CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034443	Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 chromosome, complete genome	3 crisprs	csa3,WYL,DEDDh,cas3	0	0	2	0

1. CP034443

CRISPR-Cas detection and classification

Crispr_ID: CP034443_2

• CRISPR_ID: CP034443_2
• CRISPR_location: 2760701-2760813
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP034443_2

Consensus_repeat	Method
TCGCCAAATCTCGGCCACTCGCGTTGGGAGGT	CRISPRCasFinder

spacers of CP034443_2

>2.1|2760733|49|CP034443|CRISPRCasFinder
AAACCCATGCATCGATACTTTGGACGTCACATCTCCGAATATCATCCAC

CRISPR arrays and Neighbor proteins around CP034443_2

CRISPR arrays

The CRISPR arrays of CP034443_2

>merge|CP034443|2|2760701-2760813|CRISPRCasFinder
TCGCCAAATCTCGGCCACTCGCGTTGGGAGGTAAACCCATGCATCGATACTTTGGACGTCACATCTCCGAATATCATCCACTCGCCAAATCTCGGCCCCTCGCGTTGGGAGGT

>CP034443|2|2|2760701-2760813|CRISPRCasFinder
TCGCCAAATCTCGGCCACTCGCGTTGGGAGGT	AAACCCATGCATCGATACTTTGGACGTCACATCTCCGAATATCATCCAC
TCGCCAAATCTCGGCCCCTCGCGTTGGGAGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP034443.1|AZN98137.1|2767676_2768510_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
CP034443.1|AZN98135.1|2765576_2766725_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226359
CP034443.1|AZN98141.1|2771880_2772759_+|phosphodiesterase	unknown	unknown	gnl|CDD|277347
CP034443.1|AZN98139.1|2769865_2770675_+|phosphodiesterase	unknown	unknown	gnl|CDD|277347
CP034443.1|AZN98121.1|2747590_2747779_+|hypothetical-protein	unknown	unknown	unknown
CP034443.1|AZN98127.1|2756406_2757234_-|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224651
CP034443.1|AZN98128.1|2757524_2758469_+|sugar-kinase	unknown	unknown	gnl|CDD|225518
CP034443.1|AZN98134.1|2764677_2765502_+|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224651
CP034443.1|AZN98126.1|2755132_2756410_+|FAD-binding-protein	unknown	unknown	gnl|CDD|130740
CP034443.1|AZN98124.1|2751595_2752051_-|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl|CDD|366690
CP034443.1|AZN98140.1|2770671_2771403_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|319828
CP034443.1|AZN98120.1|2745829_2746966_-|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl|CDD|225412
CP034443.1|AZN98133.1|2763049_2764528_+|DUF229-domain-containing-protein	unknown	unknown	gnl|CDD|293757
CP034443.1|AZN98129.1|2758465_2759455_+|glucosamine--fructose-6-phosphate-aminotransferase	unknown	unknown	gnl|CDD|240142
CP034443.1|AZN98132.1|2761668_2762970_+|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
CP034443.1|AZN98125.1|2753811_2754267_+|transposase	unknown	unknown	gnl|CDD|226077
CP034443.1|AZN98138.1|2768553_2769804_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270451
CP034443.1|AZN98122.1|2747765_2749835_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238206
CP034443.1|AZN98123.1|2751242_2751599_-|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl|CDD|377551
CP034443.1|AZN98136.1|2766726_2767677_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP034443.1|AZN98137.1|2767676_2768510_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.26706e-70
CP034443.1|AZN98135.1|2765576_2766725_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	4.03199e-126
CP034443.1|AZN98141.1|2771880_2772759_+|phosphodiesterase	gnl|CDD|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.39795e-58
CP034443.1|AZN98139.1|2769865_2770675_+|phosphodiesterase	gnl|CDD|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	6.71412e-68
CP034443.1|AZN98127.1|2756406_2757234_-|MurR/RpiR-family-transcriptional-regulator	gnl|CDD|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.24959e-59
CP034443.1|AZN98128.1|2757524_2758469_+|sugar-kinase	gnl|CDD|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	2.94508e-22
CP034443.1|AZN98134.1|2764677_2765502_+|MurR/RpiR-family-transcriptional-regulator	gnl|CDD|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.06793e-59
CP034443.1|AZN98126.1|2755132_2756410_+|FAD-binding-protein	gnl|CDD|130740	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.	7.2186e-98
CP034443.1|AZN98124.1|2751595_2752051_-|IS66-family-insertion-sequence-hypothetical-protein	gnl|CDD|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.42167e-09
CP034443.1|AZN98140.1|2770671_2771403_+|HAD-family-hydrolase	gnl|CDD|319828	cd07526, HAD_BPGM_like, subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH. This subfamily includes Escherichia coli YieH/HAD3 an 6-phosphogluconate phosphatase, which can hydrolyzed purines and pyrimidines as secondary substrates. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate, and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.15951e-52
CP034443.1|AZN98120.1|2745829_2746966_-|ImmA/IrrE-family-metallo-endopeptidase	gnl|CDD|225412	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism].	1.30159e-12
CP034443.1|AZN98133.1|2763049_2764528_+|DUF229-domain-containing-protein	gnl|CDD|293757	cd16033, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	5.54215e-87
CP034443.1|AZN98129.1|2758465_2759455_+|glucosamine--fructose-6-phosphate-aminotransferase	gnl|CDD|240142	cd05009, SIS_GlmS_GlmD_2, SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.	1.92265e-12
CP034443.1|AZN98132.1|2761668_2762970_+|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.74577e-67
CP034443.1|AZN98125.1|2753811_2754267_+|transposase	gnl|CDD|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.83657e-11
CP034443.1|AZN98138.1|2768553_2769804_+|ABC-transporter-substrate-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.0963e-83
CP034443.1|AZN98122.1|2747765_2749835_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	4.47602e-31
CP034443.1|AZN98123.1|2751242_2751599_-|IS66-family-insertion-sequence-hypothetical-protein	gnl|CDD|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	1.19539e-53
CP034443.1|AZN98136.1|2766726_2767677_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.03957e-75

Protein sequences

>CP034443.1|AZN98129.1|2758465_2759455_+|glucosamine--fructose-6-phosphate-aminotransferase
MIYRSTIARQPNQFRHTLEVVGTQLRDLDLAPFEKGTVVVTGIGASYEAAGVVAGELQRRGRRANTWRAVDLMEPGDPGDAIIVFSVGGRSIEPIAALTIHSTLPSLAITSGGNDPLSRTASAALRFESGPDSLPSSTGYTGSLLAGGLLIDALCGEDSFNWNDIPLIASEVLETSAKKMARIGEMFHDQRAIDCVGAISALGTAGEACLLIREAARVPTGVADTLHYLHGPMESMDQATGILIFGDGREVRLAQELAEIGCAVLLVTASESPQDAKNLAVVKVPSLQNRVGRSIVDILPAQLLAAELSDAAGLTDAQFRYSQNDTKVT
>CP034443.1|AZN98128.1|2757524_2758469_+|sugar-kinase
MGSISIGVDIGGTKTHLRSCLEQGMGRDLVVRTSEWRCGAYHHDIPGLIALISGFADGAAPNGIAIGSHGCDDEAECAIVQKPLSNHFACPLRVVNDAELFPLAMGLSSGIGVVAGTGSIAVARDQKGRMHVAGGWGWAIGDEGSAPGLVREAGRAVRRHIDLGGARSEPLVEALCEAFGLNSPTNIGTAIAKEGGASALGRHAPVIFYAANEGSSLAKRVIDEGAAALTQLVHHLKLAGVSDKDVVAGGGVILAQPLLANAFSHQISDRFGATVAVTFLDKPPVLGACVLARQLCSAGDGPETSIVSQHIDIQ
>CP034443.1|AZN98127.1|2756406_2757234_-|MurR/RpiR-family-transcriptional-regulator
MQEKILARLRSSQPSLSPALLRISEYVLNDPAKVVNQTITEVADGSGSSEASVLRFCRDIKFSSFQRFKLALGIELSTHQTIRHASPSGDVIDDTLSTAITALKQTKDLLNHAALELAAKQIIRAKSIDLYGFGGSANVARYAHYLFVRFGLVSRVLDDPHLAVMSAVNLGPKQVALAISESGSSKDTINSLMAAKAAGAFTIAITCHIRSPIAANADAVLGASSTDTPITRGAFSRVAGQYLIIDILANMIAKDGSKFQAAMQRTAEATIDKSF
>CP034443.1|AZN98126.1|2755132_2756410_+|FAD-binding-protein
MPSSETRAQTLGPSMIWRNWVSNQVCRVKHFEMPSSDDDVCRTIKTAASTNLRVRVVGTGHSYTPIVPTDGVLISAERLTGIENIDPTNGSVTLRGGTRICDVGLELRSAGWALPNQGDIDLQTMSGAVSTGTHGSGDSLQCLAGPIIGMRIAMGDGSIANFDASQDIDVLNAAKVCLGMLGVVLSVTMKLVPAFDLHDKIWREDFEECMDHLDQLCQENRSLRVFWCPTEHSASLYSLPDTSGIGRTRSKADVCEIRTLNVTTQPSAAVEAQAGERIGPSYRIFPGSIPMPNHNECEYSVPYEDGPAVLREIRKLIQTKHPSQIFPVEYRTVAADDIWLSPYFERKTAMISVSGAAGEDYWDFIRDCETIFSWVKGRPHWGKLHSLGRSEIEGLYPRYGDFISQRARFDPDGRFLNDYLRERFS
>CP034443.1|AZN98125.1|2753811_2754267_+|transposase
MTAIDDPTRFRRSRDVAAYFGLTSRRWQSGSTIDIQGRISKAGDADVRRALYEAASGLMTRFKGRDKVKSWGRDIAKRSCHRKACVAVARKLAVIIHAMWSDGRLRRRCGRERGRCHAARPCQGPQAAGSASMSGAAADKTHGAGALTDPI
>CP034443.1|AZN98124.1|2751595_2752051_-|IS66-family-insertion-sequence-hypothetical-protein
MGIGDRLVSGLDLTLDPERQLRRFEVINGAGGRRHWSVDDKARIIAETLEPNAVISEVARRYGLRPQQVFAWRREACKPATSVQQDSPAFVPAVLAAAEPVASRSPKQRKRQATRGAGMIELEIDGISMRVGRGADTKTVAAVIRALKATS
>CP034443.1|AZN98123.1|2751242_2751599_-|IS66-family-insertion-sequence-hypothetical-protein
MIGPTGAVKVMVATKPVDFRKGAEGLAALVRETMGADPFNGAVYVFRAKRTDRIKLIFWDGTGVCLYAKRLEDGEFRWPKVHDGMMRLTAAQLSALLEGLDWRRVHEARRTRVPAQAG
>CP034443.1|AZN98122.1|2747765_2749835_+|helix-turn-helix-domain-containing-protein
MTSGNLIPTAVLKRKAVVYVRQSTQAQVQLNLESQRRQYELVDVARRWGFRKVEVIDEDLGRTASGAVERPGFERLVDDLCTGHVGAVLCLEASRLSRNGPDWHRLLELCGEVDARVIDLDGVYDPGLPNDRLLLGMKGSISEFELGVLRARMYEAARAKAQRGELRISVPFGYVWHRDYGLGFDPDMRLQETIHLIFARFRELGSARQVLISMIDDGVHFPRPSDGKKMVSFDWVPIRYRNVISILKNPFYAGAYVYGKSEKRTEIVDGRVRKSYGHYKPASEWAVVLKDHHEGYIGWSEYERNQELLAANAYGKAGGVKSGRGGRALLPGLISCGRCGRRLVVMYAGRGQGYPVYRCERGNLMMAQARCMSFNGFRTDAAVTREALEAVAPMAIEAALEAERMQLESEAKRRQMIEMDLQQARYEASLAERRYAACDPENRLIAAQLERSWEATLRRVETCEAQLSEVQRVEPVDAVPDFTGLAQDLEASWNAPGVDMRCRQQLLRALIKDIVADVDDDARDVILTIHWHGGQHSQVRVRKPKSGEHGQRTPEEALAIMRSMATRWSDAEIAATLNRMGMQTGQGKTWTARRVQSLRTVHKISGYRSSDKNGEWLTMSDAAAKLGVSHVKIRRFIRDGLLPAEQVMRGAPYQIRASDLEDERIKADLARNTPRRIHDDNQESLFSAI
>CP034443.1|AZN98121.1|2747590_2747779_+|hypothetical-protein
MRTLPPPTRSLEVVRQLSLPLDSQKLNGLSSTQRTIVIARLANVLRAAAGVATEEESCDDER
>CP034443.1|AZN98120.1|2745829_2746966_-|ImmA/IrrE-family-metallo-endopeptidase
MPLKLTPRPSAVESIRRARRLSIEAVAIEANIRPDFLTEMETTPTDVSKRVAFSLASALAVPVQFLFAKDVEIDANMPDFRAANNRPAVLTSAGLTRIARARSIAAYLADRAFEDCTRFANTNSVTIHQQSTARKLLKSLYVRVQRVDGSVDPTLTFRETRVSLERKGIIVLCDRVADPFRGFCYSPTGDFPIIFVNTTGQRPATKLFTLMHEVVHVLLGKTGVSDPAILNNQVERFCNSVTASVMMPAEEFSQAYKSVAGRGARAVVDLLSRRFGASKQASALRVSDLGLSKGFYAAWSATLPSEVPMIEEEDEGEENSGGGGISSQIARFGYLLPNMLTAAVDRKAISQFDAYRLTNLKPSTIKQIAAIGVNRLGP
>CP034443.1|AZN98132.1|2761668_2762970_+|sugar-ABC-transporter-substrate-binding-protein
MRYLGILAVAFGVAVGGGATAQQRYDGAKIKILSTNSAYDLELKKFAHEFTEKTGAEVQFDLFGYAPTVQKVSVELLTRSDSYDVVYLGSEEFGRYASGDILEPLDNYIDMKSADVQDFIDPVLRLYNKDGKQLAFPHFAATQLLYYRADLFEKAGIKQPPQTWEEFRNDCDLLRKADIQCTALRGQPDTGENIWFWGQVLYGFGGKYFADEPADLTPTVNSPAAVEALKWYTDVMTNFTVPGSISATFDDVVIAMQQGRIAMTVEGAPTAGRILDPKLSKVVGKLGFALPPGGVSGRFPPFAGQAYVIPAASENKAAAAAFLQWATSKDLMKRISLDSTFVAITRTSLWDDPEIRAKHDYDYGHGSFAATYAETLRGAPEWYYPRIPEFKEIGDRLGRALQEAVVRSKSPEAALDDAQGDAVEIVKRAGYLK
>CP034443.1|AZN98133.1|2763049_2764528_+|DUF229-domain-containing-protein
MRNFSIVWICSDQQRWDTLQCLGFKGTQTPNIDRLAARGTAFARAYCQSPICTPSRTSFLTGLYPIAHQVHQNGAGTFPSHLVLLPKLMANAGYYTGHIGKLHLSATRGMIEKRPDDGFAEFYWSPEPFPEWSGNHDYHAWMWSKGINPEAYFKPYLDQHYGPGPAAEYRQARWAGDRAERFIKMHSDRSWYLGVNIDAPHPPLNPPPDYLRRFNPNDMPDPAFKPIDLEHQKKFERVDQQAKFAVDPWHAATDAGEAHNDELAGPTHEAPPTKFNIWEMRAAYHAEVAQVDDLVGRILDTLTETGQLDRTIIVFMSDHGDMMGDHGLLYKGCRFYEGVVHVPLVISVPGSPAQGSVSNALVELVDIAPTLLSLSGLEVPKAMQGLSLDQMLLGNTSLDCHKPYVVSEYHNSLRFRGSRGSRASMYYDGRHKLNVYHDVGIGELFDHKEDPNEHYDLWDSHHHRGLKYDLLGRSFSAMMLRSGSGPERIEDY
>CP034443.1|AZN98134.1|2764677_2765502_+|MurR/RpiR-family-transcriptional-regulator
MSVNSPAMKAASHESILARLQDDIDRLPNALARIAKYILENPEKVLHQSVAELGEFAASGEASILRLCRQIGFSGFRDFKLALAAEIGRPGLPPTAAGTADSALQSLHDTMAQNLSIAHNNADSETLAKVAAALAASRRIDLYGAGMSGITAELLAYRLLRVGLTAFAFRNSNMAHEVASGLSPGCVAIGLSISGLTVDTVQFLKGARSAGALTVAITNRARSPLEKAADFTLQASGLQDHPIGGTLTSTIGKIFVIESLMLALGKAMDKPVAK
>CP034443.1|AZN98135.1|2765576_2766725_+|ABC-transporter-ATP-binding-protein
MAALDLHIDDIGKRFGAIDVLRGICLRVAAGEFVTLLGPSGCGKSTLLRIIAGLERADQGHVRAGGRGLDAVAPKDRDLAFVFQSYALYPHLSVHDNIAAPLVMRELSSLERLPVIGALLPGAIQRKRSIQERVRQTSGLLKLDALLERRPSALSGGQRQRVALGRAMVRKPKIFLMDEPLANLDAALRIHTRGEIARLHKEMETTTIFVTHDQAEAAALSDRVAVIFGGELRQVAAPADLYREPVDLDVARFLAQPFLNELAVAAPIGGGLMIGGSRIIIRDALGSGLAGTLAFRPEHATLAEKDHPGALPVRVTRIEHAGIDAHVFVDAEAGAQFVARISAERARSLRDGDNLGLTIDAERAWFFPSNGSRQRGDHSGAV
>CP034443.1|AZN98136.1|2766726_2767677_+|sugar-ABC-transporter-permease
MALANDIPLSSLAPNTAGRYRPARAQAQAGIILSVPATLLLVALVIGPAILVFFLSFTNASLGLAGIQFIGVANYTRMLTDPGFAQSLRNTALYVAVVVPTAIGWGLLVAVLIARSRFAVLYRTAYFLPVAASLVALATAWEAILHPSLGFANTLLQLLGASPVRFLSDPATAIYALAAIGVWQLVGFNMILFLAGLSTIPEELYEAATIDGADRGLKRFLLVTWPMLAPVTVFVTVMTIIRAFSVFETVAVLTQGGPMKSTSVVLYTFYEEGFRFFRVGYASAISVSFFVFVTFLSLVQMRVSERRARWKANGGQ
>CP034443.1|AZN98137.1|2767676_2768510_+|carbohydrate-ABC-transporter-permease
MILGQSSSSRIVSHAVLVTGAIIMVFPFLWMILASLTPQSEIFDGSLLPTPTLHGAIDNYGTALSAIPLLRFMANGFVVCLAILVLQIAIAIPCGYALAKLSFPGRPILLVGVLLGLLVPVQIPTIPIYIALAKSGLLDSYAALVLPWIISVFAIFLFRQFFVTFPDEVLDAARLDGFSELSIAWRIMLPAAWPAVVSFSIFSIVAHWNDLYWPMVVITNPDMMTASLGIAYFRQAGEGAGNVGALMAGGVLVTAPLVSFFLLMQKHFIRGLVLGRH
>CP034443.1|AZN98138.1|2768553_2769804_+|ABC-transporter-substrate-binding-protein
MKTVAMILAAGVAAAAMPAQAETKLNVYYAWPEHEVIHKPIADRFMADHPEIKISFRAAAPSYDEAVQTLIRQSMAGELPDVHYVGFNVLRPLVTRGLVKPIDDLVAADHLADKGYTEQILSLARIEGHLYGLPFAMSTPVVYYNADLVKQAGGDPDKVPTDWDSFVALAGKVGALGNGTSGMYYQLGSDDWATQNLVRNFGGQMMNDKESDIAFDGPAGQAAVKLFKRFHTDGAQPAIDSHAARQLFTSGKLGFFFASAGSVSGFEGEIGDRFKLRTAKQPLGAEDATMPTGGMVAIILTDDPAKRAAAWDYVKFTTSPEGQSIVVPNTGYMPTNTLALDKDHLAGFYDKHPNWYTSVLQTPRARPWFSWPGDNGVQIGEVLRDEMTAIALGSKEPEAALADMVSEVRALLPKTN
>CP034443.1|AZN98139.1|2769865_2770675_+|phosphodiesterase
MKLIHLTDPHLVPLGAMLFGFDPAQRLRKTIERINRDHADAELCVVTGDLTDEGDFASYVLLREVLQELRVPARLLLGNHDSRENFVRAFPGEPRDENGFIQSVHDGSAGRLIFLDTLVEGFGHGSLDDGRLEWLLARVAEASDVRAYLFVHHPLQPIGLPHFEPWSTENWRPIMQAIVSAGNVRHIFHGHVHVDVGGTWSGIPFSANRGVAHQIIPHFTRRDADFVEDAPAFDIAIIDVDGVLVHRFEVSDRHVVEVSAEGWVPEGMQ
>CP034443.1|AZN98140.1|2770671_2771403_+|HAD-family-hydrolase
MNQQASYELVIFDCDGVLIDSETLASRIDAEELTRIGYPMSYSDVILRFTGLSSATMRKMIEEDWGRPLPSDFDVIVQSRIKESYQTELQAISGIDQLLHQLRLPRCVASSSAPDKLRLGLELTELWAYFHPHVFSSAMVKAGKPAPDLFLFAAAQMGTKAARCVVVEDSIAGVRAGVAAGMMVIGFTAGGHCHDDHGQRLLSAGAAVVARSAEELSVLLMTSEVQPNTKWQEADPVAAGAVR
>CP034443.1|AZN98141.1|2771880_2772759_+|phosphodiesterase
MVTTTTTIKWPDAAAVSCPTSSQGRAQSECGAMQKIIHITDPHFVAPGKTLYGIDPAQRLRDTLDHVSRVHADAKLILITGDLADTGDPAAYALLREILSEVRLPVHLTIGNHDDRGAFRGVFGGEGFVQAAVDLHDWLVVLLDTKDDISHFGCLDGGRFEWLQDQLFRAAGRPVVVAMHHTPADLHVPCFKTSDMKESDRLLSILRKNASVRHMLFGHRHVAAAGSLSGISFTASRGTAQHIVLDWEQYGKPIFVAAAPSYDVVMLDGSDVVVHRHEGLDQLPVIRPGDPK

Crispr_ID: CP034443_3

• CRISPR_ID: CP034443_3
• CRISPR_location: 3912904-3913034
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP034443_3

Consensus_repeat	Method
CGGCAGGACAGAGGGGGCGCGAAGGATCGCCAGCGTT	CRISPRCasFinder

spacers of CP034443_3

>3.1|3912941|57|CP034443|CRISPRCasFinder
GGTTCGGCTTGGACCTGCCAAACCTATCTGAACGCACCGTTTCGATTTATTGAATGT

CRISPR arrays and Neighbor proteins around CP034443_3

CRISPR arrays

The CRISPR arrays of CP034443_3

>merge|CP034443|3|3912904-3913034|CRISPRCasFinder
CGGCAGGACAGAGGGGGCGCGAAGGATCGCCAGCGTTGGTTCGGCTTGGACCTGCCAAACCTATCTGAACGCACCGTTTCGATTTATTGAATGTCGGCAGGACAGAGGGGGTGCGAAGGATCGCCAGCGTT

>CP034443|3|3|3912904-3913034|CRISPRCasFinder
CGGCAGGACAGAGGGGGCGCGAAGGATCGCCAGCGTT	GGTTCGGCTTGGACCTGCCAAACCTATCTGAACGCACCGTTTCGATTTATTGAATGT
CGGCAGGACAGAGGGGGTGCGAAGGATCGCCAGCGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP034443.1|AZN99012.1|3919816_3922045_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl|CDD|223394
CP034443.1|AZN99008.1|3916455_3916935_+|SsrA-binding-protein-SmpB	unknown	unknown	gnl|CDD|235455
CP034443.1|AZN99009.1|3917038_3917779_+|lysozyme	unknown	unknown	gnl|CDD|119375
CP034443.1|AZN99013.1|3922182_3922761_+|orotate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|273579
CP034443.1|AZN99000.1|3902761_3903874_-|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl|CDD|181255
CP034443.1|AZO01460.1|3917747_3918398_-|uracil-DNA-glycosylase	unknown	unknown	gnl|CDD|381681
CP034443.1|AZN98998.1|3901392_3902052_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380061
CP034443.1|AZO01461.1|3922772_3923153_+|VOC-family-protein	unknown	unknown	gnl|CDD|319916
CP034443.1|AZN98997.1|3900123_3901287_-|isovaleryl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173845
CP034443.1|AZN99010.1|3918421_3919003_-|NYN-domain-containing-protein	unknown	unknown	gnl|CDD|350235
CP034443.1|AZN99007.1|3915548_3916430_+|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl|CDD|235107
CP034443.1|AZN98999.1|3902207_3902711_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224759
CP034443.1|AZN99011.1|3919303_3919705_+|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl|CDD|234744
CP034443.1|AZN99002.1|3905949_3906879_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376773
CP034443.1|AZO01459.1|3913157_3915215_-|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl|CDD|381604
CP034443.1|AZN99001.1|3903994_3905668_+|sulfotransferase-family-protein	unknown	unknown	gnl|CDD|379204
CP034443.1|AZN99005.1|3910530_3911601_+|site-specific-integrase	unknown	unknown	gnl|CDD|271177
CP034443.1|AZN99004.1|3909150_3910290_+|porin	unknown	unknown	gnl|CDD|308243
CP034443.1|AZN99003.1|3907071_3908256_-|porin	unknown	unknown	gnl|CDD|308243
CP034443.1|AZN99006.1|3911663_3912551_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP034443.1|AZN99012.1|3919816_3922045_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl|CDD|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
CP034443.1|AZN99008.1|3916455_3916935_+|SsrA-binding-protein-SmpB	gnl|CDD|235455	PRK05422, smpB, SsrA-binding protein SmpB.	2.19449e-86
CP034443.1|AZN99009.1|3917038_3917779_+|lysozyme	gnl|CDD|119375	cd06413, GH25_muramidase_1, Uncharacterized bacterial muramidase containing a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.	6.31764e-98
CP034443.1|AZN99013.1|3922182_3922761_+|orotate-phosphoribosyltransferase	gnl|CDD|273579	TIGR01367, Orotate_phosphoribosyltransferase, orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	6.75719e-77
CP034443.1|AZN99000.1|3902761_3903874_-|pyridoxal-phosphate-dependent-aminotransferase	gnl|CDD|181255	PRK08153, PRK08153, pyridoxal phosphate-dependent aminotransferase.	0
CP034443.1|AZO01460.1|3917747_3918398_-|uracil-DNA-glycosylase	gnl|CDD|381681	cd10031, UDG-F5_TTUDGB_like, Uracil DNA glycosylase family 5, includes Thermotoga maritima TTUDGB and similar proteins. Uracil DNA glycosylase family 5 includes Thermus thermophilus HB8 TTUDGB (also called UDGb) which is not only a UDG acting on double-stranded uracil-containing DNA, but also a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA (except for the C/I base pair), as well as a xanthine DNA glycosylase acting on both, double-stranded and single-stranded xanthine-containing DNA. TTUDGB also excises thymine from G:T mismatched DNA, and removes analogs of uracil from DNA, including 5-hydroxymethyluracil (hmU) and 5-fluorouracil (fU). This subfamily also contains Bradyrhizobium diazoefficiens family 5 homolog Blr5068 (UdgB) which has been found to efficiently excise uracil from ssDNA and dsDNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Similar to family 4 UDGs, members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	3.3592e-110
CP034443.1|AZN98998.1|3901392_3902052_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	3.33221e-25
CP034443.1|AZO01461.1|3922772_3923153_+|VOC-family-protein	gnl|CDD|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.79032e-57
CP034443.1|AZN98997.1|3900123_3901287_-|isovaleryl-CoA-dehydrogenase	gnl|CDD|173845	cd01156, IVD, Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates.	0
CP034443.1|AZN99010.1|3918421_3919003_-|NYN-domain-containing-protein	gnl|CDD|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	6.68467e-63
CP034443.1|AZN99007.1|3915548_3916430_+|4-hydroxy-tetrahydrodipicolinate-synthase	gnl|CDD|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.03446e-170
CP034443.1|AZN98999.1|3902207_3902711_+|MarR-family-transcriptional-regulator	gnl|CDD|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.4858e-06
CP034443.1|AZN99011.1|3919303_3919705_+|DNA-directed-RNA-polymerase-subunit-omega	gnl|CDD|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	1.85576e-26
CP034443.1|AZN99002.1|3905949_3906879_+|IS110-family-transposase	gnl|CDD|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	6.53507e-11
CP034443.1|AZO01459.1|3913157_3915215_-|lytic-transglycosylase-domain-containing-protein	gnl|CDD|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	1.91722e-62
CP034443.1|AZN99001.1|3903994_3905668_+|sulfotransferase-family-protein	gnl|CDD|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	6.91524e-46
CP034443.1|AZN99005.1|3910530_3911601_+|site-specific-integrase	gnl|CDD|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	7.10935e-47
CP034443.1|AZN99004.1|3909150_3910290_+|porin	gnl|CDD|308243	pfam02530, Porin_2, Porin subfamily. This family consists of porins from the alpha subdivision of Proteobacteria the members of this family are related to pfam00267. The porins form large aqueous channels in the cell membrane allowing the selective entry of hydrophilic compounds this so called 'molecular sieve' is found in the cell walls of gram negative bacteria.	3.21132e-110
CP034443.1|AZN99003.1|3907071_3908256_-|porin	gnl|CDD|308243	pfam02530, Porin_2, Porin subfamily. This family consists of porins from the alpha subdivision of Proteobacteria the members of this family are related to pfam00267. The porins form large aqueous channels in the cell membrane allowing the selective entry of hydrophilic compounds this so called 'molecular sieve' is found in the cell walls of gram negative bacteria.	2.08827e-107
CP034443.1|AZN99006.1|3911663_3912551_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.98727e-18

Protein sequences

>CP034443.1|AZN99006.1|3911663_3912551_-|alpha/beta-hydrolase
MPSTEGFSDFFYASPDGLQLHARVYGEANSGHWPVVCLPGLTRNCRDFHELAVHLSTRAERKVVAFDYRGRGQSAYDPDISHYTVGVEAGDILAGLAALGIEDAAFIGTSRGGLIIHVLGAMRPVALKAIVLNDIGPVVEAGGLAHIRSYLDRAPKPKTRTEAVGAQRGAHGSDFPGLAEADWERMVSALYRETAEGLMPDFDPKLVDTLAGLDLSQKLPDLWPQFEALAAMPLLAIRGANSKLLSAETLEQMRKRHPCIETIMVEGQGHAPFLETGGLPGAIAAFLDQAELKFR
>CP034443.1|AZN99005.1|3910530_3911601_+|site-specific-integrase
MMTTEAIQEDEPSDHFSIFSSQTAKIKYSYNKIREVKSYRVGELFSAYRDILWDDGRHKYNVSSFIGEIDEILLGERFSAFDQSTLDNLIGTLRQRGNSNATINRKMAALSKLLRKAHKMGDIHSLPEFRRQKERAGRIRFLEREEEAQLFAAIKKRSEDAYRLSVFLVDTGCRLGEALGLIWNDIQEHRVSFWITKSGRSRTIPMTERVKEVIKLPVTEGRRPKGPFTKLSQAQFRAIWNDAKAEIGLGADDQVVPHILRHTCASRLVQGGIDIRRVQMWLGHQTLSMTMRYAHLATNDLDGCVTVLETPRGGAAAGSAESSVFSSPLTAPSASPSDHKAEPVVAKAPRKGSKAK
>CP034443.1|AZN99004.1|3909150_3910290_+|porin
MNIKSLLLGSAAALVAVSGARAADAVVVAEPEPAEYVRICDVYGAGYFYIPGTETCLRIGGYVRYDIGVGDVGAFTGAENGDAEDGDLQNTYRKRARFTLKTWTGQETELGTLKTYTETRFNFNNANDYLFYNDADNSGASLNFAWIQLGGLRVGKDESAFDTFIGYAGNVIQDTLVPYGGFDTNVVQYYFDAGNGFSAVVSLEEGYGDLFTIDSYVPHVVGGLKWTQGWGAITGVIAYDSNYEEVSGKVRLDITPMENLSLFIMAGYGTDDNLTDVTWAKSAGGRGMYKLWSGNWAVWGGGTYTINEKTSFNVQASYDEGENLGIAANIAYDVVPGLTITAEVDYVHAGEFGEPGFDNWTNADDEDSFGGMLRFQRSF
>CP034443.1|AZN99003.1|3907071_3908256_-|porin
MNIKSLLLGSAAALVAVSGARAADAVVVAEPEPAEYVRICDVYGAGYFYIPGTETCLRIGGYLRYDIGVGDVGSFDGATNWDREDGDENDTYWKRARFTLKTWTGQETELGTLKTYTETRFNFGNSQGRADFDDNGTPDDPADDILFGNDADNRTVSLNFAWIQLGGLRVGKDESAFDTFIGYAGNVIQDTLVPYGGFDTNVVQYYFDAGNGFSAVVSLEQGYGDFTIDSYVPHVVGGVKWTQGWGAITGVIAYDSNYEEVAGKVRLDVTPMENLSLFIMAGYGTDDNYTDDTWAFPAGGRGMYKLWDGNWAVWGGGTYTFNEKTSFNVQASYDEGENFGLAANVAYDIVPGLTITAEVDYLHAGKFGEADFSNWTGADDEDSIGGLLRFQRSF
>CP034443.1|AZN99002.1|3905949_3906879_+|IS110-family-transposase
MAFLHQQPQLCLGLDIAKDTITASDGITTCTIANQRRAIRTLLKSHKQVDLVVCEPTGGHERLLLEECLRTGIACHRADTLKVKSFIRSYGTHGKSDAIDATMLRAYGRERWEKLSLWQAPDPDEVRLRALVRRRQELIAIRGAEKNRAKAPSGRDLAASFEAVEHQIQAIEAAMRELIANSSTLRQRAAICTAMDSLGTIVAAKLLAILPELGSMTRRKAAALAGVAPHPNDSGLKRGYRKIRGGRPDVRSTLFMPALRAAAGHGEFAVFYKHLVANGKKPMVAIAAVMRKIVITLNARLRDATIPQS
>CP034443.1|AZN99001.1|3903994_3905668_+|sulfotransferase-family-protein
MNNRLPPAWSKHLKPGPAPKAKVPIVKPIVKQGDAQSRAQADDALLKQAYMLQQAKRLDEAQDLCLRVLARTPNHPLALYILGTLGLGYDDEKALRYFARAVGEEPANPYYHLSLGELYLKLSEYTPAIKHMQHALELRPDLVEALCALGRAYIAFDKPDMALPLYEKALKINRDHPKVRAGLASALSGLGRMDEAAVYLKEAIERRIEVPRAYNDLVQTRKFTEEPVELQSIQRELASPKLDPAGAQQLHHAAGKVLNDLKRYDEAFDHFNRAKQASGYKFDIDLYRRWIDSMIETFTPDFLAARAGHGNPSEVPVFVVGMPRSGTTLTEQICASHPDVHGAGELSKLMRVANAIGLTNRSLGDVAQSIKSITADLSRTLAEEHLSYLRERAPSALRIVDKTPHNFELIGLIGLLFPNARIIHCRRDAIDNCVSCFVQNFSEGHSYNTDLKTLGLYYREYDRLMRHWNEVFPGLIFENRYETLVDDQEAQSRRLIEYLGLPWDDACLRFFDRDGSVNTPSRWQVRQPIYKSSVKRWKNYENEIQPLIQSLGDLAEI
>CP034443.1|AZN99000.1|3902761_3903874_-|pyridoxal-phosphate-dependent-aminotransferase
MRQRPPLTPIIGALPSTVPFVGPEAQERDRGRAFRARIGANESSFGPSPRVIARMAGIARDMWMYCDPDNHDLKVAVAAHLGVSAENVVVGEGIDGLLSLVARMYVAPGDAVVTSLGAYPTFNFHIAGVGGRLVAVAYENDRESLDGLLAAVAKENAPLVYLSNPDNPMGSWWEAAELIRFIEALPETTMLVLDEAYGELGPASALPPIDVSRPNVIRMRTFSKAYGLAGIRCGYAVAEAQVIRDFEKIRNHYGVSRMAQVAGVEALADQDYLQSVVTRVAAGRRRIAEIAEANGLKPLPSATNFVTIDCGRDGAFALKVLQALLARDVFIRKPMAPRLDRCIRVSVGLDHELDIFAEELPGALAAARGN
>CP034443.1|AZN98999.1|3902207_3902711_+|MarR-family-transcriptional-regulator
MPDERSAMVTEIRHFNRFYTSLIGLLDETLMQSAYTLTEARVLFEVGHRAGAVAANQSGEAGFLARAFHLDLAQPASSIAGELRLDPVYLTRILRKFAAMGLTELRADPYDRRRRILSLTARGNSELATLQAAVDRDLTRLTASLADNEAAELSDTLKRVVRLLGGG
>CP034443.1|AZN98998.1|3901392_3902052_-|TetR/AcrR-family-transcriptional-regulator
MARTTGSDGEKTEAAVREAAVALIARLGYEAMSMRQLAAEVGVQAAALYRYFPTKEDLLFTLMREHMEGLIEAWDAARPTGADPATRLAAYVENHIAFHIERRHSTHVSNMELRSLSHDRLTQILKQRTAYEKELRAILRDGSEAGAFSVDDTGLTAMALIQMMTGVIVWFRPGERLSISEVTATYLSMTMRLVGATHGATTSYSAARPFGRSKDAVAL
>CP034443.1|AZN98997.1|3900123_3901287_-|isovaleryl-CoA-dehydrogenase
MYTHTLNFGLDEDIEALRDLVQRFAQEKIAPIAAEIDRSNEFPAHLWAELGALGLLGITADPDFGGTGMGYLAHVVAMEEISRASASVGLSYGAHSNLCVNQINRWATPAQKEKYLPALCTGEKVGALAMSESGAGSDVVSLKLRAEKRNDRYVLNGTKMWITNGPDAETLVVYAKTDPELHSRGITAFIVEKAFAGFSVAQKLDKLGMRGSNTGELVFENVEVPFDNVLHEEGRGVEVLMSGLDYERAVLAGGPIGLMAACLDVAIPYVHERKQFGQPIGEFQLVQGKLADMYTVMSAARAYVYAVAAACDRGQTTRKDAAGCVLFAAEKATLMALDAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRWLIGREIMAEGT
>CP034443.1|AZO01459.1|3913157_3915215_-|lytic-transglycosylase-domain-containing-protein
MPTRQPHFFALLGATLLLTPIIVAAGTVDAQFTAAIPVPNLQNNGLKDSGRPDPDGSPSASVARLKSGLDALAANDIAGARQVREALPVNSLDQHILAWAIAIHGGDKVPSGDIADAAKMLPNWPGMIALRKNSERALYRENPAPEIVVQAFGGSQPLTVEGVAILARSYVSQGNVKAARSVLSPFWRTEKLEAKDEADIIQEFGKLIPAADHRLRMERMFYADRVNSALRVAGLAGAQQLADAWAAVSKGDKNAAKLLKAVPAVQRSAGYVFAQAEYLRKQEKFSDAAAMMMRAPSDRNALVDPDAWWAERRVLSRELVDQGDMKTAYKIVAAHAAESAANAADAEFHAGWYALRGLNDPDTAAKHFARIADLAQGPMSLSRAYYWLGRAAEAGGPGSAKDHFTRAAGYGTTFYGQLAGERVGRRALNISYPEPSATDRRNFANREAVSAIKRLQEAGYERYADTLYRDLAGQLTSPGELALLAMMAEKQGNHFLALKVGKIAGARGIDVGALSHPLGVIPDTADISGSGKALAYAIARQESEFNIGAVSGAGARGLLQLMPGTARQLAKKAGMAFSQARLTTDAGYNATLGAAFLGEQLGRFNGSYVLTFAGYNAGPNRAAQWVARYGDPRGKDIDAVVDWIERIPYTETRSYVQRVMENYEVYKMRISGKYDIVGDLVNGRG
>CP034443.1|AZN99007.1|3915548_3916430_+|4-hydroxy-tetrahydrodipicolinate-synthase
MLRGSLTALVTPFEKSGRFDEKAFRAFIAWQIAEGTTGVVPVGTTGESPTLSHDEHRQVVKVCIEVAKGRVPVVAGAGSNNTEEAVGLVQYAEKAGADAALVVTPYYNRPTQRGLYAHFAAVAKATSLPIIIYNIPPRSVVDMTPETMGQLRHDFKNIVGVKDATGKVERVSEQRATCGKDFIQLSGEDASALGFNAHGGVGCISVTSNVAPRLCAEFQEATLSGESTKALELQDRLLPLHKAIFLEPGVSGAKYALSKLGKVENVLRSPLVTVEPSTAEKIDAAMKHAGLIN
>CP034443.1|AZN99008.1|3916455_3916935_+|SsrA-binding-protein-SmpB
MNQVRKADPNNKTVAENRKARFSYEVLDTIEAGLVLTGTEVKSLRQGQANIQDSYASVEGGEIWLINSYLPEYLQANRFNHEPRRRRKLLLNKREMAKLSQSVDREGMTLVPLKIYFNDQGRAKLLLAVGRGKKLHDKRETEKQRDWSREKGRLLKERG
>CP034443.1|AZN99009.1|3917038_3917779_+|lysozyme
MKNRIVLWGAASLILGGLVAVGLYLYFHAFSPDRGKYPVRGIDVSHHQRQIDWRRVAADDVAFAVIKATEGGDHVDDAFDANLREARAAGLAVGAYHFFTFCRPGADQAKNFISVVPRDQPLLPPVVDIEFHGNCPRRPSPEELQVELSAFLGPVEAAFGKTAILYVTDAAARAYAGQIAGRPRWVRSLVLQPGHDDWIYWQYHDRGRVDGISGDVDLNVLQGGQATLAALFAAPESISPETLLSR
>CP034443.1|AZO01460.1|3917747_3918398_-|uracil-DNA-glycosylase
MAASPEPDRDCPLCPRLHDFIAEWRQREPSWFNAPVPTFLPPEGEDAVRLLIVGLAPGLRGANRTGRPFTGDYAGDLLYNTLIAHGFARGQFKARPDDGLELVGTAITNAVRCVPPENKPVGAEIATCRTFLVPTIARFKNLRAVLALGSIAHQSTVRALGGRVAAYPFRHGGQQQAGGVTLFSSYHCSRYNTNTGVLTEAMFVNVFSEIEAFLGK
>CP034443.1|AZN99010.1|3918421_3919003_-|NYN-domain-containing-protein
MFDPREKIALFIDGANLYATSRALGFDIDYRKLLASFQKRGYLLRAYYYTALVEDQEYSSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALEIADVVDHYVIFSGDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLMTLKSEVGRDPSERPVRRPEPAEADEDDY
>CP034443.1|AZN99011.1|3919303_3919705_+|DNA-directed-RNA-polymerase-subunit-omega
MARVTVEDCIDKVDNRFELVLLAGHRARQISQGAQITVPRDNDKNPVIALREIAEETLSPDDLKEDLIHSLQKHVEVDEPEADGEAIADQTGTAVAATDADDAEDNIAFDRMTEEDLLAGIEGLVPPEKSDDY
>CP034443.1|AZN99012.1|3919816_3922045_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MMRQYELVERVQRYKPDVNEALLNKAYVYAMQKHGHQKRASGDPYFSHPLEVAAILTEMHMDEATIAVALLHDTIEDTTATRAEIDELFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHVPEAKRLRIAEETMDIYAPLAGRMGMQGMREELEEIAFRFINPEAHRAVTARLAEIFERNKGVLSEIEKALSTLFEKYAIKAEVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVVVETVEDCYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTIVGPSRQRVELQIRTYQMNKIAEYGVAAHSIYKDTGGKVNGAAHAISKETNAYAWLRRTIEQLAEGDNPEDFLENTKLELFQDQVFCFTPKGTLIALPRGATPIDFAYAVHTDVGDTCVGAKVNGRIMPLMTELKNGDEVEIIRSKAQVPPAAWESVVVTGKARSAIRRATKNAIRKQYSGLGIRILERAFERSGKTFTKESLKSVLHRLARKDVEDVLASVGRGELASTDVMKAVFPDYKDERVTLATPKQREEGWSKIRNAAGMLFQIPGRAARKDKDQPKDGAVPIRGVRGDLPVRFAPEGAVPGDRIVGIVQPGTGITIYPIQSPALQAFDDQPERWIDVRWDIDERTKERFPARVSVTAINAPGSLADIAQVVASNDANIHTLSMVRTAPDFTEMLIDLEVWDLKHLNRLLSQLKDNSSVSDARRVNG
>CP034443.1|AZN99013.1|3922182_3922761_+|orotate-phosphoribosyltransferase
MNTDEVLGIFREAGAVLEGHFILTSGLRSPVFLQKARVFMHADKTERLCKALAEKIRAAVPGRIDYVVGPAIGGLIPAYETSRHLGAPAIWVEREGGEFRLRRFEIARGSRVVIVEDIVTTGLSIRETVDCLRALGAEVVAAACIIDRSAGKTDVGVPLIALAEYEVPAYPADRLPPELAAIPAIKPGSRNI
>CP034443.1|AZO01461.1|3922772_3923153_+|VOC-family-protein
MIAGIDHFVLTVRSVDDTCSFYQRVLGLKRLDEPGRPTALLFGTQKINLHEIGRTFEPKAKAPTPGSGDFCLVAARPLSEICASLRANGVAIEVGPVERIGARGPMTSVYFRDPDGNLVEVSDYGR

Crispr_ID: CP034443_4

• CRISPR_ID: CP034443_4
• CRISPR_location: 4744772-4744870
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP034443_4

Consensus_repeat	Method
TATCGCCAAGGGCTTCGCCCTGGGGAGGGTGTGA	CRISPRCasFinder

spacers of CP034443_4

>4.1|4744806|31|CP034443|CRISPRCasFinder
TGGAACGAACGCAAGAGTTCATGCACAACAC

CRISPR arrays and Neighbor proteins around CP034443_4

CRISPR arrays

The CRISPR arrays of CP034443_4

>merge|CP034443|4|4744772-4744870|CRISPRCasFinder
TATCGCCAAGGGCTTCGCCCTGGGGAGGGTGTGATGGAACGAACGCAAGAGTTCATGCACAACACTATCGCCAAGGGCTTTGCCCTGGGGAGGGTGTGA

>CP034443|4|4|4744772-4744870|CRISPRCasFinder
TATCGCCAAGGGCTTCGCCCTGGGGAGGGTGTGA	TGGAACGAACGCAAGAGTTCATGCACAACAC
TATCGCCAAGGGCTTTGCCCTGGGGAGGGTGTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP034443.1|AZN99740.1|4749185_4749671_-|BA14K-family-protein	unknown	unknown	gnl|CDD|369573
CP034443.1|AZN99734.1|4740847_4741930_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226359
CP034443.1|AZO01516.1|4732674_4734093_+|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl|CDD|225190
CP034443.1|AZN99733.1|4739278_4740808_+|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|237027
CP034443.1|AZN99741.1|4750098_4751289_-|IS481-family-transposase	unknown	unknown	gnl|CDD|366234
CP034443.1|AZO01517.1|4738384_4739152_+|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl|CDD|224268
CP034443.1|AZN99729.1|4734228_4735170_+|hypothetical-protein	unknown	unknown	gnl|CDD|225189
CP034443.1|AZN99745.1|4754383_4755349_-|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl|CDD|234849
CP034443.1|AZN99736.1|4743016_4743883_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
CP034443.1|AZN99731.1|4736057_4736789_+|peptidase	unknown	unknown	gnl|CDD|226015
CP034443.1|AZN99738.1|4745230_4746955_+|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567
CP034443.1|AZN99744.1|4753100_4754387_-|dihydroorotase	unknown	unknown	gnl|CDD|181631
CP034443.1|AZN99746.1|4755507_4757136_+|DNA-alkylation-response-protein	unknown	unknown	gnl|CDD|173843
CP034443.1|AZN99739.1|4747056_4748550_+|glycerol-kinase	unknown	unknown	gnl|CDD|198361
CP034443.1|AZN99730.1|4735231_4736026_+|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224
CP034443.1|AZN99735.1|4741943_4743014_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226359
CP034443.1|AZN99743.1|4752493_4753081_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl|CDD|234691
CP034443.1|AZN99742.1|4751342_4752497_-|DNA-protecting-protein-DprA	unknown	unknown	gnl|CDD|223829
CP034443.1|AZN99732.1|4736844_4738257_+|aspartate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|215475
CP034443.1|AZN99737.1|4744872_4745154_+|hypothetical-protein	unknown	unknown	gnl|CDD|227764

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP034443.1|AZN99740.1|4749185_4749671_-|BA14K-family-protein	gnl|CDD|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	1.34896e-09
CP034443.1|AZN99734.1|4740847_4741930_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	9.74967e-126
CP034443.1|AZO01516.1|4732674_4734093_+|circularly-permuted-type-2-ATP-grasp-protein	gnl|CDD|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
CP034443.1|AZN99733.1|4739278_4740808_+|glycerol-3-phosphate-dehydrogenase	gnl|CDD|237027	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed.	0
CP034443.1|AZN99741.1|4750098_4751289_-|IS481-family-transposase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.19783e-18
CP034443.1|AZO01517.1|4738384_4739152_+|DeoR/GlpR-transcriptional-regulator	gnl|CDD|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	4.64469e-93
CP034443.1|AZN99729.1|4734228_4735170_+|hypothetical-protein	gnl|CDD|225189	COG2307, COG2307, Uncharacterized protein conserved in bacteria [Function unknown].	8.75294e-130
CP034443.1|AZN99745.1|4754383_4755349_-|aspartate-carbamoyltransferase-catalytic-subunit	gnl|CDD|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	0
CP034443.1|AZN99736.1|4743016_4743883_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.47021e-68
CP034443.1|AZN99731.1|4736057_4736789_+|peptidase	gnl|CDD|226015	COG3484, COG3484, Predicted proteasome-type protease [Posttranslational modification, protein turnover, chaperones].	6.30326e-146
CP034443.1|AZN99738.1|4745230_4746955_+|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.97403e-27
CP034443.1|AZN99744.1|4753100_4754387_-|dihydroorotase	gnl|CDD|181631	PRK09059, PRK09059, dihydroorotase; Validated.	0
CP034443.1|AZN99746.1|4755507_4757136_+|DNA-alkylation-response-protein	gnl|CDD|173843	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.	0
CP034443.1|AZN99739.1|4747056_4748550_+|glycerol-kinase	gnl|CDD|198361	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0
CP034443.1|AZN99730.1|4735231_4736026_+|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	6.3399e-48
CP034443.1|AZN99735.1|4741943_4743014_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	7.54519e-129
CP034443.1|AZN99743.1|4752493_4753081_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl|CDD|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	2.5437e-75
CP034443.1|AZN99742.1|4751342_4752497_-|DNA-protecting-protein-DprA	gnl|CDD|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	1.93561e-130
CP034443.1|AZN99732.1|4736844_4738257_+|aspartate-aminotransferase-family-protein	gnl|CDD|215475	PLN02880, PLN02880, tyrosine decarboxylase.	1.78323e-123
CP034443.1|AZN99737.1|4744872_4745154_+|hypothetical-protein	gnl|CDD|227764	COG5477, COG5477, Predicted small integral membrane protein [Function unknown].	8.49715e-42

Protein sequences

>CP034443.1|AZN99736.1|4743016_4743883_+|sugar-ABC-transporter-permease
MDRTWNNKAWFMVLPVLLLVAFSAVIPLMTVVNYSVQDTFGNNVFFWAGSEWFEEILHSDRFWEAMGRNLVFSAIILIIEVPLGIFIALNMPKRGWGVPVCLVLMALPLLIPWNVVGTIWQVFGRVDIGLLGYSLRSLGFNYNYVNDPFDAWVTVIIMDVWHWTSLVVLLCYAGLVSIPDAYYQAAKIDGASRWAIFRYIQLPKMNRVLLIAVLLRFMDSFMIYTEPFVVTGGGPGNTTTFLSIDLVKLAIGEFNLGEAAAMSIVYFLIIMLLSWVFYTVMTAYDAEK
>CP034443.1|AZN99735.1|4741943_4743014_+|ABC-transporter-ATP-binding-protein
MARIDCNHIRHAYGPHPKSDKDYALKEVHHAFEDGGAYALLGPSGCGKTTLLNIISGLLYPSHGELLFDGKDVTNLSTQERNIAQVFQFPVIYDTMTVYDNLAFPLRNRGVAEPDVDRKVRETLEMTGLADMAKKKARGLTADQKQKISLGRGLVRSDVNAILFDEPLTVIDPHMKWVLRSQLKQLHRRFGFTMVYVTHDQTEALTFAENVVVMYEGEIVQIGSPAELFERPKHTFVGYFIGSPGMNVMPVAVEGRSARLGSQTIELPGVPKAGTAGAIELGIRPEYVRLGASGMPVSIRKVEDIGRHKVVRASFEGRDIAVIVGEDEDIPADPKIAFDPAGINLYADSWRVEMGG
>CP034443.1|AZN99734.1|4740847_4741930_+|ABC-transporter-ATP-binding-protein
MLELRNVTKTVGAAEHIRDVSLTLQHGSLNVLLGPTLAGKTSLMRLMAGLDVPTSGSVWFDGKDVTGVPVQKRNVAMVYQQFINYPAMTVYENIASPLRVAGTERAKIDKEVRNAAALLKLTPYLDRTPLSLSGGQQQRTALARAIVKNAGLVLLDEPLANLDYKLREELRAELPRIFAATGTIFVYATTEPHEALLLGGNTATLSEGCITQFGPTIDVFRRPNDLVTAKTFADPPLNTIVLKKSGSSFLLDGGVSLPVPAELAGIADTSYTIGFQPHHLSFARPSPSAVPVRAKVSVTEITGSESFVHLDFADVRWVMLEHGILAFEPDQTIEVFIDPRHIMVFDANGRSAAPPQTLAA
>CP034443.1|AZN99733.1|4739278_4740808_+|glycerol-3-phosphate-dehydrogenase
MGASSPIHDIFVIGGGINGCGIARDAVGRGFSVFLAEMNDLASGTSSGSTKLIHGGLRYLEFYEFRLVREALMEREVLWKNAPHIIWPMRFVLPYAKGLRPAWLIRLGLFLYDHIGGRKLLPATKTLDMARDPAGKPLKPLFRKAFEYSDGWVNDARLVALNARDAADRGATIRTRTKVIGARREGELWKVRLEDVQTGDTEEVKARLLVNAAGPWVDQVLSSTVGLNDVHNVRLVQGSHIVIGKKFDDPRAYFFQNKDGRIIFAIPYEEEFTLIGTTDQDYPGDPQDVKISDAEIDYLCAAASEYFAQPVKRSDIVWTYSAVRPLYDDGASKAQEATRDYVLKTDGGEGTAPIVNAFGGKITTYRRLAESMLEKIEGFLGKRGKPWTANAPLPGGDFPANGFDAEVAKLKTAYPFLDARLARRLTRLYGTRARMLLGLARSNADLGRNFGADLYEVEVRYLVQNEWATTAEDVLWRRTKRGLHLGREQAAALDEFMRGISRRHVAAAE
>CP034443.1|AZO01517.1|4738384_4739152_+|DeoR/GlpR-transcriptional-regulator
MYLSPRHSEIIQIAKDHGRVLVDDLATHFNVTPQTIRKDLNDLCDQRLLSRIHGGALFPSGIENMEYEARRKIAAEEKEAIGRAAARLIPDNASLFINIGTTTESVSKALLDHAGLMVITNNINVANRMRIYPSIEVVIAGGVVRGSDGGVVGEAAVDFIRQFKVDYAVIGASAIDHDGALLDFDFREVKVAQAIIANARHVILVSDQTKFERTAPVRIGHLSQVNTFITDRCGIPSVRKICQEAEVQLIETSLS
>CP034443.1|AZN99732.1|4736844_4738257_+|aspartate-aminotransferase-family-protein
MNSNEFREWSLYAAEWGADYRGTIRERPVRPLVEPGEIFKSIEASPPEDGETMQAIFADFEQKILPGMTHWQHPRFFAYFPANAAPVSVVAEYLVSAMAAQCMLWQTSPAATELETRVVDWMRQALGLPEGFSGVMQDSASSATLAAVLTMRERALNWQGNRKGLQGQPVLRVYSSDQVHTSIDRAIWVSGIGEDNLVRIPAVGRFHAMDVTALEAAIAADREAGMLPAGIIACVGGTSIGGTDDIAGVAAVAKRYGLYLHVDAAWAGSAMICPEYRHFWGGVEQADSIVFNPHKWLGAQFDCSMQFIRRPEDLVRTLAIKPDYLKTHGRDGIINYSEWSVPLGRRFRALKLWFLLRAYGLENLRAMIRNHVAWSEGLAARLAREPDFEIVTEPMLSLFSFRHLAAAGIDSGEHNQRLVNAINDDGRIYLTQTRVDGQVAIRFQVGQFETTEADVDTAFGVVTEIARGLA
>CP034443.1|AZN99731.1|4736057_4736789_+|peptidase
MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEEPGERVIVLMSAGNLATTQAVVSLLDERTKAIGDRHATLLETPSMYQTVRMVGDTVKEVIASSSPTGDKADSYFNASFILGGQIKGSAPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIIIRAYEKTMSFAETVKLLLVSFDSTLKSNLSVGLPLDLLFYEKDAFKVSLKKRIAQDDQYYRTISDGWSSALKAAFASLPDFPE
>CP034443.1|AZN99730.1|4735231_4736026_+|transglutaminase-family-protein
MRLKITHRTEYRYDAPVHYLLQRLRLLPVSGSTQTVLSWALTIEGAREEVRFTDHFGNDTRLLSVEGERDFITVQASGEVVTRDTAGISGPHQGFAPLWLFGHETPLTTIGSGIRELAASVSKGTDIERLHRLMAVIGERVAYTPGTTNAATPAEDALALKTGVCQDHSHIFVAAARAMGFPARYVSGYLMMDASVEQAASHAWAEAHVAGLGWVAFDVANGISPDERYVRVATGRDYRDATPVSGIRLGQAEEQLAVTVTVEQ
>CP034443.1|AZN99729.1|4734228_4735170_+|hypothetical-protein
MLLGRTANGLYWMNRYIERAENMARLVDAGLRMALTRTQNASEEWNSVLLSAGSDAAFTQKYQDYTAANVADFLLRDTSNPSSTMASIETARNNARMVRTALTRETWESINEAWMALKRMLARPIDERDLPSVLDAIKRETALIRGSFYGTMLRNEIFDFSQLGTYVERADNTARILDVKYYVLLPSISWVGSTLDNYQWESILRSVSAHRSYRWVYEADYKPSNIADYLILNVRMPRSLTFCYRFLTEHLRFLGDDYGERHACHVTAGRTQAMLTAGSIKDIFDAGLHEFLANFIRDNTRLGDEIAQDYRFY
>CP034443.1|AZO01516.1|4732674_4734093_+|circularly-permuted-type-2-ATP-grasp-protein
MRLAAFDEMLPEVSGLRSPYSAYDRWLKEQDPARLSEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRIISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPKELIARNEAFLPEMIGMRPPAGVYTHIIGVDIVRISENEFYVLEDNARTPSGVSYMLENRETMMQLFPELFQQIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHAFLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGVPGIMDVYRAGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVVKEVHGSGGYGMLVGPAATKKECQDFSKRLAAKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
>CP034443.1|AZN99737.1|4744872_4745154_+|hypothetical-protein
MNLTWMAWTLPTALFFITILMLLCGMAVWEYVSPGGNPRVGVLRFETTRGDRLFLSLLGSAFIHLAWLGLVGPNLWWALALSVVYAIGVFRYV
>CP034443.1|AZN99738.1|4745230_4746955_+|carbohydrate-ABC-transporter-substrate-binding-protein
MRQQFLTSTTALVLLLGAGNAYAGMDEAKAFLDSEIGDMSTLDRAAQEAEMQWFIDAAKPFAGMDIKVVSETITTHEYESKTLAKAFADITGIKITHDLIGEGDVVEKLQTQMQSGENIYDAYVNDSDLIGTHWRYQQARSLTDWMANEGKDVTNPNLDLADFIGTKFTTAPDGDLYQLPDQQFANLYWFRYDWFNDEKNKADFKAKYGYDLGVPVNWSAYEDIAEFFTGREIDGKKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIKVDEKSRPVGSCVARGGDTNGPAAVYSIQKYLDWMKAYAPAAAQGMTFSESGPVPAQGEIAQQMFMYTAFTADMVKDGLPVVNEDGTPKWRFAPSPHGVYWKDGMKLGYQDVGSWTLLKSTPDDRAKAAWLYAQFVTSKTVDVKKSHVGLTLIRESTIQHKSFTDRAPKLGGLIEFYRSPARVQWSPTGTNVPDYPKLAQLWWQAIGDASSGAKTPQEAMDSLCAEQEKVLERLERAGVQGDIGPKMAEEKTLEEWNADAVAKGNLAPQLKIEPEKDKAQTINYDELVKSWSN
>CP034443.1|AZN99739.1|4747056_4748550_+|glycerol-kinase
MSSFILAIDQGTTSSRALLFDREMKVVGSGQKEFTQHYPASGWVEHDPEEIWSSVVATVKAALKAAGRHASDVAAIGITNQRETVVIWDKATGKPIHNAIVWQDRRTVPLCQKLKKQGLEKKFTRKTGLLLDPYFSGTKIAWMLDKVKGARKRAEKGELLAGTIDSFLIWRLTGGKVHATDATNASRTLVYNIEKNAWDDELLAILNIPARMLPQVKDCADDYGITEKNLFGSEIRILGVAGDQHAATIGQACFEPGMMKSTYGTGCFALLNTGSDLVRSKNRLLTTIAYRLNGKTTYALEGSIFIAGAAVQWLRDGIKVIGKAEQSGVLAASADPTQDVYLVPAFVGLGAPHWDAEARGAIFGLTRNSGSAEFARAALESVAFQTRDLLDAMRKDWKGASAKTVLRVDGGMVASDWTMQRLADILDAPVDRPTILETTALGAAWLAGSKAGVWPKARDFAKSWALERRFKPDMNASVRSAKLAGWRDAVRRTLSVQ
>CP034443.1|AZN99740.1|4749185_4749671_-|BA14K-family-protein
MNRIMSGLLATALSASFAVAEIVPVNAQPTYVPLGQNVSSDVQTVDHRRWRRSFNRDRDFSRRDFYRRDFSRNDGMYWRGHRGYRHYRRGYRRHGDYWFPLAAFATGALITGAIINNQNRRVYRGGSHEEWCYNRYRSYRAYDNTYQPYNGPRRQCYSPYG
>CP034443.1|AZN99741.1|4750098_4751289_-|IS481-family-transposase
MPWRECSVMEERLRFVARLLDGEGMSDVCREFGISRKTGYKIFNRYRREGVEALCDRSRRPVRYANQLPEPIERLIVDCKRDKPHWGARKIRELLVRRLAGDVRIPAKSTVHAVLDRHGLVSQPHKRNRANKAMGTTLSQAVRPNDLWCADFKGEFRLGNRQYCYPLTVTDQASRYLLACEALESTKEAPVIEAFVRLFKERGLPVAIRSDNGVPFASPNGLYNLSRLSVWWLRLGIAIERIKPGRPQQNGRHERMHLTLKKEATRPPGMNALQQQAAFDDFMSEFNAERPHEALAMKTPAELYTPSSRPYGGLPDLTYPFHDKDIIVTTCGRICMMRKKINISHVLAGKRLGIKEVDDGIWLVSFMHYDLGYIDLEQRTLQTIDNPFGTRLSPMS
>CP034443.1|AZN99742.1|4751342_4752497_-|DNA-protecting-protein-DprA
MSQRAAGPRLSDRQRLSWLRLIRTPNVGPATFRDLINRFGSAETALEMLPELMISGGARKIARIPSIAEAEAELETARRAGARFVGIGEADYPSLMKSMDHPPPLLAVKGEGAVFRLPAVAIVGARNASLAGIKMARTLAAELGRDGYGIVSGLARGIDTAAHQGSLATGTIGVLAGGLDLPYPPENAGLCDEIAEHGGAVISEMPFGWQPRAQDFPRRNRLVAGAALGLVVVEAAQRSGSLISARLAGEMGRLVFAVPGSPLDPRAAGTNALLKDGATLVTEASDISSAIAPLVGAPAPRTPPLGEPPDFSATPPPGEDDRARVVEALGPTPVAIDEIIRHTGLHPAQVFMVLLELDLAGRLERHAGGNVSLVFGNLTDPRHR
>CP034443.1|AZN99743.1|4752493_4753081_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MAYGIILALVFGYLLGSIPFGLLITRAAGLGDVRNIGSGNIGATNVLRTGNKGLAAATLLLDALKGTAAVLIAGRFAPELGPWAGLGAFLGHLFPVWLGFKGGKGVATYIGVLIALAWQVALVFAVVWLAVAFLFRYSSLAALTAAVVVPIALYVLSTPQIAGLFALMSLIVIIKHRANIARLLAGTEGKIGAKG
>CP034443.1|AZN99744.1|4753100_4754387_-|dihydroorotase
MSTTVFERARIIDPSRGIDEVGAVIVEGRKIVAAGKAALNQGAPEGAMIIDGAGKAVIPGLIDARVFIGEPGGEHRETIASASVAAAAGGVTSIVMMPDTDPVIDNVALVEFVLRTAKDTAIVNIFPAAAITKGLDGREMTEFGLLREAGAVAFTDGRHTISSALVMRRALTYARDFGGVIAHETQDADLASSGVMNEGLYASWLGLAGIPREAESIPLERDLALARLTGGAYHAAKISTAMAANAVTRAKADGANVTSGVSIHNLSLNENDVGEYRTFFRLTPPLRAEEDRLAVIEAVKDGTIDIIVSSHDPQDVDTKRLPFADAAAGAIGLETLLGAALRLYHNGDVTLLRLVETLSTAPARLFGLPGGTLKPGAAADLALVDLDEPWIVSESGIRSRSKNTCFEGARLQGKVLQTMVAGRTVFSA
>CP034443.1|AZN99745.1|4754383_4755349_-|aspartate-carbamoyltransferase-catalytic-subunit
MTDASSLPLYPHSHLLGIRDLSPADIELLLDKADQAVAISRQSEKKTSTLRGRTQINLFYEASTRTQSSFELAGKRLGADVMNMSVASSSVKKGETLIDTAMTLNAMRPDILIIRHQSAGAAALLAQKVGCSVINAGDGAHEHPTQALLDALTIRRAKGPLSKLIVAICGDILHSRVARSNIMLLNALGAQVRVVAPSTLLPAGIEKMGVIVSRSMAEGLKDADVVMMLRLQRERMEGAFVPSVREYFRYFGLDAEKLKAAKDDALVMHPGPMNRGVEIASEIADGPQSVIQEQVEMGVAVRMAVMEALLDPRRNHEGRGA
>CP034443.1|AZN99746.1|4755507_4757136_+|DNA-alkylation-response-protein
MTDDVTNQPPPLAGGNAWRGDPLLIQLAERFSDPVRKDLDGLGRFVLTQEAQELARLANVETSKLRTHDRQGRRIDLVEFHPAYHALMRRSVANGLHSSVWENGDAEIGRRHQVRAARFYLTAELETGHLCPITMTSASLAALMANPKLFREWAPRVTTRKYDQSQKPPVEKTGLTLGMGMTEKQGGTDVRANVTKAERVGSGFYRLTGHKWFMSAPMSDAFLVLGQVPEGLSCFLVPRILGDGSGNGFRFQRLKDKLGNRSNASSEVEFVNAIGEMVGEPGAGVKTIMDMVTLTRLDCAIASSAIMRAGLAEAVHHTRHRQVFGTNLVEQPLMQRVLADMALDVAAATALSFRLARSFDEAASDRGEAAFARAMTPVVKYWVCKIAPPLLYEAMECLGGNGYVEEAPLARYYREAPVNAIWEGSGNVMALDVLRVLGRAPSLFEEVLAGIDRDLGDGGRGTVGVLKAAMQVAATDEGSARLLTEQLALSAAAAELRRLGAGRIADAFVETRLAGQWRNTYGMLDSRHDARMIIDTLYPPTN

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	5118088 : 5126329	9	uncultured_Mediterranean_phage(85.71%)	tRNA	NA
DBSCAN-SWA_2	5688770 : 5697717	10	Pseudomonas_phage(33.33%)	tail	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>CP034443|5118088:5126329|DBSCAN-SWA
TTTATTCAAGATAGGTCGAAGGGTCGACCGGCGCCGAATTCTTGCGCACTTCGAAATGCAGTTTCGGCGAGTCGGTCGTGCCGCTCATGCCGGACTGCGCGATTTCCTCGCCGCGCTTGACCTTCTGGCCGCGCTGGACCTCGATCGAACGGGCGTGGCCATAGACTGTAACCAACCCGTTCTCGTGGCGCACCAGCACGGTATTGCCGAATTCCTTGAGGCCATCGCCGGCATAGATGACGACACCGTTCTCGGCCGCCTTGACCGCCGTTCCTTCCGGCACAGCGATGTCGACGCCATCCTTGCCGCCGCCAAAGCTGGAGATCACGCGGCCGCGCACCGGCCAGCGCATCTTGCCGATACCGGTGGCGTCAGGCGCCACCGCGTCGTCGTCCTCCGCCTGCTGGATGAGCTTCGTATCCTTCTTCGGCGGCGTGTAGGCGGCGAGTGTCTCCGACGGAGTGGTCTTCGCCGCGGGCTGGGTGGTGGCCGTCGTTACCGGATCGACCTTTGCCGGCTTGGCGCTGGCGACCGTCGCGGTTCCGCCGGTCGGCACCTTCAGGGTCTGGCCGATCTTGAGCAGACCGTCCTGCATGCCGTTCGCCTGCTTCAACGCAACCACGCCGACGCCGGTTTTCCTGGCGATGGCCGTCAGCGTATCGCCCTGCTGGACCGTGTAGGTGCCACCGGCGCCAGCCGGTTTGGGGGCTTTTCCGTCCTTCGGCTGGCTTGCTGCGGCCGATGCATCCACCTGCGCGGCGGACTTGTCCTCCTTAGGCTTCGGCTGCTGCGGCAGCACGGCCACCATCTCCGGCGCCTTGGCCGGCAAATCATGCTTGGTGTCGTTGGCAGGCTTTGCGTCGGCAAGCTTCGGCGCCGGCTTCTTGCTCGAATAGGCATAGGCCGGGATGACGAGCTTCTGGCCGGCCTTCAACCCATTGGTGGCGCTCAGCCCATTGACCTTCATAAGGGCGTCGGCGGGTACGCCGTAGCGCCGCGACAGGCCGGAAATGGTCTCGCCGTCCTTGACGACGACCTCGGTGGCACGCGGTTCGCTGCCTGCCGTCGCCACACGCGGTGCGTCGGGCTGTGCATCCTTGAACGGCTTTGCCACTGTCCCGGTCGCGGTCCGGTCGACCTGGGAGGCAGGCGCCAGCGCGGGGGCCGGCTGCGCCTGGCTGACCGGCGGCAATTGCTGCGTCGTCACCGGTTCGAGGCTTGAGCGGGTGACTGACTGGGTATGGCTGCCGTCGAGCGGCGCGGCCGAAACCGGGGCGTCGCCGGGATAAGGCTGGGCGGCGTCCTGCTTGTCTATGATGGCGCGCTGGTTGTTGGTCGAGGAGGTAAAGACGTCATCGACGCTGTTGAACCGCGCGACCTGGGAACTGCATCCCGCGGCAGTACCCGCGACCATGAGGACGGCGAAGCCACGCGCCAGATTGCGTCCGTTTGCCTTCAAAACACTGAATTGCATCGCACTTACCCGCAGATACCCGGTACAAACTGACCGCGATTAAAGCGCGTTAATGTTACTGGTCGGTTAAACCGCTAGAATCAGACGCAAATTTTCTTAAAATATTTAAAGCTGGACTTGGACGGGTGAAGTTCCAGGTCAGGCCGAGTCGGAGGCGGAGGAGAAGCGACCAGACAGGGTCGGTTGCGGCATCACCTGACTATCGACATACCCCTAAAGCGCGTCGCGCTTGAAGGATCCATGCGACGCGCTTCAAGTTATTGTTCTTATGTATGTCGTTATCCCAAAGCGCTGCGTACTTTGGGCGACATGCATCAGATGACCGCGGCTACGCTGCGCAGGATCGGCTGCAGGCGAACGAGGCCAATGTCCTCGCGTTCGAAGCGGCTGCCGACCTTGGTCAGTTTGGCCAGCACCTGCTCGCCCTCCTCGGGCCCGATCGGTGCGATGACGATGCCGCCGCTCGACAATTGGTCGAGCAGGAAGCGCGGCAGGCTGTCGAAGGCCGCCCATGCGACGATGCGGTCGAACGGCGCTTCATTCGCCAGTCCGTTGGAGCCGTCCGCCTGGCGCACGATGACATTGCCGATGGCGAGCGCCTCGAAGCGCTGTTTGGCCTGCTCGACCAGCGTCTTGTAGCGATCGATGGTGACGACCCGCACGGCAAGCCGCGACATCACCGCTGCGGTGTAGCCGGACCCGGTGCCGATCTCGAGCACGCGGTTGCCCGGCTCGATGGCAAGCGCTGCGATCACCGCGGCTTGCAGATCGGCCCCCTCGATCGCCTCCCCGCATTCGATCGGCAGCATGCGATCCGTCCAGGCGATCGAATGGAACTGAGCGGCAAGAAAACCACGCCGCGGCGTCGCCTCGAAAGCTGCGATCAGCGCCTTCGGCACTGTGCCCCTGCCACGCAGGCGAAGCAGGAATGCGGCGAAGCCTTCGCGGTCGTCGACCGTTGGACTGTGGTTCAGGGCCATGCGAGCGCCTTGGTGAGTTGATCGCGGATTTCATGAGCGGTGAGATCGAGCTGCAGCGGCGTCACCGACACCAGCCGGTTGCGCATGGCATGGAGGTCGGTGCCATGTTTGCCCTCGACAGGTTCGCGGCCGAAGCGCAGCCAATAGTAGGGAAGCCCGCGGCCGTCGCGGCGCTCGTCGACCCAAAGGCTGTGGACGAGCTTGCCTTGCGAGGTGACCACCGTGCTGGCGATCTCTTCGGGAGGGCAATTCGGAAAATTGACGTTGAGCAGCACGCCGTCCGGCAGCGGCGTGGCGACAAGCTTCTTGAGCAGCGCCGGCGCCAGCGCCTCGGTGGTCTCGTAGGGAACGACGCGATCCTCGCCGACGTAGGAATAGGCCTGGCTGAAGGCGATCGAGCGGACGCCGAGCAGCGCGCCTTCCATGGCGCCGGCGACGGTGCCCGAATAGGTGACGTCGTCGGCGATGTTGGCGCCGGAATTGACGCCGGACAGGATCAGGTCGGGCGCCGCGGGCAGGATCTTCTTCACGCCCATGATGACGCAGTCGGTCGGCGTGCCGCGCACCGCAAAATGCTTTTCGCCGATCTTCCTCAAGCGCAGCGGCTCCGAGATCGACAGCGAATGCGCGTAGCCGGACTGGTCCTGTTCCGGCGCCACCACCCAGACGTCGTCCGACAGCGTGCGGGCGATGCGTTCGAGCGATGCAAGGCCCTCGGCATGGATGCCGTCATCATTGGTCAGGAGGATGCGCATTATTTCGATTCGATCTTTTCCAGACCGCCCATGTAAGGCCGAAGCGCTTCAGGAATGGTTACGCTGGCATCCTCATTCTGGTAGTTTTCGATGACGGCAATAAGAGCGCGGCCGACGGCGGTGCCGGAGCCGTTCAGCGTGTGGACGAAGCGGTTGCCCTTGCCATCCCTGTCCTTGTAGCGGGCGTCCATTCGCCGCGCCTGGAAATCGCCGCACACCGAACACGACGAAATCTCGCGATAGGCGTTCTGGCCCGGCAGCCAGACCTCGATATCGTAGGTCTTGCGCGCGCCAAAGCCCATGTCGCCGGCGCACAGCGTCATGGTTCGGAACGGCAGGCCGAGCCGCTTCAGCACTTCCTCGGCGCACTCGGTCATCCGCTCGTGCTCGGCCAGCGACGATTCCTGATCGGTGATCGACACCAGCTCGACCTTGTAGAACTGGTGCTGGCGCAGCATGCCGCGCGTGTCACGCCCTGCCGAGCCCGCCTCCGAGCGGAAGCACGGCGTCAGCGCCGTATAGCGCAGCGGCAGCTTTTCATGCGGCGTGATGTCCTCGCGCACGAGGTTTGTAAGCGGCACTTCGGCGGTCGGGATGAGGCCGAGCCTGCCGTCCCCATGCGGGGCAAAGAACAGGTCTTCCTCGAATTTCGGCAACTGATTTGTGCCGAAAAGAACCTCGTCCCGCACCATCAGCGGCGGCTGGATTTCCTCGTAGCCGTGCTCGGTCGTGTGCAGGTCCAGCATGAACTGGCCGAGTGCGCGTTCCATCCGCGCCAGTCCGCTCTTCAGCACCGTGAAGCGCGAGCCGGACAGCTTCGCCGCCCGCTCGAAATCCATCATGCCGAGCGCTTCGCCGATCTCGAAATGCTCCTTCACCCAGTTCGGGCGCGCCGGCACCTTGCCGACGATGCGCTTAACGACATTGTCGTGCTCGTCCTTGCCGACCGGCACATCGTCGAGCGGTAAATTGGGCAGCACGGCCAAGGCGTCGTTCAGCGCCTTGTCGAGTTCGCGTTCGCGCGCCTCGCCATTCTGGATGAAGGCCTTGATCTCGCCGACCTCGACCTTCAGCCTTTCGGCAAGGGCGGCGTCGCCCGAACGCATGGCGTTGCCGATCTCTTTCGACGCGGCGTTGCGGCGCTCCTGCCTGGTCTGCAGCTCGGTCAGATGTTCACGCCGCGCCTCGTCCCTGGCGATCAGATCATCGACTGTAGACTGCGCGTCAGCACCGGACCACGAGCGCTTCTTGAGCGCCTCGACAAGGGCCTTCGGGTTGTCGCGAATCCATTTGATGTCAAGCATGGTCTTGAACGCTCCTGAGCTAGGCCAGAGGGCGTAAACCGCATCCTTGATCGATGCAAGACGTCAGCGTCGAGTTCCTTCACGCCCCCCTCTGTCCCGCGGATCTTGAAAAGATGAGAGCGCTACTCGCCCACGACGGAACCTACGTCGACGACGCGTCCGCTGCCTTTTCGGCCGCCGCTTCCGCAGCCTCCCGCTTCTCGCGCGCCAGGCGGTCCCGCTCCTGGTTGCGCTCGATCAGCCGGGCCGACCAGATCGAGACCTCGTAGAGAAGGATCGTGGGAATGGCCAGGCCGATCTGGCTTATCGGGTCGGGCGGTGTCAGCACAGCCGCCACGACGAAGGCGATGACGATGGCCCATTTGCGCTTTTCGACCAGCGCCTCGGATGACAGCATGCCCACCCGGGCCATCAGGCTGGTCACCACCGGCAGTTGGAACACCAAGCCGAAGGAGAAGATCAGCGTCATGATCAGGCTGAGATATTCCGAGACTTTCGGCAGCAGCGAAATCTGCACCTGGTCGTCGGTGCCGGCCTGCTGCATGGCGAGGAAGAACCACATCACCATCGGCGTGAAAAAGAAATAGACCAGCGACGCGCCCATCAGAAACAGGATCGGCGAAGCGATCAGGAACGGCAGGAAAGCGTTGCGTTCGTTCTTGTAGAGGCCGGGCGCGATGAATTTGTAGATCTGCGTGGCGATGAGCGGAAAGGCGATCACCATGCCGCCGAACATCGCCAGCTTGACCTGGGTAAAGAAGAATTCCTGCGGCGCCGTGTAGATCAGCTCGACCTTGTGCGGGTCGAGCCCTGCCCATTGGGTCGCCCATTTGAACGGGATGACCAACAGGTTGAACAACTGCTTGGCGAAGAAGAAGCAGAACAGGAAGGCGATGAAGAAACCGCCGATCGACCACATCAGCCGCCGGCGCAACTCGATCAGATGCTCCATCAGCGGAGCCGCCGATTGTTCAATCTCGTCCTTTTCCGAAACGCTCACTTGGTGGCTCCCGCCGTCTTCTTGGCGGCTGCCGCCGGCTTCTTCACCGCTGCCAGTGCAGCCTTCGGCTCGGCCTTTTTGGCTGGGGTCTTTGTTACGGCAGGTTTTGCCGCTGCTGCCACTGGCTTCGCTGCGGCCTCGGAGGCCGGCATCGCTTTCGCTGGCGCAGCTTTTTTCTTCGCTGCCGAAGCCTTTTGCGATGCAGCCGGCGTCGCCGTCCCGACAGGCGACGTCACCACCGACTCATCGGTCATGGCCGGAAAGGTCGGCGCCGCCGGGATCGCTTCCGGCGCATCGACGCCCGGCAGCACCGTCGCGCCATTCTTTAGCTCGATATCCTGCGGCGCCGAAGCATCCGGCGCGACCGGGTCGACAGCCGGCTTCGGCTTCATCACCGCATCGACCCCGGAGCGCACGTCGGCTGCCGCCTGCTCGAACGGGTTGAGCTGTTTCCTGATCTCGGCGGCCGGGTTGAGGCTTCTGAGCGAATCGACCGACTTCTTGACGTCGTCAAGTTCGGCCTCTTTCAGCGCGTCGTTGAACTGCTTCTGGAAGTCGGCTGCCATGCCACGCATCTTTGCCGTCGTGCGGCCGAAAGTGCGCAGCATCTTGGGCAAATCCTTGGGCCCAACGACCACGATCATGACGATCGCGATCACCAGCATCTCGGTCCAGCCGATGTCGAACATGGCGATACGTTCCGACTAAAGTTTTGGCCGACTAAAGTTTTGGGCTCAGCTCTTGCTGGCCTTTTCCTTCACTGCCGAAACGGTCTCGTCGGCACGGTGCTCGACGGTGCGCTTGTCCTCGGCGACATCGTCGTCGGCCATGCCCTTCTTGAAGCTCTTGATACCCTTGGCCATGTCACCCATCAACTCGGGAATCTTGCCGCGGCCGAACACCAGCAGCACGATCACCAGCACGATCATCCAGTGCCAAATCGAAAACGAACCCATAGCAACTCTCTCTCGAAATGTTTTCTCTGACGATGATCTATGCGTTTTCGCGCTGGGATTCAAACACAACCGCGACAGAGTTTATGAATGAGTGGCCGAAGTCACGCACTTTCGTTGCGAGAGAGGCGCTACGAATCCGCGCAGCCCCCGCCTGCCGGCCGTTTCGACAGCACACCTGCGGTCAATCTTCCTCGACGCGCGGCGTCAACAGGCCGAGTTCCTCGAGGTCGATGTCGGTCAGCGGATCCTCGTCGTCGGTCAGCGCGTCTGGATCGGCCGGCGGCAGCGGAATGGAAAAATTCGACGGCATGCGGCCCGAAAGCAGCCCGGCGCCCTTCAATTCCTCCATGCCGGGAAGATCGCGGATCTCCTCCAGCGCGAAATGGTCGAGGAAGATGTCGGTGGTGCCGTAGGTGACGGGACGGCCGGGCGTGCGGCGCCGGCCGCGCATCCTCACCCATTCGGTCTCCATCAGCGTGTCCAGCGTGCCCTTCGAGGTTTCGACGCCGCGGATATCCTCGATTTCGGCGCGCGTCACCGGCTGGTGATAGGCGATGATCGCCAGCACTTCGAGCGCCGCGCGGGAGAGCTTCCTCTGCTGCACCGTGTCGCGGCTCATCAGGAAAGCGAGGTCGCCGGCGGTGCGGAACGCCCAGGCATCGCCGACGCGCACCAGATTGACCCCGCGCCGCTCATAAATCTGCTGCAGTTCAGCCATCGCCGCTGCAATGCTGATGCCGTCGGGCAGGCGCGCGGCAAGCTGCTTTTCGCTGACCGGCTCGGCGCTGGCGAAAACGATCGCCTCGGCCATGCGCACGGCTTCCGCCATATGCAGCCGCTCGCCAGGATTCTGGCCAGGAGTCTGGAATGGATTCTGGGCCTGATTTTCTGCCGGAGTCCCGGCGAGCACGCCCTCTTCGGCCTCGTCGTCGACCTTGAACGGAATGACCGAAGCGTTGGCGCGTTCACTCATGATGCCACCTCGACTGCCCTGATGCCTTGCGCACGACCGCGCAGATAGAGCGGCGCGAACACCTCGTCCTGCCGCATTTCCACCTTGCCTTCGCGGACCAGCTCCAGCGTTGCCGCAAAGGAGCTGGCGATCGCTGTGCGCCGCTCTTCCGGATCGGTCAGATACTCGATCAGGAAGCCATCCAGCGCCGTCCAGTCGGCAAGCGAGCCGATCAGCCTGGTCAGGACATCGCGCGCGTCCTTGAGCGACCACACACCGCGCCTGGCGATCGTCACATTGGTGATCGCCTGCTTCTGACGTTGCGCCGCATAGGCGGTCAGCAGATCGTAGAGCGAGGCCGAATAGGCGTTGCGTTTCTCGACGATGACCATCTCCGGCATGCCGCGTGCAAACACGTCGCGCCCGAGCCGGTTGCGGTTGACCAGCCGAGCCGCAGCGTCGCGCATGGCTTCCAGCCGCTTCAGCCGGAACTGCAGCACCGCCGCCAATTCCTCGCCGCTCTCGCCGTCGTCGCCGGGTTGCTTGGGGATCAAAAGCTTCGACTTGAGAAAGGCCAGCCACGCCGCCATCACCAGATAGTCGGCGGCGAGCTCCAGCCTGAGCGCCCTCACCTTCTCGATGAAGGCCAGATATTGCTCGGCCAGCGCCAGGATCGAGATGCGCGCCAGATCGACCTTCTGGTTGCGGGCAAGATGCAGCAAGAGGTCGAGCGGGCCTTCGAAACCGGCGACGTCGACGACCAGCGCGGGATCGCCGGTCAGCCGCGAATCGTCGTTCTCGGCGGCCCACAGACGGTCCAT

Protein sequences of DBSCAN-SWA_1

>CP034443|5118088:5126329|5120531_5121296_-|AZO00092.1|DBSCAN-SWA
MRILLTNDDGIHAEGLASLERIARTLSDDVWVVAPEQDQSGYAHSLSISEPLRLRKIGEKHFAVRGTPTDCVIMGVKKILPAAPDLILSGVNSGANIADDVTYSGTVAGAMEGALLGVRSIAFSQAYSYVGEDRVVPYETTEALAPALLKKLVATPLPDGVLLNVNFPNCPPEEIASTVVTSQGKLVHSLWVDERRDGRGLPYYWLRFGREPVEGKHGTDLHAMRNRLVSVTPLQLDLTAHEIRDQLTKALAWP
>CP034443|5118088:5126329|5124334_5124556_-|AZO00095.1|DBSCAN-SWA
MGSFSIWHWMIVLVIVLLVFGRGKIPELMGDMAKGIKSFKKGMADDDVAEDKRTVEHRADETVSAVKEKASKS
>CP034443|5118088:5126329|5119875_5120541_-|AZO00091.1|DBSCAN-SWA
MALNHSPTVDDREGFAAFLLRLRGRGTVPKALIAAFEATPRRGFLAAQFHSIAWTDRMLPIECGEAIEGADLQAAVIAALAIEPGNRVLEIGTGSGYTAAVMSRLAVRVVTIDRYKTLVEQAKQRFEALAIGNVIVRQADGSNGLANEAPFDRIVAWAAFDSLPRFLLDQLSSGGIVIAPIGPEEGEQVLAKLTKVGSRFEREDIGLVRLQPILRSVAAVI
>CP034443|5118088:5126329|5118088_5119561_-|AZO00090.1|DBSCAN-SWA
MQFSVLKANGRNLARGFAVLMVAGTAAGCSSQVARFNSVDDVFTSSTNNQRAIIDKQDAAQPYPGDAPVSAAPLDGSHTQSVTRSSLEPVTTQQLPPVSQAQPAPALAPASQVDRTATGTVAKPFKDAQPDAPRVATAGSEPRATEVVVKDGETISGLSRRYGVPADALMKVNGLSATNGLKAGQKLVIPAYAYSSKKPAPKLADAKPANDTKHDLPAKAPEMVAVLPQQPKPKEDKSAAQVDASAAASQPKDGKAPKPAGAGGTYTVQQGDTLTAIARKTGVGVVALKQANGMQDGLLKIGQTLKVPTGGTATVASAKPAKVDPVTTATTQPAAKTTPSETLAAYTPPKKDTKLIQQAEDDDAVAPDATGIGKMRWPVRGRVISSFGGGKDGVDIAVPEGTAVKAAENGVVIYAGDGLKEFGNTVLVRHENGLVTVYGHARSIEVQRGQKVKRGEEIAQSGMSGTTDSPKLHFEVRKNSAPVDPSTYLE
>CP034443|5118088:5126329|5125525_5126329_-|AZO01538.1|DBSCAN-SWA
MDRLWAAENDDSRLTGDPALVVDVAGFEGPLDLLLHLARNQKVDLARISILALAEQYLAFIEKVRALRLELAADYLVMAAWLAFLKSKLLIPKQPGDDGESGEELAAVLQFRLKRLEAMRDAAARLVNRNRLGRDVFARGMPEMVIVEKRNAYSASLYDLLTAYAAQRQKQAITNVTIARRGVWSLKDARDVLTRLIGSLADWTALDGFLIEYLTDPEERRTAIASSFAATLELVREGKVEMRQDEVFAPLYLRGRAQGIRAVEVAS
>CP034443|5118088:5126329|5121295_5122600_-|AZO00093.1|tRNA|DBSCAN-SWA
MLDIKWIRDNPKALVEALKKRSWSGADAQSTVDDLIARDEARREHLTELQTRQERRNAASKEIGNAMRSGDAALAERLKVEVGEIKAFIQNGEARERELDKALNDALAVLPNLPLDDVPVGKDEHDNVVKRIVGKVPARPNWVKEHFEIGEALGMMDFERAAKLSGSRFTVLKSGLARMERALGQFMLDLHTTEHGYEEIQPPLMVRDEVLFGTNQLPKFEEDLFFAPHGDGRLGLIPTAEVPLTNLVREDITPHEKLPLRYTALTPCFRSEAGSAGRDTRGMLRQHQFYKVELVSITDQESSLAEHERMTECAEEVLKRLGLPFRTMTLCAGDMGFGARKTYDIEVWLPGQNAYREISSCSVCGDFQARRMDARYKDRDGKGNRFVHTLNGSGTAVGRALIAVIENYQNEDASVTIPEALRPYMGGLEKIESK
>CP034443|5118088:5126329|5123596_5124289_-|AZO00094.1|DBSCAN-SWA
MFDIGWTEMLVIAIVMIVVVGPKDLPKMLRTFGRTTAKMRGMAADFQKQFNDALKEAELDDVKKSVDSLRSLNPAAEIRKQLNPFEQAAADVRSGVDAVMKPKPAVDPVAPDASAPQDIELKNGATVLPGVDAPEAIPAAPTFPAMTDESVVTSPVGTATPAASQKASAAKKKAAPAKAMPASEAAAKPVAAAAKPAVTKTPAKKAEPKAALAAVKKPAAAAKKTAGATK
>CP034443|5118088:5126329|5124737_5125529_-|AZO00096.1|DBSCAN-SWA
MSERANASVIPFKVDDEAEEGVLAGTPAENQAQNPFQTPGQNPGERLHMAEAVRMAEAIVFASAEPVSEKQLAARLPDGISIAAAMAELQQIYERRGVNLVRVGDAWAFRTAGDLAFLMSRDTVQQRKLSRAALEVLAIIAYHQPVTRAEIEDIRGVETSKGTLDTLMETEWVRMRGRRRTPGRPVTYGTTDIFLDHFALEEIRDLPGMEELKGAGLLSGRMPSNFSIPLPPADPDALTDDEDPLTDIDLEELGLLTPRVEED
>CP034443|5118088:5126329|5122742_5123552_-|AZO01537.1|DBSCAN-SWA
MEHLIELRRRLMWSIGGFFIAFLFCFFFAKQLFNLLVIPFKWATQWAGLDPHKVELIYTAPQEFFFTQVKLAMFGGMVIAFPLIATQIYKFIAPGLYKNERNAFLPFLIASPILFLMGASLVYFFFTPMVMWFFLAMQQAGTDDQVQISLLPKVSEYLSLIMTLIFSFGLVFQLPVVTSLMARVGMLSSEALVEKRKWAIVIAFVVAAVLTPPDPISQIGLAIPTILLYEVSIWSARLIERNQERDRLAREKREAAEAAAEKAADASST

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZO00090.1|5118088_5119561_-	LysM peptidoglycan-binding domain-containing protein	S6B1Q4	Bacillus_phage	3.9e-11	37.5
AZO00091.1|5119875_5120541_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	8.2e-17	39.1
AZO00092.1|5120531_5121296_-	5'/3'-nucleotidase SurE	NA	NA	NA	NA
AZO00093.1|5121295_5122600_-|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.2e-99	56.3
AZO01537.1|5122742_5123552_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	3.6e-51	48.8
AZO00094.1|5123596_5124289_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
AZO00095.1|5124334_5124556_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	5.1e-08	65.9
AZO00096.1|5124737_5125529_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.8e-40	45.6
AZO01538.1|5125525_5126329_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.4e-33	33.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>CP034443|5688770:5697717|DBSCAN-SWA
CCTAAGGCTCGGCGTCGAACACCGGCGTGAACGCCCGGATCGTGCAGGGCGTCGGGTTGACGTGGCGAATCCTCACCCTGCCCTGCCCTTCCCAACTGTCGTCGATCGGCACCTCGACATTGCCGGTGAAGAGATCAGCCCGGCCGTCGGGCGCGACGATGCCCGGCATGCGCACCTTCTCCCAGCGGCCGCGCAGGAAGGACTGCACTTCGAGCCCCGACGTGTCGGTCTCGAGCAGCGACATCATCACCTTGGCGACCTTCTTGCGGCGGCCGACGATCGAGCCGTCGCGGCCGCCGACATCGAGTTCCAGCGTATTGGCCTCGCAACGGTAGCCAAGCCCGACCTGCCATTTCGCTGCCGTTGCGCCGCTGGGCAGCGTCACCTGGCCGGAAGCCACGGGCAGATCGTGGTAGACCTTGCCGTCGGCCAGCACGTCGACGCTTTCGCCGTCGAGATGGTCGAGCCCGGAGACGACGTTGACGGCGGCGCCCGAATAGCTCAGGCCGCAATCGACCTGGAAGGCGTCGTCCAGCGCGCCGTATTCGAACGGCGCCGTCATGATCTCGATGGTGCGCTTCGTCACGCCGCCGATAGTCCGCTTGACGAACAGCCAGACGTCGTCGGCGCCGTTCTGGCCCGGCGTCACGATTGCGCTTTCAATGATCGGCCAGCCGGCGTCGGCGAAGCTGCCGCCGAGGCGATGGCGGTGCATGCCGCGCACATCCTGCGATGGCTGGTGCGTGTAGCCGCCGAGCTCGCCATTTTCGAGCGGGAACCACAGCACCGGATCGGGATCGGTCTGGAACGCCAGCTCGACGACGCCTTGCTTGGGGATGTGCTCGGAGATCTGGCCGATGTCGTCGGAGGTGAATTTGCTGGCCGAGGTCTGCACCAGCTCGGCGATCGACTTGCGGCTGCGGGTGACATAGAGGAACGATTGTCCGGCATCGACCGGGCGGATGCGGGCGCAGCCGAAGGTGCGCGAATTGCGGTTCTTGAACGACGACGGCGTCAGCGCCTCGTCGATGCCGGAGCCCGATAGCGCCCGGATGCCGCCCGAGGTGCCGATCAACAGCGCCCCGTCGGAATCGGCGATCCAGACGATGTCGTTGGCCTGCCCGCCGCCGGCCTGGACGAATTCCAGCGCGTCGTCGTCCTTCTCGCCCAGCGCGAAATTGTCGAAGTCGCCGGTCGCCGACGCATAGACCGAGAACTTCCGGCTGAAGGCCAGGCGCTCCTCGTAGAGCGAACCGCTTTCGACATACTTCCCGGGAGCGAATGTGCCGAGCCGCCAGCGGGTGATCGGGCTCAGATTCGGCAGGGCATGGCCGTAAAGGATGATCTTGACGACTGTCGCGCTGGTGCGGCTGGTGATCTTCGCCCAACGCCAGCGCCCGTCCGAACCCAGGAGCCGGATGGCGCGACCGACATCCGTTGTCTGGAACCCGGTGCCATCGTTGATGCCGTCGATCGAAGAGGCGGTCAAATCGAACGGCGTCTGGTCCGATGCGGCGACATGGAAAGCCAGTTCGGCAGCCACCGATTCCACGGCATCGCCGCCACCGCCGCCGGTGAAGATCAACTGGTGATATTCGAAGGCGGCCTTGTTGAAGAATTCATAGAAGCGGGTCTCCGAATTGCCCCAGCCGCTTTCCCCGGTCCTGCTGTCGAGCGTCACCCAGTTGGTGCCGTCGTTGGATCCCTGCACTTCCCATGCGGTGAAATAGTCGGCATCGCCGGTAACGTCATTGCCCGCGGTCAGCCAGTAGGCGTCGACGACACGTTGCGCGCCGCCCGCATTCCGGAAACGAATGTAGCCGGTCGAGCCACCGGCGAGGGTGATGGCCTGCACTTTGTCGCGGTCGAACATCTGATAGGCGCTGGCGGTGCCGCTTGCGGTCGATGCCGTTCCGCTCGGTGCCGTGTTGCTGGTCATCTGCGGCGTCAGATGGCCGGTATTGGCAGGCGTCAGCGTCGTGGCGGTGTCGTTGATGTCGTCATACGGCCCGTCCTCGAACTCGTAATCCTCCAGTGTCCATGTCGTGTGCGCCGTCCTGGTCAGCACCTTGAGCGGATAATCCTTGTGGCTGATCCACATCTGGTCGGCCGACTGGACATAGGCGAGGTCGAAGAGGTCGGCTTCCACGTAGGGCGAGGCGATCTCGACCGTGCCGACACGGGCGCCATAGGCGTAGACGCGGATATACTGATCGCCGAATTCCAGGCAGTAGGCCTGCTCGGAAGAGAAGATGAAAGGAATGCCGCGCGTTGTCTTGGCCGCGTTCTTCACCGCGCCGACGAAGATGGTGCCGCCGCGCTTCCTGATGCCGCCATGCGGCAGCGTGACGAAGTTCTCGCATTTGGAAAGCGCCGCCCGATAGAGATCGAGCGAGGCGCGCGCATGCAGGCGCGGCGAGATCTCGCCACGGGTGAAAACGTCCTGGACCGGATAGAGCGTCGTCATCAGCGCACGAACCGGTTGTCGCCGCGCTGGACCGCCCAGGACGACGTCGAGAGCCGGCCGCCGCGCTGGATGGCGTTGGCGCTGAACGCCGCGTCGAGCGCCCGGTCATAAGCACCGCGGGCGATGTCGATCATGCCTGTCTTGTGGGTCAGCGGATGCGCGATCTTGATGGCCAATGCAGCGACCAGCACCTCGCTGAACAGCGCGTCCCAGTCGTTCGGATCGGTCAGGTTGGCGATGTAGCGGATAAGGCGCGGACCCGGCTGGTCGCAATAGATCAGCCCGGCCTCCTGCCGCCACGAGATCGGAACGCCGTCCGGCTCGCCATTATGGGTCAGCGGCAATGGCCGCAGGCAGTCCACGGGCAATTCATAGACAAAGTTCAGCGTGCCCGCGCCGCTGCCGGTGTCGGCGCCGGCGACGGAGGCCGCCAGGATGGCAAATACCCAGGCGTGCTTCGTCAGCTCCGCCTCGCGCGTCAGGTCGAAATGCAAGTTGAGCAAGCGCGCGGCTTTCACATCCTGGTCAAGGCTGTCGATCGGCGCCTCGTCGAGGACGCCAAGCGCCATATTGGCGATGTCGAGCGGGGTGATGGCCATGGTTTTAAGCCTCCGTCAGTGTGATTGGAGCAAAGGTCATGGGTGAATCCGGGCATAAAAAAAGCCGCTCGGAGGCGGCTGGATTTCTGAGCGATTGGATCTGGATTTCTGAAAGCGATTGGATGTTGAGGTCGCGATCCGTCGCGCCCCCCTCTGTCCTGCCGGACATCTCCACCACTTGGGGGAGATTGGCAGCGTCCCTGGCGGCGTCTTTCTTCAAACATTGGAGATTGGCGAAAGCCGACGTGACAGCCGATCTCCCTCCTTGTGGGGAGATGTCCGGCAGGACAGAGGGGGGCGCGAAGGAATGCTGTCCGAACGGGATTGGCGATAGGGCGGAGGTTCGCCCCCTATTTCAGCCTGCTCAGGCCTCGGTCGTCTTCAGCGCGATGAACGTCATGTTCTTCACGCTCGACGCCGTGCGGTCCCAGTTCGCCGCCAGCGCAAGCTCGGCATCGGTGGCGAATTCGCCGGCCGAGGAGGCGTCGAGGAAGCGGGTGCCGGGCACATGCGGGACGAAATGCCGGCGGCCGACCATTTCGGTGACGCCGCCGCCATGGCCCTGGCGCGGCTTGCGGTCGAACTCCAGCGGCCCGCCTTCGGTGTTCACCGGAAGCTCGTTCCACAGGATCGCCTTGTCCTTGAACATGAACGCGGTGTACTCGCCGGCCGCCACCGGGATGTCGTCGTCGACGACGGCCCGCAGCCCCATGTAATAGGGGATCAGCGGCCCGCCCTGCTCAGACGGCGGCACATAGTCGATCAGGTTGGCGAGCTTCAGCGCCTTCATCTGCTTGGAGTGCATCCAGATCGTCTTGAACTTGTCGGCGCGGTCGCCCATCAGATAGGCGGCCTCGATGATGTCGGTGTCGACGATGGAGGCGCCGGTGGCGCGCACCAGATCGCCGCCGTCATTGGCGATGTTGTCGGCCAGCACCCCTTTCAGGATGCCGAGCAGCGTCAGCTTGTTGGCGCGCTGCCAGTAGTCGGTCTGGCGGCGCACGATCAGCTTCTGCGGGTCGTCGCCGGCCAGGATCGAGGTCAGGTCCGGAATGCCCCAGGCCTGGGCGCGGACATTGCGGGCTGCCACCTCGCGGCGCGAGCCGATCTTCTTCATCTCGATCGAGTCGGCCGGATCGTCATTGATCGGCTCGGACGGGTCGTTGCCGAGATCCTTCCAGCCGGGCATGTCGACGGAACGCCCGCCCATGGAGAGCTTCGAGGCGATGGACGGGTCGGAAAACAGGATTCCGGCCTGGTAGATCTCGAGCGACTGGACGTGCTCCTCGAACGAGTATTGCGCATAGACGGAGGGAACGATCGCGTCCGCGATACGGGTATAGGCGTCTGCCATTTTGGTCTTTCCTTCAGGGGTTGGTTAGCGGCTGATCTCTCAAAGGTCAGAGAGGATTATTCGGCATCCAGAGGTCTGGATTCTCGCCGGCCTCGCGTGCCAGCCGCCGGGCGCGGGCGGGATCGCTTTTGACGAGGGCGGAGATATCAGTCAGGTTGCGTTCGCCGGCGGCGTTGCGCTTGAAGGGATTGCCTCCACTCAAGGCCGCGCCGCCGTCGATCGTGTCTTCGCGGAACATCGCCTCGCCGATGGCGTGGAATGCCTTGGCGATCTGCGGATCGGTCAACGCCCCGTCATTGAGAAGGATGCCCTTCGCCTTGTAGGCATCGACCAGGCCGAGCTTCTTCATGGCCCGGTTGGCGACCTCCAGCCTCTGGCGGAAGCCGTCGCTGTCGGTCGGTCCCCAATCCCTGACGAGGTCATCGTGGGTCGCCTCGACCGAGCGGGCAAGGGCGATCTGCTGCGCCTTGGCCTGCTCGGCCATGTAGCCGACGAAGCGGTCGTGATAGGCCTGCGCCACCTTCGGCGTGGCGCCGGCTTCGACCGCCCAGGCCTTCGACGCATTGGCGAGCTCGTCCGAATAAGCGAAATCTTCGGGGAGCCCGTCGGGGCGCTTGTACTCGACCTTGTCGGGCGATGTGAGCGGACGCATCGCCTCGGGCAGCCGGGCATGGAACCTGTCCCAGTCTTCCCCAGTTGCGTCCGCCGAGGGAACGCGCAGGCTTTCACCCTGCTGCCGTTCCAGCTCCGCATAGGATGTGAAAACCCGATCGAGGCTTTCAGGCTCGGTCCAGCCCTTGGTTTCAGCGAGCTTGCGGTTGCCTTCGGAAAGACCGTCAAACCAGCTTTTCGCAGCCGGCGGGGCGGACCCGTTGTCCCCGTTGGCCGGTGGCCGTACTGGGTTGCCCGCCGGTGGCGACGCCACCACGGACCCGGCGTCTGCCAGATCTGTCATGAGAAAGATTCCTTTGTGTTGATTGCAGTAGAAATGAAGGCGCTGGTCCTTCTCCCCTTGTCGGAGAAGGCAAGGCGCTGGCGCCGCTCACAAGCCGGTATCACCTGAATATCAACCCGTCGCGGGCGGAACTTTGCGGCCGGAGCCAATCCAATTGACTTCCAGTTCGTTAGTGTGTATATATACACAACATGAAGAGCGCCGATGTCATTGATAGATTGTTGGCGGATGGCTGGCACGAAGTGGCTCGAAAAGGCAGTCATGCCCAATTCAAGCATAAGACCAAGCCGGGCCGCGTGACGGTTCCGCATCCCAGGCGAGACATCCCGATCGGCACGCTCAAGAGCATCGAAAAGCAATCCGGCCTGAAGCTGAGGTAGAGAAATGCGTCACTATATCGGACTGATCCACAAGGAAGCGGACAGCGACTTCGGCGTGTCCTTTCCCGATTTTCCGGGAGTGGTCACGGCCGGCGTTAACCTGGACGACGCCCGCGCCATGGCGGAGGAAGCACTGGCCTTTCATGTCGAGGGCCTGGTCGAGGATGGCGAAGCCATTCCCGAACCGTCCTCCCTGGAGGAAGTGATGTCCGACAAGGACAATCTGAGCGGTGTCGCCATCCTGGTTGCCTTGAAAACCGAAGCAACGAAGGTCGTGCGCGTCAACGTCACCATTCCGGAGGACGTCCTCAATCAAATCGACCACTATGCAGAACGCCACGGCTACAGCCGATCCGGATTTCTGACCGCCGCCGCGAAAAAGGTAATGCAGATCGAGGCGGCGTAGCGCTCCGCAGGTCCATTCAAGATGAGGCTCTACCGCCTTGTTTGACTATGATCTTTCCGAGCAAGGCCTCGGTCATCAAGACGAAAGAAACCATGTCTCATTTCGTGAGGTATGGTGCCCCTGTTCCGCCGCAATGCGCCCGCACTTGGCAAGGTATTCGGCCTTTTGGGCTTCAAAGGAGGACTTTTACATGATCAAGAAAGCCATTGCCGCCGCGCTTCTGACTGCCGTTCTGGCTGGGTGTGCGCAGACCGAAGGGCAGCAAAGAGCCACCACGGGCGCTTTGGTCGGCGGCGCGGGCGGCGCGCTCGTCGGTCAGGCGATCGGCGGCAACACCAAGAGCACGGTTATCGGCGCAGCCAGCGGTGCCCTTCTGGGTGCGGTCGTCGGCAGCGCGACCACACCGCAGCGGCGCGGCGAACAGCTTTGTCGCTACCAGGACCGCAACAGCGGCCGCATCTACACCGCGCCTTGCGACGACCGCTACTACAGCGGCGATTATTGAGCGTAGCGGGCTGCAAACGCGGCAAGGCTATGGGACAGCACCCCCCTCTGGCCTGCCGGCCATCTCCCCCTCAAGGGGGGAGATCAGCGGCTTCGCCGCAGCCGCCAATCTTGCAACGTTGACGATTGGCGAAAACGGTGACGGCATCCAATCTCCCCCCTTGCGGGGGAGATGGCCGGCAGGCCAGAGGAGGTGTTCAAGCGCCAGCCTGACTAGCCAGCCCTACCTCTCCTCCGCCCTCGCCGCCTTCTCCAGCGCCGCCAGTTGCGCCTCGTCCAGCGTCAGGAACCCCATAATGTGCTGCACCACTTCGGCCCGCGCATTGCTCAGCGCGCTGTGCAGTTCGAAGCCGTTCGGCGTTCTGGTCCTGGCCAGCCATTCGCCGTAGGAGGGGCGGCGGTAATAGCCGGTGGCGGCCGTCAGATCGGCCAGCACCATCTCGCCGTCCTGTCCAGAAAAGACCCTGAGATACGCCTTGGTCAGCGCGTCCTGCGCCTTGGCCGGGCCGCCGGCCTGGCTCGCATGGGCAAAGCGTTTCCGGCTCATGCGCCCTGCCCGCCCTGCACGCTTTCCGCACCCTGCGGCATCAGCCCGCCGAGCCCATCAAGCAAGCCGCTGTCGCGCGCCTGCACGGCCGCCGGCACGGCGTCCCTGGCGGCCTTGCCGGCGGTGGCGATCGCCGCCATGCCGGCCTGCGCCTGTTGCGCCTTGGCCCTGGCGTCTCGGATGCCCGCCACCTCTTGCCTGGCGCGAAAGATGCGCTGCGGGCTGCGGCCGGCGCTCTGCACGATCTTTAGCGCCTCGTCGCCGTCGATATTGTCCATGACGCCGGGGTCGAACTGCGCCATCTGCATGGCGGTGGTGACCACCTGGATGGTGTCGCGCGCCTCGGCCGAGCGGCGCAGCACGTCGAGTGGGCCGGTGAAGGTCGGTCGTACCGCCTTGCCGGCAAGGCTCGCCGGCGGCAGGAAACGGCTGTCTTCCTCGTACAATCCCTTGTCTTCCAGGATGCCCAGCTCGCGGTCGAGATTGCTGGCAAAACCGGCCTGGATGATCGAGCCGGACGGCCCGAGCAGCGCGCCCTTCTCCTCTTGCCGGATCAAGGCTTCGGTCGCCGTCATCTGCGGGTTCTGCACCAGCGTCTGGAACAGGTTGACGAACATCATGTCGCGGATCTCCTCGGCCCGGCTTTCCGCGTAGTTGAACGCGTAGGTCGGGTTCTGCCCCGTGGCGATCGGCGCGATCAGCGGCCGTCCCTGATCGTCGATCAGGCCGGGATAGTTCTCGCCGGGATTGAGCACCGGCACATAGTCGAGCCGCGCCTTCGACGCGGTCGCCGGATCGGTGATCTGCTGCAGCGCCCTGAGGCCCGAGCGGCGCACGGCGTTTTCCTCGCGCACCGTGGTCAGCGCCTCGATGGTCGGCGAGACGCCATAGGGGTCGCCCTCGTAGCGCCGCCAGTTGAAGCACGACACCGGGAAGGAGCGGAAGCCGCTTTCCCTAACGATCGCCTCCTCGTCCTCGATGACGTGATAGGAGGCGAACGCCGTGTCGAGATACTGGTAGGTGCCGCCCACCCGGTACATCTGGCGCTCATCGCGCGGCTGGATGCATTGGATCAGCGCGATCTTCGTCTCGCATTTCGAGGGGTCATCGACCAGCATCTTGATCCGCGCCGGCAGCTTGTCATAGCCGAGCAGCTGCGCCGCCTGCCGCGCCGTGCGCTCGTAGCGGCGGTGGAAGGTGTCGACCTGGCCCCAGCGGTTGCGCGACAGATAGCCCTCGGCCACGGGAATCGAGGCATAGCGGATCAGCGTGCCGCCAAAGCCCTCCTCGGCATAGAGATAGGCCGGGCCGTAGCGCACGACATTGCGCAGGCAGGCCTGCGTCGCCGGCACGAAATTCGAATTGGCGGAGTAACGCAGCGCAAACAGGAAATCGCGCAGCGCTTCCGCCCATTCCTTTTCCTCGTCGGTCTCCTCGTCGTTCATGGCCGCGGTCGACAGCCCGTGCCATTTTTCCGACTGCGGGATGATCAGGCTTTCCAGCCCTGCGGCGAGGCGATTGGCAGCCGAGTTGATGGTGTTGGCGTAGACACGGGCGCCGCGCCGCTCTTGCCGCTCGGCCTGCGAGGCCGCGCCGGCTTGCCGGCCCCAGATGTCGGGCGCGTCGGGATCGCAGAATTCCGACACGGCCTCCCAGACAGCCTCATACTGGCTGCGCTCGGTCTCCAGTTCGGCCTGTCGCGACAGGATATCGTGGGCACGGGAATCGTTCGTCAT

Protein sequences of DBSCAN-SWA_2

>CP034443|5688770:5697717|5695462_5695642_-|AZO01577.1|DBSCAN-SWA
MALEHLLWPAGHLPRKGGDWMPSPFSPIVNVARLAAAAKPLISPLEGEMAGRPEGGAVP
>CP034443|5688770:5697717|5695657_5695981_-|AZO00586.1|DBSCAN-SWA
MSRKRFAHASQAGGPAKAQDALTKAYLRVFSGQDGEMVLADLTAATGYYRRPSYGEWLARTRTPNGFELHSALSNARAEVVQHIMGFLTLDEAQLAALEKAARAEER
>CP034443|5688770:5697717|5695120_5695435_+|AZO00585.1|DBSCAN-SWA
MIKKAIAAALLTAVLAGCAQTEGQQRATTGALVGGAGGALVGQAIGGNTKSTVIGAASGALLGAVVGSATTPQRRGEQLCRYQDRNSGRIYTAPCDDRYYSGDY
>CP034443|5688770:5697717|5695977_5697717_-|AZO00587.1|tail|DBSCAN-SWA
MTNDSRAHDILSRQAELETERSQYEAVWEAVSEFCDPDAPDIWGRQAGAASQAERQERRGARVYANTINSAANRLAAGLESLIIPQSEKWHGLSTAAMNDEETDEEKEWAEALRDFLFALRYSANSNFVPATQACLRNVVRYGPAYLYAEEGFGGTLIRYASIPVAEGYLSRNRWGQVDTFHRRYERTARQAAQLLGYDKLPARIKMLVDDPSKCETKIALIQCIQPRDERQMYRVGGTYQYLDTAFASYHVIEDEEAIVRESGFRSFPVSCFNWRRYEGDPYGVSPTIEALTTVREENAVRRSGLRALQQITDPATASKARLDYVPVLNPGENYPGLIDDQGRPLIAPIATGQNPTYAFNYAESRAEEIRDMMFVNLFQTLVQNPQMTATEALIRQEEKGALLGPSGSIIQAGFASNLDRELGILEDKGLYEEDSRFLPPASLAGKAVRPTFTGPLDVLRRSAEARDTIQVVTTAMQMAQFDPGVMDNIDGDEALKIVQSAGRSPQRIFRARQEVAGIRDARAKAQQAQAGMAAIATAGKAARDAVPAAVQARDSGLLDGLGGLMPQGAESVQGGQGA
>CP034443|5688770:5697717|5692199_5693189_-|AZO00581.1|DBSCAN-SWA
MADAYTRIADAIVPSVYAQYSFEEHVQSLEIYQAGILFSDPSIASKLSMGGRSVDMPGWKDLGNDPSEPINDDPADSIEMKKIGSRREVAARNVRAQAWGIPDLTSILAGDDPQKLIVRRQTDYWQRANKLTLLGILKGVLADNIANDGGDLVRATGASIVDTDIIEAAYLMGDRADKFKTIWMHSKQMKALKLANLIDYVPPSEQGGPLIPYYMGLRAVVDDDIPVAAGEYTAFMFKDKAILWNELPVNTEGGPLEFDRKPRQGHGGGVTEMVGRRHFVPHVPGTRFLDASSAGEFATDAELALAANWDRTASSVKNMTFIALKTTEA
>CP034443|5688770:5697717|5694528_5694930_+|AZO00584.1|DBSCAN-SWA
MRHYIGLIHKEADSDFGVSFPDFPGVVTAGVNLDDARAMAEEALAFHVEGLVEDGEAIPEPSSLEEVMSDKDNLSGVAILVALKTEATKVVRVNVTIPEDVLNQIDHYAERHGYSRSGFLTAAAKKVMQIEAA
>CP034443|5688770:5697717|5691235_5691835_-|AZO00580.1|DBSCAN-SWA
MAITPLDIANMALGVLDEAPIDSLDQDVKAARLLNLHFDLTREAELTKHAWVFAILAASVAGADTGSGAGTLNFVYELPVDCLRPLPLTHNGEPDGVPISWRQEAGLIYCDQPGPRLIRYIANLTDPNDWDALFSEVLVAALAIKIAHPLTHKTGMIDIARGAYDRALDAAFSANAIQRGGRLSTSSWAVQRGDNRFVR
>CP034443|5688770:5697717|5693235_5694144_-|AZO00582.1|DBSCAN-SWA
MTDLADAGSVVASPPAGNPVRPPANGDNGSAPPAAKSWFDGLSEGNRKLAETKGWTEPESLDRVFTSYAELERQQGESLRVPSADATGEDWDRFHARLPEAMRPLTSPDKVEYKRPDGLPEDFAYSDELANASKAWAVEAGATPKVAQAYHDRFVGYMAEQAKAQQIALARSVEATHDDLVRDWGPTDSDGFRQRLEVANRAMKKLGLVDAYKAKGILLNDGALTDPQIAKAFHAIGEAMFREDTIDGGAALSGGNPFKRNAAGERNLTDISALVKSDPARARRLAREAGENPDLWMPNNPL
>CP034443|5688770:5697717|5694335_5694524_+|AZO00583.1|DBSCAN-SWA
MKSADVIDRLLADGWHEVARKGSHAQFKHKTKPGRVTVPHPRRDIPIGTLKSIEKQSGLKLR
>CP034443|5688770:5697717|5688770_5691236_-|AZO00579.1|DBSCAN-SWA
MTTLYPVQDVFTRGEISPRLHARASLDLYRAALSKCENFVTLPHGGIRKRGGTIFVGAVKNAAKTTRGIPFIFSSEQAYCLEFGDQYIRVYAYGARVGTVEIASPYVEADLFDLAYVQSADQMWISHKDYPLKVLTRTAHTTWTLEDYEFEDGPYDDINDTATTLTPANTGHLTPQMTSNTAPSGTASTASGTASAYQMFDRDKVQAITLAGGSTGYIRFRNAGGAQRVVDAYWLTAGNDVTGDADYFTAWEVQGSNDGTNWVTLDSRTGESGWGNSETRFYEFFNKAAFEYHQLIFTGGGGGDAVESVAAELAFHVAASDQTPFDLTASSIDGINDGTGFQTTDVGRAIRLLGSDGRWRWAKITSRTSATVVKIILYGHALPNLSPITRWRLGTFAPGKYVESGSLYEERLAFSRKFSVYASATGDFDNFALGEKDDDALEFVQAGGGQANDIVWIADSDGALLIGTSGGIRALSGSGIDEALTPSSFKNRNSRTFGCARIRPVDAGQSFLYVTRSRKSIAELVQTSASKFTSDDIGQISEHIPKQGVVELAFQTDPDPVLWFPLENGELGGYTHQPSQDVRGMHRHRLGGSFADAGWPIIESAIVTPGQNGADDVWLFVKRTIGGVTKRTIEIMTAPFEYGALDDAFQVDCGLSYSGAAVNVVSGLDHLDGESVDVLADGKVYHDLPVASGQVTLPSGATAAKWQVGLGYRCEANTLELDVGGRDGSIVGRRKKVAKVMMSLLETDTSGLEVQSFLRGRWEKVRMPGIVAPDGRADLFTGNVEVPIDDSWEGQGRVRIRHVNPTPCTIRAFTPVFDAEP

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZO00579.1|5688770_5691236_-	hypothetical protein	A0A0F7L7G6	uncultured_marine_virus	1.3e-83	28.2
AZO00580.1|5691235_5691835_-	hypothetical protein	A0A221SAM1	Ralstonia_phage	1.9e-12	31.2
AZO00581.1|5692199_5693189_-	Coat protein	A0A1I9L2E0	Xanthomonas_phage	6.5e-42	35.3
AZO00582.1|5693235_5694144_-	hypothetical protein	NA	NA	NA	NA
AZO00583.1|5694335_5694524_+	type II toxin-antitoxin system HicA family toxin	A0A0U4KLG1	Pseudomonas_phage	1.7e-15	66.7
AZO00584.1|5694528_5694930_+	type II toxin-antitoxin system HicB family antitoxin	A0A0U4ISP5	Pseudomonas_phage	1.2e-18	41.4
AZO00585.1|5695120_5695435_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AZO01577.1|5695462_5695642_-	lytic murein transglycosylase	NA	NA	NA	NA
AZO00586.1|5695657_5695981_-	hypothetical protein	NA	NA	NA	NA
AZO00587.1|5695977_5697717_-|tail	phage tail protein	A0A2I7RHC5	Vibrio_phage	5.4e-52	29.7