CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
CP034350	Streptomyces sp. W1SF4 chromosome, complete genome	5 crisprs	csa3,c2c9_V-U4,DEDDh,WYL,cas4,Cas9_archaeal,cas3,Cas14u_CAS-V,casR,DinG	4	5	3
CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	1 crisprs	WYL	0	1	0
CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	1 crisprs	NA	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034350_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034350_4

2184878-2185005

Orphan

Consensus_repeat	Method
CCGGACCCGCAGACAGGGAGGCGGGTGGGCAACCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034350_4

>merge|CP034350|4|2184878-2185005|CRISPRCasFinder
CCGGACCCGCAGACAGGGAGGCGGGTGGGCAACCACCGCCCCGCCCCCACCCCTCGCGGGGGAGACAGCCGGCCCGGAGCGGCGCCACGCCCCACCGGCCCGCAGACAGGGAGGCGGGTGGGCAACCA

>CP034350|4|3|2184878-2185005|CRISPRCasFinder
CCGGACCCGCAGACAGGGAGGCGGGTGGGCAACCA	CCGCCCCGCCCCCACCCCTCGCGGGGGAGACAGCCGGCCCGGAGCGGCGCCACGCCCC
ACCGGCCCGCAGACAGGGAGGCGGGTGGGCAACCA

Protein	Signature genes	Signature genes Name	Protein_function
CP034350.1\|AZM88817.1\|2177933_2179088_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
CP034350.1\|AZM88821.1\|2185021_2186164_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340831
CP034350.1\|AZM88812.1\|2173371_2174481_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238045
CP034350.1\|AZM88819.1\|2179780_2180563_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277338
CP034350.1\|AZM88827.1\|2191689_2192424_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
CP034350.1\|AZM88818.1\|2179240_2179684_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176861
CP034350.1\|AZM88825.1\|2189932_2191294_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|377585
CP034350.1\|AZM88822.1\|2186185_2187310_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM88828.1\|2192420_2192702_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366431
CP034350.1\|AZM88814.1\|2175560_2176319_-\|endonuclease	unknown	unknown	gnl\|CDD\|226098
CP034350.1\|AZM93026.1\|2182610_2184254_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
CP034350.1\|AZM88816.1\|2177392_2177866_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375065
CP034350.1\|AZM88820.1\|2180817_2182614_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341233
CP034350.1\|AZM88824.1\|2188720_2189773_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353
CP034350.1\|AZM88826.1\|2191336_2191576_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM93027.1\|2192901_2194293_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
CP034350.1\|AZM88815.1\|2176389_2177331_-\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
CP034350.1\|AZM88823.1\|2187335_2188388_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366353
CP034350.1\|AZM88829.1\|2194736_2195801_-\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
CP034350.1\|AZM88813.1\|2174773_2175028_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034350.1\|AZM88817.1\|2177933_2179088_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	7.52438e-27
CP034350.1\|AZM88821.1\|2185021_2186164_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.49349e-69
CP034350.1\|AZM88812.1\|2173371_2174481_-\|hypothetical-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.000455933
CP034350.1\|AZM88819.1\|2179780_2180563_-\|metallophosphoesterase	gnl\|CDD\|277338	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.15567e-16
CP034350.1\|AZM88827.1\|2191689_2192424_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	6.77585e-28
CP034350.1\|AZM88818.1\|2179240_2179684_-\|SRPBCC-family-protein	gnl\|CDD\|176861	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	1.98348e-54
CP034350.1\|AZM88825.1\|2189932_2191294_-\|RNA-binding-protein	gnl\|CDD\|377585	pfam05991, NYN_YacP, YacP-like NYN domain. This family consists of bacterial proteins related to YacP. This family is uncharacterized functionally, but it has been suggested that these proteins are nucleases due to them containing a NYN domain. NYN (for N4BP1, YacP-like Nuclease) domains were discovered by Anantharaman and Aravind. Based on gene neighborhoods it was suggested that the bacterial YacP proteins interact with the Ribonuclease III and TrmH methylase in a processome complex that catalyzes the maturation of rRNA and tRNA.	7.03042e-13
CP034350.1\|AZM88828.1\|2192420_2192702_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	6.46221e-14
CP034350.1\|AZM88814.1\|2175560_2176319_-\|endonuclease	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	2.3568e-22
CP034350.1\|AZM93026.1\|2182610_2184254_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	4.20033e-21
CP034350.1\|AZM88816.1\|2177392_2177866_-\|hypothetical-protein	gnl\|CDD\|375065	pfam17230, DUF5304, Family of unknown function (DUF5304). This family of unknown function is found in Actinobacteria.	3.31023e-48
CP034350.1\|AZM88820.1\|2180817_2182614_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
CP034350.1\|AZM88824.1\|2188720_2189773_-\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.06026e-29
CP034350.1\|AZM93027.1\|2192901_2194293_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.54923e-94
CP034350.1\|AZM88829.1\|2194736_2195801_-\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	6.17499e-164
CP034350.1\|AZM88823.1\|2187335_2188388_-\|hypothetical-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	2.29649e-32
CP034350.1\|AZM88815.1\|2176389_2177331_-\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	9.87783e-135

>CP034350.1|AZM93026.1|2182610_2184254_-|GMC-family-oxidoreductase
MAGWVESAHDAPMTPNLTRRQLGLNALRAAAALGITRIGLGAAAAAEPPAAPYAPAVVVGSGYGSAVAALRLGQAGVRTVVLEMGRLWNTPGPDGKVFPSTSAPDQRSMWFRTRTEAPLAQFLWLDVVNRDISPYPGVLDRVNHGGISVYVGRGVGGGSLVNGGMAPTPRRSYFAEVFPGVDAEEMYGTYFPRARAMLGVNGIDPAWFESTEWYRFARTSRRHAQNTGLKTTFVPNVYDFEYMKREAAGTATRSALAGEVIYGNNHGKKSVDKTYLAAALGTGNVTIETMQRVVAVRQDPAGGYVLTVHTSDVTGRVTQVRELGCGQLFLGAGSLGTTEILLRARETGALPALSEKVGLGWGPNGNVMTARANHLWDTVGCNQATMPALGIDDWDNAANPVFAEIAPLPMGIEHWISMYLAITRNPERGRFVYDAATDSARLNWTRDQNAPAVAAARNLFDRINRRNVTVYRHDLFGDNRAFADDFTYHPLGGCVLGEATDAYGRVKGYQGLYVLDGSLVPGSLGVNPFVTITALAERNMERILARP
>CP034350.1|AZM88820.1|2180817_2182614_+|long-chain-fatty-acid--CoA-ligase
MREFSLPALYEVPSDGNLTDLIRRNAAQHPDTAVISRKVDGRWQDVTAVEFLAEVRDVAKGLIASGIRPGDRVALISRTRYEWVLFDFAIWTAGGVTVPVYETSSPEQIQWILGDSGAVAAVVESPGHSANVASLRDRLPELREVWEIEKDAQGLLKAAGAEVTDAEVDARSALAVADDPATIVYTSGTTGRPKGCVLTHRNFFAECGNVVERLKPLFRTGECSVLLFLPAAHVFGRLVEVAAVLAPIRLGCVPDIKNLTDELQSFRPTLILGVPRVFEKVYNSARAKAQADGKGKIFDAAADTAIAYSRALDTPSGPSFGLKLKHKLFSKLVYSKLHAVLGGRGEYAISGGAPLGERLGHFFRGIGFTVLEGYGLTETCAATAFLPWDKQKIGTVGQPLPGSVLRIADDGEVLVHGEHVFKEYWKNEAATAEAMTDGWFHTGDVGTLDEDGYLKITGRKKELIVTAGGKNVAPAVIEDRIRAHALVAECMVVGDARPFVAALVTIDEEFLGRWAAENGKPAGVTAAELREDAELIAAVQKAVDDGNAAVSKAESVRKFRILGSQFTEESGHITPSLKLKRNVVAKDFADEIDALYRA
>CP034350.1|AZM88819.1|2179780_2180563_-|metallophosphoesterase
MGGRKSRTRVHVVSDVHGNTDALARAGEGADALVCLGDLVLFLDYADHSRGIFPDLFGVENAHRIVELRTARRFAEAREFGRRLWDGLDRERMIEEAVRRQYAQMFAAFPSPTYATYGNVDIPGLWSEYAGTGTTVLDGQRVEIGGRVFGFVGGGLPSPMRTPYEVDPEEYAAKVEALGEVDVLCSHIPPEVPELCYDTVARRFERGSEALLAAIRRTRPRYALFGHVHQPLARRARIGATECVNVGHFAATGKPWALEW
>CP034350.1|AZM88818.1|2179240_2179684_-|SRPBCC-family-protein
MAEHTSSSITIDASPADVMAVIADFARYPEWTGEVKEAEVLATDAEGRAEKVRLLLDAGAIKDDHTLAYTWKGADEVSWTLDKSQMLRQLDGSYRLAPLDGGRTEVTYQLTVDVKIPMLGMIKRKAEKVIIDRALAGLKKRVETPRP
>CP034350.1|AZM88817.1|2177933_2179088_-|ArsA-family-ATPase
MQTLLVTGPGGAGRSTVAAATALAAAREGRRVLLLCGPDADPFPDPVPGLRVTPVDSGQEFRTELAALQERGAALIGMLGGRPLGTEELTELPGAEQFALLRALRRAAAAPATDLVVVDMPPLHQAVATLALPAQLRRYLARLLPAERQAARALRPVLAQLAGVPMPAQWLYETAARWDEELAAVQAVVEAPTTRIRLVAEPGPAADTALRTGMLGLALHELRTESLVANRLVPADAAAAHPWAAGIAEQQRAFLDAWTGAGLPVHELAHLGRDPRGTGGLAALTAARDLAPGPVPAPGAGWTVEDRLADDGVLVWAIPLPRARKSELDLIRRGDELLVAAGPHRRIVPLPSALRRCTVSGAALTDGALRVRFTPDPRLWPRER
>CP034350.1|AZM88816.1|2177392_2177866_-|hypothetical-protein
MSEATDHPDADDAWARACAEDLAAEQERRRSARSGDTGGTGGADRPGTAAEELFKLFEAVADKVSSLNNPAVGAAAQDAVRQFVNQAKTAAKPVIERNPEVFGHLAAAGSELLAAYRSAVEGHERRWTHDEPPAPPAPSGKGDEGPGTGPAQRIDLD
>CP034350.1|AZM88815.1|2176389_2177331_-|ROK-family-glucokinase
MGLTIGVDIGGTKIAAGVVDEEGTILETYKVPTPPTADGVTEAICAAVSEVSSSHTIEAVGIGAAGYVDDKRATVLFAPNINWRHEPLKDKVEQRIGLPVVVENDANCAAWGEYRFGAGQGHEDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAILLGLGDGTADGIEGKHISEAARAGDLVAIDAFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGDLVLDPIRKSFKRWLVGGAWRPHAQVLAAQLGGKAGLVGAADLARQG
>CP034350.1|AZM88814.1|2175560_2176319_-|endonuclease
MPHTLHTLPKSETEPDGSAVIRALSYNIRSLRDDEEALARVIRACAPDLVFVQEAPRFFRWRKHAARLAAKTDLVVLGGGATAAGPLLLCSLRAFVERTEDVLLPRTPGLHRRGLATAVVRFGAARVGVVSAHLSLDAAERQAQAQLLLDRAAALGAPHVIAAADVNEAAGGPAFGRLSGALQDCWTVSPWGDGDTFPSTAPNRRIDAVFASPGVEVLACGVPTGLPGITTPDLHAATDHLPVLAALRLPAG
>CP034350.1|AZM88813.1|2174773_2175028_+|hypothetical-protein
MSECYEYVPHRLLHRRVRDIASGTEGILMAVINENVSDTGIERWMELAYIRGACGREFTTAATNVEPAPDQTKTAAGRRDQRSA
>CP034350.1|AZM88812.1|2173371_2174481_-|hypothetical-protein
MATVHHWTGLEAKALRLALRLSVRAFADHLGVGVRTISKWEKLRASTEPRPDTQAILDTALARADAAAHLRFEMFLSDAGGSRTIRSVTSTAPLAWEYESWADDLDRVVVALNQQDFAFADCLLTRWLSRFNRPELDERGLYLFARSTTLLGDLKRYRGTPVGLQSAQHSYAGARAVFTHLDIPRRVAQLDLSLAVVMEMSGKLETAARAYESLAVDDRLSPRDRASARLWVGTALSKDGRHDYATRVMTSATRDFEDLAEPEDWSVAHQKLALARRDAGDLTAALRFLDIACSTGTVRSPMQRVQLTTAQAHILRTDPATRDEGLRLLNEAAKIAAKAELGHQLRSIDAIRRTCEGAFKPLHHRPGSR
>CP034350.1|AZM88821.1|2185021_2186164_-|glycosyltransferase-family-1-protein
MHKTLIVTNDFPPRPGGIQAFLHNMALRLDPERVVVYASTWKHGAEGREATAAFDAEQPFPVVRDRTTMLLPTPRVTRRAVSLLREHGCESVWFGAAAPLGLMGPALRRAGARRIVATTHGHEAGWAQLPAARQLLRRIGEGTDTLTYLGEYTRSRIASAVTDRAAARMVQLPPGVDEKTFHPGSGGAEVRARLGLSDRPVVVCVSRLVPRKGQDTLIEAMPRILAAVPDAALLIVGGGPYEADLRALAAAKGVADSVVFTGAVPWSELPAHYGAGDVFAMPCRTRRGGLDVEGLGIVYLEASATGLPVVAGDSGGAPDAVLDGETGWVVRGGAPDEAADRIITLLGDPELRARMGEAGRAWVERQWRWDHLAEGLRELL
>CP034350.1|AZM88822.1|2186185_2187310_-|hypothetical-protein
MIRVRRRTAVRLLALALCPLPALAGCTGPEPAAPADTAVRRAVADWSAAPPARLAGIPLEDWSYRVATVRQDGVRAFARAELRYRLAGYDAAPAASAREVELTRDGTGWRVTADRPAPGAPAQLWDQGEPAVVRGAHSLVLGVGRSPQELSALADGADRAVPAVGAAWPGPWARRVVVLAPATLDAMAALLGRPADTYRGLGAVTTGSTGGGPAPADRVVVNPEGYAGLSEAGRRIVLTHEVTHVATRAATSARTPQWLSEGFADWVAYRGTGTTPAEGAPELARAVRRGELPGALPADDAFAFGTDPSAAARAYEGAWLACRLVAARWGEGALVRLYELAGREPLPAALEQALGTDLPGLTEAWRQALGADLR
>CP034350.1|AZM88823.1|2187335_2188388_-|hypothetical-protein
MASHRRSGLSGLDRNTKVTAFTAAAAGAAVAITGAPALASPGLPQEPAGSARAQVDRLFEEAEQATERYNEAGEKADALRAQISRAQDAVARGQDRINTMRGVLGTFAGAQYRSGGLDPTVELMLSDDPAAYLDKAAVLGRLSGRRAQQLAELREEQSRIGQQRQDASRKLAELEALRTEVATQKRSVTAKLAAARRLLNEMPSEERADFERASRSGGRGHADGLPDLPVGGGRASGRAMAAVMAARAAVGKPYVWGSTGPSGFDCSGLMVWSYRQAGVSLPRTSQAQRYAGRQVPLSQAQPGDLVTYRSDASHVGMYVGNGQVVHAPYPGARVRYDPVGMMPVSSVTRP
>CP034350.1|AZM88824.1|2188720_2189773_-|hypothetical-protein
MRAPEEKEPAPVASHRRPRPPARTRVTVLTATAAAAVALSAQSAVAAPAGPDKDEVKSKVDALYEEAEQATEKSNGAREHQAELEKEIARLQDAVARDQDELNDLRNTLGSLATAQYRGGGLDPSVALLLSADPETYLDKASTLQQLSGRQLEAVARIQAKQRALAQQRQEAASKLADLDATRKELAEKKKAAQDKLAEAQALLNTLSAQDRGRLKEEEARQSAAGQKAAPAVKASGRAGAALAAAKTKLGSAYIMGATGPSAYDCSGLTQWAYGQAGVGISRTTYTQANDGTRIGRSQLQPGDLVFFYDDLHHVGLYAGNNMTLHASNPRGGVKYESMDNMPFQFGVRI
>CP034350.1|AZM88825.1|2189932_2191294_-|RNA-binding-protein
MEPASGATQADAAGDAAEVLDRPLPEGVRRRVVAIVSDAFGGLTVGDLPAQLRQYARFTPTRRAKFAGNAMAAAVETDGVFRSRIAEKLREAQPELTGALESGAPPAAADPLDVAAAAYVLRPAGWVKLVASAGEEAQRADAERVGDETRRELERLREELAQLKEAQRSGGEQVRAELEAARKEAESLQRKLRSALSDVKRGEAALRKLGGEIDGIRGEAAAQVAAAESESRRLKSRLAEVESALETSRRATREGRSVEDMRLRLLLDTVLDAAAGLRRELALPPVSTRPADTVDAVEPGRMTPKDIAARALSETDPALLDQLLALPQAHLVVDGYNVTKTGYPTMPLEKQRLRLLGGLSMLAAQTGAEMTCVFDGAELAAPVLLAPPRGVRVLFSKAGVTADELIRQLVRAEPPGRPVVVVSTDREVADGVAKAGARPVTSALLLKRLSRVS
>CP034350.1|AZM88826.1|2191336_2191576_-|hypothetical-protein
MTVPLPTDTTRWRCTLCGNLTRFDVTRSSKVVEYVHLDLAGEPKVEEREVVSETIESVRCRWCNAVDQIELVDRPGTDS
>CP034350.1|AZM88827.1|2191689_2192424_+|rhomboid-family-intramembrane-serine-protease
MLCRMIVKWRTLCDAARGPVVTYALIAACCAVFVLGPASGLNPAYGTGDLLVETGTAYFRHWGVVPDELFSGAGRPLLTPLTALFVHGSWLHLLGNMLFLYVFGAMTEERMGRAPFLVFYVCTGYLALAAYAAANASSDQTLVGASGAISAALGAFLCLFPRARVTSLFPFLLFLPLRFPAWIVLLFWFGLQWLAAHRAGSGPGVAYLAHVVGFSLGFCYAWARYRRTTRVRRPVTAGEGDSQP
>CP034350.1|AZM88828.1|2192420_2192702_+|Lrp/AsnC-family-transcriptional-regulator
MITAIVLIKTSVDRIPEIAESIAQLDSVSEVYSVTGTYDLIALVRVARHENLADIIPGRISKIPGVEATDTHVAFRTYSQHDLEAAFAIGLDA
>CP034350.1|AZM93027.1|2192901_2194293_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MNAATAACATAADVPACDGPLPVLGRDVTVPLVTGGEVTYAALDYAASAPALQRVWDDVAAYAPYYGSVHRGAGYLSQLSTDLFEQSRATVAEFLDCRPADQVVFTRSTTDSLNLLAAALPAGCQVFVFETEHHASLLPWGDARVTYLNAPRTPGEAVATLERALADRTASIEEGYGPALVCVTGASNVTGELWPVKELATAAHAHGARIVLDAAQLAPHHPVSVRELDVDWVAFSGHKLYAPFGSGVLAGRADWLQEAQPYLAGGGASRKVARREDGGVDVEWHTTAARHEAGSPNVIGVYSIASACRALREAGFENLVAREEHLIAKVREGLAEVPAVRVLSLFGDDAPRVGVISFVVDGWNSSHFAAALSAEYGIGVRDGLFCAHPLVRTLLGSEPQAQGECGAPEAAPGERSLNAIRVSFGAGTPDEHVERFVRAVRELVEDGAKWSYRTEEGRCVPAV
>CP034350.1|AZM88829.1|2194736_2195801_-|anthranilate-phosphoribosyltransferase
MNVATPAGGDSVAARGWPGILEALLTRQDLVAEDTAWAMERIMRGEATDAQIAGFAVALRAKGETVAEYTGLVRTMYAHANVIEVPGRTVDIVGTGGDGAKTVNISTMSAIVAAGAGAKIVKHGNRAASSASGSSDVLEKLGVNLALTPQRVAQVAEEAGITFCAAVVFHPALRYAASARRDLGVRTAFNGLGPLTNPARVTAQAVGVADARLAPIMAGVLAGRGTSALVFRGDDGLDELTTTGTSRVWWVRDGEVTEHAFDPRDVGLGTVDISALRGGDPSYNADVARRLLAGETGPVRDAVLLNSASALVALDPGTGTLEEQLAAGMARAAESIDSGSARAVLDRWVAASNR

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Crispr_ID: CP034350_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034350_5

2308002-2308152

Orphan

Consensus_repeat	Method
CAGCCGCCGGACGCCGAGAAATGAGGAGCGCGTAGCGATCTGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034350_5

>merge|CP034350|5|2308002-2308152|CRISPRCasFinder
CAGCCGCCGGACGCCGAGAAATGAGGAGCGCGTAGCGATCTGACGCGCCCCTGCGCATCCCGCCCTGCTCTGCTCGTCCTTTCGCGGCGGTATCAGCCACAGGCAGCCGCCGGACGCCGAGAAAAGAGGAGCGCGTAGCGATCTGACGCGC

>CP034350|5|4|2308002-2308152|CRISPRCasFinder
CAGCCGCCGGACGCCGAGAAATGAGGAGCGCGTAGCGATCTGACGCGC	CCCTGCGCATCCCGCCCTGCTCTGCTCGTCCTTTCGCGGCGGTATCAGCCACAGG
CAGCCGCCGGACGCCGAGAAAAGAGGAGCGCGTAGCGATCTGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP034350.1\|AZM88912.1\|2308580_2309597_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP034350.1\|AZM88906.1\|2296727_2297453_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP034350.1\|AZM88914.1\|2311225_2312089_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
CP034350.1\|AZM88907.1\|2297482_2298007_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
CP034350.1\|AZM88910.1\|2306784_2307132_+\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM88916.1\|2313125_2314397_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270454
CP034350.1\|AZM93040.1\|2314697_2316386_+\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
CP034350.1\|AZM88911.1\|2307190_2307445_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM88908.1\|2298099_2303505_-\|pullulanase-type-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|273974
CP034350.1\|AZM88918.1\|2317581_2318469_+\|inositol-phosphorylceramide-synthase	unknown	unknown	gnl\|CDD\|379588
CP034350.1\|AZM88904.1\|2294737_2295634_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|378401
CP034350.1\|AZM88913.1\|2309581_2311174_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
CP034350.1\|AZM88915.1\|2312085_2313117_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP034350.1\|AZM88903.1\|2292600_2294532_+\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM93039.1\|2303541_2305242_-\|glycosidase	unknown	unknown	gnl\|CDD\|200456
CP034350.1\|AZM88917.1\|2316412_2317444_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP034350.1\|AZM88919.1\|2318696_2319290_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|223340
CP034350.1\|AZM88909.1\|2305924_2306710_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
CP034350.1\|AZM88920.1\|2319332_2322320_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237613
CP034350.1\|AZM88905.1\|2295630_2296674_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|99782

Protein	Function_ID	Function_description	E-value
CP034350.1\|AZM88912.1\|2308580_2309597_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.81638e-96
CP034350.1\|AZM88906.1\|2296727_2297453_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.75278e-14
CP034350.1\|AZM88907.1\|2297482_2298007_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.000708059
CP034350.1\|AZM88914.1\|2311225_2312089_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.3813e-83
CP034350.1\|AZM88919.1\|2318696_2319290_+\|dihydrofolate-reductase	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	7.59316e-20
CP034350.1\|AZM88916.1\|2313125_2314397_-\|extracellular-solute-binding-protein	gnl\|CDD\|270454	cd14751, PBP2_GacH, The periplasmic-binding component of the putative oligosacchride ABC transporter GacHFG; possesses type 2 periplasmic binding fold. This group represents the periplasmic component GacH of an ABC import system. GacH is identified as a maltose/maltodextrin-binding protein with a low affinity for acarbose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.54355e-149
CP034350.1\|AZM93040.1\|2314697_2316386_+\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
CP034350.1\|AZM88908.1\|2298099_2303505_-\|pullulanase-type-alpha-1,6-glucosidase	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP034350.1\|AZM88918.1\|2317581_2318469_+\|inositol-phosphorylceramide-synthase	gnl\|CDD\|379588	pfam14378, PAP2_3, PAP2 superfamily.	4.91866e-47
CP034350.1\|AZM88904.1\|2294737_2295634_+\|metal-dependent-hydrolase	gnl\|CDD\|378401	pfam10118, Metal_hydrol, Predicted metal-dependent hydrolase. Members of this family of proteins comprise various bacterial transition metal-dependent hydrolases.	1.75329e-91
CP034350.1\|AZM88913.1\|2309581_2311174_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
CP034350.1\|AZM88915.1\|2312085_2313117_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.86444e-95
CP034350.1\|AZM93039.1\|2303541_2305242_-\|glycosidase	gnl\|CDD\|200456	cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes AmyA proteins from bacteria, fungi, mammals, insects, mollusks, and nematodes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.15353e-166
CP034350.1\|AZM88917.1\|2316412_2317444_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.74501e-100
CP034350.1\|AZM88920.1\|2319332_2322320_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237613	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
CP034350.1\|AZM88909.1\|2305924_2306710_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	1.96325e-25
CP034350.1\|AZM88905.1\|2295630_2296674_+\|oxidoreductase	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	6.36759e-84

>CP034350.1|AZM88911.1|2307190_2307445_-|hypothetical-protein
MGIAKKGTRTIVVDGERYRWVVAADDEPGLGIVVVHDQVDGQRMVTWVEHGTVIAPGLVAGVIRRALERHGWTPRERGKQLTLR
>CP034350.1|AZM88910.1|2306784_2307132_+|hypothetical-protein
MNGRSWRRPRTVGPADARIDRRVRPLILRGVMRIRSAVTASVLAAGILLGGAGAALANDGVEIDYFDAGHKTYSSDCSTFAAVPHNLPAFAGPVYQSSCHKDGEKDWANGSHLGA
>CP034350.1|AZM88909.1|2305924_2306710_-|alpha/beta-fold-hydrolase
MIRLADDLGHLAYVVSGDGPAVVLVHAGVADHQMWDAVVPGLAERYTVIRHDLRGFGESAPPAGPYSDVDDLRRLLDHLGHERVRLVGASWGGRVAVDFTLAHPERVHSLALFAAPWPGYDWSAQMHAYDGAETAALAAGDVDAATQVNLDMWLRGPAREWADVAAGLADRVRGPMRTSLVNMGVRDQHGQGPGTSDLAGISVPTLVGVGKLDVADFQDIARRYAAEIPGATLVEFPTAAHLIALDAPDELAAQLSTFLAV
>CP034350.1|AZM93039.1|2303541_2305242_-|glycosidase
MSARAGRAALATAALAAVSLTVQAPQASAAPPGGKDVTAVLFEWRFADVAKACAGSLGPAGYGYVQVSPPQEHVQGSQWWTSYQPVSYKIAGRLGDRAAFKGMVDACHAAGVKVVADSVINHMAGPADPGATFTGTGGSAYSKYSYPGLYSGADMDDCRAEISNYQDKANVQNCELVKLADLDTGEEYVRGRIAGYLNDLLSLGVDGFRIDAAKHMPAADLANIKSRLSNPSAYWKQEAIHGAGESVSPAEYLPSGDVQEFRYARDLKRVFQSENLAYLKNFGEAWGYMPSGASGVFVDNHDTERNGETLTYKNGADYTLASVFMLAWPYGSPDVHSGYEWTDKDAGPPNGGTVNACYTDGWKCQHAWPEISSMVAWRNTARGQGVSDWWDNGGDQIAFGRGAKAYVALNHEATALTRTFQTSLPAGTYCDVQGGRAVTVDSGGRFTATLQPQTALALHTGARACTQASSAGASFAVNATTVPGQDVYVTGDRPELGGWNTAAALKLDPASYPVWKLDVTLPAGTSFAYKYVRKDASGNVTWESGANRNATVPANGKVTLTDTWRN
>CP034350.1|AZM88908.1|2298099_2303505_-|pullulanase-type-alpha-1,6-glucosidase
MIRPAAGAVAAALAVTLLPALPAAAAAQAPAPPSDAKLAAEPARHDLTREQFYFVLPDRFANGDPRNDRGGLAGGRLETGYDPTDKGFYQGGDLKGLTDRLDYIKGLGTTAIWLAPIFKNQPVQGRGADASAGYHGYWITDFTQVDPHFGTNADLERLVDKAHRKGMKVFFDVITNHTADVVDYREGSHEYLSKGAFPYLTKDGVPFDDSEYGDGRAGGKERFPAVDAGRSFPRTPFVPEGKKDAKVPAWLNDPAMYHNRGDSTFAGESSEQGDFSGLDDLWTERPEVVSGMEKIYQKWVKDYEIDGFRIDTVKHVNTGFWTQWATALDKYAAQRGRPDFFMFGEVYSADTAVTSPYVTRGRLDATLDFPLQDTLRAYASQGAPAGRLGSVLADDYRYTTDKANAYEQVTFLGNHDMGRFASFLKQDRPGAGERELLDRYRLANELMFLSRGNPVIYSGDEQGFTGSGGDKDARQPLFATRVADYLDDDQLGTARTHESDAYDPEHPLYTQISALSKLTKAHPALRDGIQSERLADGSAYAFARTDPKTRTEYLVAANNSGTARTVEVDAPPGASYRPLYGATGPGGTPYAAPAPVTASPAGKLTLNLPALGTVVLQATAPLPAPTAKPSLTLKAPAPGATGTVELSADLTPGTGPGALTRVVFAAQTGTGKWQVLGSADHAPYKVTHPIDQATPAGTPLRYKAVAVDSAGRTASALAASTTGQTPPPTPPTATQRDHAVVHYHRPDGDYTNWRLYAWGDLADGEATPWPEGHPFTGRDAYGAFAYVRLKPGASSLGYLVIDKDGNKDVAADRTLDLTRTGEIWLEQGQEPARTDRPAYPPQDQAKAVLHYQRPDGSHDGWGLHVWNGAATPTDWSKPLPPTRTDSYGAVYEVPLTPGATSLSYILHKGDQKDLPTDQSLDLKATGHEVWLLGGREKYLLPQPAGSSAALDLTKAEAVWIDRDTLAWNAPTTAASLQLLASRDGRITTDGGVLHEAGAQWLRLNRSALTPAQKQKFPHLAGYTAHTVDPRDRDRVREALRGQLVASARAANGAVLAATGVQLAGVLDDLYANDAPLGPAFEDGRPTLSVWAPTARQVALELDGRTVPMRRDDTTGVWSVRGDRSWTGKPYRYAVTVWAPSTRQIVRNLVTDPYSTALTTDSTHSLAVDLADPKLAPPGWKELRKPAPVPFTSAQIQELHVRDFSVADATTRHPGQYLAFTDTGSDGMRHLRDLAAAGTSYVHLLPAFDFGTVPEDPKARTEPACDLGAHAPDSEQQQACVAAAAAKDGFNWGYDPLHYTVPEGSYASDPNGTARTVEFRRMVQSLNGAGLRTVMDVVYNHTVASGQSDKSVLDRIVPGYYQRLLADGSVATSTCCSNTAPENAMMGRLVVDSVVTWARQYKVDGFRFDLMGHHPKANILAVRKALDGLTVAKDGVDGKKIVLYGEGWNFGEVADDARFVQATQKNMAGTGIATFSDRARDAVRGGGPFDEDPRVQGFASGLFTDPNGSPAAGTPAEQRARLLHAQDLLKVGLSGNLASYAFTDSAGRRTTGAGVDYNGAPAGYAAAPGDALAYADAHDNESLYDALAYKLPAGTSTADRARMQVLAMATAALSQGPALSQAGTDLLRSKSLDRNSFDSGDWFNALHWDCRDGNGFGRGLPPAADNRAKWPYAKPLLTGPAPGCAEITGASAAYRDLLRIRTTEPAFALTTAEAVQQRLSFPLSGPEETPGVLTMALGDLVVVFNATPADQRQRVPALAGAGYALHPVQAAGADAAVKRSAYDPATGEFTAPARTVAVFRRG
>CP034350.1|AZM88907.1|2297482_2298007_+|GNAT-family-N-acetyltransferase
MIIDDGILFRAAGEKDAATLAKLYDQAARWMLGRGIDQWKPGDKDAEHFRARMRDGEVWLAEDADGRLVGAYELWWSDEAAWGVQPPVAGYVHRLMVERKAAPPGTGMRILEHAEYRIARTGRERARLDCVSTNPKLLAYYRSAGYRVVGEFPSKVGKDGRVYGVILLERRLDV
>CP034350.1|AZM88906.1|2296727_2297453_+|TetR/AcrR-family-transcriptional-regulator
MTTGVRRRMGVEERRQQLIGVALELFSNRSPDDVSIDEIAAAAGISRPLVYHYFPGKLSLYEAALRRAADELAARFVEPQEGPLGPRLLRVMGRYFAFVDEHGPGFSALLRGGPAAGSSRANAMIDEVRQAAYEQILVHIGVQDPPARLELVVRSWVSLAESTALLWLDGRRIPRAELELQLVHDFAALAAVSAAYDAEMAGILVRILADEPADGPFGELVGRLAGLVPGTGPREREEPGD
>CP034350.1|AZM88905.1|2295630_2296674_+|oxidoreductase
MRRALAVTAVAGAAVLTRRALLKRIGRSPLWPLPALEDPVSGYSPRRTLHARITSRTEPAEGVLRLVLESDELPSWTPGAHVDLTLPSGLVRQYSLCGDPAEAGRWTIAVRLVADGRGGSREAHERLLEGTEVRVRPPRNRFELEPAPSYAFVAGGIGITPVLPMLRAATAAGADWTLLYGGRSRTSMPFLPELAAYGDRVTIAAEDETGLPDLAPLSGIRPGTLVYCCGPEPLMRAVTETVPAPDAVRLERFAAAAPAEAKPFTVELARTGTAVEVAADESALAAVRRVLPATPYSCEQGFCGTCRHRVLSGRVDHRDELLTDGERADSMLLCVSRADSDRLVLDL
>CP034350.1|AZM88904.1|2294737_2295634_+|metal-dependent-hydrolase
MSNRSPAPAPVASEHIDLAPRDVSFSWEDTPLHWLPGEPFAGHTINVLHLLLPAGERWFVHVYKQALPLITDERLRVDVIGFIGQEAMHAAAHDDVLPHLKRLGLDPTPYTAQVDWMFEKLLGDRTLPPGRARRWWLMERVAMIAAIEHYTAFLGDWVLNAKELDRRGADPMMLDLLRWHGAEEVEHRSVAFDLFMHLDGSYRRRVRTWASAFAALLFLWQRGARFFVENDPHRPGAKASYGQFLRAGRNGVLPSAGAMARSIPTYLSRTYHPSQEGSTAQAVAYLASSPGANGGVRP
>CP034350.1|AZM88903.1|2292600_2294532_+|hypothetical-protein
MLNVTAPDTATRPLPPDVEQAEAAIVEHYPRLVRLAYLVLPPSLGRNRRVLTAHSLTQRALPRGRRGAEPAAVQGGVPAQRGGLGGPESGYAYVRLRVLRSALEAGIPLTFKALPLRGQLPALLPQVWGLRLFPRAGGAEELALDQWLATLNGPGRAACVLRALEGLDGPEVLRVLAEAGVADPAAAVAESGDPAHDGLFSSPEFDPCVLQARPTDLLRRRRLARAGLAAAAALAVCGTLLALPGGGWGSDGPSAPPYARNAAAEQALDPGQLLRVAPTVWRTSSRTDYSAWPARGDRAQDAELLRRALAVWARPGREVVVSATPGTPSGPPMGPPQLLFAGTVDQAVVVLLYDGLRVVRYAEPRNGTAGAALDFARTDGATADTATALVLSRVDGNVRYLTAPWVTAAALRDLLKPGEEPAALKLTPDGVTPPVLGPAPSGDCTSWSALSLTGDGATRLVTDLGELTPARLTSGAPGAARDVTEAAELGEWSKTACLLPSVRSHGVRSVNAWTYAKQPLPEGDGTATWLCSRAETWRGTADRVQAQFLAPGAPLAAQAAKAEGSPACGTREPRVLAGVLWKSRAGQWYVLAAGSAQFASLSASGAGVSGSANGNRLALKAPEGAQVDLSGKLTDGSKAGALR
>CP034350.1|AZM88912.1|2308580_2309597_-|LacI-family-transcriptional-regulator
MVAGVSSPLRLTDIASQAQVSEATVSRVLNGKAGVAAGTRHRVLAAMDLLGYERPVRLKRRSNGLVGLLIPELTNPIFPAFAQVIEQALAGQGYTPVLCTQTPGGATEDELVEQLEERGVTGIVFLSGLHADSSADPARYQRLSSRGLPFVLINGFNEAISAPFVSPDDRAAAEMAVRHLEELGHRRIGLAIGPTRYVPSARKEQGFLAVRPGAAEEGLVQRTLFTVEGGHAAGGALLDRGCTGVVCASDMMALGVIRAARERGLRVPEDVSVVGFDDSPLIAFTDPPLTTVRQPVRAMATAAVGALLEAVAGTPVQRTEYVFQPELVVRGSTGMVRG
>CP034350.1|AZM88913.1|2309581_2311174_-|glycoside-hydrolase-family-13-protein
MTQHLADALPTPTGTQPGWWRDAVIYQVYPRSFADSNGDGMGDLEGIRSRLPYLRDLGVDAVWLSPFYASPQADAGYDVADYRAIDPMFGTLHDADAVIREAHALGLRIIVDLVPNHCSDQHEWFKQALREGPGTPLRERFHFRPGKGESGERPPNDWESIFGGPAWTRVEDGEWYLHLFAPEQPDFNWEHPAVQDEFRSVLRFWLDLGVDGFRIDVAHGLVKAAGLPDLGRDEQLKLLGNQVLPFFDQDGVHEIYRKWRTVLDEYAGDRIGVAEAWAPNVERTALYVRHDELHQAFNFHYLTTGWDAAALRATIDASLDAMRPVGAPTTWVLSNHDVVRHRTRFGSLDRARAAALLMLALPGSAYVYQGEELGLPEVTDLPDEVRQDPSFFKANGQDGLRDGCRVPLPWSGDAAPYGFGTGGSWLPQPEEWAGLSVEAQTGDPESTLELYRTALRIRREHADLGAGDAVEWLDAPEGVLMFRRGGFVCAANTTGEAVRIPGMTGAVLLASGELPEADVLPGDTAVWWQG
>CP034350.1|AZM88914.1|2311225_2312089_-|carbohydrate-ABC-transporter-permease
MTVTTNETQAARPRGSRSPLASFALHATLVVASVIAVFPVLWILLTSLKPAKYAITTDFVKEPTLSNYSHLLEDSHFLSWFWNSVLVAGVTTVLGVFIAATTGYAVSRFKFPGMKPLMWTLLITQMFPMAILIVPLYNLMGDLGLLNQPLGLIITYLTIAVPFCAWMMKGFFDTIPVEIDESGRVDGLNPFGTFWRLILPLAKPGLAVTGFYAFITAWGEVAYASAFMVGEENLTLAGGLQTFVTQYTSNWGAMSAASVLIAIPAAVFFLFAQRHLVAGMTAGATKG
>CP034350.1|AZM88915.1|2312085_2313117_-|sugar-ABC-transporter-permease
MAADTSRSVAKAADGETTLAARGPSRTTAKNAGSPRGGLRRALATHWYAWTMAAPVVLVLGVIVGWPLVRGIYLSLTNANERNVARTIGVRHIDATYEFVGLDNYTEVLGDPVFWQRLVWTVVWTVACVSLTFVLGLTLATMLNRQFRGRAAYRMALILPWAVPGFVSVFAWRFLFNRDNGILNKVLDGGGISAIPWLDDPTWAKLSVIAVNVWLGIPFMMVALLGGLQSIPGELYEAAEMDGAGPWQRFRHITLPGLRAVSMTVILLSTIWTFNMFPVIFLLTRGGPGDSTEILVTQAFREAFIASPRDFAGSATWGVLILGLLMIFALVYRRSLRKQGEVW
>CP034350.1|AZM88916.1|2313125_2314397_-|extracellular-solute-binding-protein
MRRGIAATALVATLALAATACGGDTKDDGGQKAGGELSGTVTWWDTSNDAEKASFQKIAEAFTAKHPKVTVKYVNVPYGDAQNKVKNAFSSGADAPDVIRADVGWVADFASLGYLDEVPADTAKKIDTEFLPQAAASGRFEGKTYAVPQVIDTLGLFYNKKMLADAGVQPPKTLEELKAAATAIKAKTGKTGLYLRGDDSYWFLPFIYGEGGDLVDAKTKTVTVDNAAGVKGFKAARDLVTSGAAVTNATDGWTNMQTAFKSGEVAMMINGPWAVADSYAGDQFKDKSNLGVAPVPAGSAKAGAPQGGHDLAVYAGSKNTAAAHAFVEYMTSQEVQVQSAKDLSLLPTRTAAYEQPDVKSSEMVQFFKPAVDKAVERAWIPENGSLFEPLKVEYTKAVTGASTPEDAAKAAGTEFRKILKGWK
>CP034350.1|AZM93040.1|2314697_2316386_+|glycoside-hydrolase-family-13-protein
MSGAWWRDAVIYQVYVRSFADSDGDGVGDLRGVRERLPHLARLGVDAVWLTPFYVSPQADGGYDVADYRAVDPLFGDLSDADDLVRAAHALGLRVIVDVVPNHTSQAHPWFRDALAGVPGARERYLFRPGRGADGELPPNDWESVFGGPAWTRVPDGDWYLHLFAPEQPDLDWEHPEVAAEFESVLRFWLDLGVDGFRVDVAHGMVKAPGLPDIGRGAQATLIGTEPLPFFDQDGVHAIHRSWRRLLDSYGDGRIGVAEAWAPSSERLALYVRPDELHQAFNFRFLNCPWDPAAMRTVIDESLAATASVGAPTTWVLSNHDVVRHVTRYGGGARGLARARAAALLMLALPGSAYVYQGEELGLPEVTDLPDAARQDPAFRRSPAGGRGGTGGGGAEAGAGEAEGQDGLRDGCRVPLPWSGEEAPYGFGPGGSWLPQPAGWAGLSVAAQTGDPHSTLELYRAALELRRAMPGLGAPESGQGGCREEWPGAGAGPAVFARGMRWRPAPDGVLLFTRPGFACTLNTRSTAVELPSPGRPVLSSAPVETDGRTVRLPPDSCTWWAM
>CP034350.1|AZM88917.1|2316412_2317444_+|LacI-family-transcriptional-regulator
MTARLADIAAQAGVSEATVSRVLNGKPGVAAGTRESVLAALDVLGYERPVRLRQRSAGLVGLITPELDNPIFPALAQVIGQALTRQGYTPVLATQTPGGSTEDELTEMLVDRGVSGIIFVSGLHADTTADMGRYDQLRAQGVPYVLINGFSDKVRAPFVSPDDRAAMQLAVTHLTALGHTRIGLAVGPKRFVPVLRKIEGFRAAMRDRLGLGEAEVEELVQHSLYTLEGGQAAAAALVGRGCTAVVCASDMMALGAIRAARQQGLRVPQDVSVVGFDDSPLIAFTDPPLTTIRQPVQAMGQAAVRTLLEEIGGTPAPHSEFVFLPELVVRGSTASGPAQRRTV
>CP034350.1|AZM88918.1|2317581_2318469_+|inositol-phosphorylceramide-synthase
MGEASVKTLETRTDVSSPTVTEHGTRPEPDAALLTRLRAPRRPRIWFEVLLIAVSYWTYSLIRNAVPEQKAAALANADWIWSVERGLGIAVEQSVNHAVNSVTWLVVGMNYYYATLHFIVTIGVLVWIYRFHPGRYAATRLVLFATTGVALVGYYFYPLAPPRLMNGGHFVDTVLVHHTWGSMASGNLKHMSNQYAAMPSMHIGWSLWCGLTIFAVASAPWARLLGLLYPAATLVVIVATANHFWLDAVGGVLCLAFGYTVSRAWYGSLPHRLPRRPVSTGPHPASDLLNRFRRA
>CP034350.1|AZM88919.1|2318696_2319290_+|dihydrofolate-reductase
MRIVVGEFISLDGVVQAPGGPEEDTDGGFAHGGWTHPFFDPEVMGGALAEWAAATDALLFGRRTWQTMAAAWPERAGDPFADHMNGVAKYVVSGTLGKSDLTWNNTTLIPAGEALAQVHKLREAEGRDLVVMGSASLARTLLSEDLVDELRLMIMPVVLGGGKRLFPDDGVLRTFDLAATVTTATGVHVSTYRRPTA
>CP034350.1|AZM88920.1|2319332_2322320_-|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MTVPGRRSSTFIRLLRSGFTDPTHAARLLDADALASVRADPVLLDALGATADPDLALHGLVRLAEAQTPEDLPRLLDTLVSAKPLRDRLLGVLGASEALADHLARHPRDWQALVTYEAADLHPGLAEFEQGLADAHDPVALRVAYRRCLLSIAARDVCGTIDLSQTAAELADLATATLRAALRMATAAAPEDAARCRLAVIAMGKCGGNELNYVSDVDVIFVGEAVPGAEEHKALQSATRLASHLMRICSETTVEGSIWPVDANLRPEGRNGPLVRTLSSHLAYYQRWAKTWEFQALLKARAVAGDPDLGAQYVAAITPLVWQAAERENFVADVQKMRRRVVDNIPAAQVDRELKLGPGGLRDVEFAVQLLQLVHGRSDATLHSGTTLDALHALAAGGYVGRADAAQLHDAYRFLRAMEHRIQLYRLRRTHLVPEDEADLRRLGRSLGLRTEPVAELGKAWRRHASVVRRLHEKLFYRPLLDAVAQLAPGETRLSPRAAGQRLEALGYADPASALRHLEALSSGVSRKAAIQRTLLPVLLGWFADSADPDAGLLGFRKVSDALGKTPWYLRLLRDEGAAAENLARVLSAGRLAPDLLMRAPEAVALLGDPEGLQPRTHEALEQEVLSAVGRAESGEAAVAAARGVRRRELFRTAAADIIASYGTEDSPAEKDCGALVDRVGDAVSDLTAATIAGALRAAVRDQWGETLPTRFAVIGVGRFGGHELGYGSDADVLFVHEPREGVDEQEAAKAAQTVIAEMRRLLQLPTADPPLLIDADLRPEGRSGPLVRTLSSYAAYYRRWSLTWESQALLRAEPVAGDIDLGNRFIELIDPLRYPAEGLGEDAVREIRRLKARMESERLPRGADPTLHAKLGRGGLSDVEWTVQLLQMQHAWAEPGLRTTRTRQALAAAHAAGLLPTEEAQILDEAWVLATRVRNAVMLVRGRAGDTFPSDARELAAVGRYLGYPEGKVGEMLDDYRRTTRRARAVVDELFYGA

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Crispr_ID: CP034350_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034350_7

3034927-3035021

Orphan

Consensus_repeat	Method
CCGCCGGTGGTGGTGCCGCCCGTCGTCGTACCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034350_7

>merge|CP034350|7|3034927-3035021|CRISPRCasFinder
CCGCCCGTGGTCGCGCCGCCGGTGGTGGTGCCGCCCGTCGTCGTACCGCCGGTGGTGGTGCCGCCCGTCGTCGTACCGCCGGTGGTGGTGCCGCC

>CP034350|7|6|3034927-3035021|CRISPRCasFinder
CCGCCCGTGGTCGCGCCGCCGGTGGTGGTGCCGCC	CGTCGTCGTACCGCCGGTGGTGGTG
CCGCCCGTCGTCGTACCGCCGGTGGTGGTGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP034350.1\|AZM89443.1\|3022769_3024113_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
CP034350.1\|AZM89447.1\|3027810_3028338_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
CP034350.1\|AZM89458.1\|3041139_3042429_-\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|236456
CP034350.1\|AZM89455.1\|3037762_3038464_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	unknown
CP034350.1\|AZM89450.1\|3030234_3031500_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
CP034350.1\|AZM89452.1\|3032659_3034177_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273342
CP034350.1\|AZM89445.1\|3025425_3026541_-\|dipeptidase	unknown	unknown	gnl\|CDD\|366534
CP034350.1\|AZM89448.1\|3028334_3029474_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP034350.1\|AZM89446.1\|3026635_3027814_-\|membrane-dipeptidase	unknown	unknown	gnl\|CDD\|366534
CP034350.1\|AZM89444.1\|3024117_3025419_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|378217
CP034350.1\|AZM89453.1\|3035599_3036691_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM89451.1\|3031510_3032188_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|223816
CP034350.1\|AZM89456.1\|3038602_3039781_-\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|237604
CP034350.1\|AZM89457.1\|3039808_3041149_-\|formimidoylglutamate-deiminase	unknown	unknown	gnl\|CDD\|236420
CP034350.1\|AZM89460.1\|3044194_3045538_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143505
CP034350.1\|AZM89459.1\|3042425_3044090_-\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
CP034350.1\|AZM89462.1\|3046688_3047057_+\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM89449.1\|3029683_3030220_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
CP034350.1\|AZM89461.1\|3045697_3046540_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
CP034350.1\|AZM89454.1\|3036687_3037746_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034350.1\|AZM89443.1\|3022769_3024113_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
CP034350.1\|AZM89447.1\|3027810_3028338_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	8.42474e-89
CP034350.1\|AZM89458.1\|3041139_3042429_-\|allantoate-amidohydrolase	gnl\|CDD\|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	1.95387e-175
CP034350.1\|AZM89450.1\|3030234_3031500_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.42274e-35
CP034350.1\|AZM89452.1\|3032659_3034177_+\|MFS-transporter	gnl\|CDD\|273342	TIGR00924, putative_Di/Tri_peptide_transporter, amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines].	2.75922e-171
CP034350.1\|AZM89445.1\|3025425_3026541_-\|dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	3.88668e-92
CP034350.1\|AZM89448.1\|3028334_3029474_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	1.55315e-174
CP034350.1\|AZM89446.1\|3026635_3027814_-\|membrane-dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	2.51233e-145
CP034350.1\|AZM89444.1\|3024117_3025419_+\|DUF2029-domain-containing-protein	gnl\|CDD\|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	5.56353e-07
CP034350.1\|AZM89460.1\|3044194_3045538_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143505	cd06836, PLPDE_III_ODC_DapDC_like_1, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Uncharacterized Proteins with similarity to Ornithine and Diaminopimelate Decarboxylases. This subfamily contains uncharacterized proteins with similarity to ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC). ODC and DapDC are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. ODC participates in the formation of putrescine by catalyzing the decarboxylation of ornithine, the first step in polyamine biosynthesis. DapDC participates in the last step of lysine biosynthesis, the conversion of meso-2,6-diaminoheptanedioate to L-lysine. Proteins in this subfamily may function as PLP-dependent decarboxylases. Homodimer formation and the presence of the PLP cofactor may be required for catalytic activity.	0
CP034350.1\|AZM89451.1\|3031510_3032188_-\|DNA-binding-response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.84725e-84
CP034350.1\|AZM89456.1\|3038602_3039781_-\|imidazolonepropionase	gnl\|CDD\|237604	PRK14085, PRK14085, imidazolonepropionase; Provisional.	0
CP034350.1\|AZM89457.1\|3039808_3041149_-\|formimidoylglutamate-deiminase	gnl\|CDD\|236420	PRK09229, PRK09229, N-formimino-L-glutamate deiminase; Validated.	0
CP034350.1\|AZM89459.1\|3042425_3044090_-\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
CP034350.1\|AZM89449.1\|3029683_3030220_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	4.03386e-28
CP034350.1\|AZM89461.1\|3045697_3046540_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	6.48419e-35

>CP034350.1|AZM89452.1|3032659_3034177_+|MFS-transporter
MASSLTKDSATPAPEKTFFGHPRGLATLFMTEMWERFSYYGMRALLVYYLVSGGADAATGSQGGGLAMTAATTTAIYSVYVSMVYLMAMPGGWFGDRVWGARKTVAIAGFIIMAGHLSLALPGQAMFFVGLILVAAGSGLLKANISTMVGHLYDGPDDPRRDGGFTLFYIGINLGAFVAPFVVGTIGKEHNWHLGFALAAVGMGLGLAQFLIGTKNLSPKSSQVPNPLTPEERKAVLTKGALVVVAVAVFYGAVVALGMYTLNWALVPLTLAGLLIPIAVLVRIKRDKDLSGAEQSKMTAYIWFFIAAAVFWMIYDQGGSTLSLFADSKTADTVFGFEFSATWYQSLNPLFVMALAPVFAWAWLWLARKNQEPNTIVKFAMGLVLIGASFFVFIVPMGMATGDTKVSPMWLVSIYMIQTIGELCVSPVGLSVTTKMAPQKYASQMMGVWFLAVTAGDCTTSLLSIAGVDLNGTWVIGFQAAAAALAGFAVYTYRKKVQALMGDVH
>CP034350.1|AZM89451.1|3031510_3032188_-|DNA-binding-response-regulator
MTRVLLAEDDASISEPLARALRREGYEVEVREDGPTALDAGLQGGVDLVVLDLGLPGMDGLEVARRLRAEGHGFPILVLTARADEVDTVVGLDAGADDYVTKPFRLAELLARVRALLRRGAGEASQAPATHGVRIDVESHRAWMGEEELQLTAKEFDLLRVLVRDAGRVVTRDQLMREVWDTTWWSSTKTLDMHISWLRKKLGDDAANPRYIATVRGVGFRFEKS
>CP034350.1|AZM89450.1|3030234_3031500_-|sensor-histidine-kinase
MRRRLINSTLAVVLVVIAVFGVSLVIVETRTITSSAQDRIGSEALRLLGIVEADALEHKPVDAGALAEQLDLGTYARITVPGRPVVEVGDRIEDSVIRGTARGEQGMHVVVEESRATVTKEVGRTLAVVGAVALLAVVAAVLLAVRQANRLASPLTDLAETAERLGSGDPRPRHKRYGVPELDRVADVLDSSAERIARMLTAERRLAADASHQLRTPLTALSMRLEEITVTDDLETVREEASIALTQVERLTDVVQRLLTNSRDPRTGSAVPFDLDEVVKQQVEEWRPAYRSAGRAVVRSGKTGMRAVGTPGAVSQVLATLVENALMHGGGTVALRTRVTGNQAVIEVTDEGPGVPPDLGNRIFERAISGRNSTGIGLAVARDLAEADGGRLELLQSRPPVFALFLSRTAPERAEPERTVR
>CP034350.1|AZM89449.1|3029683_3030220_+|GtrA-family-protein
MSSTPNAVPLSERLRGLAREAVKFGAVGGAGVLVNFGVFNLLRNTTDLQTVRANVIAIVVAIITNYVGFRYFTYRDRDLGSRRREMLLFVLFSGIGMVIESGVLYVGTYGFGFDGSLANNVFKFVGMGVATVFRFWSYRTWVFKALPTPAAHSLVVEQRDGHEEPATPRTPEPAANQG
>CP034350.1|AZM89448.1|3028334_3029474_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MTFPVVGMVGGGQLARMTHEAGIPLGIRFKILSDTPQDSAAQVVSDVVIGDYRDLETLRAFARGCDVITFDHEHVPTEHLRALESDGIPVRPGPDALVHAQDKGVMRAKLDEIGAPSPRHRIVSDPADVAAFAQEVGGFPVILKTVRGGYDGKGVWFVRTPEDAEAPFKAGVPVLAEEKVDYVRELAANIVRSPHGQAVAYPVVESIQVDGVCDTVIAPAPDLSEALGGEAQALALRIAKELGVTGHLAVELFETTDGRILVNELAMRPHNSGHWTQDGAVTSQFANHVRAVLDLPLGDPRPRARWTVMANVLGGDYPDMYAGYLHCMAHDPQVKIHMYGKDVKHGRKVGHVNAYGDDLDDVLERARHAAGYLRGTITE
>CP034350.1|AZM89447.1|3027810_3028338_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSTSPVVGIVMGSDSDWPVMEAAAQALDEFEIPYEVDVVSAHRMPREMVAYGEQAAGRGLKAIIAGAGGAAHLPGMLASVTPLPVIGVPVPLKYLDGMDSLLSIVQMPAGVPVATVSVAGARNAGLLAVRMLAAHDPELLGRMREFQQELNDQATEKGKRLRTKVAGSGSFGFGK
>CP034350.1|AZM89446.1|3026635_3027814_-|membrane-dipeptidase
MSAADLLAQARELLTEYPVVDGHNDLPWALRQQVRYDLDRRDIAGDQSDHLHTDLPRLRAGGVGAQFWSVYVRSDYSGDEAVSATLEQIDAVGQLITRYPDSLVRALTADDMEAARAEGRIASLMGAEGGHSINNSLATLRALHQLGVRYMTLTHNDTIDWADSATDEPRHGGLTRFGREVVREMNRIGMLVDLSHVAATTMRDALDTSRAPVIFSHSSARAVCDHPRNVPDDVLERLPGNGGVAMATFVPKFILPAAVEWTLAADENLRAHGFHHLDTTPEAMALHREFEAARPRPVATAATVADHLDHMREVAGIDHVGIGGDFDGTAFTPAGLDDVSGYPNLIAELIGRGWSRADLAKLTWSNAVRVLRDAESTSRALSATTGPSNAHP
>CP034350.1|AZM89445.1|3025425_3026541_-|dipeptidase
MAAPSLPAAAETGATAMADLQDEPHSVGVGAEDVPAPAFTGGALDRAAELLAVHPVADGCNTLVWTLRQSPYHDIDTPDTGVDTDIPRLRAGGVGAQFWTLLVPPGRPRPDAAADQVVSDTLEQIDVARSLMRRYPDSLCLALSADDMADARNRGRIASFLGPVPGSTLTDSLGALRAFHALGVRLLAPAGAPWAEEGLTAFGHEVVKEVNRLAMLLDLTGCPPAAACQLAAASKAPVIISNTGAAALNPHPGNVTDEVLLALRAANGLAMVTFDTARTGDSLHAVADHLDHVRAIAGPEGVGLGAAFGAERGGPRPAGLADPSGYPHLIAELLERGWTESDLALLTWGNAQRVLRDAEFTARAAQHRRAP
>CP034350.1|AZM89444.1|3024117_3025419_+|DUF2029-domain-containing-protein
MTTTSSLPADPAAPATAPGPAAHRRRTSFEAAARGRGALAGIAGFWLASRAAMLWMLVNDFFSSNLVRVEVTATYHNWYDVLSTWTLPQNDIMWQYPPAAAAVFLSPDLLPFLTYFQAFVALTVLCDGVVLLGLVRAARRSDGSMAGALLWLAALPMMMATPFARYDIQVTLLAVFALLALRSRPRAGGVVAGIGAMVKVWPLLTLLGTPRGRSTRDAVVAAALSCVALLAVFAALFSDTLGFLGNQGDRGVQVESLGGSVLMAARFLDLWPGWIDFQYGAFEYIGPYVADIARASLALTLAGFLLLLLWRVRANHWTSATPFDAALCAILVFTVTSRVISPQYMIWLLGLAAVCLTSRNTTQRPVAWLLVAANALTTLIFPVWYADILATSALGTALLCLRNGLLLYATVWSVVRLWKATVRRGPAPEAAAA
>CP034350.1|AZM89443.1|3022769_3024113_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MAPLKITVIGTGYLGATHAAAMAELGFEVLGLDVVPEKIAMLEAGRAPMYEPGLEELLARHVAGLPGSTGRLRFTRSWEELGAFGDVHFVCVNTPQKHGEYACDMSYVDAAFESLAPHLNGPALVVGKSTVPVGSAARLAAKLAELAPAGADVELAWNPEFLREGFAVQDTLHPDRIVIGVRGERGEKLLREVYETPMSEGSPLVVTDFPTAELVKTAANSFLATKISFINAMAEVCEAAGGDVVKLAEAIGHDERIGAKFLRAGIGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRGHMVELAREAVGGSFLGKRVAVLGATFKPDSDDVRDSPALNVAGQIHLQGGQVTVYDPKGMDNARRVFPTLGYADSALAAARGAEVVLHLTEWREFRDLDPAELGAVVTDRLVLDGRNALDPVRWRAAGWTYRAMGRPQA
>CP034350.1|AZM89453.1|3035599_3036691_-|hypothetical-protein
MSRTAGAKAASPLGAALAALALALLPLLAAGAPAAAAEGKPTAALSLQEAAKGTEITVTGTGWRPKTLVMLLVCGQNMIGGTNSCANADGTAVSVTDDGRFTARLPVAEPPKPCPCVVNVTSVNGDQSTVAVPVRITGHPVADLPAESGTARLAMLTGVRLRGEDGVLTWFGAPPGRTFTATVGNLGSAPVKDPVFQLGTARGVFAPVWEEARWKGTIPPGGKAEVALEVALPAGAHGDYTVSLKYGDTVLAAQPWGVDRPYGVLLFWGLLLVVIPTALFRAGMAVVDRVRPRAGTPGRHRGPKAAPDPAAVTARLPRVTAAGAAGARPPALPWFTPQPEPRDAGPPQTSAPSDHSPTTKGPS
>CP034350.1|AZM89454.1|3036687_3037746_-|hypothetical-protein
MPPIPARRGRRLLAAALLAAATLHAAPAAAVSAGPATAAGPAAPAEPAGPGWTAAPATARPGAARPYFYLAGPAGTVLEDRLALDNPGDREYTVTLRGADADNAPDGALAVRPAAPGASGAGSWISFGGSATVRLPPRTRAVVPFTVTVPAAAPPGDHPAAVVAGGPGRETGVRIHLRVDGPAVAALTVEDVSVRGHGPATTVDYTLVNRGNVTLTPALALRAEAALHEPAGRPARALPVELLPGRRARLSEPWPDAPALDRVALTLTATAPGAAPATAEAEAWLAPGGATGLAAGALLALAGTALAALLLVRARRTRRTATREAPTQGDAAADDHEPTGPTLLTELTGAPR
>CP034350.1|AZM89455.1|3037762_3038464_-|LPXTG-cell-wall-anchor-domain-containing-protein
MSDRKRSTALAPALALALAGSAVLLAAPAAHADVVDVEYKCQTPIGDKSAVSPIDIKAVKEGDGYKLTMSFQKGVSSSPIELGKGAMNPSAVIMTDGAEKVSVPVSGPPNPEAVPANTPIRITDLSGTYTPKKSGKVTFTAGVLTIKAMGTTTTCNPGNSPKPSLETDVTAAGGGAPQTGGDGGGGGGDTLPQTGPADSALALGTLGATVLLSGAAGVLWLTRRGRQPQRTRP
>CP034350.1|AZM89456.1|3038602_3039781_-|imidazolonepropionase
MSTTLITRIGSLVTNDPAQGDGTPLGLIEDAALVIDGDTVVWTGPAASAPAADASFDAQGRAVIPGFVDSHSHLVFAGDRTAEFNARMSGRSYSAGGIRTTVAATRAATDAELEANLLRHLDEARRQGTTTFETKSGYGLTVADEARALRIASQHTEEVTYLGAHIVSPDYADDPAGYVGLVTGEMLAACAPYARWVDVFCEKGAFDGDQARAILTAGAAAGLIPRVHANQLSYGPGVQLAVELEAASADHCTHLTDADVDALAQAAGTTVATLLPGAEFSTRAQWPDARRLLDAGATVALSTDCNPGSSYTSSMPFCIALAVRDMGMTPDEALWAATAGGARALRRNDIGRLAPGARADLALLDAPSHVHLAYRPGVPLVSAVWQRGVRAA
>CP034350.1|AZM89457.1|3039808_3041149_-|formimidoylglutamate-deiminase
MPLKTYWLEHAWLGAAVEPGVTLEVSADGRIAALRTGTDTPPPGAEVLRGLTLPGLANAHSHAFHRALRSAVQVGSGTFWTWRDVMYKVAQNLTPESYHDLARAVYAEMALAGITNVGEFHYVHHAPGGTPYADPNAMGEALIEAAAAAGIRITLLDTAYLSSGFGEAPNEHQKRFSDGTADAWAERVSALKPREHALIGAAVHSVRAVPAGQLATVAGWAQDRRAPLHVHLSEQTAENDACQAAHGRTPTQLLADHGVLGPRTTGVHNTHLTDADIALLGGTTTGTCMCPTTERDLADGIGPAGLLQRAGSPLSLGSDSHAVIDLLEEARAMELNERLASRTRGHWTANALLRAATEDGHAALGLPDAGRLETGALADFTTVALDSVRTAGPPPRLGAETAVFAASAADVRHTVVAGRHVVRDGHHTLVGDVAGALAAAIAAVRD
>CP034350.1|AZM89458.1|3041139_3042429_-|allantoate-amidohydrolase
MTEGSARTGGSAPAPRGSAPGGPAAGAGGSFHAMWDELRPIGRDSGSGGYRRYAWTGADTDCRAWFRGQAEARGLAYEVDRNGNQWAWLGDPLAGDAVVTGSHLDSVPDGGAFDGPLGVVSSFAALDELRARGTALTRPLAITNFGDEEGARFGLACVGSRLAAGQLTKEKAYELRDADGVSLPQAMEAAGYDPGSIGADPERLSRIGAFVELHVEQGRALDLSGDRVGIASAIWPHGRWRFDFHGEANHAGTTRLVDRRDPMLTYAETVLAARREAALAGAVATFGKISVEPNGVNAIPSLVRGWLDSRAADQATLDTVVTAVEKAAREHADRDGIDLNVVRESFTPVVEFEHALRDELNRILGGSVPVLGTGAGHDAGILSASVPTAMLFVRNPTGVSHSPREFAAEDDCVAGVLALADVLEGLACR
>CP034350.1|AZM89459.1|3042425_3044090_-|urocanate-hydratase
MSGPRPVRAARGTELSTLGWQQEAALRMLQNNLDPEVAEHPDKLVVYGGTGKAARDWRSFDAMVRTLRTLKQDETMLVQSGRPVGVMQTHEWAPRVLLANSNLVGDWANWEEFRRLEHLGLTMYGQMTAGSWIYIGTQGILQGTYETFAAVAAKKFGGTLAGTITLTAGLGGMGGAQPLAVTMNDGVAICIDVDPRAIERRIEHRYLDVKADSLAHALQLATEARDARRPLSIGLLGNAAELLPQMLAEGAPIDIVTDQTSAHDPLSYLPVGVDFEDMADAAAKDPAGFTTRARESMARHVEAMVGFMDAGAEVFDYGNSIRGEAQLAGYDRAFAFPGFVPAYIRPLFCEGKGPFRWAALSGEASDIAKTDKAMLELFPENESLHRWLKMAGERVHFQGLPARICWLGYGERDRAGERFNDMVASGELAAPLAIGRDHLDCGSVASPYRETEAMLDGSDAIADWPLLNAMVNVASGASWVSIHHGGGVGMGRSIHAGQVTVADGTPLAGEKIRRVLTNDPGMGVIRHVDAGYDIAEDVADERGVRVPMREGDSA
>CP034350.1|AZM89460.1|3044194_3045538_+|diaminopimelate-decarboxylase
MAADTHAQGAAQRRDRAVRAAVEQGLLDREPVVCLLDVAGIRASAAALTEAFAAAVAPGTPVLHTFAVKAAPLVPVLRLLDGCGLGCEAASPGELALVRAAGVPAERTVLDSPAKTAAELRGALALGIAVNADNHQELERLDALVAAAPTRSPVGLRINPQTGAGSIGALSTATATSKFGFALRDPGARERLVRAYAERPWLTRLHIHSGSQGVPLELIAEGVRELHGLAGEINAAAGERRVDTLDIGGGLPVDFTSDAHAPSYAEYVAALRAAVPALFDGSYGLVTEFGRSLLAKHGLVLARVEYTKTTGGRRIALTHAGVQLATRTVYAPAAWPLRILAYDAQGAPRTGPPLTQDVAGPACFAGDLLAAARELPELFPGDVIAVPDTGAYAFTAHYGYNSLPRPAVHGFTTDGPGGGLRFTLARRAQSPSEIVAEAGGDHADALL
>CP034350.1|AZM89461.1|3045697_3046540_-|MurR/RpiR-family-transcriptional-regulator
MNDSPAARLQRLFEGHRLTPTQRRIAHCMVRGAAEVPFLSSVELAELAGVSQPSVTRFAVALGFDGYPALRRHLREVAPAGRPEPAREGEYNEYQQAVQGEIENLQRLSAMLADPAPVEEAGRVLAASAPLPVLGLRAASSQARGFAYFAAKVHPDVRLLDEGGSMLADRIDAAAAAGASALLCFALPRHPREVVEALEHARAAGLTAVTVADSAFAPVARHSDLLIPAPVGTGLAFDTACAPMLLGRVLLEAMADALPDAQARLEDFDARAAARGLFVE
>CP034350.1|AZM89462.1|3046688_3047057_+|hypothetical-protein
MTELKKELAATLEARRELGPEYEAALVDSFVDKVDTQVRRRLAEERLLQVRGGTAGQGPAGSVSAFGERFGFAIVTLVLAVPLSAIGVTQGIGGLVATWAGIVGVNLAHAGRLRRPGRDPRA

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Crispr_ID: CP034350_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034350_8

3777680-3777751

Orphan

Consensus_repeat	Method
TGTTTCACGTGAAACATCGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034350_8

>merge|CP034350|8|3777680-3777751|CRISPRCasFinder
TGTTTCACGTGAAACATCGCCGCCGTCGCCGTTGCCGTCACCGGGACGGTGTTTCACGTGAAACATGGCCGC

>CP034350|8|7|3777680-3777751|CRISPRCasFinder
TGTTTCACGTGAAACATCGCCGC	CGTCGCCGTTGCCGTCACCGGGACGG
TGTTTCACGTGAAACATGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP034350.1\|AZM90052.1\|3769687_3771406_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270875
CP034350.1\|AZM90054.1\|3776207_3777659_+\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|131739
CP034350.1\|AZM90063.1\|3788555_3789143_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236092
CP034350.1\|AZM90060.1\|3785300_3786332_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
CP034350.1\|AZM90047.1\|3764611_3765694_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
CP034350.1\|AZM90053.1\|3771523_3773707_-\|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl\|CDD\|273763
CP034350.1\|AZM93186.1\|3767991_3768945_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
CP034350.1\|AZM90064.1\|3789185_3789422_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
CP034350.1\|AZM90061.1\|3786366_3787485_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|367067
CP034350.1\|AZM93188.1\|3787616_3787928_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM90051.1\|3768959_3769661_-\|RNA-polymerase-sigma-factor-SigM	unknown	unknown	gnl\|CDD\|236604
CP034350.1\|AZM90050.1\|3766884_3767844_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
CP034350.1\|AZM90059.1\|3783789_3785274_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|227937
CP034350.1\|AZM90062.1\|3788192_3788483_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
CP034350.1\|AZM90058.1\|3781108_3783700_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
CP034350.1\|AZM90057.1\|3780233_3780836_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
CP034350.1\|AZM90049.1\|3766495_3766834_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
CP034350.1\|AZM90048.1\|3765781_3766405_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP034350.1\|AZM90056.1\|3779100_3780183_-\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
CP034350.1\|AZM93187.1\|3773753_3775946_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034350.1\|AZM90052.1\|3769687_3771406_-\|serine/threonine-protein-kinase	gnl\|CDD\|270875	cd13973, PK_MviN-like, Pseudokinase domain of the peptidoglycan biosynthetic protein MviN. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. This family is composed of the mycobacterial protein MviN and similar proteins. MviN is an integral membrane protein that is essential for growth and is required for cell wall integrity and peptidogylcan (PG) biosynthesis. It comprises of 14 predicted transmembrane (TM) helices at the N-terminus, followed by an intracellular pseudokinase domain linked through a single TM helix to a carbohydrate binding extracellular domain. Phosphorylation of the MviN pseudokinase domain by the PG-sensitive serine/threonine protein kinase PknB recruits a forkhead associated (FHA) domain protein FhaA, which modulates local PG synthesis at cell poles and the septum. The MviN pseudokinase forms a canonical receptor kinase dimer.	1.39604e-55
CP034350.1\|AZM90054.1\|3776207_3777659_+\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0
CP034350.1\|AZM90063.1\|3788555_3789143_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	4.39944e-89
CP034350.1\|AZM90060.1\|3785300_3786332_-\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	2.47785e-06
CP034350.1\|AZM90047.1\|3764611_3765694_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.06658e-69
CP034350.1\|AZM93186.1\|3767991_3768945_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00480976
CP034350.1\|AZM90058.1\|3781108_3783700_+\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	6.28653e-140
CP034350.1\|AZM90064.1\|3789185_3789422_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	5.36969e-37
CP034350.1\|AZM90061.1\|3786366_3787485_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	3.03752e-36
CP034350.1\|AZM90053.1\|3771523_3773707_-\|murein-biosynthesis-integral-membrane-protein-MurJ	gnl\|CDD\|273763	TIGR01695, Putative_lipid_II_flippase_MurJ, murein biosynthesis integral membrane protein MurJ. This model represents MurJ (previously MviN), a family of integral membrane proteins predicted to have ten or more transmembrane regions. Members have been suggested to act as a lipid II flippase, translocated a precursor of murein. However, it appears FtsW has that activity. Flippase activity for MurJ has not been shown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.7749e-134
CP034350.1\|AZM90051.1\|3768959_3769661_-\|RNA-polymerase-sigma-factor-SigM	gnl\|CDD\|236604	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed.	3.26976e-92
CP034350.1\|AZM90050.1\|3766884_3767844_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	9.76142e-157
CP034350.1\|AZM90059.1\|3783789_3785274_+\|DUF2029-domain-containing-protein	gnl\|CDD\|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	7.00224e-37
CP034350.1\|AZM90062.1\|3788192_3788483_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	4.67246e-41
CP034350.1\|AZM90057.1\|3780233_3780836_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	4.50992e-17
CP034350.1\|AZM90049.1\|3766495_3766834_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	2.62773e-47
CP034350.1\|AZM90048.1\|3765781_3766405_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.12759e-05
CP034350.1\|AZM90056.1\|3779100_3780183_-\|inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0

>CP034350.1|AZM90054.1|3776207_3777659_+|CCA-tRNA-nucleotidyltransferase
MPNANEDNPSALSQVQRRAVSELLRVAPVADELGRRFQEAGFRLALVGGSVRDALLGRLGNDLDFTTDARPEAVLKIMRPWADSLWDVGIAFGTVGAQRDGFQIEVTTYRSEAYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMALALPEQEFVDPHGGLEDLAAGVLRTPGTPEDSFSDDPLRMLRAARFAAQLDFEVAPEVVSAMKAMSDRIEIVSAERVQGELNKLLLSAHPRKGLGLLVDTGLADRVLPELPALRLERDEHHRHKDVYDHSLIVLEQAIDLEEDGPDLVLRLAALLHDIGKPRTRRFESDGRVSFHHHEVVGAKMTKKRMTALKYSNEMIKDVSRLVELHLRFHGYGDGEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKANALSRTYDGLEERIAQLQEQEELDAIRPDLNGNEIQQILEIGPGPMVGKAYAFLLELRLENGPMGREAAVAALKEWWAAQAAQA
>CP034350.1|AZM93187.1|3773753_3775946_-|hypothetical-protein
MLSGTPVLAALIYAPAPAAHAADSPVDVQLTEVSPNAPIKSDTLTISGTVVNNGSETIKNAHVGLRVGPRLGDRSAIGEVSDRKGFRPGVDPGEIDPAFAVKIDSLTSKVGRQFTIKVPVNKLDLGADGVYQLGVSLSGATDSRPHEQVLGIQRTFLPWQPDPAAKRSSLTYVWPLISTTHVTAETGSDELQTPVFLDDSLADELRPGGRLERMVALGKDLPVTWVIDPDLLTAVDAMTKGYRVRSPNPDGKPVQGRNRAVAEQWLSALEAAVQGKKVVALPFADPDIASLAHHGKDVSGTLGQLRPATDKAKQAVETVLHVPASTDFSWPVDGAIDPAIVNVATSAGAHNVLARSDSLQETGALGYAPTAARPIGAGTTAVVADADLSTAFEGDMSAAGSSTLAVQRFLAHSLALNLQNSDEPRSYVVTPQRRPTASQADSMAVALRGLQPARWTQPSDLEAAAAAKPDPGAATQVPGAGQYPEALAKQELPVSAFEKIRTTQSTLDHFKVILSAPDRVEIPFGNTTNREMSTSWRGRPEEAAAYRDQVQAYLIGLTDKVKVVPKSDATLSGHSATIPVSVQNSLVQDVHNLVLRVKSANPTRLMFGDSGEAEQEVTVQGGHSQTVKFTANATASGPVEVSARLYTKDGVPYGKERKFTVEATEITPTVMLVIAGGVLLLVLAGIKMYASRKRVAARAAAEESTQPSDESTDTGPQSTKGSGTGETVDR
>CP034350.1|AZM90053.1|3771523_3773707_-|murein-biosynthesis-integral-membrane-protein-MurJ
MNAPYDGDRAQGTGGPTPSQGTAPGAQVPGQVPAPAPAQDHDPYVQDAYDYDPYRSQDLSAQDPVTEALYDRASHPPPAPGTYQEAGPLYAAPQAPSHGPDPRVWAQTPPPEPDGPSRHLPYGDHAATTQFVGVDSLVTRASEEEPEPDAFTHLYRDQQAAPGVAGPAAEDAPVAAPAPAKPAGKAASLLKSSALMAAGTIVSRITGFGRTLVIAGAIGVATLNDSYQVANTLPTMIYVLVGGGALNAVFIPQLVRAMKNDDDGGEAYANRLLTLVITLLGAVTTVCVLAAPLFIRMMSPTIADDPKRLDVAVAFAHYCLPTMFFMGVHVVLGQILNARGRFGAMMWTPVLNNIVVIATFGAFIWAFGGFTTSGVSEGTITPEGVRLLGLGTLLGLAVQSLAMLPYLRDAGFKPRLRFDWKGHGLGKAAGLAKWTFFFVLANQIGLVVVTQLATAAGTAAEKQGHGGTGITAYNYALLLWQMPQAIITVSVMTAVLPRISRSAHDGDAAAVRDDISYGLRTSAVAIVPCAFAFLALGVPMATLLYASAGKDALNIGYVLMAFGLGLIPYSVQYVVLRGFYAYEDTRTPFYNTVIVAAVNAGVSALAYFVLPARWAVVGMAAAYGLGYVVGVGVAWRRLKARLGGDLDGAHVMRTYTRLIGACVPAAAVGGAAAYGVMRVLGSGALGSVAALVAGGIALAAVFLLAAKRMRIEELNSMVGMVRGRLGR
>CP034350.1|AZM90052.1|3769687_3771406_-|serine/threonine-protein-kinase
MAERSTAAVDVAHNSGEQPLAADAAKATADGVDAKNGKASDGPVPEKDGERPAAAPAAAPELHSGHKLARRYRLEECVTRLDGFSSWRAMDEKLRRAVGVHLLPADHPRARSVLAAARSSALLGDPRFVQVLDAVEENDLVYVVHEWLPDATELTSVLAAGTLEPHEAYQLVSQVSQAMAAAHREGLAHLRLTPSAILRTSTGQYRIRGLAVNAALRGITSDTPQRADTEAIGALLYASLTQRWPYENDAYGLRGLPKGVGLLAPDQVRAGVHRGLGELAMRALANDGATASRQEPACTSPEELAKAVAEMPRIRPPEPAFTAPPEYQHTTYQQGTYGRPAPVGLPTTQAVPPVPPPPLQSRTGRALKWGVAALLIVALGLGSWQLADTLLDHGKSGGDNTQTQQQGPNDTAQKKEPVPLSIKGAQEYAPDGSPQNAGLVAKTYDGDTSSYWRTRSYDDGPEFKIKDGVGIVYDLGSEQEVGEASIALKYPGDHTTLTLYAADSMRPSKGGVGSMKKIAATTTKDTGVKLTAEKPVKTRYVLVWITAMPFAEYEDFSKAGYKQGISDVKFKG
>CP034350.1|AZM90051.1|3768959_3769661_-|RNA-polymerase-sigma-factor-SigM
MDDAAAGEHSDQDLLSLHVAGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALVSAYRAAHTFRGDSAVTTWLHRITVNACLDRARKAASRRTAPLDDTDRLERLLEPHESAEAPAERQDLHRQLLAALSTLPAEQRAALVLVDMQGYPVAEAARILDVPTGTVKSRCARGRAKLLPMLTHLRTDAGDNTTSERGRNRTPGTAVPPAADTRNPEPDPDAVKGGGGRP
>CP034350.1|AZM93186.1|3767991_3768945_-|hypothetical-protein
MTGTAGTTWHPEVSEISDLTEGLLPPSRSSEVRRHLGNCALCADVLASLEEIRSLLGTLPGPPRMPSSIAGRIDAALAAEALLDSTTPRAEAPVSEPHPADDVSRETSPATTGGSGRNEAHRPTGHPSGPTGPGRRRARRRIAVLTGLAGAAACALAVVLFNGLGGTGSHDTATRNDTARASADAATPGEYTAQGLGQNVRQLLAGEAAANTPKTAPGETDRSMGLQEASPGLAPADRLPSPAPAAVPPCVQQGTGRSEPPVAAERGSYQGTPVYLVVLPHPGDPARVDAYLVPAGCADNPAQTPDKPLLTSTYPRN
>CP034350.1|AZM90050.1|3766884_3767844_-|thioredoxin-disulfide-reductase
MSDVRNVIIIGSGPAGYTAALYTARASLNPLVFEGAVTAGGALMNTTEVENFPGFRDGIMGPDLMDNMRDQAERFGAELVPDDVVAVDLTGEIKTVTDTAGTVHRAKAVIVTTGSQHRKLGLPNEDALSGRGVSWCATCDGFFFKDQDIAVVGGGDTAMEEATFLSRFAKSVTIVHRRDSLRASKTMQDRAFADPKIKFAWDSEVAEIHGEQKLSGLTLRNTKTGETSELPVTGLFIAVGHDPRTELFTGQLDLDDEGYLKVDAPSTRTNLTGVFGAGDVVDHTYRQAITAAGTGCSAALDAERFLAALADTEPAAATV
>CP034350.1|AZM90049.1|3766495_3766834_-|thioredoxin
MAGTLKNVTDADFDDVVLRSDKPVLVDFWAEWCGPCRQIAPSLEAIAAEHGDQIEIVKLNIDQNPGTAAKYGVMSIPTLNVYQGGEVVKTIVGAKPKAAILRDLSDFVEVQA
>CP034350.1|AZM90048.1|3765781_3766405_+|GNAT-family-N-acetyltransferase
MGRRLVPLTLDNLQDLPRRCRSCVFWELDPVTGEAAVKAGTPELEKEAWISAVLLDWGSCGRVVYVDEVPVGFVLYAPPAYVPRAASFPTSPVSPDAVQLITAWIMPGYQGQGLGRVMVQTVAKDLLRRGFKAIEAFGETRWERPACLLPADHLLSVGFKTVRPHPSHPRLRLELRTTLSWKEDVELALDRLLGGARARKEPALRPL
>CP034350.1|AZM90047.1|3764611_3765694_+|ParB/RepB/Spo0J-family-partition-protein
MSERRRGLGRGLGALIPSAPQEKTPVVGTGSANPSAVPVLPSERGIAAAKLAALVQADVSRETSVPVEPAAAEPAGNEVAGATFAELPLDAISPNPKQPRNMQHLDEDALAELVTSIQTVGLLQPVVVRETEPGRYELIMGERRFRACGLAGLESIPAIIRATDDDKLLLDALLENLHRVQLNPLEEAAAYDQLLKEFNCTHDQLADRIGRSRPQVTNTLRLLRLSPDVQLKVASGVLLAGHARALVSVEDFGEQLRLAERIVAEGLSVRSVEEIIQLMGSEPSSTVKPKGPRAGARVSPALSELATRLSDRFETRVKVDLGQKKGKITVEFASMEDLERILGTLAPGEGRVLEQGLSGE
>CP034350.1|AZM90056.1|3779100_3780183_-|inositol-3-phosphate-synthase
MGSVRVAIVGVGNCAASLVQGVEYYKDADPASKVPGLMHVQFGDYHVGDVEFVAAFDVDAKKVGLDLSDAIGASENNTIKICDVPNSGVTVQRGHTFDGLGKYYRQTIEESAEAPVDVVQILKDRQVDVLVCYLPVGSEEAAKFYAQCAIDAKVAFVNALPVFIAGTKEWADKFTEAGVPIVGDDIKSQVGATITHRVMAKLFEDRGVRLERTMQLNVGGNMDFKNMLERERLESKKISKTQAVTSQIPDRDLGEKNVHIGPSDYVAWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDALRAAKIAKDRGIGGPILSASSYFMKSPPVQYFDDEAYANVEKFIKGEVER
>CP034350.1|AZM90057.1|3780233_3780836_-|PadR-family-transcriptional-regulator
MSRRSGILEFAVLGLLRESPMHGYELRKRLNTSLGVFRAFSYGTLYPCLKTLVANGWLIEEPGNAPEDALAASLAGRRAKIVYRLTAAGKEHFEELLSHTGPDTWEDESFAARFAFFGQTERDVRMRVLEGRRSRLEERLEKMRASLARTRERLDDYTLELQRHGMESVEREVRWLNELIESERAGRDRRRPGPPDETAK
>CP034350.1|AZM90058.1|3781108_3783700_+|penicillin-binding-protein
MSEHRRKPPQPQGGGRAAPRRAVPQRPGRGAGPGRDVPAAPPGGPYPEAGAHGSRADARRAAQRVPAGRGRAGGKGGRDGKGGGRFIDYPRAGKAGWKRFVPSWKLVGGTFLGFFAVIFAGAGIGIASVGTPDANKAAKAQNNVFQWADGTQMVATGGSTNRQIVPIDQIPLSMRNAVIAAENESFETDKGVDPMGIARAVVNMATGGSTQGGSTITQQYVKNTYLDSEQTLKRKVTELFIAIKLGVSEEKDVVLAGYLNTAYYGRDAYGIQAAARAYFGKDAKDLNPSESAFLASMLKGPNLYNPDGGIGPAATPEANEKRARLRWAWVLDREVAVGRMAQSERDKYKEFPARVDSEQARGMSGQTGYLVEVAKQYVMKTTGITAEKMALGGYTITTTFEKPRVDALVKAVEDTRNDFLDEKKRPQYDTYVQVGAASVDVKSGAIVALYGGPGWDHKYFANNANTSGVPVGSTWKPYVLAAAMQYGTQNSKGSGISVDSKYNADDRTVINDRSGKPLLGSDGQPFRQKNESEYPYGYVTLNEAMEKSINVPFAQLVFDVGHSKVREVAKATGILEESMDKNNNASFALGTSTPSAIRMADSYATFAASGTHREPFSVKKVVKDGKEVPGFEPPKESRAMDDSIADNVTKVLRNVVENGTGTKAKKLGRPAAGKTGTTDQNKSAWFVGYTPELSTSVTLFRNDPTSKNKELMSMNHVGGVDSIHGGDIPAAIWTEYMREALKGTPVKQFPEAEDIGVIADAAGAPQPTPSAVPSPSVSVSPSPSTSPSVSPSPSGNGKPSCKPRPWNLNCDPTVTGGANTGADAGTGPGGSPDGGTSTMPSPPTRPGRQGGSSNWGSIMGASG
>CP034350.1|AZM90059.1|3783789_3785274_+|DUF2029-domain-containing-protein
MTKVHEDRPVPPTQHDEVAAAGSEFIGGPVGRRARLGGHWLSPVRVVVLVALGMFALGMVQKLPCYDWAWFRGAGSQYTHACYSDIPHLYSARGFADGLVPYLDQFPDIVTDPKYGGMQYLEYPVLTGAFMQVAAWMTPSAGSVQHREQMYWMVNAGMLMACAAVIAVCVARTHRRRPWDALLLALAPAFALNATINWDLPAVALTAVAMLMWSRGRPLLAGVSIGLATAAKLYPVLLLGVLFVLCWRAGKWRAFGAAALGAAASWLLVNGPVMYFAWDGWKRFYEFSQERPIDFGSVWLLISQRTGSSLEGANTYATGLTLLLCLAIGLLTLTAPRRPRFAQLAFLVVAAFILANKVYSPQYVLWLVPLAALARPRWRDFLIWQAGEIAYFLGIWFYLAYTTSGDKHQGLPLEGYQLAITAHLLATLYLCAAVVRDILLPERDVVRRDGSDDPSGGVLDGAEDVFTLSERAKAPRYAAPSEGQRVAWGVDPRD
>CP034350.1|AZM90060.1|3785300_3786332_-|alanine-racemase
MALTLYVDTARWRAHQKQITDQFPGLIPVCKGNGYGFGHERLCEEATRMGADILAVGTTYEAASIKDHFGGDLLVLTPFRRGEDPVPLPDRVIRSVASVDGVRGLVGARVVIECMSSMRRHGISEQDLGMLQSAIEDVRLEGFALHLPLDRPDGSDAVEEVIGWMDRLRAARLPLHTMFVSHLRAEELARLQQQFPQTRFRARIGTRLWLGDHDATQYRGSVLDVTRVSKGDRFGYRQQKAASDGWLVVVAGGTSHGVGLEAPKALHGMMPRAKGVARAGLATVNRNLSPFVWAGKQRWFAEPPHMQVSILFVPSDATEPKVGDELVAHLRHTTTQFDRVLDS
>CP034350.1|AZM90061.1|3786366_3787485_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSLSLSTISREQHLAYLQSLPSASHCQVPAWADVKNEWRSENLGWFDKNGELVGVALVLYRQLPKVKRYLAYLPEGPVINWYAPNLDEWLQPMLAHLKQQGAFTVKMGPPVVIRRWNSAAIKAGIQDPEVKRLRDVEASHIEPRAFEVSDKLRRMGWQQGEDGGAGFGDVQPRYVFQVPLANRSLDDVLKGFNQLWRRNIKKAEKAGVEVVQGGYEDLPTWQYLYEITAERDKFRPRPLSYFQRQWTALNSEDPNRMRLYIAKHEGEPLAAATMITVGQHVWYSYGASANHKREVRPSNAMQWRMLRDSYALGASVYDLRGISDTLDENDHLFGLIQFKVGTGGEAVEYVGEWDFPLNKVLHKALDIYMSRR
>CP034350.1|AZM93188.1|3787616_3787928_-|hypothetical-protein
MHGQSSPPPISLFSTDGKPHPVQDTLMVVTLVLGAVAFVTAFFHDLHLLSSWAGLIGIGTGLYGQFISATTRERFALIIGLGASAIGFMLGMAHGGLFGGWLG
>CP034350.1|AZM90062.1|3788192_3788483_+|30S-ribosomal-protein-S6
MRHYEVMVILDPDLEERAVAPLIENFLSVVREGNGKVEKVDTWGRRRLAYEIKKKPEGIYSVLDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH
>CP034350.1|AZM90063.1|3788555_3789143_+|single-stranded-DNA-binding-protein
MAGETVITVVGNLVDDPELRFTPSGAAVAKFRVASTPRTFDRQTNEWKDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLRQRSYEDREGVKRTVYELDVEEVGPSLKNATAKVAKTTGRGGQGGYGGGQQQQGGGGGWGGAPSGGPQGGGAPSDDPWASSAPAGGQQAGGGGGWGGSSGGSGGGYSDEPPF
>CP034350.1|AZM90064.1|3789185_3789422_+|30S-ribosomal-protein-S18
MAKPPVRKPKKKVCAFCKDKTAYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPYTSTAR

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Crispr_ID: CP034350_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034350_9

4082239-4082349

Orphan

Consensus_repeat	Method
CCCGCGCCTCAAACGCCGGCGGGGCTGGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034350_9

>merge|CP034350|9|4082239-4082349|CRISPRCasFinder
CCCGCGCCTCAAACGCCGGCGGGGCTGGAGGGTCCCGGGCTGGGCCCGGGCCCGCTTCTGGGGGCTCCGCCCCCAGACCCCCGCGCCTCAAACGCCGACGGGGCTGGAGGG

>CP034350|9|8|4082239-4082349|CRISPRCasFinder
CCCGCGCCTCAAACGCCGGCGGGGCTGGAGGG	TCCCGGGCTGGGCCCGGGCCCGCTTCTGGGGGCTCCGCCCCCAGACC
CCCGCGCCTCAAACGCCGACGGGGCTGGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
CP034350.1\|AZM90286.1\|4070969_4072526_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|225168
CP034350.1\|AZM90292.1\|4078356_4080198_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
CP034350.1\|AZM90302.1\|4089600_4090026_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
CP034350.1\|AZM90297.1\|4084600_4085224_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
CP034350.1\|AZM90299.1\|4086791_4087322_+\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
CP034350.1\|AZM90296.1\|4083836_4084604_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225382
CP034350.1\|AZM90291.1\|4077611_4078289_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
CP034350.1\|AZM90301.1\|4088880_4089456_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
CP034350.1\|AZM93215.1\|4072625_4073315_-\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133024
CP034350.1\|AZM90293.1\|4080313_4080817_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM90300.1\|4087351_4088755_+\|M1-family-peptidase	unknown	unknown	gnl\|CDD\|341066
CP034350.1\|AZM90298.1\|4085220_4086402_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP034350.1\|AZM93216.1\|4090043_4090556_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|214900
CP034350.1\|AZM90288.1\|4074052_4075129_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
CP034350.1\|AZM90295.1\|4082382_4083612_-\|class-A-beta-lactamase-related-serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
CP034350.1\|AZM90289.1\|4075573_4076953_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274522
CP034350.1\|AZM90294.1\|4080905_4081991_-\|M4-family-peptidase	unknown	unknown	gnl\|CDD\|341060
CP034350.1\|AZM90287.1\|4073450_4073861_-\|hypothetical-protein	unknown	unknown	unknown
CP034350.1\|AZM90303.1\|4090919_4092668_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
CP034350.1\|AZM90290.1\|4077097_4077574_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
CP034350.1\|AZM90286.1\|4070969_4072526_+\|DoxX-family-membrane-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	1.708e-06
CP034350.1\|AZM90292.1\|4078356_4080198_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.55899e-85
CP034350.1\|AZM90302.1\|4089600_4090026_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	3.00098e-58
CP034350.1\|AZM93215.1\|4072625_4073315_-\|nucleotidyltransferase-family-protein	gnl\|CDD\|133024	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.	1.05155e-59
CP034350.1\|AZM90299.1\|4086791_4087322_+\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	1.82327e-28
CP034350.1\|AZM90296.1\|4083836_4084604_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	7.32159e-11
CP034350.1\|AZM90291.1\|4077611_4078289_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	5.12699e-19
CP034350.1\|AZM90301.1\|4088880_4089456_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	2.15422e-114
CP034350.1\|AZM90297.1\|4084600_4085224_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.92817e-65
CP034350.1\|AZM90300.1\|4087351_4088755_+\|M1-family-peptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	1.08046e-170
CP034350.1\|AZM90298.1\|4085220_4086402_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.12275e-50
CP034350.1\|AZM93216.1\|4090043_4090556_-\|flavin-reductase	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	2.01373e-43
CP034350.1\|AZM90288.1\|4074052_4075129_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
CP034350.1\|AZM90295.1\|4082382_4083612_-\|class-A-beta-lactamase-related-serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.15725e-55
CP034350.1\|AZM90289.1\|4075573_4076953_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	1.10118e-60
CP034350.1\|AZM90294.1\|4080905_4081991_-\|M4-family-peptidase	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	5.47364e-97
CP034350.1\|AZM90303.1\|4090919_4092668_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	6.85015e-43
CP034350.1\|AZM90290.1\|4077097_4077574_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.56889e-14

>CP034350.1|AZM90294.1|4080905_4081991_-|M4-family-peptidase
MSHPHRPRRLALTAAALLGAAALASTTPATAGTGAATGTGITQYSATVPLGTTSTGTTPTAYQLQDPTRGGQRTLDALNQTDNPGVPFTDADNTWGDGTPAHRQTAAADVHYATAMTWDFYKAAFNRNGVRGDGAGTTSRVHYGSGFGNAFWSDSCACVTYGDGTTPGRPPTSLDVVGHELAHGLTASTARLGYSGEPGALNEGTSDILATAGEFFAENKADPGDYLLGERVFDGPPRRMDRPSADGVSRDYWSSDIAALDPHAGSGPARHFYYLLAEGSGPKVIDGVAYDSPTHDGSKLLGIGRDKATRIWYRALTLHMRSTTNYAGARTATLRAAADLYGPSAPETARVAAAWTAVNVR
>CP034350.1|AZM90293.1|4080313_4080817_-|hypothetical-protein
MLDIGYSLSRRFPDPPQTDYRSADVHTLRHDLFCGDVYLADTEKDTEVSTAWGWVPVLDFAWALCDIVEQLDEDPRGSRSANRQYAELDFTESADRMLFERRFGWVDIEADWMAPEEEPLTFSHRLLRREARDFLHDLIADLVDMHEGLGDNPVIWTLQSRFPRVPA
>CP034350.1|AZM90292.1|4078356_4080198_-|serine/threonine-protein-kinase
MSDTHPAELFQPLGQDDPATVGGYRLSAVLGSGGMGKVYLSYTLGGRPVALKVIRPEFSEDAEFRRRFQQEVRAAQRVQGLYTAPVIDFDTDGAQPWLATAYVPGPSLAHAVSVHGRLPLRSVLLLTIGVAEALQVIHGADIVHRDLKPANVLLASDGPRVIDFGIARAADATSLTSSGVSVGTPAFMAPEQASTGTVTAATDVFALGQIMAFAAIGAPAYGDGNSHAILYRIVHEDPDLSALPAELKPLVARCLSRDPAGRPSLSEIIETCHAISPAPLRQGEDWLPKAVAGSITERLRLPEPARTPPPQPSAAPTPTELSAPAQPPTAPARPADYPLRPPAPAYAPTQTAPAPPAAAPGHPTQPPGYQTPPPGYPTPPPGYPTAAPGYPTPPPLHQPGYPPATPPKSGPNGRVIAGAVIGGLIGIAVIVSLLPDGSAKDKGSSAAGDRGAATTPAPGSSAAQNQNKNQKRPDPTPATYQGIDITANYQVMLADNPPRPVTGGSNGVLYNGGDFFYYRDSLFGETKVGTANGKLVVLNNAQKGSLETCRTETRYAEKIGLDQLTNGSEICVLSNAGHIAVLTYRGKSDAKDASNYITVDLTVWRNAEDPKKH
>CP034350.1|AZM90291.1|4077611_4078289_+|pentapeptide-repeat-containing-protein
MARNERAKVKVAQARRPEVRLPELVVWGGGGLEPDGDYDGLEFADLDLGAEDGTGARFMDCALRRCALDGARLPKARFLDAVLEGVRGVGTDLSGVTLRDVELVEARLGGVQLHGAVLERVLVRGGKIDYLNLRAARLRDVVFEGCVLVEPDFGGAVLERVEFRDCVVRGADLTGARLADVDLRGAVELGIARGVEALAGAVISPGQLFELAPVLAAHLGLRVVG
>CP034350.1|AZM90290.1|4077097_4077574_+|GNAT-family-N-acetyltransferase
MIRAAVVDDVAEIHSMIRELAEYEKVPHEARATEEQLRGALFGERPAVFAHIAESGSGEVVGFAVWFLSFSTWRGVHGIYLEDLYVRPGARGGGYGRALLAELARTCVERGYERLEWSVLKWNAPTIGFYEALGARPQDEWSVYRLTDGALARLGGAG
>CP034350.1|AZM90289.1|4075573_4076953_-|FAD-dependent-oxidoreductase
MTINGGISFWYATGTTAHQPPRAPLTTDATADVVIVGGGYTGLWTAYYLKRAAPDLRVTVLEQKFCGYGASGRNGGWLYNGIAGRDRYAALHGHEAARRLQLAMNDTVTEVIDVAAKEGIDADIHRGGVLEVARTPAQLARLKAFHAAELSFGETGRELYDAPATRARIDVADAVGSSWTPHGARVHPLKLVRGLADACDRLGVVIHEATPVTEIAPRRAVTPYGTVRAPYVLRCTEGFTAALKGHKRTWLPMNSSMIVTAPLPPSVWKHLNWQDAPLLGDMAHAYMYAQRTADDRIAIGGRGVPYRFGSRTDNDGRTQPATVTALRDLLFTFFPQLTGTPITHAWSGVLGVPRDWCATVTLDAGTGLGWAGGYVGSGVATANLAGRTLRDLVLGDPTDLTSLPWVHHRVRRWEPEPFRWLGVHALYAAYRKADHHESATHRPTTTPLARLANHISGRA
>CP034350.1|AZM90288.1|4074052_4075129_-|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MASVTFDKATRLYPGGDKPAVDQLELEIEDGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGNRDVTHLPPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGEDKATIRRKVEEAAKMLDLTQYLDRKPKALSGGQRQRVAMGRAIVRKPQVFLMDEPLSNLDAKLRVSTRTQIAALQRDLGITTVYVTHDQVEAMTMGDRVAVLKDGLLQQVDTPRNMYDRPANLFVAGFIGSPAMNLVEVPITDGGVKFGESVVPVSREALSAAAGSGDKTVTVGVRPEHFDIGDTGGLTITVNVVEELGADGYVYGSRDGQDLVVRVNGRQVPEKGSSLHVVPRPDEIHVFSTSTGARLSN
>CP034350.1|AZM90287.1|4073450_4073861_-|hypothetical-protein
MTHTARRIGRSLALVLPVVLVLSGTLAVTMVPWADNSSQILTASAEDVSVPKKPAAPQDLLRDKLLGELQQGEQPGTVLTHLQQEVNGRPSLAEHCVSIARALGRAAVEAYGPTKAQSYARPVCDTSYATGVASMG
>CP034350.1|AZM93215.1|4072625_4073315_-|nucleotidyltransferase-family-protein
MAGGQGTRLRPYTDDRPKPMVEIPGTGLPIIGHQLVWLAAEGVTDVVVSCGHLAEVLQEWLATAVLPLRVTTVVEEEPLGRGGGLKFAARGLPRPDGAWYATNGDVWTRFPLREMAAFHAEREAVATLALARPRMPWGVVETNEFGQVLDFIEAPPSPYPINAGVYVFAPGFASLLPDLGDHERTTFPRLARERRLAGFPLPQGAYWRAIDTAKDLTEAARELAAQGGV
>CP034350.1|AZM90286.1|4070969_4072526_+|DoxX-family-membrane-protein
MSVDTRTSGFDDQPALSMVKVPCDPAQVIVNHASFRVRLAPSPSARSKPAKAPGRAPLLGAAAVATAGAARRRAPVVWSGKSAPGDAAAMGGLLQAVREAGRGHDDYDGGAATQTIPRVDLAHDLGEDTLASPTVIGQRTYGDPDETRPLAAVRDLPREPYPPYGRYDGDHQGPDTGPDSRRPAPDARGQASYYPGRRMNLGVVLLPLRVFLGFISIYAGMGKLCDPVYFDGGERGSMVTWLQTLHPWALAEPLRDFALAHPVGAGLSVAFLQVIVGVLTVFGLWQRFAACIGALLSAALLMTVSWKTVPAYDAPDIIYLAAWSPLVIAGAPVYSLDARLSGEAWRTLGPRSEIWRLRRRVLRRGAVMATVVCGLTLLIGSLLGGAVRSSTVVTVPGPGQAPSNYLPGSPLPQAPAKQTAPGRQQQPSKQASPSAAPSQPAATSGRPGSSAPTRNSSTTGSGAPTAGKTSGSGGQTPRGSTPKQSSPQQPPATSSGSRSGSGGDAPAKKPGLVGGLLG
>CP034350.1|AZM90295.1|4082382_4083612_-|class-A-beta-lactamase-related-serine-hydrolase
MTMGQNGFTEAGLRKMRDVLTRHVESGRIPGLVALVSRGDETHVEAIGTMRHDGGAPMRRDTIFRMASTSKPVAMAAAMALVDDCEIRLDDTVEQWLPELAGRQVLARIDGPLDETVPARRPITVRDLLNSTFGLGIDLTAMGSPITAALFERGVFTQGGEPAPEQDEWMRRLGTLPLMRQPGEQWQYHISHDVLGVLVSRVTGKPFETFLRERVLDPLGMKDTGFHVPADKIDRLPPSYAPDPQTGEFHVWDEAAGGRYSAPPAFQSGGGGLVSTVDDYHAYFRMLLNQGTHGGERILSRPAVELMTTNSLTAEQEATRSALARNSVHVSFGQGQQGGWGFGMAVRTYRGDYAPVGQFGWDGGTGTSAYADPHNQLTGILLMQVGLTNPAPARVIHDFWTTTYQALEN
>CP034350.1|AZM90296.1|4083836_4084604_+|MarR-family-transcriptional-regulator
MPGGRLTGEERRHIATWLAEGLGYAEIGRRMARPASTVMREVTRNGGPGGYGADRAQEAARHRARRRKEVRPAAPPVPDAGHGRDPRAVREFTESFTGLLAGQGLPPMVSRVLACLYTTDSGALTAAELVERLHVSPASVSHAVAWLEGQGMLRRERTPGARRERYAIDDQLWLRSLLSAAQMNDVLVAASQRGAEILGASTPAGARFESSVELLTLVNESLRGVMEQWRLRLAERAAAGAADAGPGTAADADTV
>CP034350.1|AZM90297.1|4084600_4085224_-|response-regulator-transcription-factor
MTTILLCDDHVVVRAGLLALLGSEPDIEVLGEAGSGEEAVALAAKLRPDVVLMDLQLGEGIDGVEATRRITALPGPPHVLVLTTYDTDADITRAIGAGATGYLLKAERPEELFAAIHSAAAGRTTLSAPVASRVMAHMRGTRPTLTDRELDILGQLARGLGNRDIARALFISEATVKTHLGRIYDKLGVDTRAGAVAVAKEQRLLPS
>CP034350.1|AZM90298.1|4085220_4086402_-|sensor-histidine-kinase
MTRAPDTRTLATVMHTAFFLLLGASVARFLLRHPGEPRTPWVISLGIALALLYVLGPAVGVTQAAHATDRPAPTLRRRLWLGLVVATWVVLVVLAPSFAWCAVPLFFTALRTLPPRAAVALVAVLTVFVVAAQMKLSTAFDPNLLLAPPAIAALATAVFVHMERQARAQRALIDDLIRTRRELAATERREGTLAERQRLSMEIHDTLAQHLSSQQMLLQAADRTWDSDPATARAHVRTANGIAARGLAEARRLVHDLAPPELDNGAGLAEALRALDAGPGVEVRFHLEGVPALLPDRTESALLRIAQGALANIREHAHAHTAALTLSFLGDQVVLDIADDGAGFTAAASDPGRGHGLPAMRARVRQLGGSLTIESTPGEGTVLSASIPLEPAG
>CP034350.1|AZM90299.1|4086791_4087322_+|heme-binding-protein
MNTRTRVLTGTALAVVLGAGTFGAVTASATPAAPAKKDSDKNFTTSTHLTIGAATRAAQAALEAAEKENQKVTVAVVDRNGNTIVTLRGDGAGPQSYESAQRKAFTAVSWNAPTSVLVGRLAQAPNLKDIPGTLFLGGGAPVQANGAPVAGIGVAGAPSGDLDEKFAKAGVESLQQ
>CP034350.1|AZM90300.1|4087351_4088755_+|M1-family-peptidase
MELKRLAVPAVTALLVLATGCTGATVQGRPGASGLRDPFFPRAGNGGYQVEHYALDLAYDPADGRLHGTAVITARAEQGLSSFNLDLSGLKVEAVDVQGAGARFNRTGNELTVRPAKDLKKGEVFRTRVDYTGRPKPVVDPDGAREGWITTEDGAVAVGEPVGSMGWFPGNHHPSDKAAYDVTVTVPDGYEAVSNGQLRSRREVGDGRTEFAWHSPEPMASYLATVAIGKFEVSTGRTPSGVAVYQAVAPGEAAGSGAALKRLPEVVEWGGARFGPYPFGTAGSIVMPARTLAYALETQTKPVYSGAPDEGLVVHEMAHQWFGNSVSPKTWKDMWLNEGFATYAEWLWSEDHGGVGAQRRFEAFLTGDTSVDDQAGGDWAAFPPAAPPGAGHVSDAPVYYRGAMVLHRIRQEVGDEKFFDLLRGWVADHRYGNASTADFTAYAERRTGHDLKKVWDVWLYGEGRPKA
>CP034350.1|AZM90301.1|4088880_4089456_-|TerD-family-protein
MAVSLSKGGNVSLSKEAPGLSAVTVGLGWDVRTTTGVDFDLDASAIAVNAMGKVVSDGHFVFFNNKSTPDQTIVHTGDNRTGAGAGDDEAINVNLAGLPADVDKIVFPVSIYDAENRSQNFGQVRNAYIRVVNQAGGAEIARYDLSEDAATETAMVFGELYRNGAEWKFRAVGQGYASGLVGIAQDFGVNV
>CP034350.1|AZM90302.1|4089600_4090026_+|aminoacyl-tRNA-hydrolase
MPGPHVIRGSVVLPEAELAWRFSRSSGPGGQHVNTSDSRVELSFDLAATKALPEVWKERALERLASRLVDGVVTVRASEHRSQLRNREMALVRLASLLAEATAPPPKPRRATKIPRGINERRLREKKARGETKRNRSSRDW
>CP034350.1|AZM93216.1|4090043_4090556_-|flavin-reductase
MSNDEFRAAMSRLAAGVCLITAHEPPLTADGPRGEDVGMTATAFMSVSLDPPLVLVSVREGSRMDDLLAEQPLWAVSLLADSQLQVAGRFSMKGRISDRLLFEGLPLVRGALSGALLLTGSLATLECRTESRVTAGDHTLVIGRVLGAGLPVPDAPPLTYFRGRYRHLAP
>CP034350.1|AZM90303.1|4090919_4092668_+|diguanylate-cyclase
METESEPYVRLATLRQLHQAVAELNTARSLADTLQTVVDGIVRGLGYELACVNLVRPDGDLVVAAFAGDPAAEALITGRVGSRPAWERRLTMGENWDGLRFIPHTEGWVLMEDDVPQWHTDGPDPRFQDEWHPEDRLYAPMYATGGELLGVISVDRPRNGRRPGAWGREALQMYAFQAAIAISNARLRANMQRALVRLEREQQALRASEESFRQAFEYAPSGMAIAEMGGDQHGRLLRTNDALCRLLGRPASVLRRYSFSDLVHPEDIGTLLRTSAEGGRAELRLGRRDGTYVWVSLRNSVVADAADGPRFLLTHVEDIEERKRHELQLAHRASHDSLTGLPNSAELRSRLGARLCRRPQSVRAGAVEALDAAYEGRPEAGGAGEHGFPPEGQHPGQYHAYDGGFPAAPAPAPGQAADAFDFPGAFPGSADGPYDHHVHTVAPATDVDDGTKGLAVLFCDLDGFKSINDRFGHHTGDAVLIEVARRLTTCVRDGDTVARLGGDEFVVLADGLGAADAADLAVRLRNAIIPPIRVDGRAVRVGASFGIGWASCGMSADEVLRSADQRMYIEKRSRSKAHRRAG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP034350_1	1.3\|1801805\|49\|CP034350\|CRT	1801805-1801853	49	CP034350.1	1802135-1802183	1	0.98
CP034350_1	1.3\|1801805\|49\|CP034350\|CRT	1801805-1801853	49	CP034350.1	1802561-1802609	1	0.98
CP034350_1	1.3\|1801805\|49\|CP034350\|CRT	1801805-1801853	49	CP034350.1	1802339-1802387	2	0.959
CP034350_1	1.5\|1801952\|49\|CP034350\|CRT	1801952-1802000	49	CP034350.1	1802135-1802183	1	0.98
CP034350_1	1.5\|1801952\|49\|CP034350\|CRT	1801952-1802000	49	CP034350.1	1802561-1802609	1	0.98
CP034350_1	1.5\|1801952\|49\|CP034350\|CRT	1801952-1802000	49	CP034350.1	1802339-1802387	2	0.959
CP034350_6	6.1\|2917031\|20\|CP034350\|CRISPRCasFinder	2917031-2917050	20	CP034350.1	5963906-5963925	2	0.9
CP034350_6	6.2\|2917079\|20\|CP034350\|CRISPRCasFinder	2917079-2917098	20	CP034350.1	4944256-4944275	1	0.95
CP034350_6	6.2\|2917079\|20\|CP034350\|CRISPRCasFinder	2917079-2917098	20	CP034350.1	1302315-1302334	2	0.9
CP034350_6	6.2\|2917079\|20\|CP034350\|CRISPRCasFinder	2917079-2917098	20	CP034350.1	2394799-2394818	2	0.9
CP034350_6	6.2\|2917079\|20\|CP034350\|CRISPRCasFinder	2917079-2917098	20	CP034350.1	4872998-4873017	2	0.9

1. spacer 1.3|1801805|49|CP034350|CRT matches to position: 1802135-1802183, mismatch: 1, identity: 0.98

gccacggtcgtcacgaccgccgcggaagcccccacggtcgtcatcacga	CRISPR spacer
gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcatcacga	Protospacer
****************************** ******************

2. spacer 1.3|1801805|49|CP034350|CRT matches to position: 1802561-1802609, mismatch: 1, identity: 0.98

gccacggtcgtcacgaccgccgcggaagcccccacggtcgtcatcacga	CRISPR spacer
gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcatcacga	Protospacer
****************************** ******************

3. spacer 1.3|1801805|49|CP034350|CRT matches to position: 1802339-1802387, mismatch: 2, identity: 0.959

gccacggtcgtcacgaccgccgcggaagcccccacggtcgtcatcacga	CRISPR spacer
gccacggtcgtcacgaccgccacggaagccaccacggtcgtcatcacga	Protospacer
*********************.******** ******************

4. spacer 1.5|1801952|49|CP034350|CRT matches to position: 1802135-1802183, mismatch: 1, identity: 0.98

gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcgtcacga	CRISPR spacer
gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcatcacga	Protospacer
******************************************.******

5. spacer 1.5|1801952|49|CP034350|CRT matches to position: 1802561-1802609, mismatch: 1, identity: 0.98

gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcgtcacga	CRISPR spacer
gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcatcacga	Protospacer
******************************************.******

6. spacer 1.5|1801952|49|CP034350|CRT matches to position: 1802339-1802387, mismatch: 2, identity: 0.959

gccacggtcgtcacgaccgccgcggaagccaccacggtcgtcgtcacga	CRISPR spacer
gccacggtcgtcacgaccgccacggaagccaccacggtcgtcatcacga	Protospacer
*********************.********************.******

7. spacer 6.1|2917031|20|CP034350|CRISPRCasFinder matches to position: 5963906-5963925, mismatch: 2, identity: 0.9

ggagcccctcccggagcccc	CRISPR spacer
ggatcccctcccgcagcccc	Protospacer
*** ********* ******

8. spacer 6.2|2917079|20|CP034350|CRISPRCasFinder matches to position: 4944256-4944275, mismatch: 1, identity: 0.95

cggcgcctccccggccccct	CRISPR spacer
cggcgcctccccggcgccct	Protospacer
*************** ****

9. spacer 6.2|2917079|20|CP034350|CRISPRCasFinder matches to position: 1302315-1302334, mismatch: 2, identity: 0.9

cggcgcctccccggccccct	CRISPR spacer
cggcggctccccggccgcct	Protospacer
***** ********** ***

10. spacer 6.2|2917079|20|CP034350|CRISPRCasFinder matches to position: 2394799-2394818, mismatch: 2, identity: 0.9

cggcgcctccccggccccct	CRISPR spacer
cggcgcctcaccggcctcct	Protospacer
********* ******.***

11. spacer 6.2|2917079|20|CP034350|CRISPRCasFinder matches to position: 4872998-4873017, mismatch: 2, identity: 0.9

cggcgcctccccggccccct	CRISPR spacer
cggccccgccccggccccct	Protospacer
**** ** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034350_6	6.2\|2917079\|20\|CP034350\|CRISPRCasFinder	2917079-2917098	20	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	61351-61370	1	0.95
CP034350_7	7.1\|3034962\|25\|CP034350\|CRISPRCasFinder	3034962-3034986	25	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1776650-1776674	4	0.84
CP034350_7	7.1\|3034962\|25\|CP034350\|CRISPRCasFinder	3034962-3034986	25	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	488936-488960	4	0.84
CP034350_7	7.1\|3034962\|25\|CP034350\|CRISPRCasFinder	3034962-3034986	25	NC_042084	Escherichia phage VB_EcoS-Golestan, complete genome	41819-41843	4	0.84
CP034350_7	7.1\|3034962\|25\|CP034350\|CRISPRCasFinder	3034962-3034986	25	NC_041894	Propionibacterium phage E6, complete genome	8765-8789	4	0.84
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	536331-536356	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	146482-146507	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	328731-328756	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	133095-133120	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1926002-1926027	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	107957-107982	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	107957-107982	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP022605	Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence	832913-832938	4	0.846
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	416686-416711	4	0.846
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	324058-324087	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	252542-252571	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	400597-400626	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	318833-318862	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053711	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence	107045-107074	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053711	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence	129522-129551	4	0.867
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP053712	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence	20965-20994	4	0.867
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	MK016492	Gordonia phage Bialota, complete genome	4779-4804	5	0.808
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NC_031097	Gordonia phage Zirinka, complete genome	4779-4804	5	0.808
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	570473-570498	5	0.808
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	348831-348856	5	0.808
CP034350_8	8.1\|3777703\|26\|CP034350\|CRISPRCasFinder	3777703-3777728	26	NC_048190	Rheinheimera phage vB_RspM_Barba19A, complete genome	11715-11740	5	0.808
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	711566-711595	5	0.833
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	262806-262835	5	0.833
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	164109-164138	5	0.833
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_010580	Beijerinckia indica subsp. indica ATCC 9039 plasmid pBIND01, complete sequence	98171-98200	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MH825699	Streptomyces phage Darolandstone, complete genome	34499-34528	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_048068	Microbacterium phage OneinaGillian, complete genome	42520-42549	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021368	Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence	112649-112678	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1500820-1500849	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	507449-507478	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1709986-1710015	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021364	Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence	131723-131752	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	143156-143185	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_020205	Xanthomonas citri phage CP2 DNA, complete genome	11139-11168	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MT639641	Microbacterium phage Phinky, complete genome	41694-41723	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP025409	Paracoccus sp. BM15 plasmid pBM151, complete sequence	4471-4500	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	181104-181133	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	316989-317018	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	317359-317388	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	317359-317388	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP010408	Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence	269091-269120	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	317351-317380	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP025433	Paracoccus zhejiangensis strain J6 plasmid pPZ03, complete sequence	19428-19457	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	316989-317018	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	996919-996948	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	308990-309019	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	564675-564704	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP026654	Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence	28105-28134	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	685437-685466	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KT281796	Mycobacterium phage Zakhe101, complete genome	30939-30968	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	AY129335	Mycobacterium virus Corndog, complete genome	31884-31913	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MT818418	Mycobacterium phage Shida, complete genome	30486-30515	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_004685	Mycobacterium phage Corndog, complete genome	31884-31913	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN698993	Mycobacterium phage Firecracker, complete genome	31037-31066	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MH926062	Mycobacterium phage Vorrps, complete genome	30836-30865	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KJ829260	Mycobacterium phage YungJamal, complete genome	31732-31761	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_022325	Mycobacterium phage Dylan, complete genome	30935-30964	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MN428052	Mycobacterium phage Smooch, complete genome	32555-32584	6	0.8
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JQ067093	Pseudomonas phage PaMx74, partial genome	1110-1139	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_048068	Microbacterium phage OneinaGillian, complete genome	40239-40268	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	304215-304244	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	79402-79431	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MT553342	Microbacterium phage Kelcole, complete genome	40337-40366	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	84072-84101	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	84180-84209	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_018696	Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence	674868-674897	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP042998	Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence	62079-62108	7	0.767
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MT310894	Microbacterium phage Tempo, complete genome	40616-40645	7	0.767
CP034350_1	1.1\|1801679\|31\|CP034350\|CRT	1801679-1801709	31	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	306454-306484	8	0.742
CP034350_1	1.1\|1801679\|31\|CP034350\|CRT	1801679-1801709	31	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	474436-474466	8	0.742
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1530147-1530176	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1665949-1665978	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1281292-1281321	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1530283-1530312	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1666086-1666115	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1281302-1281331	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	330685-330714	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1281299-1281328	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1208239-1208268	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_KJ588780	Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_KP289281	Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence	76351-76380	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_MN366359	Bacterium plasmid pALTS31, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	475569-475598	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_001735	Enterobacter aerogenes plasmid R751, complete sequence	29450-29479	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP015373	Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence	49225-49254	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_011780	Borreliella burgdorferi ZS7 plasmid ZS7_lp28-1, complete sequence	2345-2374	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_017908	Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence	12600-12629	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP012899	Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence	392202-392231	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	AJ863570	Uncultured bacterium IncP-1beta multiresistance plasmid pB8	23465-23494	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_008459	Bordetella pertussis plasmid pBP136 DNA, complete sequence	23641-23670	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP025614	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence	99498-99527	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KU238092	Uncultured bacterium plasmid pDTC28, complete sequence	60739-60768	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JX469834	Uncultured bacterium plasmid pDS3, complete sequence	14010-14039	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JX469831	Uncultured bacterium plasmid pKSP212, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106172	Uncultured bacterium plasmid pAKD29, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106173	Uncultured bacterium plasmid pAKD31, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106174	Uncultured bacterium plasmid pAKD33, complete sequence	14229-14258	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_004956	Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence	76351-76380	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106165	Uncultured bacterium plasmid pAKD14, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106166	Uncultured bacterium plasmid pAKD15, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106168	Uncultured bacterium plasmid pAKD17, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_014911	Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence	59315-59344	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MN386974	Pseudomonas aeruginosa strain 1943 plasmid pPaeBURNS1, complete sequence	14363-14392	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	MG879028	Uncultured bacterium plasmid pEG1-1, complete sequence	29738-29767	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP021650	Acidovorax sp. T1 plasmid p2-T1, complete sequence	38876-38905	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KF743817	Proteus mirabilis plasmid R772, complete sequence	12588-12617	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KF743818	Bordetella bronchiseptica plasmid R906, complete sequence	12600-12629	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP019238	Rhodoferax koreense strain DCY-110 plasmid unnamed2	10153-10182	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP019238	Rhodoferax koreense strain DCY-110 plasmid unnamed2	67600-67629	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP038640	Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence	48581-48610	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	AJ639924	Uncultured bacterium plasmid pB3 complete genome	15728-15757	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KC170279	Uncultured bacterium plasmid pMBUI8, complete sequence	14226-14255	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP016024	Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence	242613-242642	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KU356987	Variovorax paradoxus plasmid pBS64, complete sequence	14225-14254	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	KU356988	Variovorax paradoxus plasmid pHB44, complete sequence	14227-14256	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP009797	Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence	14730-14759	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_013176	Pseudomonas putida plasmid pW2, complete sequence	8831-8860	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_019312	Delftia sp. KV29 plasmid pKV29, complete sequence	48636-48665	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_019320	Variovorax sp. DB1 plasmid pDB1, complete sequence	47655-47684	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP017455	Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence	21821-21850	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	106192-106221	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2701040-2701069	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_007337	Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence	70074-70103	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_024998	Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83	33073-33102	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_MN366358	Bacterium plasmid pALTS29, complete sequence	14237-14266	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_005088	Delftia acidovorans B plasmid pUO1, complete sequence	31155-31184	8	0.733
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_008385	Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence	31702-31731	8	0.733
CP034350_1	1.1\|1801679\|31\|CP034350\|CRT	1801679-1801709	31	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	42592-42622	9	0.71
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	1327063-1327092	9	0.7
CP034350_14	14.1\|5559927\|30\|CP034350\|CRISPRCasFinder	5559927-5559956	30	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	19605-19634	9	0.7

1. spacer 6.2|2917079|20|CP034350|CRISPRCasFinder matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 1, identity: 0.95

cggcgcctccccggccccct	CRISPR spacer
cggcgcctccccggcccccg	Protospacer
*******************

2. spacer 7.1|3034962|25|CP034350|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.84

cgtcgtcgtaccgccggtggtggtg	CRISPR spacer
cgtagtcgtaccgccggtcgtgggc	Protospacer
*** ************** ****

3. spacer 7.1|3034962|25|CP034350|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 4, identity: 0.84

cgtcgtcgtaccgccggtggtggtg	CRISPR spacer
gatcgtcgtactgctggtggtggtg	Protospacer
 .*********.**.**********

4. spacer 7.1|3034962|25|CP034350|CRISPRCasFinder matches to NC_042084 (Escherichia phage VB_EcoS-Golestan, complete genome) position: , mismatch: 4, identity: 0.84

cgtcgtcgtaccgccggtggtggtg	CRISPR spacer
cgtcgtcgtaccgccggtcgtctgg	Protospacer
****************** **   *

5. spacer 7.1|3034962|25|CP034350|CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 4, identity: 0.84

cgtcgtcgtaccgccggtggtggtg	CRISPR spacer
cacggtcgtaccgtcggtggtggtg	Protospacer
*.. *********.***********

6. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
gggcgccgttgccgtcacggggacga	Protospacer
 * *************** ******.

7. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
gggcgccgttgccgtcacggggacga	Protospacer
 * *************** ******.

8. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
gggcgccgttgccgtcacggggacga	Protospacer
 * *************** ******.

9. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
ccccgccgtcgccgtcaccgcgacgg	Protospacer
* .******.********** *****

10. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cttcgccggtgccgtcaccggggcga	Protospacer
* ****** *************.**.

11. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
ccccgccgtcgccgtcaccgcgacgg	Protospacer
* .******.********** *****

12. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
ccccgccgtcgccgtcaccgcgacgg	Protospacer
* .******.********** *****

13. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cggcgccgtggccgtcaccgggattg	Protospacer
** ****** *************. *

14. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 4, identity: 0.846

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
agacgcggttgccgtcaccgggccgg	Protospacer
 * *** *************** ***

15. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gaccggctgctgcgcctgctggcccggcgc	Protospacer
* ********************  ****.*

16. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

17. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

18. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

19. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

20. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053711 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

21. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP053712 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.867

gtccggctg-ctgcgcctgctggggcggcac	CRISPR spacer
-tccgtcggcctgcgcctgctgcggcggcac	Protospacer
 **** * * ************ ********

22. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to MK016492 (Gordonia phage Bialota, complete genome) position: , mismatch: 5, identity: 0.808

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cgtcgccgttgccgtcaccgcccagc	Protospacer
********************    *

23. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NC_031097 (Gordonia phage Zirinka, complete genome) position: , mismatch: 5, identity: 0.808

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cgtcgccgttgccgtcaccgcccagc	Protospacer
********************    *

24. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cagcgccgttgccgtcaccgggggcg	Protospacer
*. *******************.  *

25. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 5, identity: 0.808

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cgtcgccgttgccgacgccgggagat	Protospacer
************** *.****** .

26. spacer 8.1|3777703|26|CP034350|CRISPRCasFinder matches to NC_048190 (Rheinheimera phage vB_RspM_Barba19A, complete genome) position: , mismatch: 5, identity: 0.808

cgtcgccgttgccgtcaccgggacgg	CRISPR spacer
cgtcgccgttgccgtcaccatagccg	Protospacer
*******************. ..* *

27. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.833

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ggctggctgctgcgcctgctggcgcggacc	Protospacer
* *.****************** ****  *

28. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.833

gtccggctgctgcgcctgctgggg--cggcac	CRISPR spacer
gtcctgctgctgagcctgctgggaaccggc--	Protospacer
**** ******* **********.  ****

29. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 5, identity: 0.833

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
gtccggctcctgcgcctgct-gcacggcgcc	Protospacer
******** *********** * .****.*

30. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_010580 (Beijerinckia indica subsp. indica ATCC 9039 plasmid pBIND01, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgcggctgctgcgcctggtggggcgggcg	Protospacer
*. *************** ********

31. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MH825699 (Streptomyces phage Darolandstone, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
cgccggctgctgcgcctgctcgggcgtggc	Protospacer
  ****************** *****  .*

32. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gggcggctgctgcgcctgctgctgcggctg	Protospacer
*  ******************  *****

33. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021368 (Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ggccggctgcggcgcctgctgcggcgcttc	Protospacer
* ******** ********** **** . *

34. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac----	CRISPR spacer
gtgcggctgctgcgcctgctg----cgcaccccg	Protospacer
** ******************     ****

35. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ttgccgctgctgcgactgctggggcggtaa	Protospacer
 * * ********* ************.*

36. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ttgccgctgctgcgactgctggggcggtaa	Protospacer
 * * ********* ************.*

37. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021364 (Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ggccggctgcggcgcctgctgcggcgcttc	Protospacer
* ******** ********** **** . *

38. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctg-gggcggcac	CRISPR spacer
gaacggctgctgcgcctgctgcgggccgtc-	Protospacer
*  ****************** **** *.

39. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_020205 (Xanthomonas citri phage CP2 DNA, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
cgccgcctgctgcgcctgct-gggccgcgcg	Protospacer
  *** ************** **** **.*

40. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MT639641 (Microbacterium phage Phinky, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgcggctgctgcgcctgctgcggctgtcc	Protospacer
 * ****************** *** *. *

41. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP025409 (Paracoccus sp. BM15 plasmid pBM151, complete sequence) position: , mismatch: 6, identity: 0.8

--gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgtcc--ctgctgcgcctgctggtgcggtcg	Protospacer
  ****  **************** ****.

42. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgctggtgctgcgcgtgctgggccggcac	Protospacer
 * * * ******** ******* ******

43. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

44. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

45. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

46. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP010408 (Streptomyces vietnamensis strain GIMV4.0001 plasmid pSVL1, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgct-ggggcggcac	CRISPR spacer
ttccggctgctgtggctgctgggggtggcg-	Protospacer
 ***********.* ***** ****.***.

47. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

48. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP025433 (Paracoccus zhejiangensis strain J6 plasmid pPZ03, complete sequence) position: , mismatch: 6, identity: 0.8

--gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgtcc--ctgctgcgcctgctggtgcggtcg	Protospacer
  ****  **************** ****.

49. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

50. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gaccggttgctgcgcctgctggcgctcgac	Protospacer
* ****.*************** **   **

51. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gtccggctgctgcgcgtgctgcaggagcgc	Protospacer
*************** ***** .* .**.*

52. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgctgatgctgcgcacgctggggcggcac	Protospacer
*. * * ******** .*************

53. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP026654 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ggccggctgctgctcctgctgggacagttc	Protospacer
* *********** *********.*.*. *

54. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gacacgctgctgcgcctgctggcgctgctc	Protospacer
* *  ***************** ** ** *

55. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KT281796 (Mycobacterium phage Zakhe101, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

56. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to AY129335 (Mycobacterium virus Corndog, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

57. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MT818418 (Mycobacterium phage Shida, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

58. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_004685 (Mycobacterium phage Corndog, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

59. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN698993 (Mycobacterium phage Firecracker, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

60. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MH926062 (Mycobacterium phage Vorrps, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

61. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KJ829260 (Mycobacterium phage YungJamal, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

62. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_022325 (Mycobacterium phage Dylan, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

63. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MN428052 (Mycobacterium phage Smooch, complete genome) position: , mismatch: 6, identity: 0.8

gtccggctgctgcgcctgctggggcggcac-	CRISPR spacer
ctgcggctgctgcgactgctgcggc-gcata	Protospacer
 * *********** ****** *** ***.

64. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JQ067093 (Pseudomonas phage PaMx74, partial genome) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
cgacggctgctgcgcctgcgggtgcggcga	Protospacer
   **************** ** *****.

65. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgtgcctgctgcgcctgctcgagcggcat	Protospacer
 * .* ************** *.******.

66. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgcggctgctgcgtctgctggggctgacg	Protospacer
*. ***********.********** *

67. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgcggctgctgcgtctgctggggctgacg	Protospacer
*. ***********.********** *

68. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MT553342 (Microbacterium phage Kelcole, complete genome) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgtgcctgctgcgcctgctcgagcggcat	Protospacer
 * .* ************** *.******.

69. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gccaggatgctgcggctgctggggcggttg	Protospacer
*.* ** ******* ************.

70. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gtactcctgctgcggctgctggggcggttg	Protospacer
** *  ******** ************.

71. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_018696 (Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gaccggctgctgcgcctgcggcggcaactg	Protospacer
* ***************** * ***..*

72. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
cgcacgctgcggcgccggctggggcggccc	Protospacer
  *  ***** ***** *********** *

73. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MT310894 (Microbacterium phage Tempo, complete genome) position: , mismatch: 7, identity: 0.767

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctgtgcctgctgcgcctgctcgagcggcat	Protospacer
 * .* ************** *.******.

74. spacer 1.1|1801679|31|CP034350|CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 8, identity: 0.742

accacgggacccaccgcgctcgtcgtcgcga	CRISPR spacer
gcaggacgatccaccgcgctcgtcgtggcga	Protospacer
.* . . **.**************** ****

75. spacer 1.1|1801679|31|CP034350|CRT matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.742

accacgggacccaccgcgctcgtcgtcgcga	CRISPR spacer
ttcgggcgacccaccccactcgtcgtcgcgc	Protospacer
 .*. * ******** *.************

76. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcggcgctgctgcgcctgctggcgcggggg	Protospacer
*.   ***************** **** .

77. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcagcgctgctgcaccggctggggcggctg	Protospacer
*.   ********.** ***********

78. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgtcgctgctgcgcctgctggcgcggggg	Protospacer
*. . ***************** **** .

79. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcggcgctgctgcgcctgctggcgcggggg	Protospacer
*.   ***************** **** .

80. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcagcgctgctgcaccggctggggcggctg	Protospacer
*.   ********.** ***********

81. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcggcgctgctgcgcctgctggcgcggggg	Protospacer
*.   ***************** **** .

82. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcagcgctgctgcaccggctggggcggctg	Protospacer
*.   ********.** ***********

83. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgtcgctgctgcgcctgctggcgcggggg	Protospacer
*. . ***************** **** .

84. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgtcgctgctgcgcctgctggcgcggggg	Protospacer
*. . ***************** **** .

85. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_KJ588780 (Achromobacter xylosoxidans strain A22732 plasmid pA22732-IMP, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

86. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_KP289281 (Pseudomonas sp. EGD-AKN5 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

87. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_MN366359 (Bacterium plasmid pALTS31, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

88. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcagcgctgctgcaccggctggggcggctg	Protospacer
*.   ********.** ***********

89. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_001735 (Enterobacter aerogenes plasmid R751, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

90. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP015373 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

91. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_011780 (Borreliella burgdorferi ZS7 plasmid ZS7_lp28-1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
aggctgctgctgcggctgctggtgcggctg	Protospacer
.  * ********* ******* *****

92. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_017908 (Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

93. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP012899 (Burkholderia sp. CCGE1001 plasmid pCCGE1001a, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
caccggctgctgcgcctgcggcggcaactg	Protospacer
  ***************** * ***..*

94. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to AJ863570 (Uncultured bacterium IncP-1beta multiresistance plasmid pB8) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

95. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_008459 (Bordetella pertussis plasmid pBP136 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

96. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP025614 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ctggcaccgctgcgcctgctgggccggcag	Protospacer
 *   .*.*************** *****

97. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KU238092 (Uncultured bacterium plasmid pDTC28, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

98. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JX469834 (Uncultured bacterium plasmid pDS3, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

99. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JX469831 (Uncultured bacterium plasmid pKSP212, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

100. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106172 (Uncultured bacterium plasmid pAKD29, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

101. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106173 (Uncultured bacterium plasmid pAKD31, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

102. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106174 (Uncultured bacterium plasmid pAKD33, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

103. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_004956 (Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

104. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106165 (Uncultured bacterium plasmid pAKD14, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

105. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106166 (Uncultured bacterium plasmid pAKD15, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

106. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106168 (Uncultured bacterium plasmid pAKD17, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

107. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

108. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_014911 (Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

109. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MN386974 (Pseudomonas aeruginosa strain 1943 plasmid pPaeBURNS1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

110. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to MG879028 (Uncultured bacterium plasmid pEG1-1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

111. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP021650 (Acidovorax sp. T1 plasmid p2-T1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

112. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KF743817 (Proteus mirabilis plasmid R772, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

113. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KF743818 (Bordetella bronchiseptica plasmid R906, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

114. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP019238 (Rhodoferax koreense strain DCY-110 plasmid unnamed2) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

115. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP019238 (Rhodoferax koreense strain DCY-110 plasmid unnamed2) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

116. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP038640 (Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

117. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to AJ639924 (Uncultured bacterium plasmid pB3 complete genome) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

118. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KC170279 (Uncultured bacterium plasmid pMBUI8, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

119. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP016024 (Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
atccggctgctgcgcctgtaggggactagc	Protospacer
.*****************. ****    .*

120. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KU356987 (Variovorax paradoxus plasmid pBS64, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

121. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to KU356988 (Variovorax paradoxus plasmid pHB44, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

122. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP009797 (Burkholderia ambifaria AMMD plasmid pBII_1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

123. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_013176 (Pseudomonas putida plasmid pW2, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

124. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_019312 (Delftia sp. KV29 plasmid pKV29, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

125. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_019320 (Variovorax sp. DB1 plasmid pDB1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

126. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP017455 (Dickeya solani strain PPO 9019 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

127. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

128. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gaggcgctgctgcgcctgctggagccgctg	Protospacer
*    *****************.** **

129. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_007337 (Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

130. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_024998 (Acidovorax avenae subsp. avenae plasmid pAAA83 DNA, complete sequence, strain: 83) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

131. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_MN366358 (Bacterium plasmid pALTS29, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

132. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_005088 (Delftia acidovorans B plasmid pUO1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

133. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_008385 (Burkholderia ambifaria AMMD plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
tgcgagctgctgcggccgctggggcggcct	Protospacer
  * .********* *.*********** .

134. spacer 1.1|1801679|31|CP034350|CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.71

accacgggacccaccgcgctcgtcgtcgcga	CRISPR spacer
ttcggccgacccaccccactcgtcgtcgcgt	Protospacer
 .*.   ******** *.************

135. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.7

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
gcgtctctgctgcgcctgctggcgcggggg	Protospacer
*. .  **************** **** .

136. spacer 14.1|5559927|30|CP034350|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

gtccggctgctgcgcctgctggggcggcac	CRISPR spacer
ttccggctgctgcgcctgccggcctccctg	Protospacer
 ******************.**  .  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1760387 : 1767356

Streptomyces_phage(14.29%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZM88490.1\|1760387_1761068_+	nucleotidyltransferase	A0A1J0GW18	Streptomyces_phage	8.7e-14	36.1
AZM88491.1\|1761064_1761820_-	nucleotidyltransferase domain-containing protein	K4K696	Caulobacter_phage	1.5e-06	40.6
AZM88492.1\|1761823_1762840_-	ADP-ribosylglycohydrolase family protein	A0A2D0ZND4	Rhodococcus_phage	2.9e-29	32.1
AZM92984.1\|1762836_1763595_-	NUDIX hydrolase	A0A1W6DX89	Sphingobium_phage	6.5e-10	40.4
AZM88493.1\|1763558_1764647_-	transcriptional regulator	A0A2K8HHU5	Bacteriophage	3.3e-31	31.3
AZM88494.1\|1764643_1765252_-	nicotinamide riboside transporter PnuC	A0A0F6YPU8	Sinorhizobium_phage	3.3e-12	32.8
AZM88495.1\|1765410_1766721_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AZM88496.1\|1766720_1767356_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.9e-11	30.5

DBSCAN-SWA_2

5440060 : 5452099

Streptomyces_phage(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZM93333.1\|5440060_5440285_+	XRE family transcriptional regulator	A0A142K654	Streptomyces_phage	1.0e-08	51.5
AZM93334.1\|5440470_5440791_-	hypothetical protein	NA	NA	NA	NA
AZM91420.1\|5440809_5441718_-	radical SAM protein	NA	NA	NA	NA
AZM91421.1\|5441999_5442410_-	hypothetical protein	NA	NA	NA	NA
AZM91422.1\|5442406_5442622_-	hypothetical protein	NA	NA	NA	NA
AZM91423.1\|5442614_5442809_-	hypothetical protein	NA	NA	NA	NA
AZM91424.1\|5442805_5443006_-	hypothetical protein	NA	NA	NA	NA
AZM91425.1\|5443102_5444338_-	XRE family transcriptional regulator	A0A142K650	Streptomyces_phage	4.9e-55	36.1
AZM93335.1\|5444445_5444655_-	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	6.8e-10	47.8
AZM91426.1\|5444696_5444927_-\|holin	holin	A0A0K1Y5A3	Streptomyces_phage	9.4e-21	72.2
AZM91427.1\|5444940_5445822_-	peptidoglycan-binding protein	D7NW66	Streptomyces_phage	3.4e-87	56.8
AZM91428.1\|5445887_5446406_-	hypothetical protein	NA	NA	NA	NA
AZM91429.1\|5446418_5449754_-	hypothetical protein	D7NW64	Streptomyces_phage	6.5e-171	37.4
AZM91430.1\|5449768_5452099_-	hypothetical protein	A0A2H5BLS1	Streptomyces_phage	1.9e-76	50.7

DBSCAN-SWA_3

5473390 : 5478681

Streptomyces_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZM91463.1\|5473390_5473699_-	WhiB family transcriptional regulator	A0A1J0MBY1	Mycobacterium_phage	7.9e-07	40.2
AZM91464.1\|5473695_5474130_-	hypothetical protein	NA	NA	NA	NA
AZM93338.1\|5474126_5474684_-	hypothetical protein	A0A2D1GNV3	Streptomyces_phage	7.9e-21	35.8
AZM91465.1\|5474710_5475076_-	hypothetical protein	NA	NA	NA	NA
AZM91466.1\|5475075_5475822_-	DNA polymerase III subunit epsilon	A0A0R8VDA1	Thermobifida_phage	5.8e-35	40.5
AZM91467.1\|5475818_5476673_-	recombinase RecT	A0A173G9I3	Propionibacterium_phage	1.2e-60	52.5
AZM91468.1\|5476669_5476912_-	hypothetical protein	NA	NA	NA	NA
AZM91469.1\|5476908_5477820_-	hypothetical protein	A0A160DEY0	Gordonia_phage	4.2e-48	39.3
AZM91470.1\|5477816_5478215_-	hypothetical protein	NA	NA	NA	NA
AZM91471.1\|5478211_5478439_-	hypothetical protein	NA	NA	NA	NA
AZM91472.1\|5478435_5478681_-	hypothetical protein	A0A0M4RBC4	Streptomyces_phage	6.3e-15	48.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP034352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP034352_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034352_1

298110-298254

Orphan

Consensus_repeat	Method
CGACACCCGCTCCCCCGGCCACCGCCGGGAG	PILER-CR

2 spacers

The CRISPR arrays of CP034352_1

>merge|CP034352|1|298110-298254|PILER-CR
CGACACCCGCTCCCCCGGCCACGCCGAGGGCGACCCGCCGCCACCCGCCCGAGCGGGCCCCGGGCGCCTTCCCCGGCCACCGCCGGGAGCCGTGCCCCCGGTCGGACCGGACCACGATGCCCGCTCCCCCGGCCACCGCCGGGCG

>CP034352|1|1|298110-298254|PILER-CR
CGACACCCGCTCCCCCGGCCACGCCGAGGGC	GACCCGCCGCCACCCGCCCGAGCGGGCCCCGGGCGCCTTCCCCG
GCCACCGCCGGGAGCCGTGCCCCCGGTCGGA	CCGGACCACGATGCCCGCTCCCCCG
GCCACCGCCGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP034352.1\|AZM94116.1\|297201_298023_-\|AfsR/SARP-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
CP034352.1\|AZM94115.1\|296202_297129_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
CP034352.1\|AZM94113.1\|295096_295642_+\|flavoprotein	unknown	unknown	gnl\|CDD\|376786
CP034352.1\|AZM94145.1\|302251_302956_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367243
CP034352.1\|AZM94123.1\|307478_307937_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379275
CP034352.1\|AZM94144.1\|291777_292248_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP034352.1\|AZM94110.1\|293233_294082_-\|NmrA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|187578
CP034352.1\|AZM94146.1\|304500_305142_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
CP034352.1\|AZM94120.1\|303107_304292_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|169028
CP034352.1\|AZM94112.1\|294525_295038_+\|FBP-domain-containing-protein	unknown	unknown	gnl\|CDD\|379860
CP034352.1\|AZM94114.1\|295654_296161_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|368218
CP034352.1\|AZM94121.1\|305243_306503_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
CP034352.1\|AZM94124.1\|308061_309216_+\|DUF1205-domain-containing-protein	unknown	unknown	gnl\|CDD\|275309
CP034352.1\|AZM94122.1\|306499_307390_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
CP034352.1\|AZM94111.1\|294150_294357_-\|DUF4287-domain-containing-protein	unknown	unknown	gnl\|CDD\|379478
CP034352.1\|AZM94109.1\|292248_293229_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378976
CP034352.1\|AZM94119.1\|300988_302200_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|215608
CP034352.1\|AZM94117.1\|299094_299943_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276938
CP034352.1\|AZM94108.1\|290158_291685_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236199
CP034352.1\|AZM94118.1\|300182_300797_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102

Protein	Function_ID	Function_description	E-value
CP034352.1\|AZM94116.1\|297201_298023_-\|AfsR/SARP-family-transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	4.11176e-55
CP034352.1\|AZM94115.1\|296202_297129_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	2.40153e-33
CP034352.1\|AZM94113.1\|295096_295642_+\|flavoprotein	gnl\|CDD\|376786	pfam02441, Flavoprotein, Flavoprotein. This family contains diverse flavoprotein enzymes. This family includes epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance. dipicolinate synthase catalyzes the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenyl-acrylic acid decarboxylase (EC:4.1.1.-).	6.28973e-09
CP034352.1\|AZM94145.1\|302251_302956_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|367243	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain.	1.58137e-13
CP034352.1\|AZM94123.1\|307478_307937_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.72939e-09
CP034352.1\|AZM94144.1\|291777_292248_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.67085e-09
CP034352.1\|AZM94110.1\|293233_294082_-\|NmrA-family-transcriptional-regulator	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.84543e-61
CP034352.1\|AZM94146.1\|304500_305142_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	7.93606e-15
CP034352.1\|AZM94120.1\|303107_304292_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|169028	PRK07588, PRK07588, FAD-binding domain.	5.89733e-85
CP034352.1\|AZM94112.1\|294525_295038_+\|FBP-domain-containing-protein	gnl\|CDD\|379860	pfam16571, FBP_C, FBP C-terminal treble-clef zinc-finger. FBP_C is a family from the C terminal end of fibronectin-binding proteins. It forms an extended four-cysteine zinc-finger with a unique structural fold. Fibronectin-binding proteins bind to elongation factor G - EF-G, which is mediated by the zinc-finger binding to the C-terminus of EF-G. FBPs release ribosomes by competing with them for EF-G.	7.1194e-81
CP034352.1\|AZM94114.1\|295654_296161_-\|DinB-family-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	5.30366e-44
CP034352.1\|AZM94121.1\|305243_306503_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.4932e-31
CP034352.1\|AZM94124.1\|308061_309216_+\|DUF1205-domain-containing-protein	gnl\|CDD\|275309	TIGR04516, probable_glycosyltransferase, glycosyltransferase, activator-dependent family. Many biosynthesis clusters for secondary metabolites feature a glycosyltransferase gene next to a P450 homolog, often with the P450 lacking a critical heme-binding Cys. These P540-derived sequences seem to be allosteric activators of glycosyltransferases such as the member of this family. This model describes a set of related glycosyltransferases, many of which can be recognized as activator-dependent from genomic context.	1.31537e-58
CP034352.1\|AZM94122.1\|306499_307390_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	4.09567e-21
CP034352.1\|AZM94111.1\|294150_294357_-\|DUF4287-domain-containing-protein	gnl\|CDD\|379478	pfam14117, DUF4287, Domain of unknown function (DUF4287). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 70 and 180 amino acids in length.	8.16342e-26
CP034352.1\|AZM94109.1\|292248_293229_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378976	pfam12852, Cupin_6, Cupin. This is a family of bacterial and eukaryotic proteins that belong to the Cupin superfamily. Some of the proteins in this family are annotated as being members of the AraC family of transcription factors, in which case this domain corresponds to the ligand binding domain.	7.53025e-40
CP034352.1\|AZM94119.1\|300988_302200_-\|cation:proton-antiporter	gnl\|CDD\|215608	PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional.	1.0637e-62
CP034352.1\|AZM94117.1\|299094_299943_-\|hypothetical-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	1.43989e-49
CP034352.1\|AZM94108.1\|290158_291685_-\|hypothetical-protein	gnl\|CDD\|236199	PRK08244, PRK08244, monooxygenase.	3.80445e-98
CP034352.1\|AZM94118.1\|300182_300797_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.87409e-08

>CP034352.1|AZM94116.1|297201_298023_-|AfsR/SARP-family-transcriptional-regulator
MRIRILGPFSAEVDGESIMPSAGKPRQILALLALHPGRVVPVPTLMEEIWGQDLPNSALTTLQTYILQLRRRLGTAMGPGRPGVAKDVLTTRHGGYLLQVPPEAVDVHAYEDLVARGLAAFEGGDDEGAAARLRAGLAQWQGPALVDVRVGPVLAIEVMRLEESRLVAVERRIDVDLRLGRHTELLAELTELTARHAQHEGLHSQLMVALYRSGRQGAALDAYRRLRGRLIGELGIEPSPQLQRLHQAMLRVDPALDVVAGPRRGSTFDLYAA
>CP034352.1|AZM94115.1|296202_297129_-|NAD(P)-dependent-oxidoreductase
MLVLLAGASGVLGRRAAAALRAAGHEVAGLGRGEGMDVRADLLDREGLLRAVGGRRFDAVVHAATALSGRAMAAHRDMAATNRLRTEGTVNLLAAARETGARRFLVESMMFGYGYGDHGAAPIGEDDGFGPRGANAALERHVGAMRAKEELAFTADGIEGVSLRFGLFYGAGTTDTHLVPLLRGRKLPVVADRGRALSWVDAGDAARAVVLALESGRAGQAYNIADDTPVGWGAHLGAVAEAFGAPAPMRVPLWVLRAAPLAHAIMRSSLRLSNAKARRELGWEPRYASSPQGVRALAAAGAQRASGM
>CP034352.1|AZM94114.1|295654_296161_-|DinB-family-protein
MDIEARTPPVLTGDERSTLTSVLQWQRDTLRMKCAGLTDEQLRRRAVPPSGLSLLGLVRHLAEVERGWFRNVLNGEDVRGYFPKNDAGERTEFHVEDADPAESFRIWEETCERSRAIVAAAESLDVRGNSGDQAYSLHYILAHMIEEYARHNGHADLLREAIDGVTGE
>CP034352.1|AZM94113.1|295096_295642_+|flavoprotein
MTRTLYLFCSAAPPVFDVAHVIEDAQSRGWDVCLGLTPTAARWVQESLDGLAALTGNPVRWQYKLPGEPDVWPAADAILFAPATFNSVNAWALGLTDRFTVGVAAEALGKGTPVVAMPCTNAALAAHPQFEQSLAVLRGAGAELLYGEGGFLPGPAGPDAPPHFPWQVALDAVDRTGTVPA
>CP034352.1|AZM94112.1|294525_295038_+|FBP-domain-containing-protein
MEPLTEKQIRSSFVNCTKGEAARLRLPLDFAELPWQDLDFLGWVDPGAPLRAHLVIPRPDGPVGISLRVPAATRTSAVKSSLCQICLTGHASSGVTLLAAPLAGARGREGNTVGTYVCADLACSLYVRGKRQPKLRAGRQEESLTVDERVARMWGNLDSFADRITAAPAA
>CP034352.1|AZM94111.1|294150_294357_-|DUF4287-domain-containing-protein
MSEQPVKGPASYFPSIEKKYGRPVAEWADLIRSSPLTRHMELVSWLKTEHGIGHGHANALVKHTLTEK
>CP034352.1|AZM94110.1|293233_294082_-|NmrA-family-transcriptional-regulator
MTKNTNETQTARNTLTLVIGGNGKTGRRVAERLEARGRAVRIGSRTGEPAFDWNRPETWGPALEGVDRAYVTYHPDLAFPGAADRIGAFAEAAVAAGARRLVLLSGRGEEAARLAESRLRDSGADWTVVRASWFNQNFDEYFFLDSVLAGEIALPVGDAVEAFVDADDIADVVVAALTDDRHVGRTYELSGPRLLGFAEVAAELSKATGREIAYVPVTDAQYRAVLREHGLPEEFADLFTLISDGRNAHLVHGVEEVLGRPARDFADYAREAAASGVWDARG
>CP034352.1|AZM94109.1|292248_293229_-|AraC-family-transcriptional-regulator
MDTLTGLLEGPRARSAFLMKSVFDPPWAMRVEDRAPLSVMTLVRGSAWLLPDDGEAVRIGPGDVAVVRGPVPYTLADSADTPVGVRIGPDQRCSAQGEDVTERFSLGVRTWGPAREGAGSVVLLSGTYQAPSEIGRRLLGALPAVLVRPVRAADATLITLLAGEVARDEPGQELVLDRLLDLLLIGVLRAWLAAPGSGAPAWHRAQGDPVVGAALRLLHEDPAYGWTVEELARRAGVSRAALARRFTELVGEPPVAYLTGWRIALAADLLREPDATVATVARRVGYGSAFALSAAFKRVRGVSPQQFREGAGAATAAGASGTVVLG
>CP034352.1|AZM94144.1|291777_292248_+|GNAT-family-N-acetyltransferase
MSSSLRLVPVTPDNFEAVTAVRVRPDQEHLVESVAQSLAEAYVHGEAAWPRAVLDGDEVVGFVMAFLDIVWDRAKDPEHRRSGIWRLNIDAGHQGKGYGRFAVEAVTEEIRRRGGTRAYVTWHDGDDSPAPFYLGLGFRPTGELSGPQPVAVLELA
>CP034352.1|AZM94108.1|290158_291685_-|hypothetical-protein
MALRAQVAVVGGGPVGMLVAAELAGYGVDTVVLEERTEISERPKATTLHARAVQSLARRGYLPGDAPGTHAGATSAAFHFAGIHRLVITVPEGEPEPVLKRPQAELERLFEERARAAGARVLRGHRVTGIAQEPDGVRLDVEGPGGPAACRVEYLVGADGARSTVRERLGIASDTAPASVSALAGLATLEDPRALEQGWLRTPRGWIVSKRTPGGETHIRTLDCAGAYEGRERQPTPRELRDEVSRIAGRDIELTGARWISRFSDFTRLARTFRAGRTFLVGDAAHVHFPIGGQGLSSGVLDALNLGWKLALAVRGVAGERLLDSYDLERRPAARAVVDNTRAQLALMRPGEDVDALREVFTGLLAADRDAGGLAGMISAQGTVLPAYTERPSPWEGRFLPNFRLPAGAGADDLVTLLRDGRPLLLLFGEDGTRHEEEARPWAPLLRVVRTGRVPGAAHEALLVRPDGYVAWSAGGSALEGALSAYFGGGACAPAAATAGGGRGIRLS
>CP034352.1|AZM94117.1|299094_299943_-|hypothetical-protein
MDIDVLGALAVRENGISITPTAPKPRQVLALLALHADQVVPVSALIEELWGSVPPRSARTTLQTYVLQLRALIATALEGNGDEERTAKDVLVTLPGGYLLNSDRGTSDVREFDRLAGMGYRAMDAGDYPLAAQRLREALALWSGPAFADVQGGVQLDMETRRLEETRLCALDQRIEADLKLGRHRELLAELTVLVSRYRTHENLHGQFMLALHRSGRRGEALDVFQRLRATLVRDLGLEPSTALRRLQRSILMAGPEGVGKPAVAAGAGTGTAVRAERLVRA
>CP034352.1|AZM94118.1|300182_300797_-|TetR/AcrR-family-transcriptional-regulator
MVKQERAARTRESLVLAAAEVFAAEGFAAASIAAISERAGVTSGAVQFHFDGKPALAHAVEARAARALRRIAEAEGEPDRAGAPLRALVDATYALQELVAADVVVRAGFALGADAAHQSQVDLRGQCRLWAEQLMTTAGRAGLLAEGVAPQDAARVVVGFTAGLKGLGAVEPEWTPRQALARIWTVVLPGIAPHGTATTGQETD
>CP034352.1|AZM94119.1|300988_302200_-|cation:proton-antiporter
MAGGVLGAVAVVVLACGAGGVLARRVGQPAVVGEIAVGILLGPTFLGWLWPPGRRWLLPDEVLPHLAELGNLGLVVFMFLVGLELDVGMLRGLRRAVVVVSQASVWVPLGLGGLLALGLYGTFAPEGVGRAEFVLFVAVALSVTAFPVLARILTEQGLYGTPVGALAMACAAVVDVVAWCLLAVVVAVAGGGGAGAGLWRAALAGVFVAGMWWGVRPLLARGAGRWGVRERGGGVVVLFGGACLAAYATEALGVHALFGAFVFGAVVPRGVEAVESAARRMREFAVPVLLPLFFVGSGLRTDVGALRGGGAWWWAAAVLGVAVVAKWGAAAVAALVAGVRRRDAVLLGALMNCRGVTELVVLNVGLGLGVIGVELFTVLVLMALVTTAATGPVVRALAVRGGR
>CP034352.1|AZM94145.1|302251_302956_-|TetR-family-transcriptional-regulator
MLWGPPVTPARGPRRGLTLEQIASAGVGIADGEGLGGVSMQRVAGELGVTKMALYRYVPGKAEVVALMVEAAMPDPAGELDAALAVAGDGWRERLGVWARELLTGFRAHPWLLDATVGARAVGPREVGWLERALAALEGCGLTGAEAMDAVVLVAGHVRGIAEQERATAGAGGPDAELGAVLAQVVGARGEDYPALAGALASVAAHGGQDQALEFGLERILDGVGLFVERRATS
>CP034352.1|AZM94120.1|303107_304292_+|FAD-dependent-oxidoreductase
MAPLTTVLISGASIAGPALAHWLGRHGFHPTVVEIAPAPRPGGRAVDFRGETHLHVLDRMGILDELRRVQTGGTPMTFVDADDRELLHLPAAFAGGDVEVLRGDLSRILHASSRACTEYLFGDTVTSLTETPAGVDVTFRHAPPRTFDIVIGADGLHSTVRRLAFGPEERYVSHLGHYAATWSLPGDPHPTRPGSVGFNAPGRLASVAAPAATPGRAGAFFLFASPELSYDRNDPAAHKALLTRAFAGLPWRVGPLLDSLAAADDLWFDSISRADVGSWSTGRTALLGDAACGATIGGMGTGTAVVAAYVLAAELARTPQDPRTAFRRYESLVRPYARACQRGGNRTGPFLAPATPLGLRLRNALLNQPRALAWLLKQGRTTATLPLPRLPGPR
>CP034352.1|AZM94146.1|304500_305142_+|TetR/AcrR-family-transcriptional-regulator
MTRQAILDGAAVAFDRAGFGGTSLSDVVKHAGVTKGALYFHFPSKEALARTLIDEQFQVSKDVPALADPGLQTVIDLTHQMAFGLRTNVRIRAGIRLVIEFGSFTSPDPSPYNAWIETCRSCLVPAQERGDVLPSLDVRDLSTFLVGSFTGVQVTSHVRAGREDLHARVVDLWSYLLPGIVPAPRVPLFDPSGSAACRAELGLPAPQAPVPVG
>CP034352.1|AZM94121.1|305243_306503_+|ParA-family-protein
MTSPSSQNDREKVVSKLPPWLRQELKIRTAQLRVDIQDAVHQGIAHWSALASAPSPVDTSGAESFSTWLPAGQWESFRTDSKDRGVSLIQGLAQAVHLWLELNPAPTVKRPSVVRRIVVCNQKGGVGKTAVTAGTAEALAEDPASLHPVRVARQLARRTAAEEADAGHPAASALDLEDLPGLGMRVLLVDFDPQGHLTKQLGQQPLPIGGDSLTCHMAGEAKGPLQDLIAPIEHDRFGDRLHLLPACTDAFLLDVRLSTVRAREAALERALAPVESDYDVILIDCPPSLGLSMDAAIYYGRRRDTEQPGASGALIVVQAEDSSADAYDLLTSQINDLRDDLSLDIDYLGLVVNLYDGRRGYIATSSLQAWMDIKDPRVVAIVPDLKEQRESVRLKQPLFVYAPNGDQAVALRALAREIS
>CP034352.1|AZM94122.1|306499_307390_+|ParB/RepB/Spo0J-family-partition-protein
MSSKADKLGVSASFARAQPVGVSSRRAAIAEATGAPTSGVVPPSEVPIEALAHNPFNLREDLTDLEELAQSLSVRGQLQPLAVATRLAFMEAHPGQTDGLGRAPYVVIDGNRRLAAAQLAGLKTMHIHVNDALSASAADILESALIANVHRVDVAPMDQARALQELVDVHGSQAQVAKRIGKTPAWVSQRLTLLNLTPDLQEKVETGELKVEPARRIGRLPQEEQSVAAAEAVNAAAPPRQRSRPTPAPATPPAPAAPAARITISTQSPETIADALTAHLTPDDLKAVTELLVQRI
>CP034352.1|AZM94123.1|307478_307937_-|nuclear-transport-factor-2-family-protein
MSGSTIAPDTYVPAELYAEVQQFYAWQMNLLEGTDADPDAWAETFTEDAVFESAGEPEPQRGRETLRATVRAGVAHIAAQGLDFRHWFGMVGVEQRADGTLRTRYYALAMATAPGGPLAVRGSLLCHDELVRGDDGRLLVRRRSLEADGRER
>CP034352.1|AZM94124.1|308061_309216_+|DUF1205-domain-containing-protein
MRVLFNVSPGLDHIYPALGLAWALRTAGHEVAVATTGVSVQAAVGAGLMAYDVAPEADFSKIFPKKGTPEERVAAMRARGEEMTASEETPDFILEKFSEINDLMADRTLEFARTWRPDLVVYSRLQGTALITARALGIPAVENGYSFLREGNLPERLLPHLARTFERLGVPVELPTVQPIHFAPQEFMRGEGEGWSMRFVPHHGGGVLPDWLAAPKERPRLVVTLGTIVPGVAGVGSLGSVLNAVEGLDAEVVLALGDKVDLEPLGPLPGNVRPVGWTPLSWLLPTLDGIIHHGGAGTTLASAHAGVPQLAMPYGSDNWINAGIVETAGIGFNLQPEQINVDVLRTLISDEQLRKTATAVAEHLAAQPGPDVMVARLVELAGKA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034352_1	1.1\|298141\|44\|CP034352\|PILER-CR	298141-298184	44	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	298133-298176	0	1.0
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	298199-298223	0	1.0
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	1957-1981	4	0.84
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1225469-1225493	4	0.84
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	352681-352705	5	0.8
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	503597-503621	5	0.8
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	1457926-1457950	5	0.8
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	88514-88538	5	0.8
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1090932-1090956	5	0.8
CP034352_1	1.2\|298216\|25\|CP034352\|PILER-CR	298216-298240	25	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	1130458-1130482	5	0.8

1. spacer 1.1|298141|44|CP034352|PILER-CR matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ccgagggcgacccgccgccacccgcccgagcgggccccgggcgc	CRISPR spacer
ccgagggcgacccgccgccacccgcccgagcgggccccgggcgc	Protospacer
********************************************

2. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtgcccccggtcggaccggacca	CRISPR spacer
ccgtgcccccggtcggaccggacca	Protospacer
*************************

3. spacer 1.2|298216|25|CP034352|PILER-CR matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtgcccccggtcggaccggacca	CRISPR spacer
gccagcccccggtcggaccggaccg	Protospacer
 *  ********************.

4. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtgcccccggtcggaccggacca	CRISPR spacer
ccgtgccgccggtcgtaccggacgc	Protospacer
******* ******* *******

5. spacer 1.2|298216|25|CP034352|PILER-CR matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

6. spacer 1.2|298216|25|CP034352|PILER-CR matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

7. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

8. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

9. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

10. spacer 1.2|298216|25|CP034352|PILER-CR matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 5, identity: 0.8

ccgtgcccccggtcggaccggacca	CRISPR spacer
atctgcccccggtcggaccggataa	Protospacer
 . *******************. *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP034351

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP034351_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034351_1

244202-244306

Orphan

Consensus_repeat	Method
GACTTTTGTCCGCGGACAAAAGTC	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of CP034351_1

>merge|CP034351|1|244202-244306|CRISPRCasFinder
GACTTTTGTCCGCGGACAAAAGTCAGTCCCGCGCCCCATCGCCTACCCGGGCACAGCCCCACCCGGACCCACAAGAGGCCCGACTTTTGTCCGCGGACAAAAGTC

>CP034351|1|1|244202-244306|CRISPRCasFinder
GACTTTTGTCCGCGGACAAAAGTC	AGTCCCGCGCCCCATCGCCTACCCGGGCACAGCCCCACCCGGACCCACAAGAGGCCC
GACTTTTGTCCGCGGACAAAAGTC

Protein	Signature genes	Signature genes Name	Protein_function
CP034351.1\|AZM93746.1\|252511_253222_+\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93731.1\|239837_240695_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP034351.1\|AZM93743.1\|248930_250091_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
CP034351.1\|AZM93741.1\|246934_247387_+\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93732.1\|240800_241526_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187585
CP034351.1\|AZM93747.1\|253285_253705_+\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93730.1\|239132_239807_+\|leucine-efflux-protein-LeuE	unknown	unknown	gnl\|CDD\|236807
CP034351.1\|AZM93745.1\|251273_251501_-\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93734.1\|242000_242636_+\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93739.1\|245022_245421_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319925
CP034351.1\|AZM93744.1\|250301_250970_-\|GDSL-family-lipase	unknown	unknown	gnl\|CDD\|238872
CP034351.1\|AZM93733.1\|241531_241807_-\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93742.1\|247551_248934_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
CP034351.1\|AZM93737.1\|243955_244135_-\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93736.1\|243004_243883_+\|toxin	unknown	unknown	gnl\|CDD\|368892
CP034351.1\|AZM93729.1\|237615_239112_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223963
CP034351.1\|AZM93728.1\|237187_237514_+\|hypothetical-protein	unknown	unknown	unknown
CP034351.1\|AZM93738.1\|244326_244902_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236126
CP034351.1\|AZM93740.1\|245515_246511_+\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
CP034351.1\|AZM93735.1\|242678_243008_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034351.1\|AZM93729.1\|237615_239112_+\|radical-SAM-protein	gnl\|CDD\|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	3.61416e-26
CP034351.1\|AZM93731.1\|239837_240695_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.13234e-34
CP034351.1\|AZM93743.1\|248930_250091_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.67164e-37
CP034351.1\|AZM93740.1\|245515_246511_+\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.62199e-48
CP034351.1\|AZM93732.1\|240800_241526_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187585	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs. PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.66643e-80
CP034351.1\|AZM93744.1\|250301_250970_-\|GDSL-family-lipase	gnl\|CDD\|238872	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	3.38661e-37
CP034351.1\|AZM93736.1\|243004_243883_+\|toxin	gnl\|CDD\|368892	pfam06414, Zeta_toxin, Zeta toxin. This family consists of several bacterial zeta toxin proteins. Zeta toxin is thought to be part of a postregulational killing system in bacteria. It relies on antitoxin/toxin systems that secure stable inheritance of low and medium copy number plasmids during cell division and kill cells that have lost the plasmid.	1.57104e-32
CP034351.1\|AZM93730.1\|239132_239807_+\|leucine-efflux-protein-LeuE	gnl\|CDD\|236807	PRK10958, PRK10958, leucine export protein LeuE; Provisional.	1.72987e-92
CP034351.1\|AZM93738.1\|244326_244902_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|236126	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed.	4.40507e-42
CP034351.1\|AZM93739.1\|245022_245421_-\|VOC-family-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.51211e-14
CP034351.1\|AZM93742.1\|247551_248934_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.15536e-21

>CP034351.1|AZM93737.1|243955_244135_-|hypothetical-protein
MTERDTLLHELARAPARWHRASRFRASAVTEDGPEAVRRSGLCPTHTPTVLIAGGSEGR
>CP034351.1|AZM93736.1|243004_243883_+|toxin
MIDSGEVERHRLSPQENRRIFDERIVPHLLERAAPRQTPTVVFVVGQPGAGKSRITETLAHVLNRHGGFVDVDSDLYKPYHPAYAALMARDDTLMAACTRADGRAWMARAEAYVRAHKLHAIVQETSQDASAVEGKMLAYRRAGARLEALFIGVPQAMSNQGIAARYAEQLADRGQGRLTVQANADESYRGVLDLADRIDAGGLVDLATVYRHGESSPRYSNTSSEATWTVPPSLRRAIEAERNRPWTAAESTAFVAAQQRLREALGGLGPEWPERLARIEQQATASSFGGS
>CP034351.1|AZM93735.1|242678_243008_+|hypothetical-protein
MSDADADADAENGISVTHQLEPYDWSGEETAAYEAAVEAVNGAVGAYSALIAAEEGKAEPDQGVIGRAHAAQFRLAREREGLRPGDPHQIATARRHYARLAREVLDGHA
>CP034351.1|AZM93734.1|242000_242636_+|hypothetical-protein
MPNHPPQDAEYRRRVIDRYMLAMHSGCPRYLELGNWRCLRPQWPHREPFARGLIEDAAAITDADLETLLERGWRPRVTAAWLIGVGRRTSFRERIGTLLLDSEVCYAGSGYCFALARFGTAADAGILTAYLDRYLPQTGLDYDQGAALGALLHLDARLGTDHAGRFTRPDGLWYRWARARGPAYAQPVDDPGGPLRWVGLWCDFANGWTRP
>CP034351.1|AZM93733.1|241531_241807_-|hypothetical-protein
MTWSEAEYLDCLEAERRGYAWVMEHHGGLTPKEAEEAAREWYRYEPAGDPYRGLVFHDEAWHWAMLAIHGDRYTVEHPELAHPSTAYRALE
>CP034351.1|AZM93732.1|240800_241526_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSEQKIALVTGANKGIGYEIAAGLGSLGWRIGVGARDRQRRDTAVEKLCAAGTDAFGVPLDVADDASAAAAAELIADRVGGLDVLVNNAAITGGMPQMPTTVDPATVRAVVETNVIGVIRVTNAMLPMLRASASPRIVNMSSSVGSLTLQTTPGIDTGPVSAAYSVSKTFLNALTVQYARELGDTGILINAGCPGFTATDLNDFQGFRTPRQGAAIAIRLATLPDDGPSGGFFDDGGTVPW
>CP034351.1|AZM93731.1|239837_240695_-|LysR-family-transcriptional-regulator
METRELRYFVAVAEELHFGRAAQRLAMAQPPLSRAIRQLERRLGVDLLHRTARAVALTEPGRVLLREARAALDAVEAAERRTRRAAAGTPGVVLATKAGGAGELLSKLLDAYAAEPGAVAVDVMLCGPGEQEGLLRDGRADVALLHRPFDTTAGLDTEELHTEQQVLVLPAGHPSANRPRMSMAEVTSLTDLPLPRWPRRDGGYPDGPGPQVRDHTQLLQLIALGRACALVPESLRSHLRDGHATVPVPDAPAVTTVIAWPPHSRSQAVADLVRTATRLWPTAPA
>CP034351.1|AZM93730.1|239132_239807_+|leucine-efflux-protein-LeuE
MLGVQNLLTYALGALLIILLPGPSSLFTLSVAARLGVRAGYRAAAGMFLGETLLMVATAAGLASLLQANELVFAVVKYAGAGYLTWIAVGMIRAAWAMWRRRDDDTAKAATATATGTADATPPPNGRLFRRSLVITVLNPKAILFFLSFFVQFVDPGYAYPGLSFALLAVVYQAISIAYVTVLIFSGTYLASQFRRRRKLSAGLTTGAGALFLGFAAKLATTGN
>CP034351.1|AZM93729.1|237615_239112_+|radical-SAM-protein
MTLKLLLANAPNPTDNRNASNYACYPHIGIVQLATATREALGDRVEIRVVDGGISNTETVQRAVRDFEPDVVGISALTPTYSEALKIADTAKACGARVVLGDDHAIFFPEMILRNRPQIDYVIANDGGEIPFLELIRALLEGDRPLSEVSSLAYRHDGAIRVNPAPKYALSLRNTIPDLTFIDDVLDVYAENYRAQFGHLHGHQVRPVTVNNARGCENGHKRCTYCSIADLTVNTGDPRGFWKTIDQYNREHGINLFFEVYDSFTASPRYVDALIDSTPPHLKRRIDDGELQVMVYARALGLTKRNNVDKLRRLGVTRANIGLDAADPEMLEAQRKNKTTGETNLEAIRMLNKAGISVHASYIAGAPGERPETLDRTIAGIRQMLGEVELSSVEFSRFIPLPNSPAWDLLVDYERPNFFKDSGEIDRYLTALGITVTRDDREEMSARFGDQDLLDIDELGAFWADNFTHISEKYALERISEVDEMVSAHNVRTGNNVG
>CP034351.1|AZM93728.1|237187_237514_+|hypothetical-protein
MHRRRPAARRDGGGPRVRRRRLTPSGRAEVTAQWVRTSWTKRSHGAPTATLRNQAPTARPRPTSSWAPHPTTWTNAPPPLTRSAGRLGPESGHPTGSRMSGFNSPVTD
>CP034351.1|AZM93738.1|244326_244902_-|S1-RNA-binding-domain-containing-protein
MDIAETPGLWEFLSSLELGERIAGRVASIESFGVFVALDDGPAHPVYPGVGFISYAELAWQRFDAATEIVRVGQRVECEFLQFDTWNGEARLSLKATQPDPFQIFADDTSVGQTLPGRVTKLAPVGAFVEVAKGIEGLVPLLELAWTPVEAPEEIVRVGDRFRVVVTEVDRQHRRLALSRRRALPRRHLAG
>CP034351.1|AZM93739.1|245022_245421_-|VOC-family-protein
MDFVSIRIITSDVARLVDFYEGATGVRADWFTEDFAELRTPSATLAIGSTRTVALFAPGSARPADNNSVIIEFLVADVDGVYRNLGDSVADFVTEPTTLPWGNRSLLLRDPDGNLVNFFTPVTPVAMEKFAR
>CP034351.1|AZM93740.1|245515_246511_+|YafY-family-transcriptional-regulator
MARPTSRVLTLLELLQSGGIRTTTELADRLGVDVRTVRRYVDHLVDLDIPVEAVRGRYGGYRLAPGYRLPPLMLNDDEALAVLIGLVAGRRTGLPAATDTAGETATAKIRRALPERLARRLDAVLESIAFTAAPGEMATPETGVLLAIADAVRHRRPISIRYTARDGRRSERTLHPYGIVTHEGRWYVTGTDPAIGQDRTFRLDRIADARALPGSFEPPAGLDPAQRVLSGLAKAAYRHEVTLRIHGTVEQIRTRLPTSVASVEELVPAEAEAADPHAERWLRVELRAERLDWLPPVLASLDRPFVIERPDELRDLVIALADRLKASARHV
>CP034351.1|AZM93741.1|246934_247387_+|hypothetical-protein
MGTLLGAVIAHRYQEKSTARATKRAERERSHQRLLDACADFAALAEEYRRAQYDRWTSQQAPPGSETALAARAESYRLYVEVRSSLFRLRLVATGRQAQRLAEQAAEIQVKTREIFFASDRDDMLARGEVAEHACEAFVLRAREVLATGE
>CP034351.1|AZM93742.1|247551_248934_-|ParB/RepB/Spo0J-family-partition-protein
MSKSDLLGTGAAFSNARRAGGRSERGRAKALAQGDVPAYELIRVPLDQVSPTPLNPRRNFGTDEEKTRFGEELRQAQLSACVVVGREAYLGLWPDHASRIGPAAYVLINGERRFRSAVHVGLESLDFVVRDDLAVSRADFIDHLLAENLEREDFDVIERARGVQQLVDICAEQGREHGAKSRAAERLGKSPSWITNQLVLLELPEEIQAMLSSGDMPERDGRLLARAAKERPGVDAASLLDLLQENKAQEARAKAAQREILREARDAAPAAAPVAAPVPAPVPAPVPAPAPVPAPAPVPTPAPVPTPAPVPAPAPVPAPAAAVVPAEPGPAVVDALEDTAPEPRLLSADKSQDPQPQPQPETRPEPESAAVVEAPAPLAVTPTPPPEPVIAPTEPEPDGEPETEPEMAIPGQAKSSATAPLAWGDPQAVFEAIRQNMPPRQRAELTMLLIDSNGRTTGNR
>CP034351.1|AZM93743.1|248930_250091_-|ParA-family-protein
MTAPYDPEVREKVVAKLPASLRQELKVRAAQLGVDIQDAVTEGIHAWRADASAATPVDTSGASSFSTYLPTGLYGEFKDDCRTREIPYNQGVAQSIRLWLDTHPSPMGRRRPANEGARRVVVCNQKGGVGKSAISNGVSQALAETGARVCVIDFDPQGHLTRHLGAEMLGIKEPSLAKHMLGEIEGRVRDLLVPIEHGVFAGRLFLLPSCKDAFLLDARLATTRHVRTKETALEKALEELEKEFDYIVVDCPPSLGYTMDTALYYARTREGEAPKTSGIVVPVQAEDTSADAYDMLSEQLEDLIDDLDIDIAQLGFVVNLYDSRKGYVVTSSLNSWKEFGDPPVITVISDLKEQREAVRVKLPLLHYAPDCEQSEAMREIARRIAV
>CP034351.1|AZM93744.1|250301_250970_-|GDSL-family-lipase
MTITIRPGSTVMFTGDSITDCQRLESEDGLGFGYPLRVAGEWGFRHPDRPVTWLNTGISGHKVTDLEARWRTDVLDARPDLVSILVGVNDMGWHTIDPEGHVIPAEEFEAGYDRLLAPLAEAGTGLILIEPFLLAIRGVVEAGAARIGEGERKQWRTDLDPKIQAVRRLARRYGAHLIAADGMFAELSTTTGAGPEYWAADGVHPIPAGHAALAAAWLRLVA
>CP034351.1|AZM93745.1|251273_251501_-|hypothetical-protein
MRTTIGYTIESIGYVIGAQSLVGFVSRTFFGTEWGWLHKVVDLPSTAYLGVIAVGLALVAGGVTTRKTAGRQEAA
>CP034351.1|AZM93746.1|252511_253222_+|hypothetical-protein
MTSDPPARRRRGPRAVPAPTSAGNEAEYGDILAVLGQQLGEKVAEVAATADPGGRRRLKGVHFEYAADPKAVHDMAGGSGYSLASNWFTQLLAQLAVANSITKSQLCVFLFVAGGQVPGTGVTPYTQQEITDGLNKIAAQKGGKMITRSTVNRAVQALCGYNWVEKAGRGRIQLNVRLWFHGNSTAQHDVLAEIAGRHEHDVEAFPYAVGPQGAHQEELDLDFGAAADYRGRKRTG
>CP034351.1|AZM93747.1|253285_253705_+|hypothetical-protein
MANVMSPIVAERIWALPLSGSAVKFLQYLVSRSDFGGALAVRQKDMAAEYGVTPQAVSGLMAPLCELNIVLRPRSEERNGNSYRLHPLAAKYESPESMEAAFRAALVRIQAGDLPNLKLPTYHQAPPSPSAGRPKLQVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP034351_1	1.1\|244226\|57\|CP034351\|CRISPRCasFinder	244226-244282	57	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	244226-244282	0	1.0

1. spacer 1.1|244226|57|CP034351|CRISPRCasFinder matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

agtcccgcgccccatcgcctacccgggcacagccccacccggacccacaagaggccc	CRISPR spacer
agtcccgcgccccatcgcctacccgggcacagccccacccggacccacaagaggccc	Protospacer
*********************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034350

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP034352

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP034351

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection