLGYSVMFYMLKYMIAVILALAVQCLVVYQIMLKVTTGLSPFVFLKKFFPVQAFAFSTATSNATIPMNIDTLYEKMGVSKRISSFTIPLGATVNMDGTSIMQGVAVVFVAQAFGIHLSLANYITVIATATLASIGTAGVPSVGLITLTMVFNSVGLPVSGISMIMGIDRILDMIRTAVNITGDAVCTTVVAYQNGDVDKDVYYSDVKKDLEEAHSEA
>AP019309.1|BBH28011.1|3145087_3145849_-|RpiR-family-transcriptional-regulator
MFDNKAIASLNETEAKIYRYVIDSIDDIARLGVRELANDTFTSTATVIRMYKKLGCNSFEEFKHALYSYFHNDQFSLENEKKSLSKTMEFLMSSDFDRVIDQATDLIMASRSMTIFGIGNSGAIARYGARYLSNVGYFAVAVGDPFYPPDLRTDENTLAIAVSESGETNELIDQLMNYKSRGAKVIVITAAPHSTLALMADLVIRFYAERYMLPQTYSLTSEMSVVYIFERLGRELFKRDKRILKSTPHSVHA
>AP019309.1|BBH28021.1|3164012_3164693_-|hypothetical-protein
MKFLIMGYDDPIDFGHGDNTQLVVEDTKLYTHIVQLLNAIINEKYKTNEIEILEDKSDKDILSKAILIINPFQLDLNAKPIIKALYEEVSKILIDDGDQFLQYKEYITDINKIVLDIIEEFNVDFSFDDDLPLEGYLKAINLKITKDPEEPMFDTFLNYIELISELTPKTPLIICNCLSYFTKHEIEELCKYMNYKCMNVLFIENHCNELIPDCHQYIIDDDLCMI
>AP019309.1|BBH28022.1|3164689_3164896_-|hypothetical-protein
MMQESVYSKLALNNSIVKAETKRLEENKPSAGDVELLVITEKQYSQIQFLVGERKTDVEDSDARLIVL
>AP019309.1|BBH28023.1|3164999_3165872_-|CRISPR-associated-endonuclease-Cas1
MSWRTVVINSKAKLSYKNDYMIIRGENVNQIHLSEINTVVINSTAVTITSYLIAELLNRKVKIIFCDNRRDPIGEVLPYYGCHNVSKRINEQINWDEENAQAVWTRIIKEKILNQARLLEIEGFKTSEMLKQYADELVTFDKTNREGHSAKVYFDSLFGVKFTRDAQINVNAALNYGYAIILSQFNRDIAAQGYLTQLGIKHKNEFNPFNLSSDLMEPFRQLVDRIVYENAKESFDSDLKLKLIDVLNHKVRIKGSNQYVSNAISIYDKSVFDALKKKDASLIEFFEYEL
>AP019309.1|BBH28024.1|3165868_3169864_-|CRISPR-associated-endonuclease-Cas9
MNKKDTSYSIGLDIGTNSVGWAVMDSHYNLLKKDNHHMWGSRLFEQANPASERRLSRSARRRYNKRRERIRLLQGIMESMIAEVDPTFYIRLTHSSFLDREDKEKIGQENGFEVKNQYNLFIDDTFNDQTYYKKYKTIYHLRKHLMTSTEKEDPRLIYLALHHIVKYRGNFLYEGHSFNMDSADIEKKIYAALEQFFDLNEFENNLDDEHVQLLVELLKKTKQRSQKRDEIVNTFIFDKKDKAIYKELANALVGLQFNVTKLLPAKDINKDGKAISLKFDDANYDANLAENEAELGESIEFIVALHDIYSWVELQAILGASHTENPSISEAMVSRYDDFKNDLLLLKKVVKESLPDCYNEVFRKDGEKLHNYTGYMSHPGKTSVEDFYKYIKNLLKNVNTEDAQTIKEKMDLETFLVKQNSRTNGAVPYQMQEYEMEQIIDHQAEFYPLLAENKDKLMSILTYRIPYYVGPLNSNSPFAWIKKVEGKENERIHPWNANEVIDIDATAEGFIKRMLSYCTYFPDEEVLPKMSLTISRFEVLNELNKIRVNGKKIKPDIKKSILDDLFMNNKKVTRKKLDGWLKAHQVYKLSDELEITGFQKEDEFSTSLTPWIDFTKIFGEINQDNYDLIESIIFDLTIFEDKKILKRRLQNNYHLDHDQIEQIMRLRYKDWSRLSRKLLLGIRSKNHNETVMDILENTNHNLMEIINDDKYGFNKIIDAANEKEEDGPFTYEEVEKLAGSPALKRGIWQSLMIVEEITKYMQHRPTNIYIEFAREEGEKVRTTSQIKRLQAIYRELDLETEKDKEVYKSLNNEDDKKINTDALYLYYTQMGKSMYSGKPLDIDKLDTYQIDHIIPQSLIKDDSFDNRVLVLPEENQFKLDQPTVPAEVRNKMIGFWTKLLENKLISKKKFFNLIKTEYNEKDQERFINRQLVETRQIIKNVANIIMNHYKGTDVRTVRANISHDFRKRYDIYKSRDLNDYHHAHDAYIACVVGNYIKCRFKYLDTKYIYGQYFKNYKKDAKKRNNDGFVLNSMVNAYCDEDTGETIWDPAWISKIKKCFYYKDVYITKKLERNDGVLFNLTVVTNDAHSNKGITEASVPVNKYRADIHKYGGFKNLQYQIFEIHGHKQKGKKVVKVDKLTQLPIYLSHASNEEKEKYVLENESLIDVKIGREILKNQLIEIDGGLYYVTSPTEYVTAKQLCVNEHVAKILDQIQKAQKYKKYNQVNDEDLLYVYDTLLDKMDKLYPAYNNIRNKFIDKRDDFQTISLEERCEVIRQILITLHAGPQNGNINFDDFKISNRIGRLGGKTIDLSKTVFYADSVTGLYRKKFKL
>AP019309.1|BBH28025.1|3170495_3171866_+|aldehyde-dehydrogenase
MNIEEIYKTQKAYFNSFETRNVEKRKDVLTRIMNWLEEHEDDINQALKLDLGKTRAEAYLSEIGLIYDAFSVIEKNIDKWTKRRKVGSPIRALLFRSFTVYEPYGTVLVMSPWNYPYLLSMEPVLYAIAAGNTVVLKPSEYAPNTAEIFTRLAEDLGEPGLLSVIQGDARTSRELLTYKWDYIFFTGSTSVGKVVYKRAAENLTPVTLELGGKSPTIVTNSIDIDVAAKRIAFGKFLNAGQTCVAPDYVFVHESVKDQFIDRLKHYIHEFFGDNPLESESLCKIINRKHFNRLLSLVDHQNILIGGSASERSLKIAPTVIDGVQESDAIMQQEIFGPILPVMTYQDIDEVIAYINNHPKPLALYLFTEDKEIQDKVLDRCSFGGGCINDTIMHLSDHDLPFGGVGDSGIGAYHGNYSFETFSHEKSVLTSSTKRDINFRYYPLTEDKEYQIRKQLK
>AP019309.1|BBH28026.1|3172034_3173420_+|transposase
MISKQDKERNFDYETEACAFNTTPEGVNLALEKSIKMVTDNIACYVIDPVSDMTRSRKVPADMIIRFLIHKEGKSIRSEICEQMPEGMEFQASAFCMQRYKIKPNAFNRVMTLFNQTIKPKNTFNGYYIIACDGSDLNIPFMKDHPELIVKSKKGRDFCQIHLNALYDCLNGVYWDAEMTTPNKKREPGALITMTERKYYPEKSIIVCDRGYVSYKLMADFIEKGQKFVIRSKDINIRSSILKRFDLPDEELDQEVSVTLTRSNKRYNSDRKKYALVNSNIDFPQIDTWSNDDYVISYRVVRIKLDDENFVTLVTNLSKEEIPFEYMKELYHLRWSQEQSFFNLKYRIGLKYFNSKKVDGILQEVYSKLIMFNVTSVITNSVDIPDMKAEEYEKNKKRVAHKTKANFAVAITNVHLFLKGTISEKGLINRIKKFVIPIRPGRSFTRKIRPQSLAPLNTRVS
>AP019309.1|BBH28027.1|3173702_3174473_+|hypothetical-protein
MKVKHILLTAAMVVALNSGNAVYAKSSASVYVINHMKGDGNYFPDWTMSYNKNGLIQKIKWKGIKNTVYDFPRVSTYTYKGTKITKLVESTPGTKETYVYKMHYVKNKLSKIDYVGIDHYTGTKTFYYSGKNITKITDTHMPAYTFTYDQKGQLLTSRGNGGNFDCRYDKNGHFSYYFPVSINDQDNGVYYQNSYDQHHNLTKITAKKWTIYKGKPVVAARFTYKKKKVPANMVKKIKAQQRWIQTYTNDYSIYNF
>AP019309.1|BBH28028.1|3174527_3175094_+|hypothetical-protein
MKVTLQKGLYIEMDNNNQVPVIELSFKNSFEPEVLQENKELQKDTEKIGSAIIGMLSDILKEIIKDNLGDDYDLNSVIRIGAQNASNFTHMYDMYSFFGGEYMNKNEQTAEIIPTINSIIMQDEEGNYVFGFASDDDEVQISYLFSALAVTAAKLLTPDEVDSVLGFLVGAIVDDLFEEEDDDEDEYM
>AP019309.1|BBH28029.1|3175129_3176092_-|NAD(P)-dependent-oxidoreductase
MKLGIIGTGKIVADLMETYDLLPIEKTYILSTPRSVEKAQKIADEHHFAGVYTSYEDLLQSDIDTVYIALPNHLHYDYALQAINAHKHVICEKPFVVNSLQFDTLVQAAKEAHVFLLEAMTIHAMPAYQALKKDLSSLGSIKIVSLNYSQYSSRYDAFKEGTILPAFDVHKAGGALYDLNVYNINFMIGLFGAPQKVNYLANIAHGIDTSGILTMDYGSFKAVLIGAKDCAAPLMNTIQSDDGSILIDTPVSRMTHYNIKNQLKDYDEQHHAMYYEFKEFIRIIHENDEKKAEELLSYTEMEADILTQARQSAGIVFDQD
>AP019309.1|BBH28030.1|3176283_3177114_-|NADH-pyrophosphatase
MIQDIEPHILNNSYDPNKKPQADSLIFSFRKRSVLVTEDFTFPTYAQMPAEAEYVYLFSLDDRDCFLIKHHVRLEGYYYEDVWNLRNDDEDFAPYLLAVVTAYSLSNWYRHNRYCGYCGVETTLADDERAIVCPHCGNRIYPRLNPAVIVGVMHGDEILITKYAQGYGHNALIAGFVEIGETLEQTVAREVMEEVGLKVKNIRYYKSQPWGFVDDILMGFYCVVDGDTKIKLDTSELKKGVWTKREDIHLQPDHLSLTNEMMEMFQKGLIDESYCD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
AP019309_2	2.2\|1638737\|27\|AP019309\|CRISPRCasFinder	1638737-1638763	27	AP019309.1	1653246-1653272	0	1.0

1. spacer 2.2|1638737|27|AP019309|CRISPRCasFinder matches to position: 1653246-1653272, mismatch: 0, identity: 1.0

gtttttataatgcagaaaaacgatgat	CRISPR spacer
gtttttataatgcagaaaaacgatgat	Protospacer
***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP019309_4	4.45\|3163733\|30\|AP019309\|CRISPRCasFinder,CRT	3163733-3163762	30	MN693889	Marine virus AFVG_250M624, complete genome	269-298	3	0.9
AP019309_4	4.89\|3163734\|30\|AP019309\|PILER-CR	3163734-3163763	30	MN693889	Marine virus AFVG_250M624, complete genome	269-298	3	0.9
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	NC_019764	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence	33741-33770	5	0.833
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	922211-922240	5	0.833
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	NC_019764	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence	33741-33770	5	0.833
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	922211-922240	5	0.833
AP019309_2	2.2\|1638737\|27\|AP019309\|CRISPRCasFinder	1638737-1638763	27	NZ_CP019231	Bacillus thuringiensis strain YGd22-03 plasmid pYGD30, complete sequence	1368-1394	6	0.778
AP019309_2	2.2\|1638737\|27\|AP019309\|CRISPRCasFinder	1638737-1638763	27	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	892786-892812	6	0.778
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP044515	Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence	26658-26687	6	0.8
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NC_025136	Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence	25737-25766	6	0.8
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP044511	Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence	26607-26636	6	0.8
AP019309_4	4.26\|3162477\|32\|AP019309\|CRISPRCasFinder,CRT	3162477-3162508	32	NC_041883	Gordonia phage Attis, complete genome	42863-42894	6	0.812
AP019309_4	4.26\|3162477\|32\|AP019309\|CRISPRCasFinder,CRT	3162477-3162508	32	MK801734	Gordonia phage LordFarquaad, complete genome	42844-42875	6	0.812
AP019309_4	4.26\|3162477\|32\|AP019309\|CRISPRCasFinder,CRT	3162477-3162508	32	NC_031251	Gordonia phage SoilAssassin, complete genome	42862-42893	6	0.812
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	206634-206663	6	0.8
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	KX833905	Lactococcus phage PLg-TB25, complete genome	24044-24073	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	96605-96634	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	148872-148901	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	55824-55853	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	69536-69565	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	62563-62592	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	85848-85877	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP040905	Enterococcus faecium strain N56454 plasmid unnamed, complete sequence	79394-79423	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	149748-149777	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP050649	Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE	6707-6736	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP050651	Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT	17731-17760	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	95062-95091	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	350-379	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	114976-115005	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	175557-175586	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	80482-80511	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	54804-54833	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	74115-74144	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	74117-74146	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_LR134096	Enterococcus faecium isolate E1334 plasmid 2	62399-62428	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	80487-80516	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	153445-153474	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	136723-136752	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	85848-85877	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	104778-104807	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	131385-131414	6	0.8
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	65435-65464	6	0.8
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP044515	Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence	26658-26687	6	0.8
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NC_025136	Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence	25737-25766	6	0.8
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP044511	Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence	26607-26636	6	0.8
AP019309_4	4.70\|3162478\|32\|AP019309\|PILER-CR	3162478-3162509	32	NC_041883	Gordonia phage Attis, complete genome	42863-42894	6	0.812
AP019309_4	4.70\|3162478\|32\|AP019309\|PILER-CR	3162478-3162509	32	MK801734	Gordonia phage LordFarquaad, complete genome	42844-42875	6	0.812
AP019309_4	4.70\|3162478\|32\|AP019309\|PILER-CR	3162478-3162509	32	NC_031251	Gordonia phage SoilAssassin, complete genome	42862-42893	6	0.812
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	206634-206663	6	0.8
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	KX833905	Lactococcus phage PLg-TB25, complete genome	24044-24073	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	96605-96634	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	148872-148901	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	55824-55853	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	69536-69565	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	62563-62592	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	85848-85877	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP040905	Enterococcus faecium strain N56454 plasmid unnamed, complete sequence	79394-79423	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	149748-149777	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP050649	Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE	6707-6736	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP050651	Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT	17731-17760	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	95062-95091	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	350-379	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	114976-115005	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	175557-175586	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	80482-80511	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	54804-54833	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	74115-74144	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	74117-74146	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_LR134096	Enterococcus faecium isolate E1334 plasmid 2	62399-62428	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	80487-80516	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP040850	Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence	153445-153474	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	136723-136752	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	85848-85877	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	104778-104807	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	131385-131414	6	0.8
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NZ_MG674581	Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence	65435-65464	6	0.8
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	NZ_CP014311	Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence	8051-8080	7	0.767
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	KU726251	Enterobacteria phage SEGD1, complete genome	205454-205483	7	0.767
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	MT679221	Proteus phage 7, complete genome	208582-208611	7	0.767
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	NC_027402	Salmonella phage SPN3US, complete genome	206715-206744	7	0.767
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	MT799840	Salmonella phage JN03, complete genome	207090-207119	7	0.767
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	LR535912	XXX	34314-34343	7	0.767
AP019309_4	4.14\|3161685\|30\|AP019309\|CRISPRCasFinder,CRT	3161685-3161714	30	MN582062	Microviridae sp. ctGWf34, complete genome	3769-3798	7	0.767
AP019309_4	4.14\|3161685\|30\|AP019309\|CRISPRCasFinder,CRT	3161685-3161714	30	MN582053	Microviridae sp. ctjWc39, complete genome	3769-3798	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP053930	Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence	162696-162725	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	289235-289264	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	151910-151939	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP040341	Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence	175896-175925	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP033789	Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence	94789-94818	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_KY940428	UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence	121041-121070	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP036355	Bacillus sp. SYJ plasmid unnamed1, complete sequence	110199-110228	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP053290	Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence	261150-261179	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	26027-26056	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NC_011655	Bacillus cereus AH187 plasmid pAH187_270, complete sequence	96664-96693	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NC_010924	Bacillus cereus strain AH187 plasmid pCER270, complete sequence	153073-153102	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	CP045776	Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence	142388-142417	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP042928	Bacillus cereus strain G1-1 plasmid unnamed, complete sequence	127354-127383	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	10424-10453	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NC_016792	Bacillus cereus NC7401 plasmid pNCcld, complete sequence	151942-151971	7	0.767
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NZ_CP009299	Bacillus cereus D17 plasmid unnamed, complete sequence	14704-14733	7	0.767
AP019309_4	4.29\|3162677\|30\|AP019309\|CRISPRCasFinder,CRT	3162677-3162706	30	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1243254-1243283	7	0.767
AP019309_4	4.30\|3162743\|30\|AP019309\|CRISPRCasFinder,CRT	3162743-3162772	30	MN692984	Marine virus AFVG_117M10, complete genome	29897-29926	7	0.767
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	NZ_CP054832	Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence	38592-38621	7	0.767
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	NZ_LR214994	Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3	13350-13379	7	0.767
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	MN693565	Marine virus AFVG_25M347, complete genome	51125-51154	7	0.767
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	257007-257036	7	0.767
AP019309_4	4.39\|3163337\|30\|AP019309\|CRISPRCasFinder,CRT	3163337-3163366	30	MN694088	Marine virus AFVG_250M454, complete genome	17023-17052	7	0.767
AP019309_4	4.39\|3163337\|30\|AP019309\|CRISPRCasFinder,CRT	3163337-3163366	30	MN694007	Marine virus AFVG_250M456, complete genome	17054-17083	7	0.767
AP019309_4	4.39\|3163337\|30\|AP019309\|CRISPRCasFinder,CRT	3163337-3163366	30	MN694027	Marine virus AFVG_250M455, complete genome	34574-34603	7	0.767
AP019309_4	4.41\|3163469\|30\|AP019309\|CRISPRCasFinder,CRT	3163469-3163498	30	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	593103-593132	7	0.767
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	950519-950548	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	NZ_CP014311	Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence	8051-8080	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	KU726251	Enterobacteria phage SEGD1, complete genome	205454-205483	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	MT679221	Proteus phage 7, complete genome	208582-208611	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	NC_027402	Salmonella phage SPN3US, complete genome	206715-206744	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	MT799840	Salmonella phage JN03, complete genome	207090-207119	7	0.767
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	LR535912	XXX	34314-34343	7	0.767
AP019309_4	4.58\|3161686\|30\|AP019309\|PILER-CR	3161686-3161715	30	MN582062	Microviridae sp. ctGWf34, complete genome	3769-3798	7	0.767
AP019309_4	4.58\|3161686\|30\|AP019309\|PILER-CR	3161686-3161715	30	MN582053	Microviridae sp. ctjWc39, complete genome	3769-3798	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP053930	Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence	162696-162725	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	289235-289264	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	151910-151939	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP040341	Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence	175896-175925	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP033789	Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence	94789-94818	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_KY940428	UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence	121041-121070	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP036355	Bacillus sp. SYJ plasmid unnamed1, complete sequence	110199-110228	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP053290	Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence	261150-261179	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	26027-26056	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NC_011655	Bacillus cereus AH187 plasmid pAH187_270, complete sequence	96664-96693	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NC_010924	Bacillus cereus strain AH187 plasmid pCER270, complete sequence	153073-153102	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	CP045776	Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence	142388-142417	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP042928	Bacillus cereus strain G1-1 plasmid unnamed, complete sequence	127354-127383	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	10424-10453	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NC_016792	Bacillus cereus NC7401 plasmid pNCcld, complete sequence	151942-151971	7	0.767
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NZ_CP009299	Bacillus cereus D17 plasmid unnamed, complete sequence	14704-14733	7	0.767
AP019309_4	4.73\|3162678\|30\|AP019309\|PILER-CR	3162678-3162707	30	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1243254-1243283	7	0.767
AP019309_4	4.74\|3162744\|30\|AP019309\|PILER-CR	3162744-3162773	30	MN692984	Marine virus AFVG_117M10, complete genome	29897-29926	7	0.767
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	NZ_CP054832	Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence	38592-38621	7	0.767
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	NZ_LR214994	Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3	13350-13379	7	0.767
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	MN693565	Marine virus AFVG_25M347, complete genome	51125-51154	7	0.767
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	257007-257036	7	0.767
AP019309_4	4.83\|3163338\|30\|AP019309\|PILER-CR	3163338-3163367	30	MN694088	Marine virus AFVG_250M454, complete genome	17023-17052	7	0.767
AP019309_4	4.83\|3163338\|30\|AP019309\|PILER-CR	3163338-3163367	30	MN694007	Marine virus AFVG_250M456, complete genome	17054-17083	7	0.767
AP019309_4	4.83\|3163338\|30\|AP019309\|PILER-CR	3163338-3163367	30	MN694027	Marine virus AFVG_250M455, complete genome	34574-34603	7	0.767
AP019309_4	4.85\|3163470\|30\|AP019309\|PILER-CR	3163470-3163499	30	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	593103-593132	7	0.767
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	950519-950548	7	0.767
AP019309_4	4.8\|3161289\|30\|AP019309\|CRISPRCasFinder,CRT	3161289-3161318	30	AP013545	Uncultured phage_MedDCM-OCT-S46-C10 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S46-C10	550-579	8	0.733
AP019309_4	4.14\|3161685\|30\|AP019309\|CRISPRCasFinder,CRT	3161685-3161714	30	NC_027332	Acinetobacter phage YMC13/03/R2096, complete genome	22185-22214	8	0.733
AP019309_4	4.14\|3161685\|30\|AP019309\|CRISPRCasFinder,CRT	3161685-3161714	30	KY000079	Acinetobacter phage AM24, complete genome	29749-29778	8	0.733
AP019309_4	4.16\|3161817\|30\|AP019309\|CRISPRCasFinder,CRT	3161817-3161846	30	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	14815-14844	8	0.733
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	MH319745	Marine virus AG-345-E15 Ga0172270_15 genomic sequence	9110-9139	8	0.733
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	MN180251	UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence	81471-81500	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	6386-6415	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_KY303941	Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence	50320-50349	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_KU513859	Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence	43669-43698	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	MK134858	Listeria monocytogenes plasmid pLM1686, complete sequence	52032-52061	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_HG813248	Listeria monocytogenes R479a plasmid pLMR479a, complete sequence	43669-43698	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_CP013725	Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence	60683-60712	8	0.733
AP019309_4	4.34\|3163007\|30\|AP019309\|CRISPRCasFinder,CRT	3163007-3163036	30	NZ_CP014851	Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence	21709-21738	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883636	Vibrio phage JSF1, complete genome	69436-69465	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883637	Vibrio phage JSF2, complete genome	22357-22386	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY065147	Vibrio phage JSF4, complete genome	95306-95335	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883639	Vibrio phage JSF14, complete genome	100179-100208	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641348	Vibrio phage ICP1_2006_D, complete genome	101687-101716	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883634	Vibrio phage JSF5, complete genome	59649-59678	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641354	Vibrio phage ICP1_2004_A, complete genome	105347-105376	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641349	Vibrio phage ICP1_2006_C, complete genome	101687-101716	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883635	Vibrio phage JSF6, complete genome	61308-61337	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	MH310934	Vibrio phage ICP1_2006_E, complete genome	105478-105507	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641353	Vibrio phage ICP1_2001_A, complete genome	100752-100781	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641352	Vibrio phage ICP1_2005_A, complete genome	105293-105322	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883640	Vibrio phage JSF17, complete genome	95169-95198	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	MH310933	Vibrio phage ICP1_2011_A, complete genome	104542-104571	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	MN419153	Vibrio phage ICP1_2017_F_Mathbaria, complete genome	107347-107376	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641350	Vibrio phage ICP1_2006_B, complete genome	99017-99046	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	MN402506	Vibrio phage VMJ710, complete genome	66450-66479	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	HQ641351	Vibrio phage ICP1_2006_A, complete genome	99024-99053	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	MH310936	Vibrio phage ICP1, complete genome	97179-97208	8	0.733
AP019309_4	4.36\|3163139\|30\|AP019309\|CRISPRCasFinder,CRT	3163139-3163168	30	KY883638	Vibrio phage JSF13, complete genome	44348-44377	8	0.733
AP019309_4	4.40\|3163403\|30\|AP019309\|CRISPRCasFinder,CRT	3163403-3163432	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	35176-35205	8	0.733
AP019309_4	4.40\|3163403\|30\|AP019309\|CRISPRCasFinder,CRT	3163403-3163432	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	2722-2751	8	0.733
AP019309_4	4.40\|3163403\|30\|AP019309\|CRISPRCasFinder,CRT	3163403-3163432	30	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	20802-20831	8	0.733
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	KT997868	Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome	17287-17316	8	0.733
AP019309_4	4.42\|3163535\|30\|AP019309\|CRISPRCasFinder,CRT	3163535-3163564	30	NC_015419	Clostridium botulinum BKT015925 plasmid p5BKT015925, complete sequence	2144-2173	8	0.733
AP019309_4	4.44\|3163667\|30\|AP019309\|CRISPRCasFinder,CRT	3163667-3163696	30	NZ_CP033463	Brevibacillus laterosporus strain 1821L plasmid p1821L03, complete sequence	3092-3121	8	0.733
AP019309_4	4.46\|3163799\|30\|AP019309\|CRISPRCasFinder,CRT	3163799-3163828	30	NZ_CP023066	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence	122000-122029	8	0.733
AP019309_4	4.52\|3161290\|30\|AP019309\|PILER-CR	3161290-3161319	30	AP013545	Uncultured phage_MedDCM-OCT-S46-C10 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S46-C10	550-579	8	0.733
AP019309_4	4.58\|3161686\|30\|AP019309\|PILER-CR	3161686-3161715	30	NC_027332	Acinetobacter phage YMC13/03/R2096, complete genome	22185-22214	8	0.733
AP019309_4	4.58\|3161686\|30\|AP019309\|PILER-CR	3161686-3161715	30	KY000079	Acinetobacter phage AM24, complete genome	29749-29778	8	0.733
AP019309_4	4.60\|3161818\|30\|AP019309\|PILER-CR	3161818-3161847	30	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	14815-14844	8	0.733
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	MH319745	Marine virus AG-345-E15 Ga0172270_15 genomic sequence	9110-9139	8	0.733
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	MN180251	UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence	81471-81500	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	6386-6415	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_KY303941	Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence	50320-50349	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_KU513859	Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence	43669-43698	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	MK134858	Listeria monocytogenes plasmid pLM1686, complete sequence	52032-52061	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_HG813248	Listeria monocytogenes R479a plasmid pLMR479a, complete sequence	43669-43698	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_CP013725	Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence	60683-60712	8	0.733
AP019309_4	4.78\|3163008\|30\|AP019309\|PILER-CR	3163008-3163037	30	NZ_CP014851	Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence	21709-21738	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883636	Vibrio phage JSF1, complete genome	69436-69465	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883637	Vibrio phage JSF2, complete genome	22357-22386	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY065147	Vibrio phage JSF4, complete genome	95306-95335	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883639	Vibrio phage JSF14, complete genome	100179-100208	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641348	Vibrio phage ICP1_2006_D, complete genome	101687-101716	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883634	Vibrio phage JSF5, complete genome	59649-59678	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641354	Vibrio phage ICP1_2004_A, complete genome	105347-105376	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641349	Vibrio phage ICP1_2006_C, complete genome	101687-101716	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883635	Vibrio phage JSF6, complete genome	61308-61337	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	MH310934	Vibrio phage ICP1_2006_E, complete genome	105478-105507	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641353	Vibrio phage ICP1_2001_A, complete genome	100752-100781	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641352	Vibrio phage ICP1_2005_A, complete genome	105293-105322	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883640	Vibrio phage JSF17, complete genome	95169-95198	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	MH310933	Vibrio phage ICP1_2011_A, complete genome	104542-104571	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	MN419153	Vibrio phage ICP1_2017_F_Mathbaria, complete genome	107347-107376	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641350	Vibrio phage ICP1_2006_B, complete genome	99017-99046	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	MN402506	Vibrio phage VMJ710, complete genome	66450-66479	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	HQ641351	Vibrio phage ICP1_2006_A, complete genome	99024-99053	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	MH310936	Vibrio phage ICP1, complete genome	97179-97208	8	0.733
AP019309_4	4.80\|3163140\|30\|AP019309\|PILER-CR	3163140-3163169	30	KY883638	Vibrio phage JSF13, complete genome	44348-44377	8	0.733
AP019309_4	4.84\|3163404\|30\|AP019309\|PILER-CR	3163404-3163433	30	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	35176-35205	8	0.733
AP019309_4	4.84\|3163404\|30\|AP019309\|PILER-CR	3163404-3163433	30	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	2722-2751	8	0.733
AP019309_4	4.84\|3163404\|30\|AP019309\|PILER-CR	3163404-3163433	30	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	20802-20831	8	0.733
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	KT997868	Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome	17287-17316	8	0.733
AP019309_4	4.86\|3163536\|30\|AP019309\|PILER-CR	3163536-3163565	30	NC_015419	Clostridium botulinum BKT015925 plasmid p5BKT015925, complete sequence	2144-2173	8	0.733
AP019309_4	4.88\|3163668\|30\|AP019309\|PILER-CR	3163668-3163697	30	NZ_CP033463	Brevibacillus laterosporus strain 1821L plasmid p1821L03, complete sequence	3092-3121	8	0.733
AP019309_4	4.90\|3163800\|30\|AP019309\|PILER-CR	3163800-3163829	30	NZ_CP023066	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence	122000-122029	8	0.733
AP019309_4	4.12\|3161553\|30\|AP019309\|CRISPRCasFinder,CRT	3161553-3161582	30	NZ_CP050761	Salmonella enterica subsp. enterica serovar Indiana strain SI170 plasmid pSI170-1, complete sequence	51473-51502	9	0.7
AP019309_4	4.20\|3162081\|30\|AP019309\|CRISPRCasFinder,CRT	3162081-3162110	30	NC_003276	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence	291686-291715	9	0.7
AP019309_4	4.28\|3162611\|30\|AP019309\|CRISPRCasFinder,CRT	3162611-3162640	30	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	185980-186009	9	0.7
AP019309_4	4.32\|3162875\|30\|AP019309\|CRISPRCasFinder,CRT	3162875-3162904	30	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	556308-556337	9	0.7
AP019309_4	4.33\|3162941\|30\|AP019309\|CRISPRCasFinder,CRT	3162941-3162970	30	NZ_CP044536	Borrelia sp. CA690 plasmid lp54, complete sequence	22751-22780	9	0.7
AP019309_4	4.35\|3163073\|30\|AP019309\|CRISPRCasFinder,CRT	3163073-3163102	30	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	200062-200091	9	0.7
AP019309_4	4.37\|3163205\|30\|AP019309\|CRISPRCasFinder,CRT	3163205-3163234	30	MN013077	Klebsiella phage vB_KaeM_KaOmega, complete genome	129618-129647	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	133237-133266	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	128593-128622	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	128593-128622	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	77483-77512	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	131080-131109	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	128593-128622	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	77483-77512	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	67331-67360	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	15184-15213	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	96022-96051	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	152550-152579	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	15079-15108	9	0.7
AP019309_4	4.43\|3163601\|30\|AP019309\|CRISPRCasFinder,CRT	3163601-3163630	30	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	32052-32081	9	0.7
AP019309_4	4.56\|3161554\|30\|AP019309\|PILER-CR	3161554-3161583	30	NZ_CP050761	Salmonella enterica subsp. enterica serovar Indiana strain SI170 plasmid pSI170-1, complete sequence	51473-51502	9	0.7
AP019309_4	4.64\|3162082\|30\|AP019309\|PILER-CR	3162082-3162111	30	NC_003276	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence	291686-291715	9	0.7
AP019309_4	4.72\|3162612\|30\|AP019309\|PILER-CR	3162612-3162641	30	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	185980-186009	9	0.7
AP019309_4	4.76\|3162876\|30\|AP019309\|PILER-CR	3162876-3162905	30	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	556308-556337	9	0.7
AP019309_4	4.77\|3162942\|30\|AP019309\|PILER-CR	3162942-3162971	30	NZ_CP044536	Borrelia sp. CA690 plasmid lp54, complete sequence	22751-22780	9	0.7
AP019309_4	4.79\|3163074\|30\|AP019309\|PILER-CR	3163074-3163103	30	NZ_CP022416	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence	200062-200091	9	0.7
AP019309_4	4.81\|3163206\|30\|AP019309\|PILER-CR	3163206-3163235	30	MN013077	Klebsiella phage vB_KaeM_KaOmega, complete genome	129618-129647	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_CP030831	Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence	133237-133266	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MK439382	Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence	128593-128622	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MK439383	Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence	128593-128622	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MK318986	Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence	77483-77512	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MK439384	Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence	131080-131109	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MK439381	Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence	128593-128622	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_MF511177	Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence	77483-77512	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000052	Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence	67331-67360	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000049	Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence	15184-15213	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000055	Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence	96022-96051	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000048	Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence	152550-152579	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000053	Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence	15079-15108	9	0.7
AP019309_4	4.87\|3163602\|30\|AP019309\|PILER-CR	3163602-3163631	30	NZ_KY000054	Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence	32052-32081	9	0.7
AP019309_1	1.3\|112139\|35\|AP019309\|PILER-CR,CRISPRCasFinder,CRT	112139-112173	35	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	340546-340580	10	0.714
AP019309_1	1.3\|112139\|35\|AP019309\|PILER-CR,CRISPRCasFinder,CRT	112139-112173	35	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	290117-290151	10	0.714
AP019309_1	1.3\|112139\|35\|AP019309\|PILER-CR,CRISPRCasFinder,CRT	112139-112173	35	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	314572-314606	10	0.714
AP019309_1	1.8\|112478\|34\|AP019309\|PILER-CR,CRISPRCasFinder,CRT	112478-112511	34	MN434095	Klebsiella pneumoniae phage JIPh_Kp122, complete genome	80346-80379	10	0.706

1. spacer 4.45|3163733|30|AP019309|CRISPRCasFinder,CRT matches to MN693889 (Marine virus AFVG_250M624, complete genome) position: , mismatch: 3, identity: 0.9

aacgtaaatataaacaatcgttgtcattat	CRISPR spacer
agcgttaatataaacaatcgttgacattat	Protospacer
*.*** ***************** ******

2. spacer 4.89|3163734|30|AP019309|PILER-CR matches to MN693889 (Marine virus AFVG_250M624, complete genome) position: , mismatch: 3, identity: 0.9

aacgtaaatataaacaatcgttgtcattat	CRISPR spacer
agcgttaatataaacaatcgttgacattat	Protospacer
*.*** ***************** ******

3. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to NC_019764 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence) position: , mismatch: 5, identity: 0.833

tcagcgc-ttgccataatttttaatgttgtt	CRISPR spacer
-gaacgctttgccatactttttaatgctgtt	Protospacer
  *.*** ******** *********.****

4. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 5, identity: 0.833

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
tttttcttctttctctatttgtaaatcaag	Protospacer
.**.**.******************* * *

5. spacer 4.56|3161554|30|AP019309|PILER-CR matches to NC_019764 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.04, complete sequence) position: , mismatch: 5, identity: 0.833

tcagcgc-ttgccataatttttaatgttgtt	CRISPR spacer
-gaacgctttgccatactttttaatgctgtt	Protospacer
  *.*** ******** *********.****

6. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 5, identity: 0.833

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
tttttcttctttctctatttgtaaatcaag	Protospacer
.**.**.******************* * *

7. spacer 2.2|1638737|27|AP019309|CRISPRCasFinder matches to NZ_CP019231 (Bacillus thuringiensis strain YGd22-03 plasmid pYGD30, complete sequence) position: , mismatch: 6, identity: 0.778

gtttttataatgcagaaaaacgatgat	CRISPR spacer
taatttataatgcagaaaaacaatgca	Protospacer
   ******************.***

8. spacer 2.2|1638737|27|AP019309|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gtttttataatgcagaaaaacgatgat	CRISPR spacer
gtttatacaatgcagaaaaacgagagg	Protospacer
**** **.*************** ..

9. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP044515 (Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

10. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NC_025136 (Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

11. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP044511 (Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

12. spacer 4.26|3162477|32|AP019309|CRISPRCasFinder,CRT matches to NC_041883 (Gordonia phage Attis, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

13. spacer 4.26|3162477|32|AP019309|CRISPRCasFinder,CRT matches to MK801734 (Gordonia phage LordFarquaad, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

14. spacer 4.26|3162477|32|AP019309|CRISPRCasFinder,CRT matches to NC_031251 (Gordonia phage SoilAssassin, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

15. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 6, identity: 0.8

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
ctacatattcaacaaaaaatgaaaacaata	Protospacer
  **************** * *****. **

16. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to KX833905 (Lactococcus phage PLg-TB25, complete genome) position: , mismatch: 6, identity: 0.8

taagattttttcaactcctttgaaatcctt	CRISPR spacer
gaagattttttcaattcctttggcagccgt	Protospacer
 *************.*******. * ** *

17. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

18. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

19. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

20. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

21. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

22. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

23. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP040905 (Enterococcus faecium strain N56454 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

24. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

25. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP050649 (Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

26. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP050651 (Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

27. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

28. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

29. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

30. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

31. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

32. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

33. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

34. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

35. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR134096 (Enterococcus faecium isolate E1334 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

36. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

37. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

38. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

39. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

40. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

41. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

42. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

43. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP044515 (Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

44. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NC_025136 (Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

45. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP044511 (Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
aaaaacgagaacagatcattaaatccagga	Protospacer
  *** ***** **************  **

46. spacer 4.70|3162478|32|AP019309|PILER-CR matches to NC_041883 (Gordonia phage Attis, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

47. spacer 4.70|3162478|32|AP019309|PILER-CR matches to MK801734 (Gordonia phage LordFarquaad, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

48. spacer 4.70|3162478|32|AP019309|PILER-CR matches to NC_031251 (Gordonia phage SoilAssassin, complete genome) position: , mismatch: 6, identity: 0.812

acatgacgcgtatctaagcacatcgcgctttg	CRISPR spacer
ccatgacgcgtatctaagcaccgcgctgttgg	Protospacer
 ********************  ***  ** *

49. spacer 4.76|3162876|30|AP019309|PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 6, identity: 0.8

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
ctacatattcaacaaaaaatgaaaacaata	Protospacer
  **************** * *****. **

50. spacer 4.78|3163008|30|AP019309|PILER-CR matches to KX833905 (Lactococcus phage PLg-TB25, complete genome) position: , mismatch: 6, identity: 0.8

taagattttttcaactcctttgaaatcctt	CRISPR spacer
gaagattttttcaattcctttggcagccgt	Protospacer
 *************.*******. * ** *

51. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

52. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

53. spacer 4.86|3163536|30|AP019309|PILER-CR matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

54. spacer 4.86|3163536|30|AP019309|PILER-CR matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

55. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

56. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

57. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP040905 (Enterococcus faecium strain N56454 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

58. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

59. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP050649 (Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

60. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP050651 (Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

61. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

62. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

63. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

64. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

65. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

66. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

67. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

68. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

69. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_LR134096 (Enterococcus faecium isolate E1334 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

70. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

71. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP040850 (Enterococcus faecium strain F17E0263 plasmid p_unnamned1, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

72. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

73. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

74. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

75. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

76. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NZ_MG674581 (Enterococcus faecium strain HL1 plasmid pHLSA, complete sequence) position: , mismatch: 6, identity: 0.8

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
cttctcttctttctctttttgtaattcctt	Protospacer
******.********* ******* *  *

77. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP014311 (Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
acagcgcttgcgaaaatttttaatatgatg	Protospacer
 ********** * **********.* .*

78. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to KU726251 (Enterobacteria phage SEGD1, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

79. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to MT679221 (Proteus phage 7, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

80. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to NC_027402 (Salmonella phage SPN3US, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

81. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to MT799840 (Salmonella phage JN03, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

82. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to LR535912 (XXX) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

83. spacer 4.14|3161685|30|AP019309|CRISPRCasFinder,CRT matches to MN582062 (Microviridae sp. ctGWf34, complete genome) position: , mismatch: 7, identity: 0.767

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cattaggacacatcttcttaagattgtcct	Protospacer
******  *************** .  * *

84. spacer 4.14|3161685|30|AP019309|CRISPRCasFinder,CRT matches to MN582053 (Microviridae sp. ctjWc39, complete genome) position: , mismatch: 7, identity: 0.767

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cattaggacacatcttcttaagattgtcct	Protospacer
******  *************** .  * *

85. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

86. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

87. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

88. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

89. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

90. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

91. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

92. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

93. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

94. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

95. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

96. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

97. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

98. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

99. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

100. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

101. spacer 4.29|3162677|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatccaggtgccgtttgcgtagcactga	CRISPR spacer
cagatccaggtgccggttgcgttgcacaac	Protospacer
. ************* ****** **** .

102. spacer 4.30|3162743|30|AP019309|CRISPRCasFinder,CRT matches to MN692984 (Marine virus AFVG_117M10, complete genome) position: , mismatch: 7, identity: 0.767

ttttataaagacttgagaagctgatatttg	CRISPR spacer
atttataaatactttagaagctgatgtaat	Protospacer
 ******** **** **********.*

103. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP054832 (Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
taatatattcaacaaaaattgaaaacagaa	Protospacer
 .*.**************** *****.  *

104. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to NZ_LR214994 (Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
cggcaagaccaacaaaaattcaaaaagcta	Protospacer
 *.** . .**************** ****

105. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to MN693565 (Marine virus AFVG_25M347, complete genome) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
gaacatattcaacaaatatttaaaatgaat	Protospacer
*.************** ***.****.*

106. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 7, identity: 0.767

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ggattctttttcaaatccttcgaaatcctt	Protospacer
 .*  .******** *****.*********

107. spacer 4.39|3163337|30|AP019309|CRISPRCasFinder,CRT matches to MN694088 (Marine virus AFVG_250M454, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

108. spacer 4.39|3163337|30|AP019309|CRISPRCasFinder,CRT matches to MN694007 (Marine virus AFVG_250M456, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

109. spacer 4.39|3163337|30|AP019309|CRISPRCasFinder,CRT matches to MN694027 (Marine virus AFVG_250M455, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

110. spacer 4.41|3163469|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgatgttgaagttatatgatttgagaga	CRISPR spacer
tatagggttgaagttatataatatgagagc	Protospacer
*.*.. *************.** ******

111. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
ctcaagtactttctctatttggaaatgatg	Protospacer
**.   . ************* ********

112. spacer 4.56|3161554|30|AP019309|PILER-CR matches to NZ_CP014311 (Burkholderia sp. PAMC 26561 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
acagcgcttgcgaaaatttttaatatgatg	Protospacer
 ********** * **********.* .*

113. spacer 4.56|3161554|30|AP019309|PILER-CR matches to KU726251 (Enterobacteria phage SEGD1, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

114. spacer 4.56|3161554|30|AP019309|PILER-CR matches to MT679221 (Proteus phage 7, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

115. spacer 4.56|3161554|30|AP019309|PILER-CR matches to NC_027402 (Salmonella phage SPN3US, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

116. spacer 4.56|3161554|30|AP019309|PILER-CR matches to MT799840 (Salmonella phage JN03, complete genome) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

117. spacer 4.56|3161554|30|AP019309|PILER-CR matches to LR535912 (XXX) position: , mismatch: 7, identity: 0.767

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
tgcacgcttgccattatttttaatggcttt	Protospacer
*  .********** ********** . **

118. spacer 4.58|3161686|30|AP019309|PILER-CR matches to MN582062 (Microviridae sp. ctGWf34, complete genome) position: , mismatch: 7, identity: 0.767

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cattaggacacatcttcttaagattgtcct	Protospacer
******  *************** .  * *

119. spacer 4.58|3161686|30|AP019309|PILER-CR matches to MN582053 (Microviridae sp. ctjWc39, complete genome) position: , mismatch: 7, identity: 0.767

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cattaggacacatcttcttaagattgtcct	Protospacer
******  *************** .  * *

120. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

121. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

122. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

123. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

124. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

125. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

126. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

127. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

128. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

129. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

130. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

131. spacer 4.64|3162082|30|AP019309|PILER-CR matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

132. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

133. spacer 4.64|3162082|30|AP019309|PILER-CR matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

134. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

135. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
tacaaatagaaacgatcattaaatccttcg	Protospacer
*  *** ***** *************.* .

136. spacer 4.73|3162678|30|AP019309|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatccaggtgccgtttgcgtagcactga	CRISPR spacer
cagatccaggtgccggttgcgttgcacaac	Protospacer
. ************* ****** **** .

137. spacer 4.74|3162744|30|AP019309|PILER-CR matches to MN692984 (Marine virus AFVG_117M10, complete genome) position: , mismatch: 7, identity: 0.767

ttttataaagacttgagaagctgatatttg	CRISPR spacer
atttataaatactttagaagctgatgtaat	Protospacer
 ******** **** **********.*

138. spacer 4.76|3162876|30|AP019309|PILER-CR matches to NZ_CP054832 (Staphylococcus saprophyticus strain UTI-045 plasmid pUTI-045-1, complete sequence) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
taatatattcaacaaaaattgaaaacagaa	Protospacer
 .*.**************** *****.  *

139. spacer 4.76|3162876|30|AP019309|PILER-CR matches to NZ_LR214994 (Mycoplasma hyopneumoniae strain NCTC10127 plasmid 3) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
cggcaagaccaacaaaaattcaaaaagcta	Protospacer
 *.** . .**************** ****

140. spacer 4.76|3162876|30|AP019309|PILER-CR matches to MN693565 (Marine virus AFVG_25M347, complete genome) position: , mismatch: 7, identity: 0.767

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
gaacatattcaacaaatatttaaaatgaat	Protospacer
*.************** ***.****.*

141. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 7, identity: 0.767

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ggattctttttcaaatccttcgaaatcctt	Protospacer
 .*  .******** *****.*********

142. spacer 4.83|3163338|30|AP019309|PILER-CR matches to MN694088 (Marine virus AFVG_250M454, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

143. spacer 4.83|3163338|30|AP019309|PILER-CR matches to MN694007 (Marine virus AFVG_250M456, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

144. spacer 4.83|3163338|30|AP019309|PILER-CR matches to MN694027 (Marine virus AFVG_250M455, complete genome) position: , mismatch: 7, identity: 0.767

-ccgtatgctggattaactgtctatgaagca	CRISPR spacer
gatgt-tgctggattaactggttatgaagat	Protospacer
  .** ************** .*******

145. spacer 4.85|3163470|30|AP019309|PILER-CR matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgatgttgaagttatatgatttgagaga	CRISPR spacer
tatagggttgaagttatataatatgagagc	Protospacer
*.*.. *************.** ******

146. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 7, identity: 0.767

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
ctcaagtactttctctatttggaaatgatg	Protospacer
**.   . ************* ********

147. spacer 4.8|3161289|30|AP019309|CRISPRCasFinder,CRT matches to AP013545 (Uncultured phage_MedDCM-OCT-S46-C10 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S46-C10) position: , mismatch: 8, identity: 0.733

ttgttatgacatggttcagcagttgcacca	CRISPR spacer
acaattggacatggtttaggagttgcacca	Protospacer
 .. *  *********.** **********

148. spacer 4.14|3161685|30|AP019309|CRISPRCasFinder,CRT matches to NC_027332 (Acinetobacter phage YMC13/03/R2096, complete genome) position: , mismatch: 8, identity: 0.733

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cgataacccacctcttcttaagaactcacc	Protospacer
*. **.***** **************   .

149. spacer 4.14|3161685|30|AP019309|CRISPRCasFinder,CRT matches to KY000079 (Acinetobacter phage AM24, complete genome) position: , mismatch: 8, identity: 0.733

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cgataacccacctcttcttaagaactcacc	Protospacer
*. **.***** **************   .

150. spacer 4.16|3161817|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 8, identity: 0.733

gaatcagctccgacagccaaagtatttctt	CRISPR spacer
ccgagagctccgacagccaaaatctttcct	Protospacer
  .  ****************.* ****.*

151. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to MH319745 (Marine virus AG-345-E15 Ga0172270_15 genomic sequence) position: , mismatch: 8, identity: 0.733

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
ctgcatattctacaaatattcaaaacgtat	Protospacer
  .******* ***** **********.

152. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to MN180251 (UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence) position: , mismatch: 8, identity: 0.733

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
agaaatattcaactaaaattcaaacataga	Protospacer
.** ********* **********     *

153. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
atccattttttcaactcctttctaatccca	Protospacer
    *****************  *****.

154. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY303941 (Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
tttatattttttaactcctttgacatcctc	Protospacer
*  .  *****.*********** *****.

155. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KU513859 (Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

156. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to MK134858 (Listeria monocytogenes plasmid pLM1686, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

157. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_HG813248 (Listeria monocytogenes R479a plasmid pLMR479a, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

158. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP013725 (Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

159. spacer 4.34|3163007|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
attcacttattcaactcctttaaaatccta	Protospacer
    *.** ************.*******

160. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883636 (Vibrio phage JSF1, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

161. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883637 (Vibrio phage JSF2, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

162. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY065147 (Vibrio phage JSF4, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

163. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883639 (Vibrio phage JSF14, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

164. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641348 (Vibrio phage ICP1_2006_D, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

165. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883634 (Vibrio phage JSF5, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

166. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641354 (Vibrio phage ICP1_2004_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

167. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641349 (Vibrio phage ICP1_2006_C, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

168. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883635 (Vibrio phage JSF6, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

169. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to MH310934 (Vibrio phage ICP1_2006_E, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

170. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641353 (Vibrio phage ICP1_2001_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

171. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641352 (Vibrio phage ICP1_2005_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

172. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883640 (Vibrio phage JSF17, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

173. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to MH310933 (Vibrio phage ICP1_2011_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

174. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to MN419153 (Vibrio phage ICP1_2017_F_Mathbaria, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

175. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641350 (Vibrio phage ICP1_2006_B, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

176. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to MN402506 (Vibrio phage VMJ710, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

177. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to HQ641351 (Vibrio phage ICP1_2006_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

178. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to MH310936 (Vibrio phage ICP1, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

179. spacer 4.36|3163139|30|AP019309|CRISPRCasFinder,CRT matches to KY883638 (Vibrio phage JSF13, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

180. spacer 4.40|3163403|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

181. spacer 4.40|3163403|30|AP019309|CRISPRCasFinder,CRT matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

182. spacer 4.40|3163403|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

183. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 8, identity: 0.733

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
aatctcctctatctctatttttaaatatca	Protospacer
  ******** ********* *****. ..

184. spacer 4.42|3163535|30|AP019309|CRISPRCasFinder,CRT matches to NC_015419 (Clostridium botulinum BKT015925 plasmid p5BKT015925, complete sequence) position: , mismatch: 8, identity: 0.733

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
actctgctatttctctatttgtaaagttta	Protospacer
 .*** ** ****************   *.

185. spacer 4.44|3163667|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP033463 (Brevibacillus laterosporus strain 1821L plasmid p1821L03, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcttaaagctttagaacccatgtcacta	CRISPR spacer
tcagttaaaactttagaacccatgttatct	Protospacer
 *. *****.***************.*..

186. spacer 4.46|3163799|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP023066 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence) position: , mismatch: 8, identity: 0.733

accgaacaggacacgacaggaacgacaaaa	CRISPR spacer
tcgacacaggagacgactggaacgacaagg	Protospacer
 * . ****** ***** **********..

187. spacer 4.52|3161290|30|AP019309|PILER-CR matches to AP013545 (Uncultured phage_MedDCM-OCT-S46-C10 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S46-C10) position: , mismatch: 8, identity: 0.733

ttgttatgacatggttcagcagttgcacca	CRISPR spacer
acaattggacatggtttaggagttgcacca	Protospacer
 .. *  *********.** **********

188. spacer 4.58|3161686|30|AP019309|PILER-CR matches to NC_027332 (Acinetobacter phage YMC13/03/R2096, complete genome) position: , mismatch: 8, identity: 0.733

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cgataacccacctcttcttaagaactcacc	Protospacer
*. **.***** **************   .

189. spacer 4.58|3161686|30|AP019309|PILER-CR matches to KY000079 (Acinetobacter phage AM24, complete genome) position: , mismatch: 8, identity: 0.733

cattagcccacatcttcttaagaactacgt	CRISPR spacer
cgataacccacctcttcttaagaactcacc	Protospacer
*. **.***** **************   .

190. spacer 4.60|3161818|30|AP019309|PILER-CR matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 8, identity: 0.733

gaatcagctccgacagccaaagtatttctt	CRISPR spacer
ccgagagctccgacagccaaaatctttcct	Protospacer
  .  ****************.* ****.*

191. spacer 4.76|3162876|30|AP019309|PILER-CR matches to MH319745 (Marine virus AG-345-E15 Ga0172270_15 genomic sequence) position: , mismatch: 8, identity: 0.733

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
ctgcatattctacaaatattcaaaacgtat	Protospacer
  .******* ***** **********.

192. spacer 4.76|3162876|30|AP019309|PILER-CR matches to MN180251 (UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence) position: , mismatch: 8, identity: 0.733

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
agaaatattcaactaaaattcaaacataga	Protospacer
.** ********* **********     *

193. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
atccattttttcaactcctttctaatccca	Protospacer
    *****************  *****.

194. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_KY303941 (Enterococcus faecalis strain 3 plasmid pGTC3, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
tttatattttttaactcctttgacatcctc	Protospacer
*  .  *****.*********** *****.

195. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_KU513859 (Listeria monocytogenes strain IZSAM_Lm_15_17439_A144 plasmid pLmA144, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

196. spacer 4.78|3163008|30|AP019309|PILER-CR matches to MK134858 (Listeria monocytogenes plasmid pLM1686, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

197. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_HG813248 (Listeria monocytogenes R479a plasmid pLMR479a, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

198. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_CP013725 (Listeria monocytogenes strain Lm N1546 plasmid pLmN1546, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
ccattttttttcaactccattgaaatacca	Protospacer
. *  ************* ******* *.

199. spacer 4.78|3163008|30|AP019309|PILER-CR matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.733

taagattttttcaactcctttgaaatcctt	CRISPR spacer
attcacttattcaactcctttaaaatccta	Protospacer
    *.** ************.*******

200. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883636 (Vibrio phage JSF1, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

201. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883637 (Vibrio phage JSF2, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

202. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY065147 (Vibrio phage JSF4, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

203. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883639 (Vibrio phage JSF14, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

204. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641348 (Vibrio phage ICP1_2006_D, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

205. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883634 (Vibrio phage JSF5, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

206. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641354 (Vibrio phage ICP1_2004_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

207. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641349 (Vibrio phage ICP1_2006_C, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

208. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883635 (Vibrio phage JSF6, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

209. spacer 4.80|3163140|30|AP019309|PILER-CR matches to MH310934 (Vibrio phage ICP1_2006_E, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

210. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641353 (Vibrio phage ICP1_2001_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

211. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641352 (Vibrio phage ICP1_2005_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

212. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883640 (Vibrio phage JSF17, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

213. spacer 4.80|3163140|30|AP019309|PILER-CR matches to MH310933 (Vibrio phage ICP1_2011_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

214. spacer 4.80|3163140|30|AP019309|PILER-CR matches to MN419153 (Vibrio phage ICP1_2017_F_Mathbaria, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

215. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641350 (Vibrio phage ICP1_2006_B, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

216. spacer 4.80|3163140|30|AP019309|PILER-CR matches to MN402506 (Vibrio phage VMJ710, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

217. spacer 4.80|3163140|30|AP019309|PILER-CR matches to HQ641351 (Vibrio phage ICP1_2006_A, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

218. spacer 4.80|3163140|30|AP019309|PILER-CR matches to MH310936 (Vibrio phage ICP1, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

219. spacer 4.80|3163140|30|AP019309|PILER-CR matches to KY883638 (Vibrio phage JSF13, complete genome) position: , mismatch: 8, identity: 0.733

agatcatatccttctaagattgcaatcata	CRISPR spacer
acaaacaatccttttaagattgcaatcact	Protospacer
* *    ******.**************.

220. spacer 4.84|3163404|30|AP019309|PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

221. spacer 4.84|3163404|30|AP019309|PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

222. spacer 4.84|3163404|30|AP019309|PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 8, identity: 0.733

acgtcatatgataatcttattatgctttat	CRISPR spacer
aatggatatgataatcttattatacattca	Protospacer
*    ******************.* **

223. spacer 4.86|3163536|30|AP019309|PILER-CR matches to KT997868 (Uncultured Mediterranean phage uvDeep-CGR2-KM24-C165, complete genome) position: , mismatch: 8, identity: 0.733

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
aatctcctctatctctatttttaaatatca	Protospacer
  ******** ********* *****. ..

224. spacer 4.86|3163536|30|AP019309|PILER-CR matches to NC_015419 (Clostridium botulinum BKT015925 plasmid p5BKT015925, complete sequence) position: , mismatch: 8, identity: 0.733

cttctcctctttctctatttgtaaatgatg	CRISPR spacer
actctgctatttctctatttgtaaagttta	Protospacer
 .*** ** ****************   *.

225. spacer 4.88|3163668|30|AP019309|PILER-CR matches to NZ_CP033463 (Brevibacillus laterosporus strain 1821L plasmid p1821L03, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcttaaagctttagaacccatgtcacta	CRISPR spacer
tcagttaaaactttagaacccatgttatct	Protospacer
 *. *****.***************.*..

226. spacer 4.90|3163800|30|AP019309|PILER-CR matches to NZ_CP023066 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence) position: , mismatch: 8, identity: 0.733

accgaacaggacacgacaggaacgacaaaa	CRISPR spacer
tcgacacaggagacgactggaacgacaagg	Protospacer
 * . ****** ***** **********..

227. spacer 4.12|3161553|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP050761 (Salmonella enterica subsp. enterica serovar Indiana strain SI170 plasmid pSI170-1, complete sequence) position: , mismatch: 9, identity: 0.7

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
catgcgcttgccataattattaattaaaat	Protospacer
.  *************** *****   . *

228. spacer 4.20|3162081|30|AP019309|CRISPRCasFinder,CRT matches to NC_003276 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence) position: , mismatch: 9, identity: 0.7

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
gataacgaaaaaagatcattaaatccaatt	Protospacer
   ** **.*****************

229. spacer 4.28|3162611|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 9, identity: 0.7

tttttgtccggctgcattttgccgtctttt	CRISPR spacer
tcggccagcggctgcagtttgccgtctttg	Protospacer
*.  .   ******** ************

230. spacer 4.32|3162875|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
attcatattcaataaaaattcaaaagaaat	Protospacer
.  *********.************ .

231. spacer 4.33|3162941|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.7

tcggtaagatgaaaaatgcaagtgggctcg	CRISPR spacer
tccgtaagatgaaaaatgcgagtttttagt	Protospacer
** ****************.***   .

232. spacer 4.35|3163073|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 9, identity: 0.7

ctagacaagaatatcatgtatgcagattta	CRISPR spacer
ccgcgtgagaatagcatgtatgcagattgc	Protospacer
*.. ...****** **************

233. spacer 4.37|3163205|30|AP019309|CRISPRCasFinder,CRT matches to MN013077 (Klebsiella phage vB_KaeM_KaOmega, complete genome) position: , mismatch: 9, identity: 0.7

cacccataggctcatcaataacctcgattg	CRISPR spacer
cacccatagactcatcaataagccacggaa	Protospacer
*********.*********** *.  .  .

234. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

235. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

236. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

237. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

238. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

239. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

240. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

241. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

242. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

243. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

244. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

245. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

246. spacer 4.43|3163601|30|AP019309|CRISPRCasFinder,CRT matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

247. spacer 4.56|3161554|30|AP019309|PILER-CR matches to NZ_CP050761 (Salmonella enterica subsp. enterica serovar Indiana strain SI170 plasmid pSI170-1, complete sequence) position: , mismatch: 9, identity: 0.7

tcagcgcttgccataatttttaatgttgtt	CRISPR spacer
catgcgcttgccataattattaattaaaat	Protospacer
.  *************** *****   . *

248. spacer 4.64|3162082|30|AP019309|PILER-CR matches to NC_003276 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence) position: , mismatch: 9, identity: 0.7

tcaaaagagaaaagatcattaaatccctga	CRISPR spacer
gataacgaaaaaagatcattaaatccaatt	Protospacer
   ** **.*****************

249. spacer 4.72|3162612|30|AP019309|PILER-CR matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 9, identity: 0.7

tttttgtccggctgcattttgccgtctttt	CRISPR spacer
tcggccagcggctgcagtttgccgtctttg	Protospacer
*.  .   ******** ************

250. spacer 4.76|3162876|30|AP019309|PILER-CR matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacatattcaacaaaaattcaaaacgcta	CRISPR spacer
attcatattcaataaaaattcaaaagaaat	Protospacer
.  *********.************ .

251. spacer 4.77|3162942|30|AP019309|PILER-CR matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.7

tcggtaagatgaaaaatgcaagtgggctcg	CRISPR spacer
tccgtaagatgaaaaatgcgagtttttagt	Protospacer
** ****************.***   .

252. spacer 4.79|3163074|30|AP019309|PILER-CR matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 9, identity: 0.7

ctagacaagaatatcatgtatgcagattta	CRISPR spacer
ccgcgtgagaatagcatgtatgcagattgc	Protospacer
*.. ...****** **************

253. spacer 4.81|3163206|30|AP019309|PILER-CR matches to MN013077 (Klebsiella phage vB_KaeM_KaOmega, complete genome) position: , mismatch: 9, identity: 0.7

cacccataggctcatcaataacctcgattg	CRISPR spacer
cacccatagactcatcaataagccacggaa	Protospacer
*********.*********** *.  .  .

254. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_CP030831 (Neorhizobium sp. NCHU2750 plasmid pTiNCHU2750, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

255. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MK439382 (Agrobacterium tumefaciens strain CFBP2178 plasmid pTiCFBP2178, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

256. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MK439383 (Agrobacterium tumefaciens strain CFBP1935 plasmid pTiCFBP1935, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

257. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MK318986 (Agrobacterium rhizogenes strain C6.5 plasmid pTiC6.5, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

258. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MK439384 (Agrobacterium tumefaciens strain Kerr108 plasmid pTiKerr108, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

259. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MK439381 (Agrobacterium tumefaciens strain Sule1 plasmid pTiSule1, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

260. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_MF511177 (Agrobacterium rhizogenes strain C5.7 plasmid pTiC5.7, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

261. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000052 (Agrobacterium tumefaciens strain CFBP7000 plasmid pTi_CFBP7000, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

262. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000049 (Agrobacterium rhizogenes strain CFBP4423 plasmid pTi_CFBP4423, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

263. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000055 (Agrobacterium rubi strain Tun159 plasmid pTi_Tun159, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

264. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000048 (Agrobacterium rhizogenes strain CFBP2746 plasmid pTi_CFBP2746, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

265. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000053 (Agrobacterium genomosp. 1 strain DC12-001 plasmid pTi_DC12-001, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

266. spacer 4.87|3163602|30|AP019309|PILER-CR matches to NZ_KY000054 (Agrobacterium tumefaciens strain Tun154 plasmid pTi_Tun154, complete sequence) position: , mismatch: 9, identity: 0.7

taaccctgtaacgatatgaccgccaataga	CRISPR spacer
cgcccctgtatcgatatgaccgtcaaagcc	Protospacer
.. ******* ***********.*** .

267. spacer 1.3|112139|35|AP019309|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 10, identity: 0.714

acctacaatttatatttaattgaaagctgttttgc	CRISPR spacer
taaaacaagttatattttattgaaagctgctgtaa	Protospacer
    **** ******** ***********.* *.

268. spacer 1.3|112139|35|AP019309|PILER-CR,CRISPRCasFinder,CRT matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 10, identity: 0.714

acctacaatttatatttaattgaaagctgttttgc	CRISPR spacer
taaaacaagttatattttattgaaagctgctgtaa	Protospacer
    **** ******** ***********.* *.

269. spacer 1.3|112139|35|AP019309|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 10, identity: 0.714

acctacaatttatatttaattgaaagctgttttgc	CRISPR spacer
taaaacaagttatattttattgaaagctgctgtaa	Protospacer
    **** ******** ***********.* *.

270. spacer 1.8|112478|34|AP019309|PILER-CR,CRISPRCasFinder,CRT matches to MN434095 (Klebsiella pneumoniae phage JIPh_Kp122, complete genome) position: , mismatch: 10, identity: 0.706

gcgtctgcctttagtatttgcaatgtcttctttg	CRISPR spacer
tcgtccgcctttagtattttcaatgttaagagta	Protospacer
 ****.************* ******.     *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

169374 : 208861

Lactococcus_phage(50.0%)

integrase,transposase

attL 175457:175516|attR 215383:219070

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH25237.1\|169374_170760_-\|transposase	transposase	NA	NA	NA	NA
BBH25238.1\|171055_172636_-	hypothetical protein	NA	NA	NA	NA
BBH25239.1\|172650_173013_-	hypothetical protein	NA	NA	NA	NA
BBH25240.1\|173504_175085_-	hypothetical protein	NA	NA	NA	NA
BBH25241.1\|175099_175447_-	hypothetical protein	NA	NA	NA	NA
175457:175516	attL	NA	NA	NA	NA
BBH25242.1\|175887_177786_-\|transposase	transposase	NA	NA	NA	NA
BBH25243.1\|177796_178165_-	hypothetical protein	NA	NA	NA	NA
BBH25244.1\|178298_178637_-\|transposase	transposase	NA	NA	NA	NA
BBH25245.1\|178629_179052_-	hypothetical protein	NA	NA	NA	NA
BBH25246.1\|179532_179928_+	hypothetical protein	NA	NA	NA	NA
BBH25247.1\|180074_181277_+	threonine ammonia-lyase	NA	NA	NA	NA
BBH25248.1\|181486_182203_+	hypothetical protein	NA	NA	NA	NA
BBH25249.1\|182216_182930_+	hypothetical protein	NA	NA	NA	NA
BBH25250.1\|182983_183262_+	hypothetical protein	NA	NA	NA	NA
BBH25251.1\|183499_184579_+	carbamoyl-phosphate synthase small chain	NA	NA	NA	NA
BBH25252.1\|184571_187772_+	carbamoyl-phosphate synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
BBH25253.1\|187791_187959_+	hypothetical protein	NA	NA	NA	NA
BBH25254.1\|188019_188622_+	hypothetical protein	NA	NA	NA	NA
BBH25255.1\|188780_189329_+	membrane protein	A0A1X9IGG1	Lactococcus_phage	1.1e-11	28.7
BBH25256.1\|189390_191079_+	hypothetical protein	NA	NA	NA	NA
BBH25257.1\|191075_192461_-	GntR family transcriptional regulator	NA	NA	NA	NA
BBH25258.1\|192559_193411_+	pyridoxal kinase	NA	NA	NA	NA
BBH25259.1\|193370_194327_-	hypothetical protein	NA	NA	NA	NA
BBH25260.1\|194423_195071_+	YggS family pyridoxal phosphate enzyme	NA	NA	NA	NA
BBH25261.1\|195233_195428_+	hypothetical protein	NA	NA	NA	NA
BBH25262.1\|195501_199731_+	2-hydroxyglutaryl-CoA dehydratase	NA	NA	NA	NA
BBH25263.1\|199731_200184_-	hypothetical protein	NA	NA	NA	NA
BBH25264.1\|200209_202393_-	hypothetical protein	A0A127AWB9	Bacillus_phage	5.5e-09	29.7
BBH25265.1\|202788_202980_-	hypothetical protein	NA	NA	NA	NA
BBH25266.1\|203064_203406_+	hypothetical protein	NA	NA	NA	NA
BBH25267.1\|203389_203608_+	hypothetical protein	NA	NA	NA	NA
BBH25268.1\|203997_204540_+	hypothetical protein	NA	NA	NA	NA
BBH25269.1\|204905_205922_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
BBH25270.1\|205987_207106_+\|transposase	IS110 family transposase	NA	NA	NA	NA
BBH25271.1\|207640_208861_+\|integrase	integrase	NA	NA	NA	NA
215383:219070	attR	NA	NA	NA	NA

DBSCAN-SWA_2

566641 : 572735

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH25597.1\|566641_567427_+	3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	1.5e-17	32.7
BBH25598.1\|567419_568184_+	metal-dependent phosphohydrolase	NA	NA	NA	NA
BBH25599.1\|568343_568745_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	6.3e-12	31.9
BBH25600.1\|568734_569388_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA
BBH25601.1\|569389_569950_+	GTP cyclohydrolase 1	S4U0J3	uncultured_phage	6.2e-50	58.1
BBH25602.1\|569942_570629_+	7-cyano-7-deazaguanine synthase	A0A1U9WRB5	Streptococcus_virus	1.9e-56	50.0
BBH25603.1\|570632_571106_+	NADPH-dependent 7-cyano-7-deazaguanine reductase	E7DN65	Pneumococcus_phage	1.7e-45	70.2
BBH25604.1\|571156_571507_+	hypothetical protein	NA	NA	NA	NA
BBH25605.1\|571733_572735_+	DNA/RNA helicase	A0A1X9I5S6	Streptococcus_phage	1.6e-43	34.8

DBSCAN-SWA_3

1183814 : 1231271

uncultured_virus(13.33%)

integrase,transposase,protease

attL 1225094:1225121|attR 1234621:1234648

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH26177.1\|1183814_1184651_+\|protease	protease PrsW	NA	NA	NA	NA
BBH26178.1\|1184656_1185331_+	hypothetical protein	NA	NA	NA	NA
BBH26179.1\|1185412_1186378_+	L-asparaginase 2	NA	NA	NA	NA
BBH26180.1\|1186637_1187336_+	hypothetical protein	NA	NA	NA	NA
BBH26181.1\|1187325_1188063_+	peptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-35	40.4
BBH26182.1\|1188076_1188829_+	hypothetical protein	NA	NA	NA	NA
BBH26183.1\|1188943_1190827_+	hypothetical protein	NA	NA	NA	NA
BBH26184.1\|1190873_1191299_+	hypothetical protein	NA	NA	NA	NA
BBH26185.1\|1191481_1192663_+	hypothetical protein	A0A2I6AZV9	Macacine_betaherpesvirus	6.2e-15	30.8
BBH26186.1\|1192887_1193217_-	monooxygenase	NA	NA	NA	NA
BBH26187.1\|1193485_1194001_-	membrane protein	NA	NA	NA	NA
BBH26188.1\|1194165_1194666_+	flavodoxin family protein	NA	NA	NA	NA
BBH26189.1\|1194746_1196252_+	glycerol kinase	NA	NA	NA	NA
BBH26190.1\|1196385_1197552_+	hypothetical protein	NA	NA	NA	NA
BBH26191.1\|1197591_1198527_+	restriction endonuclease	NA	NA	NA	NA
BBH26192.1\|1198590_1201140_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.3e-99	42.6
BBH26193.1\|1201141_1202401_+	type I restriction-modification protein subunit S	NA	NA	NA	NA
BBH26194.1\|1202543_1203182_+	hypothetical protein	NA	NA	NA	NA
BBH26195.1\|1203475_1206760_+	DEAD/DEAH box helicase	NA	NA	NA	NA
BBH26196.1\|1206814_1207738_+\|integrase	site-specific integrase	A8ATM2	Listeria_phage	5.6e-88	53.1
BBH26197.1\|1207878_1208445_+	hypothetical protein	NA	NA	NA	NA
BBH26198.1\|1208601_1209468_+	hypothetical protein	A0A218MNE0	uncultured_virus	4.3e-42	38.3
BBH26199.1\|1209425_1209713_+	hypothetical protein	A0A218MNE0	uncultured_virus	4.8e-22	57.4
BBH26200.1\|1209830_1210250_+	hypothetical protein	NA	NA	NA	NA
BBH26201.1\|1210260_1210974_+	hypothetical protein	NA	NA	NA	NA
BBH26202.1\|1210984_1211563_+	hypothetical protein	NA	NA	NA	NA
BBH26203.1\|1211668_1211929_+	hypothetical protein	NA	NA	NA	NA
BBH26204.1\|1211897_1212293_+	hypothetical protein	NA	NA	NA	NA
BBH26205.1\|1212366_1212546_+	hypothetical protein	NA	NA	NA	NA
BBH26206.1\|1212588_1214259_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
BBH26207.1\|1214270_1214756_+	N5-carboxyaminoimidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.5e-23	45.2
BBH26208.1\|1214775_1215486_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	G8EYA2	Synechococcus_phage	1.8e-46	43.5
BBH26209.1\|1215495_1216521_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.0e-66	43.2
BBH26210.1\|1216514_1217108_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-19	34.1
BBH26211.1\|1217104_1217686_+	hypothetical protein	E3SNU8	Prochlorococcus_phage	6.0e-40	46.0
BBH26212.1\|1217696_1218950_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
BBH26213.1\|1218964_1222711_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.0e-31	27.9
BBH26214.1\|1222722_1224105_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.0e-103	42.4
1225094:1225121	attL	NA	NA	NA	NA
BBH26215.1\|1225233_1225887_+	hypothetical protein	NA	NA	NA	NA
BBH26216.1\|1225895_1226225_+	hypothetical protein	NA	NA	NA	NA
BBH26217.1\|1226208_1227165_+\|integrase	integrase	NA	NA	NA	NA
BBH26218.1\|1227151_1228147_+\|integrase	integrase	S5M872	Bacillus_phage	2.3e-15	26.0
BBH26219.1\|1228224_1228689_+	hypothetical protein	NA	NA	NA	NA
BBH26220.1\|1228685_1229048_+\|transposase	transposase	NA	NA	NA	NA
BBH26221.1\|1229224_1230229_+	hypothetical protein	NA	NA	NA	NA
BBH26222.1\|1230257_1231271_-\|integrase	integrase	S5W9T9	Leptospira_phage	3.8e-13	29.8
1234621:1234648	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1519377 : 1528102

Streptococcus_phage(77.78%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH26468.1\|1519377_1520508_+	23S rRNA (uracil-C(5))-methyltransferase RlmCD	A0A2K5B251	Erysipelothrix_phage	3.2e-61	37.3
BBH26469.1\|1520816_1521443_+	hypothetical protein	NA	NA	NA	NA
BBH26470.1\|1521423_1522158_+	methyltransferase	A0A1X9I6N4	Streptococcus_phage	7.7e-133	93.4
BBH26471.1\|1522190_1523099_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	E4ZFP8	Streptococcus_phage	2.8e-177	100.0
BBH26472.1\|1523095_1523638_+	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	8.9e-94	100.0
BBH26473.1\|1523730_1524525_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	1.1e-153	99.6
BBH26474.1\|1524800_1525373_+	transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	5.5e-102	99.5
BBH26475.1\|1525477_1525753_+	hypothetical protein	E4ZFP4	Streptococcus_phage	6.6e-45	100.0
BBH26476.1\|1525863_1526523_+	hypothetical protein	A0A1B0RXM8	Streptococcus_phage	3.1e-125	100.0
BBH26477.1\|1526896_1527481_+	hypothetical protein	NA	NA	NA	NA
BBH26478.1\|1527607_1528102_+	hypothetical protein	A0A2K5B286	Erysipelothrix_phage	7.9e-49	55.5

DBSCAN-SWA_5

1950052 : 2016061

Bacillus_phage(22.22%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH26910.1\|1950052_1950661_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
BBH26911.1\|1950650_1951643_-	hypothetical protein	NA	NA	NA	NA
BBH26912.1\|1951747_1954402_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.1e-83	39.6
BBH26913.1\|1954562_1956131_-	DEAD-box ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.8e-62	38.0
BBH26914.1\|1956419_1958000_-	hypothetical protein	NA	NA	NA	NA
BBH26915.1\|1958014_1958377_-	hypothetical protein	NA	NA	NA	NA
BBH26916.1\|1958636_1959971_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	5.0e-29	25.8
BBH26917.1\|1960068_1961643_-	hypothetical protein	NA	NA	NA	NA
BBH26918.1\|1961679_1962006_-	hypothetical protein	NA	NA	NA	NA
BBH26919.1\|1962148_1962364_-	hypothetical protein	NA	NA	NA	NA
BBH26920.1\|1962498_1963515_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
BBH26921.1\|1963500_1963860_-	membrane protein	NA	NA	NA	NA
BBH26922.1\|1964134_1966513_+	hypothetical protein	NA	NA	NA	NA
BBH26923.1\|1966556_1967195_-	membrane protein	NA	NA	NA	NA
BBH26924.1\|1967239_1967683_-	hypothetical protein	A0A249XX86	Proteus_phage	5.1e-07	28.8
BBH26925.1\|1967684_1969310_-	hypothetical protein	NA	NA	NA	NA
BBH26926.1\|1969523_1970522_-	peptidase	NA	NA	NA	NA
BBH26927.1\|1970657_1972280_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
BBH26928.1\|1972280_1973255_-	hypothetical protein	NA	NA	NA	NA
BBH26929.1\|1973256_1974249_-	glutathione-dependent reductase	NA	NA	NA	NA
BBH26930.1\|1974251_1974686_-	acetyltransferase	NA	NA	NA	NA
BBH26931.1\|1974814_1975840_-	dihydrodipicolinate reductase	NA	NA	NA	NA
BBH26932.1\|1975888_1976737_-	transcriptional regulator	NA	NA	NA	NA
BBH26933.1\|1976977_1978363_+\|transposase	transposase	NA	NA	NA	NA
BBH26934.1\|1978651_1979206_-	hypothetical protein	NA	NA	NA	NA
BBH26935.1\|1979209_1979560_-	hypothetical protein	A0A060ABA3	Staphylococcus_phage	2.3e-10	31.3
BBH26936.1\|1979661_1980285_-	hypothetical protein	NA	NA	NA	NA
BBH26937.1\|1980993_1981221_+	hypothetical protein	NA	NA	NA	NA
BBH26938.1\|1981355_1982234_+	hypothetical protein	NA	NA	NA	NA
BBH26939.1\|1982629_1984273_+	hypothetical protein	NA	NA	NA	NA
BBH26940.1\|1984269_1985211_+	hypothetical protein	NA	NA	NA	NA
BBH26941.1\|1985203_1986214_+	tyrosine recombinase XerD	U5Q0B8	Bacillus_phage	2.7e-11	25.1
BBH26942.1\|1986562_1986874_+	hypothetical protein	NA	NA	NA	NA
BBH26943.1\|1986891_1987317_+	hypothetical protein	NA	NA	NA	NA
BBH26944.1\|1987436_1988996_+	hypothetical protein	NA	NA	NA	NA
BBH26945.1\|1989088_1989460_+	hypothetical protein	NA	NA	NA	NA
BBH26946.1\|1989523_1989709_+	hypothetical protein	NA	NA	NA	NA
BBH26947.1\|1989804_1990116_+	hypothetical protein	NA	NA	NA	NA
BBH26948.1\|1990256_1991474_-	group II intron reverse transcriptase/maturase	A0A0C5K882	ANMV-1_virus	6.8e-17	26.6
BBH26949.1\|1991947_1993846_-\|transposase	transposase	NA	NA	NA	NA
BBH26950.1\|1993856_1994225_-	hypothetical protein	NA	NA	NA	NA
BBH26951.1\|1994358_1994697_-\|transposase	transposase	NA	NA	NA	NA
BBH26952.1\|1994689_1995112_-	hypothetical protein	NA	NA	NA	NA
BBH26953.1\|1996083_1996809_-	hypothetical protein	NA	NA	NA	NA
BBH26954.1\|1997119_1998304_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	4.6e-18	23.1
BBH26955.1\|1998649_1998826_-	hypothetical protein	NA	NA	NA	NA
BBH26956.1\|1998845_1999079_-	hypothetical protein	NA	NA	NA	NA
BBH26957.1\|1999203_1999743_-	hypothetical protein	NA	NA	NA	NA
BBH26958.1\|1999753_2000590_-	hypothetical protein	NA	NA	NA	NA
BBH26959.1\|2000606_2002256_-	hypothetical protein	NA	NA	NA	NA
BBH26960.1\|2002316_2002898_-	hypothetical protein	NA	NA	NA	NA
BBH26961.1\|2002982_2005262_-	ATP-dependent helicase	NA	NA	NA	NA
BBH26962.1\|2005273_2006587_-	biotin carboxylase	NA	NA	NA	NA
BBH26963.1\|2006602_2009218_-	hypothetical protein	NA	NA	NA	NA
BBH26964.1\|2009279_2010518_-	dicarboxylate:amino acid:cation symporter DAACS family protein	NA	NA	NA	NA
BBH26965.1\|2010867_2011977_-	lipoprotein	NA	NA	NA	NA
BBH26966.1\|2011973_2012906_-	phosphate starvation protein PhoH	L7TP00	Rhizobium_phage	1.1e-46	48.3
BBH26967.1\|2013039_2013225_-	30S ribosomal protein S21	NA	NA	NA	NA
BBH26968.1\|2014476_2014686_+	hypothetical protein	NA	NA	NA	NA
BBH26969.1\|2014669_2016061_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2324315 : 2332766

Indivirus(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBH27258.1\|2324315_2325218_-	glycosyl transferase	A0A1V0SAH6	Catovirus	2.0e-05	29.8
BBH27259.1\|2325268_2325664_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	2.6e-18	40.0
BBH27260.1\|2325766_2326585_-\|holin	LPS cholinephosphotransferase	A0A1V0SD50	Indivirus	2.3e-08	53.8
BBH27261.1\|2326581_2327499_-	LicD family protein	A0A1V0SD50	Indivirus	1.1e-08	39.5
BBH27262.1\|2327513_2328620_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.7e-152	69.6
BBH27263.1\|2328632_2329409_-	glycosyl transferase	NA	NA	NA	NA
BBH27264.1\|2329408_2330803_-	undecaprenyl-phosphate galactose phosphotransferase WbaP	NA	NA	NA	NA
BBH27265.1\|2330987_2332766_-	hypothetical protein	A0A1X9I5X1	Streptococcus_phage	7.8e-46	29.8

DBSCAN-SWA_7

2402621 : 2445567

Catovirus(50.0%)

integrase,transposase,holin

attL 2392796:2392820|attR 2421305:2421329

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2392796:2392820	attL	NA	NA	NA	NA
BBH27312.1\|2402621_2403647_-\|integrase	integrase	S5W9T9	Leptospira_phage	1.1e-12	31.4
BBH27313.1\|2403621_2404611_-	hypothetical protein	NA	NA	NA	NA
BBH27314.1\|2404594_2405509_-	hypothetical protein	NA	NA	NA	NA
BBH27315.1\|2406692_2407667_+	hypothetical protein	NA	NA	NA	NA
BBH27316.1\|2407729_2407921_+	hypothetical protein	NA	NA	NA	NA
BBH27317.1\|2407987_2408659_+	hypothetical protein	NA	NA	NA	NA
BBH27318.1\|2408940_2411493_-	hypothetical protein	NA	NA	NA	NA
BBH27319.1\|2411763_2413584_+\|transposase	IS4 family transposase	NA	NA	NA	NA
BBH27320.1\|2413733_2413898_-	hypothetical protein	NA	NA	NA	NA
BBH27321.1\|2413927_2415487_-	hypothetical protein	NA	NA	NA	NA
BBH27322.1\|2415715_2415997_-	hypothetical protein	NA	NA	NA	NA
BBH27323.1\|2416036_2416621_-	hypothetical protein	NA	NA	NA	NA
BBH27324.1\|2416780_2419486_-	hypothetical protein	NA	NA	NA	NA
BBH27325.1\|2419912_2421670_-	hypothetical protein	NA	NA	NA	NA
2421305:2421329	attR	NA	NA	NA	NA
BBH27326.1\|2421746_2423480_-	hypothetical protein	NA	NA	NA	NA
BBH27327.1\|2423545_2425006_-	polysaccharide biosynthesis protein MviN	NA	NA	NA	NA
BBH27328.1\|2425067_2427056_-	hypothetical protein	NA	NA	NA	NA
BBH27329.1\|2427070_2428531_-	heteropolysaccharide repeat-containing protein	NA	NA	NA	NA
BBH27330.1\|2428563_2430546_-	hypothetical protein	NA	NA	NA	NA
BBH27331.1\|2430578_2431913_-	hypothetical protein	NA	NA	NA	NA
BBH27332.1\|2431902_2432823_-	hypothetical protein	NA	NA	NA	NA
BBH27333.1\|2433110_2434034_-	glycosyl transferase	A0A1V0SAH6	Catovirus	7.9e-10	27.1
BBH27334.1\|2434026_2435148_-	hypothetical protein	NA	NA	NA	NA
BBH27335.1\|2435144_2436914_-	hypothetical protein	NA	NA	NA	NA
BBH27336.1\|2436923_2437427_-	hypothetical protein	NA	NA	NA	NA
BBH27337.1\|2437430_2438255_-\|holin	LPS cholinephosphotransferase	A0A1V0SD50	Indivirus	2.4e-05	42.3
BBH27338.1\|2438275_2439721_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
BBH27339.1\|2439761_2441639_-	UDP-N-acetylglucosamine 4,6-dehydratase	A0A1V0SAI8	Catovirus	1.6e-28	32.6
BBH27340.1\|2441994_2443755_+\|holin	choline kinase	NA	NA	NA	NA
BBH27341.1\|2443747_2444620_+\|holin	choline-phosphate cytidylyltransferase	NA	NA	NA	NA
BBH27342.1\|2444622_2445567_+\|holin	choline transporter	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP019309

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection