CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034249	Klebsiella pneumoniae strain KP18-29 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	0	1	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034249_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034249_2

4497781-4497875

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034249_2

>merge|CP034249|2|4497781-4497875|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP034249|2|2|4497781-4497875|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP034249.1\|AZK57549.1\|4496327_4497692_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP034249.1\|AZK57553.1\|4501433_4503782_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP034249.1\|AZK57545.1\|4491955_4494862_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP034249.1\|AZK57558.1\|4507320_4508169_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP034249.1\|AZK57541.1\|4485179_4486889_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP034249.1\|AZK57555.1\|4505128_4506118_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP034249.1\|AZK57542.1\|4486899_4488402_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP034249.1\|AZK57554.1\|4503836_4505123_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP034249.1\|AZK57548.1\|4496110_4496299_+\|hypothetical-protein	unknown	unknown	unknown
CP034249.1\|AZK57557.1\|4506938_4507316_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP034249.1\|AZK57552.1\|4500362_4501190_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP034249.1\|AZK57551.1\|4499631_4500330_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP034249.1\|AZK57544.1\|4489410_4491768_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP034249.1\|AZK57550.1\|4498016_4499642_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP034249.1\|AZK57540.1\|4483996_4484842_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP034249.1\|AZK57546.1\|4494874_4495534_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP034249.1\|AZK57547.1\|4495608_4496148_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP034249.1\|AZK57543.1\|4488539_4489235_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP034249.1\|AZK57556.1\|4506114_4506936_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP034249.1\|AZK57559.1\|4508121_4508325_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034249.1\|AZK57549.1\|4496327_4497692_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP034249.1\|AZK57553.1\|4501433_4503782_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP034249.1\|AZK57551.1\|4499631_4500330_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP034249.1\|AZK57558.1\|4507320_4508169_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP034249.1\|AZK57541.1\|4485179_4486889_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP034249.1\|AZK57555.1\|4505128_4506118_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP034249.1\|AZK57545.1\|4491955_4494862_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP034249.1\|AZK57554.1\|4503836_4505123_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP034249.1\|AZK57542.1\|4486899_4488402_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP034249.1\|AZK57557.1\|4506938_4507316_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP034249.1\|AZK57552.1\|4500362_4501190_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP034249.1\|AZK57544.1\|4489410_4491768_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP034249.1\|AZK57550.1\|4498016_4499642_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP034249.1\|AZK57540.1\|4483996_4484842_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP034249.1\|AZK57546.1\|4494874_4495534_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP034249.1\|AZK57547.1\|4495608_4496148_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP034249.1\|AZK57543.1\|4488539_4489235_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP034249.1\|AZK57556.1\|4506114_4506936_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147

>CP034249.1|AZK57549.1|4496327_4497692_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP034249.1|AZK57548.1|4496110_4496299_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP034249.1|AZK57547.1|4495608_4496148_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP034249.1|AZK57546.1|4494874_4495534_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP034249.1|AZK57545.1|4491955_4494862_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP034249.1|AZK57544.1|4489410_4491768_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP034249.1|AZK57543.1|4488539_4489235_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP034249.1|AZK57542.1|4486899_4488402_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP034249.1|AZK57541.1|4485179_4486889_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP034249.1|AZK57540.1|4483996_4484842_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP034249.1|AZK57550.1|4498016_4499642_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP034249.1|AZK57551.1|4499631_4500330_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP034249.1|AZK57552.1|4500362_4501190_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP034249.1|AZK57553.1|4501433_4503782_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP034249.1|AZK57554.1|4503836_4505123_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP034249.1|AZK57555.1|4505128_4506118_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP034249.1|AZK57556.1|4506114_4506936_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP034249.1|AZK57557.1|4506938_4507316_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP034249.1|AZK57558.1|4507320_4508169_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP034249.1|AZK57559.1|4508121_4508325_-|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
CP034249_1	1.1\|4013835\|36\|CP034249\|CRISPRCasFinder	4013835-4013870	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
CP034249_1	1.1\|4013835\|36\|CP034249\|CRISPRCasFinder	4013835-4013870	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
CP034249_1	1.1\|4013835\|36\|CP034249\|CRISPRCasFinder	4013835-4013870	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 1.1|4013835|36|CP034249|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

2. spacer 1.1|4013835|36|CP034249|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

3. spacer 1.1|4013835|36|CP034249|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

445790 : 515168

uncultured_Caudovirales_phage(61.11%)

integrase,tail,portal,protease,capsid,terminase,head,tRNA

attL 463398:463415|attR 479393:479410

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK53860.1\|445790_446738_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
AZK53861.1\|446752_447262_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AZK53862.1\|447390_448515_+	DNA-protecting protein DprA	NA	NA	NA	NA
AZK53863.1\|448486_448960_+	DUF494 domain-containing protein	NA	NA	NA	NA
AZK53864.1\|448985_449528_+	hypothetical protein	NA	NA	NA	NA
AZK53865.1\|449532_450105_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AZK53866.1\|450108_450927_+	shikimate dehydrogenase	NA	NA	NA	NA
AZK53867.1\|450923_451181_+	DUF1488 domain-containing protein	NA	NA	NA	NA
AZK53868.1\|451156_451711_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AZK53869.1\|457506_457728_-	hypothetical protein	NA	NA	NA	NA
AZK53870.1\|458021_461132_-	efflux RND transporter permease subunit	NA	NA	NA	NA
AZK53871.1\|461144_462284_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZK53872.1\|462662_463313_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
463398:463415	attL	NA	NA	NA	NA
AZK53873.1\|463588_464815_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AZK53874.1\|464907_465849_+	hypothetical protein	NA	NA	NA	NA
AZK53875.1\|466030_466315_+	AlpA family phage regulatory protein	NA	NA	NA	NA
AZK53876.1\|466325_467105_+	hypothetical protein	Q8HA02	Enterobacteria_phage	8.1e-40	51.5
AZK58335.1\|467228_467423_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AZK58334.1\|467556_467826_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
AZK53877.1\|467818_468007_+	hypothetical protein	NA	NA	NA	NA
AZK53878.1\|467999_468314_+	hypothetical protein	NA	NA	NA	NA
AZK53879.1\|468310_468679_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AZK53880.1\|468675_469041_+	hypothetical protein	NA	NA	NA	NA
AZK53881.1\|469040_471176_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AZK53882.1\|471518_471854_+	hypothetical protein	NA	NA	NA	NA
AZK53883.1\|471902_472415_-	hypothetical protein	NA	NA	NA	NA
AZK53884.1\|472678_473845_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AZK53885.1\|473896_474457_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AZK53886.1\|474458_475700_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AZK53887.1\|475696_476032_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AZK53888.1\|476028_476328_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AZK53889.1\|476327_476771_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AZK53890.1\|476897_477089_+\|terminase	terminase	NA	NA	NA	NA
AZK53891.1\|477046_477403_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AZK53892.1\|477386_479048_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AZK53893.1\|479050_479242_+	hypothetical protein	NA	NA	NA	NA
AZK53894.1\|479395_479692_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
479393:479410	attR	NA	NA	NA	NA
AZK53895.1\|479716_480682_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZK53896.1\|480839_481067_-	hypothetical protein	NA	NA	NA	NA
AZK53897.1\|481039_481921_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AZK58336.1\|481932_483384_-	sodium/pantothenate symporter	NA	NA	NA	NA
AZK53898.1\|483373_483616_-	DUF997 family protein	NA	NA	NA	NA
AZK53899.1\|483726_485076_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZK53900.1\|485086_485554_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZK53901.1\|485576_486029_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AZK53902.1\|486252_486861_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AZK53903.1\|486860_487862_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AZK53904.1\|488090_488282_+	hypothetical protein	NA	NA	NA	NA
AZK53905.1\|488361_490302_+	RNase E specificity factor CsrD	NA	NA	NA	NA
AZK53906.1\|490607_491651_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AZK53907.1\|491721_492714_+	rod shape-determining protein MreC	NA	NA	NA	NA
AZK53908.1\|492713_493202_+	rod shape-determining protein MreD	NA	NA	NA	NA
AZK53909.1\|493209_493791_+	septum formation inhibitor Maf	NA	NA	NA	NA
AZK53910.1\|493793_495263_+	ribonuclease G	NA	NA	NA	NA
AZK53911.1\|495300_499098_+	AsmA2 domain-containing protein	NA	NA	NA	NA
AZK53912.1\|499186_500632_+\|protease	metalloprotease TldD	NA	NA	NA	NA
AZK53913.1\|500667_501597_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AZK53914.1\|501728_501932_+	protein AaeX	NA	NA	NA	NA
AZK53915.1\|501939_502872_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AZK53916.1\|502877_504845_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AZK53917.1\|504924_505200_+	hypothetical protein	NA	NA	NA	NA
AZK53918.1\|505250_505517_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AZK53919.1\|505615_505879_-	DUF1471 domain-containing protein	NA	NA	NA	NA
AZK53920.1\|506254_506725_-	transcriptional regulator ArgR	NA	NA	NA	NA
AZK53921.1\|507139_508078_+	malate dehydrogenase	NA	NA	NA	NA
AZK53922.1\|508214_509273_-\|protease	serine endoprotease DegS	NA	NA	NA	NA
AZK53923.1\|509360_510728_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AZK53924.1\|510901_511300_-	DUF1043 family protein	NA	NA	NA	NA
AZK53925.1\|511490_512618_+	cell division protein ZapE	NA	NA	NA	NA
AZK53926.1\|512883_513312_+	50S ribosomal protein L13	NA	NA	NA	NA
AZK53927.1\|513327_513720_+	30S ribosomal protein S9	NA	NA	NA	NA
AZK53928.1\|513829_514033_-	hypothetical protein	NA	NA	NA	NA
AZK53929.1\|514031_514670_+	stringent starvation protein A	NA	NA	NA	NA
AZK53930.1\|514673_515168_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

1255886 : 1335013

Salmonella_phage(72.92%)

lysis,transposase,integrase,tail,portal,capsid,plate,coat,head,tRNA

attL 1254180:1254226|attR 1293963:1294009

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1254180:1254226	attL	NA	NA	NA	NA
AZK54624.1\|1255886_1256912_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
AZK54625.1\|1256914_1257544_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AZK54626.1\|1257666_1257909_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AZK54627.1\|1257941_1258451_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AZK54628.1\|1258458_1258659_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AZK54629.1\|1258622_1258961_+	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AZK54630.1\|1259028_1259262_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AZK54631.1\|1259261_1259489_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AZK54632.1\|1259485_1260337_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AZK54633.1\|1260333_1262718_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AZK54634.1\|1262947_1263199_+	hypothetical protein	NA	NA	NA	NA
AZK54635.1\|1263198_1264683_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AZK54636.1\|1264790_1264979_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AZK54637.1\|1264990_1265224_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AZK54638.1\|1265319_1266003_-	hypothetical protein	NA	NA	NA	NA
AZK54639.1\|1265989_1267069_-	hypothetical protein	NA	NA	NA	NA
AZK54640.1\|1267068_1268070_-	hypothetical protein	NA	NA	NA	NA
AZK54641.1\|1268591_1268861_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AZK54642.1\|1268917_1269961_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AZK54643.1\|1269960_1271724_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AZK54644.1\|1272126_1273318_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
AZK54645.1\|1274020_1275073_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AZK54646.1\|1275076_1275730_+	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AZK54647.1\|1275825_1276290_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AZK54648.1\|1276289_1276493_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	2.8e-29	88.1
AZK58372.1\|1276496_1276712_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AZK54649.1\|1276692_1277202_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AZK54650.1\|1277206_1277590_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AZK54651.1\|1277586_1278015_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AZK54652.1\|1277944_1278148_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AZK54653.1\|1278110_1278533_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AZK54654.1\|1278525_1278972_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AZK54655.1\|1278994_1279861_-	hypothetical protein	NA	NA	NA	NA
AZK54656.1\|1279955_1280528_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AZK54657.1\|1280524_1280887_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AZK54658.1\|1280873_1281782_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AZK54659.1\|1281774_1282446_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AZK54660.1\|1282447_1284397_+\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AZK54661.1\|1284406_1285525_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AZK54662.1\|1285576_1286650_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AZK54663.1\|1286798_1287971_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AZK54664.1\|1287980_1288496_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AZK54665.1\|1288548_1288848_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AZK54666.1\|1288862_1288982_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AZK54667.1\|1288974_1291605_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
AZK54668.1\|1291601_1292087_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
AZK54669.1\|1292083_1293178_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AZK54670.1\|1293244_1293463_+	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AZK54671.1\|1293490_1293868_-	hypothetical protein	NA	NA	NA	NA
AZK54672.1\|1294471_1294954_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1293963:1294009	attR	NA	NA	NA	NA
AZK54673.1\|1295064_1295541_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AZK54674.1\|1295530_1295821_+	RnfH family protein	NA	NA	NA	NA
AZK54675.1\|1295887_1296229_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AZK54676.1\|1296376_1298038_-	DNA repair protein RecN	NA	NA	NA	NA
AZK54677.1\|1298124_1299003_-	NAD(+) kinase	NA	NA	NA	NA
AZK54678.1\|1299127_1299718_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AZK54679.1\|1299837_1301124_-	DUF21 domain-containing protein	NA	NA	NA	NA
AZK54680.1\|1301143_1301935_-	inner membrane protein YpjD	NA	NA	NA	NA
AZK54681.1\|1302098_1303463_+	signal recognition particle protein	NA	NA	NA	NA
AZK54682.1\|1303722_1303971_+	30S ribosomal protein S16	NA	NA	NA	NA
AZK58373.1\|1303989_1304538_+	ribosome maturation factor RimM	NA	NA	NA	NA
AZK54683.1\|1304569_1305337_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZK54684.1\|1305376_1305724_+	50S ribosomal protein L19	NA	NA	NA	NA
AZK54685.1\|1305843_1306302_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AZK54686.1\|1306358_1307729_+	PepSY domain-containing protein	NA	NA	NA	NA
AZK54687.1\|1307737_1308220_-	OmpA family protein	NA	NA	NA	NA
AZK54688.1\|1308233_1309457_-	diguanylate cyclase	NA	NA	NA	NA
AZK54689.1\|1309449_1309959_-	YfiR family protein	NA	NA	NA	NA
AZK54690.1\|1310301_1311372_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AZK54691.1\|1311381_1312503_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AZK54692.1\|1312565_1313438_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AZK54693.1\|1313434_1314595_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AZK58374.1\|1314695_1314743_-	hypothetical protein	NA	NA	NA	NA
AZK54694.1\|1314849_1315185_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AZK54695.1\|1315455_1316193_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AZK54696.1\|1316324_1317305_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AZK54697.1\|1317301_1318033_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AZK54698.1\|1318162_1320736_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AZK54699.1\|1326701_1328000_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
AZK54700.1\|1328003_1328327_-	YfiM family lipoprotein	NA	NA	NA	NA
AZK58375.1\|1328368_1329724_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AZK54701.1\|1329844_1332496_-	protein lysine acetyltransferase	NA	NA	NA	NA
AZK54702.1\|1332530_1333229_-	DTW domain-containing protein	NA	NA	NA	NA
AZK54703.1\|1333298_1333724_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AZK54704.1\|1333927_1335013_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_3

1743855 : 1750758

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK55061.1\|1743855_1744719_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AZK55062.1\|1744729_1745503_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AZK58388.1\|1745743_1746637_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	4.6e-15	29.8
AZK55063.1\|1746880_1748242_-	U32 family peptidase	Q6DW11	Phage_TP	6.1e-208	95.1
AZK55064.1\|1748560_1749283_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AZK55065.1\|1749279_1750758_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_4

2732933 : 2743820

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK55949.1\|2732933_2736041_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AZK55950.1\|2736095_2737361_+	MFS transporter	NA	NA	NA	NA
AZK55951.1\|2737391_2738480_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AZK55952.1\|2738566_2738827_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AZK55953.1\|2739124_2739985_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AZK55954.1\|2740005_2740767_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AZK55955.1\|2741027_2741930_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AZK55956.1\|2741941_2743207_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AZK55957.1\|2743199_2743820_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

3002343 : 3069081

Enterobacteria_phage(20.0%)

transposase,integrase,tail,holin,terminase

attL 3002125:3002140|attR 3066387:3066402

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3002125:3002140	attL	NA	NA	NA	NA
AZK56185.1\|3002343_3003015_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6
AZK58455.1\|3003201_3004029_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
AZK56186.1\|3004104_3005370_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	9.6e-208	82.7
AZK56187.1\|3005371_3005791_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AZK56188.1\|3005870_3007355_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AZK56189.1\|3007354_3007606_-	hypothetical protein	NA	NA	NA	NA
AZK56190.1\|3007780_3009265_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AZK56191.1\|3009264_3009516_-	hypothetical protein	NA	NA	NA	NA
AZK56192.1\|3010162_3010585_-	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
AZK56193.1\|3011177_3011882_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AZK56194.1\|3012058_3012823_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AZK56195.1\|3012910_3013024_+	NTP-binding protein	NA	NA	NA	NA
AZK56196.1\|3013329_3013830_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZK56197.1\|3013848_3014028_+	hypothetical protein	NA	NA	NA	NA
AZK56198.1\|3013957_3014797_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
AZK56199.1\|3014790_3015138_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AZK58456.1\|3015301_3016093_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AZK56200.1\|3016238_3017198_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
AZK56201.1\|3017088_3017793_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AZK56202.1\|3018041_3019985_+	flagellar biosynthesis protein	A0A286S1P0	Klebsiella_phage	1.1e-37	69.8
AZK56203.1\|3020226_3020826_+	hypothetical protein	NA	NA	NA	NA
AZK56204.1\|3020859_3021054_-	hypothetical protein	NA	NA	NA	NA
AZK56205.1\|3021050_3021782_-	hypothetical protein	NA	NA	NA	NA
AZK56206.1\|3021785_3024740_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	4.2e-44	68.3
AZK56207.1\|3024816_3027885_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.5
AZK56208.1\|3027881_3028262_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
AZK56209.1\|3028271_3028754_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.7e-80	94.4
AZK56210.1\|3028934_3029399_-	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-58	67.8
AZK56211.1\|3029713_3030049_-	hypothetical protein	NA	NA	NA	NA
AZK56212.1\|3030132_3033030_-\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	1.6e-104	32.7
AZK58457.1\|3033291_3033483_-	hypothetical protein	S4TR42	Salmonella_phage	7.8e-05	78.3
AZK56213.1\|3033707_3034064_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
AZK56214.1\|3034140_3034347_-	hypothetical protein	NA	NA	NA	NA
AZK56215.1\|3034484_3034967_-	hypothetical protein	NA	NA	NA	NA
AZK56216.1\|3035020_3036193_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	1.2e-23	27.0
AZK56217.1\|3036216_3036609_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AZK56218.1\|3036605_3037157_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-28	39.9
AZK56219.1\|3037158_3037542_-	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
AZK56220.1\|3037528_3037762_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
AZK56221.1\|3037771_3038026_-	hypothetical protein	J9Q7U0	Salmonella_phage	1.0e-20	52.4
AZK56222.1\|3038027_3038423_-	protein singed	A0A1B1P9F2	Acinetobacter_phage	4.3e-13	38.5
AZK56223.1\|3038744_3039698_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
AZK56224.1\|3039708_3040494_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
AZK56225.1\|3041024_3042137_-	hypothetical protein	I6PD76	Cronobacter_phage	5.6e-111	55.1
AZK56226.1\|3042120_3043521_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.1e-127	53.5
AZK56227.1\|3043520_3044828_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
AZK56228.1\|3044805_3045810_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.5e-38	45.5
AZK56229.1\|3046358_3046544_-	hypothetical protein	NA	NA	NA	NA
AZK56230.1\|3046672_3046918_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
AZK56231.1\|3047731_3047926_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.4e-25	89.1
AZK56232.1\|3047876_3048152_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
AZK56233.1\|3048148_3048493_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
AZK56234.1\|3048489_3049029_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
AZK58458.1\|3049025_3049325_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
AZK56235.1\|3049803_3050850_-\|transposase	IS481-like element ISKpn28 family transposase	A0A0M3LR35	Mannheimia_phage	1.3e-05	21.9
AZK58459.1\|3051075_3051765_-	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	53.1
AZK56236.1\|3051764_3051905_-	YlcG family protein	NA	NA	NA	NA
AZK56237.1\|3051901_3052540_-	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
AZK56238.1\|3052532_3053201_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
AZK56239.1\|3053197_3053365_-	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
AZK56240.1\|3053345_3053813_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
AZK56241.1\|3054333_3055362_+	hypothetical protein	NA	NA	NA	NA
AZK56242.1\|3055569_3055815_-	hypothetical protein	NA	NA	NA	NA
AZK56243.1\|3055870_3056173_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZK56244.1\|3056169_3057018_-	AAA family ATPase	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
AZK56245.1\|3057014_3057875_-	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
AZK56246.1\|3057960_3058182_-	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AZK56247.1\|3058222_3058450_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AZK58460.1\|3058561_3059260_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
AZK56248.1\|3059282_3059402_+	hypothetical protein	NA	NA	NA	NA
AZK56249.1\|3059547_3060624_+	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
AZK56250.1\|3060705_3060909_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
AZK56251.1\|3061337_3061532_+	hypothetical protein	NA	NA	NA	NA
AZK56252.1\|3061620_3061905_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
AZK56253.1\|3061920_3062766_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
AZK56254.1\|3062762_3063050_+	hypothetical protein	NA	NA	NA	NA
AZK56255.1\|3063051_3063732_+	exonuclease	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
AZK56256.1\|3063728_3064157_+	regulator	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
AZK56257.1\|3064153_3064816_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
AZK56258.1\|3064812_3065127_+	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AZK56259.1\|3065023_3066211_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
AZK56260.1\|3066387_3067278_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3066387:3066402	attR	NA	NA	NA	NA
AZK56261.1\|3067277_3068270_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AZK56262.1\|3068271_3069081_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_6

3445575 : 3531323

Salmonella_phage(50.0%)

lysis,integrase,tail,portal,protease,capsid,plate,head,tRNA

attL 3501099:3501117|attR 3531398:3531416

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK56606.1\|3445575_3446868_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
AZK56607.1\|3446958_3448302_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
AZK56608.1\|3448310_3448922_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AZK56609.1\|3449044_3453298_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
AZK56610.1\|3453433_3453928_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AZK56611.1\|3454433_3455429_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.3e-62	44.0
AZK56612.1\|3455543_3457310_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
AZK56613.1\|3457310_3459032_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AZK56614.1\|3459076_3459778_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AZK56615.1\|3460131_3460350_+	translation initiation factor IF-1	NA	NA	NA	NA
AZK56616.1\|3460470_3462750_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AZK56617.1\|3462780_3463098_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AZK56618.1\|3463423_3463645_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AZK56619.1\|3463721_3465662_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AZK56620.1\|3465658_3466774_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AZK56621.1\|3466920_3468579_-	ATP-dependent endonuclease	NA	NA	NA	NA
AZK56622.1\|3468998_3469694_+	aquaporin Z	NA	NA	NA	NA
AZK56623.1\|3469809_3470709_+	lysine exporter LysO family protein	NA	NA	NA	NA
AZK56624.1\|3470852_3472505_+	hydroxylamine reductase	NA	NA	NA	NA
AZK56625.1\|3472515_3473484_+	NADH oxidoreductase	NA	NA	NA	NA
AZK56626.1\|3473434_3473638_+	hypothetical protein	NA	NA	NA	NA
AZK56627.1\|3473695_3474130_-	DoxX family protein	NA	NA	NA	NA
AZK56628.1\|3474281_3476000_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
AZK56629.1\|3476038_3477040_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AZK56630.1\|3477050_3478493_+	SDR family oxidoreductase	NA	NA	NA	NA
AZK56631.1\|3478580_3479594_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZK56632.1\|3479590_3480421_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
AZK56633.1\|3480452_3481592_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZK56634.1\|3481644_3481824_+	hypothetical protein	NA	NA	NA	NA
AZK56635.1\|3482469_3482985_+	lipoprotein	NA	NA	NA	NA
AZK56636.1\|3483211_3483940_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
AZK56637.1\|3483960_3484692_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZK56638.1\|3484698_3485415_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AZK56639.1\|3485414_3486083_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AZK56640.1\|3486266_3486998_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZK56641.1\|3487040_3488513_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
AZK56642.1\|3488509_3489226_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
AZK56643.1\|3489304_3490432_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
AZK56644.1\|3490473_3490962_-	DUF2593 family protein	NA	NA	NA	NA
AZK56645.1\|3491019_3491865_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AZK56646.1\|3491861_3492815_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
AZK58479.1\|3492825_3493959_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
AZK56647.1\|3494122_3495184_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
AZK56648.1\|3495581_3496061_-	YbjN domain-containing protein	NA	NA	NA	NA
AZK56649.1\|3496149_3497052_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
AZK56650.1\|3497873_3498161_-	DUF1418 family protein	NA	NA	NA	NA
AZK56651.1\|3498363_3498627_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
AZK56652.1\|3498633_3499017_-	hypothetical protein	NA	NA	NA	NA
AZK56653.1\|3499283_3500969_+	transporter	NA	NA	NA	NA
3501099:3501117	attL	NA	NA	NA	NA
AZK56654.1\|3501188_3501407_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AZK56655.1\|3501498_3502599_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AZK56656.1\|3502595_3503081_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AZK56657.1\|3503077_3505705_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AZK56658.1\|3505697_3505817_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AZK56659.1\|3505831_3506131_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AZK56660.1\|3506183_3506699_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AZK56661.1\|3506708_3507881_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AZK56662.1\|3508019_3509096_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AZK56663.1\|3509125_3509329_-	hypothetical protein	NA	NA	NA	NA
AZK56664.1\|3509325_3510057_-	hypothetical protein	NA	NA	NA	NA
AZK56665.1\|3510060_3513012_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AZK56666.1\|3513013_3513613_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AZK56667.1\|3513605_3514514_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AZK56668.1\|3514500_3514863_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
AZK56669.1\|3514859_3515432_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AZK56670.1\|3515526_3516219_+	hypothetical protein	NA	NA	NA	NA
AZK56671.1\|3516215_3516662_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AZK56672.1\|3516654_3517086_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AZK56673.1\|3517181_3517610_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AZK56674.1\|3517606_3517990_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AZK56675.1\|3517994_3518504_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AZK56676.1\|3518484_3518700_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AZK56677.1\|3518703_3518907_-\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AZK56678.1\|3518906_3519371_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AZK56679.1\|3519466_3520117_-	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AZK56680.1\|3520120_3521179_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AZK56681.1\|3521195_3522029_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AZK56682.1\|3522171_3523938_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AZK56683.1\|3523937_3524963_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AZK56684.1\|3525024_3526767_-	hypothetical protein	NA	NA	NA	NA
AZK56685.1\|3527042_3527720_-	hypothetical protein	NA	NA	NA	NA
AZK56686.1\|3527834_3528140_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AZK58480.1\|3528078_3528267_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AZK56687.1\|3528367_3529852_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AZK56688.1\|3529851_3530103_-	hypothetical protein	NA	NA	NA	NA
AZK56689.1\|3530270_3531323_+\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3531398:3531416	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3979650 : 4024925

Escherichia_phage(26.42%)

lysis,integrase,coat,terminase,head,tRNA

attL 3970953:3970999|attR 4021997:4022043

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3970953:3970999	attL	NA	NA	NA	NA
AZK57073.1\|3979650_3982128_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	2.7e-198	45.6
AZK57074.1\|3982114_3982510_-	hypothetical protein	F1C5F2	Cronobacter_phage	8.0e-36	54.0
AZK57075.1\|3982506_3982977_-	hypothetical protein	R9TPR6	Aeromonas_phage	2.5e-28	41.0
AZK58502.1\|3982976_3983396_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	48.5
AZK57076.1\|3983495_3986942_-	hypothetical protein	Q5G8W8	Enterobacteria_phage	1.4e-163	48.6
AZK57077.1\|3987034_3987538_-	hypothetical protein	NA	NA	NA	NA
AZK57078.1\|3987665_3988451_-	phage repressor protein	A0A2L1IV39	Escherichia_phage	1.9e-84	59.7
AZK57079.1\|3988516_3989230_-	hypothetical protein	H6WRU8	Salmonella_phage	3.9e-49	50.2
AZK57080.1\|3989219_3989390_-	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	6.1e-17	87.0
AZK57081.1\|3989489_3989849_+	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.8e-16	47.5
AZK58503.1\|3989865_3990336_-	hypothetical protein	NA	NA	NA	NA
AZK57082.1\|3990629_3990884_-	hypothetical protein	K7PM89	Enterobacteria_phage	6.7e-20	73.0
AZK57083.1\|3990886_3991642_-	DNA-binding protein	K7PGT4	Enterobacteria_phage	2.4e-60	51.0
AZK57084.1\|3991817_3992495_-	hypothetical protein	F1C5E8	Cronobacter_phage	4.8e-73	57.9
AZK57085.1\|3992547_3993300_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	1.7e-42	41.7
AZK57086.1\|3993368_3993761_-	hypothetical protein	G0ZNE4	Cronobacter_phage	5.1e-35	52.7
AZK57087.1\|3993757_3994183_-	HK97 gp10 family phage protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
AZK57088.1\|3994185_3994548_-	hypothetical protein	A0A173GCE0	Salmonella_phage	1.8e-18	45.0
AZK57089.1\|3994547_3994721_-	50S ribosomal protein L13	I6R0P9	Salmonella_phage	1.4e-13	56.1
AZK57090.1\|3994720_3995101_-	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
AZK57091.1\|3995103_3995343_-	hypothetical protein	NA	NA	NA	NA
AZK57092.1\|3995353_3996448_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.7e-123	62.8
AZK57093.1\|3996459_3996888_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.6e-42	60.8
AZK57094.1\|3996891_3998277_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-154	60.0
AZK57095.1\|3998349_3998826_-	hypothetical protein	NA	NA	NA	NA
AZK57096.1\|3998867_3999872_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	9.0e-116	69.7
AZK57097.1\|3999846_4001268_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.6e-148	57.1
AZK57098.1\|4001280_4002753_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	1.3e-248	82.5
AZK57099.1\|4002752_4003355_-	hypothetical protein	G8C7P2	Escherichia_phage	5.4e-76	80.9
AZK57100.1\|4003725_4004055_+	hypothetical protein	NA	NA	NA	NA
AZK57101.1\|4004160_4004625_-\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.4e-55	73.2
AZK57102.1\|4004621_4005152_-	lysozyme	G9L6J6	Escherichia_phage	6.0e-79	78.5
AZK57103.1\|4005154_4005403_-\|lysis	lysis protein	NA	NA	NA	NA
AZK57104.1\|4006312_4007002_-	antiterminator	I6PDF8	Cronobacter_phage	1.4e-56	54.5
AZK57105.1\|4006998_4007529_-	HNH endonuclease	A0A193GYW9	Enterobacter_phage	5.2e-30	43.1
AZK57106.1\|4007521_4007659_-	YlcG family protein	NA	NA	NA	NA
AZK57107.1\|4007655_4008291_-	NinG family protein	M9NYX8	Enterobacteria_phage	2.7e-81	77.9
AZK57108.1\|4008283_4008454_-	NinE family protein	G8C7V4	Escherichia_phage	1.3e-14	73.2
AZK57109.1\|4008453_4008909_-	hypothetical protein	K7P7B8	Enterobacteria_phage	8.0e-56	69.5
AZK58504.1\|4009161_4009410_-	hypothetical protein	NA	NA	NA	NA
AZK57110.1\|4009409_4010057_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	4.5e-12	32.6
AZK57111.1\|4010229_4011072_-	ead/Ea22-like family protein	A0A2H4FRZ0	Salmonella_phage	1.8e-29	60.8
AZK57112.1\|4011178_4011685_-	hypothetical protein	A0A0A6Z565	Enterobacter_phage	3.0e-27	59.6
AZK57113.1\|4011681_4011975_-	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
AZK57114.1\|4011974_4013405_-	helicase DnaB	Q9MCT4	Escherichia_phage	2.6e-185	66.7
AZK57115.1\|4013394_4014294_-	DNA replication protein	F1C5C3	Cronobacter_phage	5.4e-88	54.9
AZK57116.1\|4014518_4014740_-	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AZK57117.1\|4014780_4015014_-	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	4.3e-13	50.7
AZK57118.1\|4015141_4015831_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	4.3e-61	52.2
AZK57119.1\|4016181_4016397_+	hypothetical protein	B5WZV1	Pseudomonas_phage	1.6e-09	48.6
AZK57120.1\|4016496_4016691_+	hypothetical protein	NA	NA	NA	NA
AZK57121.1\|4016779_4017064_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	8.0e-30	62.8
AZK57122.1\|4017079_4017925_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	6.9e-69	59.2
AZK57123.1\|4017921_4018602_+	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	93.4
AZK57124.1\|4018598_4018757_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	3.0e-10	60.8
AZK57125.1\|4018753_4019410_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.5
AZK57126.1\|4019406_4020174_+	dcm methylase	D5LH17	Escherichia_phage	1.7e-66	53.4
AZK57127.1\|4020170_4020389_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.2e-09	47.2
AZK57128.1\|4020390_4020606_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	4.0e-13	52.9
AZK57129.1\|4020607_4020943_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZK58505.1\|4020939_4021983_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.5e-177	86.2
AZK57130.1\|4022413_4023280_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
4021997:4022043	attR	NA	NA	NA	NA
AZK57131.1\|4023281_4023494_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
AZK57132.1\|4023539_4024925_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_8

4234484 : 4246138

Enterobacteria_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK57330.1\|4234484_4235588_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
AZK57331.1\|4235598_4236852_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AZK57332.1\|4237204_4238395_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AZK57333.1\|4238382_4239333_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AZK57334.1\|4239332_4239758_+	hypothetical protein	NA	NA	NA	NA
AZK57335.1\|4240326_4240893_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
AZK57336.1\|4240910_4241156_-	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
AZK57337.1\|4241152_4241890_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
AZK57338.1\|4242431_4242698_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AZK57339.1\|4242694_4243252_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AZK57340.1\|4243248_4243476_+	hypothetical protein	NA	NA	NA	NA
AZK57341.1\|4243472_4243793_+	hypothetical protein	NA	NA	NA	NA
AZK57342.1\|4243804_4246138_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2

DBSCAN-SWA_9

4719041 : 4729720

Stx2-converting_phage(55.56%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZK57748.1\|4719041_4720580_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.1e-280	94.3
AZK57749.1\|4720628_4720976_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AZK57750.1\|4720972_4721377_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.3e-69	98.5
AZK57751.1\|4721466_4721961_+	hypothetical protein	NA	NA	NA	NA
AZK57752.1\|4722057_4722279_+	AlpA family transcriptional regulator	NA	NA	NA	NA
AZK57753.1\|4722318_4722459_-	hypothetical protein	NA	NA	NA	NA
AZK58537.1\|4722451_4722616_-	hypothetical protein	A0A1B0Z042	Pseudomonas_phage	6.5e-08	66.7
AZK57754.1\|4722616_4722988_-	hypothetical protein	NA	NA	NA	NA
AZK57755.1\|4723062_4723503_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
AZK57756.1\|4723499_4723850_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
AZK57757.1\|4723881_4725474_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
AZK57758.1\|4725529_4726498_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZK57759.1\|4727842_4728247_-	hypothetical protein	Q76S41	Shigella_phage	1.0e-22	48.3
AZK57760.1\|4728466_4729720_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	1.1e-62	44.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage