CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025200	Lactobacillus acidophilus strain YT1 chromosome, complete genome	2 crisprs	cas3,c2c9_V-U4,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,cas14k,DinG,cas14j,csa3	0	42	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025200_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025200_1

546310-547988

TypeI-E

I-B,III-A,III-B

Consensus_repeat	Method
GTTTTCTCCACGTATGTGGAGGTGATC	PILER-CR
GTTTTCTCCACGTATGTGGAGGTGATCCT	CRISPRCasFinder
GTTTTCTCCACGTATGTGGAGGTGATCC	CRT

27 spacers

cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh

The CRISPR arrays of CP025200_1

>merge|CP025200|1|546310-547988|PILER-CR,CRISPRCasFinder,CRT
GTTTTCTCCACGTATGTGGAGGTGATCCTGATGATGATAGTAATTTATCTGGACTAGTTAAGTTTTCTCCACGTATGTGGAGGTGATCCTGATTTTGCTGCAGGAATCGGCTTTGGCGGTGCGTTTTCTCCACGTATGTGGAGGTGATCCCAAATTTGTCAACGACTACCACAAATGTGAGACGTTTTCTCCACGTATGTGGAGGTGATCCTAAGGAGGTTTAAACCATGAAACCTAGTGAAAGAGTTTTCTCCACGTATGTGGAGGTGATCCCTATTCCACCAATCTAAATCAAATGAATCCCAGCGTTTTCTCCACGTATGTGGAGGTGATCCCACTGTTCAAGGTGTCGCACCTGACAGTTCAGGGTTTTCTCCACGTATGTGGAGGTGATCCCGTAATCACAATCGCAAATCCTAAGGAAGATTTGTTTTCTCCACGTATGTGGAGGTGATCCTACACCGCAAAGAAGTACTTGAACAAGCAAACGGTTTTCTCCACGTATGTGGAGGTGATCCCCATTGGTCTGCTGATGTAGCTTTAGTTGCTATAGTTTTCTCCACGTATGTGGAGGTGATCCTCATCTATTTCACTTTCCTGTTGCTCAGATTTTGTTTTCTCCACGTATGTGGAGGTGATCCTGGGGAAAGATAGTATCAAATAGCCTTCAATTAGTTTTCTCCACGTATGTGGAGGTGATCAAATGTGCTTTACAAAGTACAAAAAAGTGATATAGTTTTCTCCACGTATGTGGAGGTGATCCTGCTGCTACGAGCGCTTTTGGTCACATTAAAGAGTTTTCTCCACGTATGTGGAGGTGATCCTGACTGCAATGCAAGCAAGAGCGGACATAGCAAGTTTTCTCCACGTATGTGGAGGTGATCCCGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCGTTTTCTCCACGTATGTGGAGGTGATCCTGCTGCTACGAGCGCTTTTGGTCACATTAAAGAGTTTTCTCCACGTATGTGGAGGTGATCCTAAACAACTAAAGTATCTGGATCATTTTCTGCTGTTTTCTCCACGTATGTGGAGGTGATCCTCATTGATGCACCGGTACTTAACTCAAATCAAAGTTTTCTCCACGTATGTGGAGGTGATCCTGACTACGATATTTTCTTTTAATTATATCTTGGGTTTTCTCCACGTATGTGGAGGTGATCCTGGGGAAAGATAGTATCAAATAGCCTTCAATTAGTTTTCTCCACGTATGTGGAGGTGATCAAATGTGCTTTACAAAGTACAAAAAAGTGATATAGTTTTCTCCACGTATGTGGAGGTGATCCTACATTATTGTTCAATATTGACATTACAAGCTTGTTTTCTCCACGTATGTGGAGGTGATCCTGGGGAAAGATAGTATCAAATAGCCTTCAATTAGTTTTCTCCACGTATGTGGAGGTGATCAAATGTGCTTTACAAAGTACAAAAAAGTGATATAGTTTTCTCCACGTATGTGGAGGTGATCCTACATTATTGTTCAATATTGACATTACAAGCTTGTTTTCTCCACGTATGTGGAGGTGATCCTCACCAATGCCTGAAAGGAAACTACCTACACCAGTTTTCTCCACGTATGTGGAGGTGATCCTGGTAGGGGTAATGTGGAACAAGTTAAACCTTTGTTTTCTCCACGTATGTGGAGGTGATACC

>CP025200|1|1|546310-547986|PILER-CR
GTTTTCTCCACGTATGTGGAGGTGATC	CTGATGATGATAGTAATTTATCTGGACTAGTTAA
GTTTTCTCCACGTATGTGGAGGTGATC	CTGATTTTGCTGCAGGAATCGGCTTTGGCGGTGC
GTTTTCTCCACGTATGTGGAGGTGATC	CCAAATTTGTCAACGACTACCACAAATGTGAGAC
GTTTTCTCCACGTATGTGGAGGTGATC	CTAAGGAGGTTTAAACCATGAAACCTAGTGAAAGA
GTTTTCTCCACGTATGTGGAGGTGATC	CCTATTCCACCAATCTAAATCAAATGAATCCCAGC
GTTTTCTCCACGTATGTGGAGGTGATC	CCACTGTTCAAGGTGTCGCACCTGACAGTTCAGG
GTTTTCTCCACGTATGTGGAGGTGATC	CCGTAATCACAATCGCAAATCCTAAGGAAGATTT
GTTTTCTCCACGTATGTGGAGGTGATC	CTACACCGCAAAGAAGTACTTGAACAAGCAAACG
GTTTTCTCCACGTATGTGGAGGTGATC	CCCATTGGTCTGCTGATGTAGCTTTAGTTGCTATA
GTTTTCTCCACGTATGTGGAGGTGATC	CTCATCTATTTCACTTTCCTGTTGCTCAGATTTT
GTTTTCTCCACGTATGTGGAGGTGATC	CTGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATC	AAATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATC	CTGCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATC	CTGACTGCAATGCAAGCAAGAGCGGACATAGCAA
GTTTTCTCCACGTATGTGGAGGTGATC	CCGTCATAAATTAGCTTTCTGCCCTTTTGCGTCC
GTTTTCTCCACGTATGTGGAGGTGATC	CTGCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATC	CTAAACAACTAAAGTATCTGGATCATTTTCTGCT
GTTTTCTCCACGTATGTGGAGGTGATC	CTCATTGATGCACCGGTACTTAACTCAAATCAAA
GTTTTCTCCACGTATGTGGAGGTGATC	CTGACTACGATATTTTCTTTTAATTATATCTTGG
GTTTTCTCCACGTATGTGGAGGTGATC	CTGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATC	AAATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATC	CTACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATC	CTGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATC	AAATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATC	CTACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATC	CTCACCAATGCCTGAAAGGAAACTACCTACACCA
GTTTTCTCCACGTATGTGGAGGTGATC	CTGGTAGGGGTAATGTGGAACAAGTTAAACCTTT
GTTTTCTCCACGTATGTGGAGGTGATA

>CP025200|1|1|546310-547988|CRISPRCasFinder
GTTTTCTCCACGTATGTGGAGGTGATCCT	GATGATGATAGTAATTTATCTGGACTAGTTAA
GTTTTCTCCACGTATGTGGAGGTGATCCT	GATTTTGCTGCAGGAATCGGCTTTGGCGGTGC
GTTTTCTCCACGTATGTGGAGGTGATCCC	AAATTTGTCAACGACTACCACAAATGTGAGAC
GTTTTCTCCACGTATGTGGAGGTGATCCT	AAGGAGGTTTAAACCATGAAACCTAGTGAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCCC	TATTCCACCAATCTAAATCAAATGAATCCCAGC
GTTTTCTCCACGTATGTGGAGGTGATCCC	ACTGTTCAAGGTGTCGCACCTGACAGTTCAGG
GTTTTCTCCACGTATGTGGAGGTGATCCC	GTAATCACAATCGCAAATCCTAAGGAAGATTT
GTTTTCTCCACGTATGTGGAGGTGATCCT	ACACCGCAAAGAAGTACTTGAACAAGCAAACG
GTTTTCTCCACGTATGTGGAGGTGATCCC	CATTGGTCTGCTGATGTAGCTTTAGTTGCTATA
GTTTTCTCCACGTATGTGGAGGTGATCCT	CATCTATTTCACTTTCCTGTTGCTCAGATTTT
GTTTTCTCCACGTATGTGGAGGTGATCCT	GGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCAA	ATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCCT	GCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCCT	GACTGCAATGCAAGCAAGAGCGGACATAGCAA
GTTTTCTCCACGTATGTGGAGGTGATCCC	GTCATAAATTAGCTTTCTGCCCTTTTGCGTCC
GTTTTCTCCACGTATGTGGAGGTGATCCT	GCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCCT	AAACAACTAAAGTATCTGGATCATTTTCTGCT
GTTTTCTCCACGTATGTGGAGGTGATCCT	CATTGATGCACCGGTACTTAACTCAAATCAAA
GTTTTCTCCACGTATGTGGAGGTGATCCT	GACTACGATATTTTCTTTTAATTATATCTTGG
GTTTTCTCCACGTATGTGGAGGTGATCCT	GGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCAA	ATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCCT	ACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATCCT	GGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCAA	ATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCCT	ACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATCCT	CACCAATGCCTGAAAGGAAACTACCTACACCA
GTTTTCTCCACGTATGTGGAGGTGATCCT	GGTAGGGGTAATGTGGAACAAGTTAAACCTTT
GTTTTCTCCACGTATGTGGAGGTGATACC

>CP025200|1|1|546310-547987|CRT
GTTTTCTCCACGTATGTGGAGGTGATCC	TGATGATGATAGTAATTTATCTGGACTAGTTAA
GTTTTCTCCACGTATGTGGAGGTGATCC	TGATTTTGCTGCAGGAATCGGCTTTGGCGGTGC
GTTTTCTCCACGTATGTGGAGGTGATCC	CAAATTTGTCAACGACTACCACAAATGTGAGAC
GTTTTCTCCACGTATGTGGAGGTGATCC	TAAGGAGGTTTAAACCATGAAACCTAGTGAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCC	CTATTCCACCAATCTAAATCAAATGAATCCCAGC
GTTTTCTCCACGTATGTGGAGGTGATCC	CACTGTTCAAGGTGTCGCACCTGACAGTTCAGG
GTTTTCTCCACGTATGTGGAGGTGATCC	CGTAATCACAATCGCAAATCCTAAGGAAGATTT
GTTTTCTCCACGTATGTGGAGGTGATCC	TACACCGCAAAGAAGTACTTGAACAAGCAAACG
GTTTTCTCCACGTATGTGGAGGTGATCC	CCATTGGTCTGCTGATGTAGCTTTAGTTGCTATA
GTTTTCTCCACGTATGTGGAGGTGATCC	TCATCTATTTCACTTTCCTGTTGCTCAGATTTT
GTTTTCTCCACGTATGTGGAGGTGATCC	TGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCA	AATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCC	TGCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCC	TGACTGCAATGCAAGCAAGAGCGGACATAGCAA
GTTTTCTCCACGTATGTGGAGGTGATCC	CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCC
GTTTTCTCCACGTATGTGGAGGTGATCC	TGCTGCTACGAGCGCTTTTGGTCACATTAAAGA
GTTTTCTCCACGTATGTGGAGGTGATCC	TAAACAACTAAAGTATCTGGATCATTTTCTGCT
GTTTTCTCCACGTATGTGGAGGTGATCC	TCATTGATGCACCGGTACTTAACTCAAATCAAA
GTTTTCTCCACGTATGTGGAGGTGATCC	TGACTACGATATTTTCTTTTAATTATATCTTGG
GTTTTCTCCACGTATGTGGAGGTGATCC	TGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCA	AATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCC	TACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATCC	TGGGGAAAGATAGTATCAAATAGCCTTCAATTA
GTTTTCTCCACGTATGTGGAGGTGATCA	AATGTGCTTTACAAAGTACAAAAAAGTGATATA
GTTTTCTCCACGTATGTGGAGGTGATCC	TACATTATTGTTCAATATTGACATTACAAGCTT
GTTTTCTCCACGTATGTGGAGGTGATCC	TCACCAATGCCTGAAAGGAAACTACCTACACCA
GTTTTCTCCACGTATGTGGAGGTGATCC	TGGTAGGGGTAATGTGGAACAAGTTAAACCTTT
GTTTTCTCCACGTATGTGGAGGTGATAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025200.1\|AZN76148.1\|537301_537973_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	unknown	unknown	gnl\|CDD\|235140
CP025200.1\|AZN76154.1\|544824_546096_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
CP025200.1\|AZN76162.1\|561204_562035_+\|DNA-formamidopyrimidine-glycosylase	unknown	unknown	gnl\|CDD\|234899
CP025200.1\|AZN76160.1\|556608_557469_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
CP025200.1\|AZN76155.1\|550883_552584_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
CP025200.1\|AZN76161.1\|558535_561196_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
CP025200.1\|AZN76153.1\|543270_544812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
CP025200.1\|AZN76158.1\|555006_555663_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
CP025200.1\|AZN77518.1\|534998_536129_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
CP025200.1\|AZN76146.1\|536333_537050_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
CP025200.1\|AZN76151.1\|541624_542662_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP025200.1\|AZN76156.1\|552607_553201_+\|CRISPR-associated-protein-CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
CP025200.1\|AZN76147.1\|537050_537305_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	unknown	unknown	gnl\|CDD\|376904
CP025200.1\|AZN76157.1\|554290_555007_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
CP025200.1\|AZN76149.1\|537969_540198_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
CP025200.1\|AZN76150.1\|540155_541622_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
CP025200.1\|AZN77520.1\|553214_554291_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP025200.1\|AZN76159.1\|555664_556612_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP025200.1\|AZN76152.1\|542671_543274_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|187714
CP025200.1\|AZN77519.1\|548107_550891_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031

Protein	Function_ID	Function_description	E-value
CP025200.1\|AZN76148.1\|537301_537973_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	1.47123e-152
CP025200.1\|AZN76154.1\|544824_546096_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
CP025200.1\|AZN76162.1\|561204_562035_+\|DNA-formamidopyrimidine-glycosylase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	6.66274e-151
CP025200.1\|AZN76160.1\|556608_557469_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	1.98702e-42
CP025200.1\|AZN76155.1\|550883_552584_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.56777e-85
CP025200.1\|AZN76161.1\|558535_561196_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
CP025200.1\|AZN76153.1\|543270_544812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
CP025200.1\|AZN76158.1\|555006_555663_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.20829e-60
CP025200.1\|AZN77518.1\|534998_536129_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	0
CP025200.1\|AZN76146.1\|536333_537050_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	2.3312e-136
CP025200.1\|AZN76151.1\|541624_542662_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP025200.1\|AZN76156.1\|552607_553201_+\|CRISPR-associated-protein-CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.13279e-23
CP025200.1\|AZN76147.1\|537050_537305_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	gnl\|CDD\|376904	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase. This family forms a component of the de novo purine biosynthesis pathway.	4.46593e-28
CP025200.1\|AZN76157.1\|554290_555007_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.17177e-53
CP025200.1\|AZN76149.1\|537969_540198_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
CP025200.1\|AZN76150.1\|540155_541622_+\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
CP025200.1\|AZN77520.1\|553214_554291_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.14533e-151
CP025200.1\|AZN76159.1\|555664_556612_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.65951e-128
CP025200.1\|AZN76152.1\|542671_543274_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|187714	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART). Phosphoribosylglycinamide formyltransferase, also known as GAR transformylase or GART, is an essential enzyme that catalyzes the third step in de novo purine biosynthesis. This enzyme uses formyl tetrahydrofolate as a formyl group donor to produce 5'-phosphoribosyl-N-formylglycinamide. In prokaryotes, GART is a single domain protein but in most eukaryotes it is the C-terminal portion of a large multifunctional protein which also contains GAR synthetase and aminoimidazole ribonucleotide synthetase activities.	1.30213e-89
CP025200.1\|AZN77519.1\|548107_550891_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	6.26201e-78

>CP025200.1|AZN76154.1|544824_546096_+|phosphoribosylamine--glycine-ligase
MKDDLVLLVVGSGGREFAVAKKLKESPHVKTVYCAPGNVGMQTIGVETVPIEETDLDGLLDFAKSHNVDWTFVGPENVLCAGITDKFNKAGQKIFGPNQRAAQLEGSKDYALRFMSKYDIPTARYETYTSAETCIAGLKDFEYPVVIKEDGLAGGKGVTIAQNQDVAEETIREMFAGGQIAVVLEECLVGPEYSMFVVVSEDQFTILPMAQDHKRVGDGDKGPNTGGMGSYSPLPQLKKADRQRMIDEIVKPTMNGLVQGIYHYCGVLYIGLMMTESGPKVIEYNVRLGDPETQVVLPRIKNDFAMVIDAAVNHEKLPEIEENDNCVLGVVVCSKGYPTHPAPNVKIGKLPEGANTYIDYANVKGDLENLTGDGGRLFMVISEADNLVQAQDNVYSYLSKLDLLDCFYRHDIGNRALGDFNII
>CP025200.1|AZN76153.1|543270_544812_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase
MKRALISVSDKTNLVDFAKGLVQNGYEIISTGGTKKTLDEAGVKTISVEEVTNFPEILDGRVKTLNPYIHGGLLAKRDDLEHMATLEKLNIKPIDLVCVNLYPFKQTIEKPDVTTEEAIENIDIGGPSLLRAASKNYQDVTVVTDKNDYDLVLKEIAEKGNTTLETRAKLAAKVFRATAAYDAVIANYLTKQVGLEDPEKLTLTYDLKEKMRYGENSHQKAWLYEDAIPKSFSILQAHQLHGKKLSYNNIKDADEALRCIREFQDEPTVVAMKHMNPCGIGRGDTLEEAWDRAYEADSVSIFGGVIALNRKVDLATAKKMHKIFLEIIIAPGFDDDALEVLEKKKNIRLLELDFSKENEPTRPEIVSVMGGILQQEQDTLVENTDDWKVVTNAQPTEAQLKTMMFALKAVKHTKSNAIVVANDERTLGVGAGQPNRIDSAKIAIKHAGDAIDDRAVLSSDAFFPFNDCVEYAAKHGIKAIVQPGGSIRDKDSIEIADKYGVAMVFTGYRHFRH
>CP025200.1|AZN76152.1|542671_543274_+|phosphoribosylglycinamide-formyltransferase
MRVAILASGNGTNFEALTKQFKVGEIPGNEALMFCNHPNAQVIKRAERLGVPHETFSVKECGGKDTYEERLLKVLQDYQIDFIVLSGYLRMVGPKILNEYPNSIINLHPALLPNYPGLNSIERAFDDYKKGKIKETGVTVHFIDVHLDHGPIIAQQVVPIYPDDTVDTLEARVHETEHKLFPATLKKVLSQRMEKEEKQK
>CP025200.1|AZN76151.1|541624_542662_+|phosphoribosylformylglycinamidine-cyclo-ligase
MNRYKEAGVDVTAGYDLVNRIKPLVAATKRKGVMGSIGSFGGMFDLEELGYKHPVLVSGTDGVGTKLMIAQKMHKNDTVGIDCVAMCVNDVLAQGAEPLFFLDYIACGHNDPERLADVVKGVAEGCKQSGSALIGGETAEMPDMYEPHEYDLAGFSTGIAEKEDLLSSSLAKAGDHLIALPSSGVHSNGFSLIRKILFKDHDVSLDDKPAELSGKAVGETLLTPTRIYIKAVLPLVKKHLIHGIAHITGGGFIENLPRIYDDNLQAVINKGSWPGLPIFDYLKKIGVLSDQDCYNTFNMGVGLVLAVSSENVDAVKEQLNAENEEFYEIGKLTARPAGQAKIVIE
>CP025200.1|AZN76150.1|540155_541622_+|amidophosphoribosyltransferase
MEGVHPLFNEIKSLNEECGIFGVFGAPNASQLTYLGLHNLQHRGQEGAGIVSSDGEHLYQHRDRGLLSDAFADPNDLKKLVGDSAIGHVRYSTTGRNSIQNVQPFLFHFLDGDVALAHNGNLVNAVSLRDKLEKQGAIFQSSSDTEILIHLIRNHIKDGFISALKQGLNEVHGGFAFLLLQKDRMIAALDPNGIRPLCIGQLDNGAYVVSSETCALDIIGAKFVRDVQPGELIIIDRDGMKIDHFTEDTHLAICSMEYIYFARPDSIIHGVTVHNARRRMGRLLAREAPADVDMVIGVPNSSLSAASGYAEELHLPYEMGLVKNQYVARTFIQPTQALREKSVKLKLSAVRGVVAGKKIAVIDDSIVRGTTSKQIVRMLKEVGAKEVHLRIASPPFKFPCFYGIDISTRAELIAAHYSVEEMRKIIGADSLGFLSVDSLIKAINVPDRGDLSGLTVAYFNGKYPTKLDDYEAGYLASLNAQERRKRKE
>CP025200.1|AZN76149.1|537969_540198_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MKQAMTPEEIKEKKPYLDWSLSEHEYDYICDHLLHRLPNYTEIGLFSAMWSEHCSYKKSKPVLKLFPTKGKRVVQGPGEGAGVVDIDDGQAVVFKAESHNHPTTVEPYQGAATGVGGILRDVFSMGARPVAILDSLHFGELKDNPTMRYKMEETIKGVGDYGNCMGIPNLGGETTFDPCYNGNILLNAMNVGIMDIKDMEHGDATGVGNAVMYVGAKTGRDGIHGATFASADFSEEHATQRSAVQVGDPFMEKLLMEACLELILHHREWLVGIQDMGAAGIVSSSAEMATEGKSGMDLNLNLVPQREPNMSAYEIMLSESQERMLLCVKKGHEEDVKKIFDEYNLDAVTIGRITDDGRYVLHHDDQVVCDIPVVTLTEKVLEEKSEEKKPQRIIDVEQSENWQPEIEDAGQTLRALLNQPTIANDQFVTQQYDSQVRTDTIVGPGSDSGILRVRHTKKAIAMTTDTNGRFVYLDPKVGGQRTVLESATNIVASGALPLAITDCLNYGDPNDPEIFWELHQSCQGIADACEILETPVVSGNVSLYNENNGKAIYPSPMIGMVGLIKNYDHVIPMHMQTAGDKIYLVGKTDDDFAGSELQKMMTGKISGLPHAPNLPGIKDYLYKLQKLMAEGLVQSAHDLSEGGLGVSLAESVFDTDLGVNVKLDFNKNLLFSETPGRLIVSVAPENAAKFEQEMGDAVSEIGQVTDDKQLNISLTNDQVNEDVAKLQKIWKECIPCLMKSKA
>CP025200.1|AZN76148.1|537301_537973_+|phosphoribosylformylglycinamidine-synthase-subunit-PurQ
MKIAVVVFPGSNCDIDMYEAFHTVCKDDVEYVSYKEKSLDGFDVVVLPGGFSYGDYLRTGAIARFSNIIPAVENMAKEGKLVLGVCNGFQILTEMGLLPGALKKNDSLQFVCKTVTLEVENMHTPFTNEYADKEFIQIPIAHGDGSYYADENVLEELEDNHQVVFRYHGENPNGSLHDIAGICNKEGNVLGMMPHPERAVEEILGGIDGLPLFKSLLKAGVQA
>CP025200.1|AZN76147.1|537050_537305_+|phosphoribosylformylglycinamidine-synthase-subunit-PurS
MTTIRIYVTYKPSVFDPQGAAITNSVNSLGHDEVKKIVVGKFFDVTVDEDDLDKVKADVKDIAESLLVNFNMETYKIKVLEENA
>CP025200.1|AZN76146.1|536333_537050_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MAKLLYTGKVKEMWSTDDPEVLRVVYTDQATAGNGEKKDDFKNKAYLNNEISTLIFEYLAKNGIPTHFIKKISDTEELVKKCEMFPLEVVTRNIAAGHFSSRYGMGEGEKFDTPVEELFYKSDELDDPIMNESDAIALHIATAEEQKKIWELSRQVNKLLIPLFDKAGMELVDFKLEFGKDADGNIILADEFSPDNCRLWDKKTKEHMDKDVYRRDIGDLTTVYEQDLARIQEALKEI
>CP025200.1|AZN77518.1|534998_536129_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MEQGKTIGIIGGGQLGQMMALSAKYGGMKVITLDPTPNCPCGQVADKQIVAEYSDVKAIEELAKESDVLTYEFENVDLNALKDVADKVKVPQGTNLLYITKHRLREKNFLRSAGCMTAPYLPVKNMADLKAAIKKIGYNCVLKTCEGGYDGHGQEVLKSDADLENNEHIKEILATGDCILEGWVPFKVEASVMVARNAKGEVPVFPVSENYNAEEILHISIVPARVSKKIYDKAQAIARRIAEAIHLRGILGVELFILDNGDIYVNELAPRPHNSGHYSIEACNFDQFDVHDRAICNWPLPKIKLLSKVVMINVLGQHVAGVRKIIPQKSNWHFHDYGKAEVRHNRKMGHVTILTDDIEKTLQEINDTHIWETKVN
>CP025200.1|AZN77519.1|548107_550891_+|CRISPR-associated-helicase/endonuclease-Cas3
MIKLSNDVLSLWGKKNNDDDQKLWLPLVTHLVDTRHVINFLFNNWLSNGQKKILYETLSEEEALRLVRFLGQFHDIAKAIPAFQKEKSFNRNEDLDNEILEKLLRNGFEQIDETNLPSPHASHHTIAGEALLESKGLNESVGAIIGGHHGKPQSKFFTPDDQLDAYPENFYQDINNLEIEDHWKKVQDELIQFGLEKVGYKNLSEVPKVTQPQAVLLEGLLIMADWLASCQSLNGQSMFSLIPMDKGFYDVDEQSRFQNAILTWKTTDKWVAENVNDITSYYKKHWDFTPRPVQLKMSTEIGKIIDPGIIIVEAQTGIGKSEISMLAAQQTANVAGESGLFFGLPTQATSNAMFDRIDGWLKVIAKNQKSKLNLKLMHGKAQFNYTYRNLPEAESICDSDYGDVTVNSWFSGKKSILTDFTVGTIDQLLLMSLKQKHLFLKHLGFSGKVVIIDEVHAYDTYMSSYLNKSLEWLGAYHVPVIALSATLPKEKRKELIESYARGKYGRDFKLESEDDWQNNQAYPLLMYLDGPKLMQFDDFEKTKKDKKIDIVRFSADDQTTVNKIMSEIENGGIAGVVVNTIKRAQALKELIPSDIPSMILHSSFLAEDRAKLETELEKKVGKGAKRPKKMIVIGTQVLEQSLDIDFDVLFTDIAPIDLIFQRIGRLHRHDISRPQHLAKAKVYVMGINGPDDYGESNESIYEKYILRLTDYYLPNEILIPTDISKLVQKVYDEVSENLKKYSLTRTSRRRHSHANLASLDSQPDLKKLIKHTQNEKIKASTFQIDAPVFNKTIHGWLDSSGKELTENKASASVRDIKETIEVILLKKIKNDYCLINGQKLNSETVTSEIIAQQLIRLPSAITPNINSTISFLEQSTLCSFPGWQKDKWLKQSIALVLDENNEFELSGYHLKYSSRMGLSYEKVMKNG
>CP025200.1|AZN76155.1|550883_552584_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MVEQHFNLITQSWIKVIDKENKEQEVSLEELFKNIADYRQLAGEMKTQDLAIMRFLLAILTAVYSRCDFAGNIYDGLEVDRNTFEVLDVTQNPREYELETWKTLYQKGHFSPVLIDYLKTYSNEFDLFDRETPFYQVTREEYDKLVPENKVVSKGKGTVAIKQMRRTISESNNSKAIFSPVATEKMDRVSLGELVRWLITYQNFTGVTDKTKINSEEKFAASKGWLYSINPVFAQGKDLFDTLMLNLILGDEDGYKDQIPVWEFDRDTYIEDRLNGTVPNNRAEIYTNWSRVLHIEWKDNQPMIFTAALPGFELSGNNIEEVEPMTTWKSDKKTNTYRPESQYLGSLNKAMWRNFGHYIKVESQAKSDQKIPGIVIWLQFLKKEKILSKDRYISLSSVAMVSDGNATSQSPAAEFIDGMKINVAVLFDDDKTRAWPVRIEDMVDLTQKVGSYYYKFTQNVATFRNLSSKSEFASEQSAIFYERINQPFLDWLASLDIEQLQTEKLNEWKKEVDSIARDVANNLLQDASPHDFQLKKIQVGKNKEDKENIFTYYQRFILQIHHVLAS
>CP025200.1|AZN76156.1|552607_553201_+|CRISPR-associated-protein-CasB
MVKGDWNIAKITNSIIEDKLYDNGRFDKGALANLRGSRSLLSKKATAVMPIILSELPKNDLSVDGTPTYAENAVFMALRCYAIYQQGNDHYVNGSSSDSSKSIFEALAKLSQTDDLRDALDRRMSILLGSTNFNSVSNSIIHLLQILKSHDRNQTLNFALLSRDLYDFQFSSENARKVCLRWGRQYYWHDNGRNEQN
>CP025200.1|AZN77520.1|553214_554291_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKMSNLYLDINVLQSVPSSNINRDDTGAPKTAIYGGVTRSRVSSQSWKRAVRIAFKEETDNADWLEGYRTLDAPKMIAKKMMDLNSDLSLENATKKALEIFKDAKIKTDKDNQTKALLLISKGQINKLAKYALDNENMDAKEVKKAFSSDNSLDLALFGRMVADDPSLNVDAACQVAHAVSTHEIVPEYDYFTAVDDQKPEDTAGSAMLGTIEYNSSTLYRYANVNVKELIKNLGNKDLAVKGIELFVKDFLMAMPTGKENTFANKTVPQYAMITLRKDTPVNLVSAFEEPVESRDGYVQKSIDRLEKEYKDTQKFVEEPLKTWILTNKDSELKDKVDNISDLINQVSKTVSAKVDDE
>CP025200.1|AZN76157.1|554290_555007_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTLVIRLTAPLQSYGNEATFNRRTSNYYPSKSAVIGMIAAALGYRRDDSRINDLNNLKLAVRIDQPGKFMTDFQVVEYQKNSSSKTKKVTYRSYLQDAVFTVAIGSDDEKITRIKTALEHPKFQLFLGRRSNPPAGPLIMKEYDDDPMTVLKQLPWKASRWYQKRLKSKPYYFAEIIADADLVPDQPNFLVKDKVTSFDQKNRSHGYRAVVRERQKVLNPYADSTEHDAFKAVKEES
>CP025200.1|AZN76158.1|555006_555663_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVEIDDSNRRKLRDLTNLAAYHGWVEESFPSEEKSQFRHLWRIDQLKNKRYLLLVSPKKPVVKNLERYGVPGSAQIIDYDHYVNSLKEGQIMRFRLTANPVVRHSGKVIKAAMPEDKKNGETMRDRLKDWLFNRMVPNGFEIIKNDIDMYNVDIVSQKTLALYHKGCKPINLKQVTYEGILKITNLDRFKKALKQGIGREKAYGMGLITVIPIN
>CP025200.1|AZN76159.1|555664_556612_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MKKGMGAKKPELNELARAEDRITFLYIEHADLSKQDSAVTVIDSKGTVFVPAALISVLMLGPGVNVTHRAMELIGDSAMSVVWVGECGVRQYAHGRALNHSSRFIESQAKLVSNTRSRLSVARKMYEMRFPNENFSNLTMEQLRGKEGARIRKVYRDESKRTGVAWNKRQYKVDDFNSATPINKALTEAHQALYGLCYSVIVALGASPALGFIHTGHDLSFVYDFADLYKAKYSLPIAFDMVAKYGDDDIADRTRRAMRDVFHQGKLIKQMVKDLKDLLRIADGYDSIHVVMGLWDDREGLQKYGVQYREFDDKQ
>CP025200.1|AZN76160.1|556608_557469_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MIVITLSKVPASLRGDLTKWCQKVQTGVYVGNFNSKIRNLLWDKIVKNCGAGEATLIYSTNNELGYDFRTTRSDIEVIDCDGIPLVKAVTDNRISEKYGFSKAAKIHKAKIMKKKFSDAKTPKMIVSLDLETTGLDINKDKIISIGAVKESIDGERENFYRLIKCKSKIPKEVVNLTGISDAQIVKDGVEIATALKDLKKFIDKSLIIGYNVSFDIDFLNQALDECGEEQLSNSIKDVMPVAKKANMFLDDYRLETVLNSFKINNEHPHNALSDATATLNLAKKLL
>CP025200.1|AZN76161.1|558535_561196_+|DNA-polymerase-I
MADKKLLLIDGNSVAFRAFYALYRQLDRFTSPDGLHTNAIFTFKNMLDAILKQVDPTNILVAFDAGKVTFRTAMYKDYKGGRQKTPSELLEQMPVIREMLTDLGITSYELKNYEADDIIGTLSKMGEDAGYEVTVVTGDRDLTQLASDKTTVLITKNGVGDTEAYTPEHMKEVNGITPTEFIDMKALMGDNSDNYPGVEGIGPKTASNLIQKYGSVENLYDHIDDLKKSKRKERLIRDKDKAFLAKKLAAIDRESPVTVTLEDTIKKDPNYEKLRDLYERLGFRKFLAELNLETAGEDSGDTENYDYVELTEDNVAELDDLKENEISFYLEMLGDNYHLAPFEGFSLKVGDKVYVSKDIALLQEKPLKDILENRKIQKDVFDLKRMTVGLHRLDVIVEGLNYDMLLASYLVNNEKNSNDLGEIAHLYDEYSIKTDLEVYGKGKKQAIPEDKEFFKHLAAKVCVIEKLKPELLKQLKEHEQDDLFETIEIPTARVLAKMEINGIKVEASTLIELQNEFAVKLKELEDKIYKQAGEEFNLNSPKQLGHILFEKLNLPVLKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIFSCDYSQVELRVLSHVSGDQNMQEAFKTGYDIHAHTAMRIFHLDSPDEVTPLMRRHAKAVNFGIVYGISDYGLSKNLGISRKRAKEFIDNYFEQYPQIKDYMDRAVQEAREKGYAETIMHRRRYLPDIHAKKFTVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVIQVHDELIFDVPKDELETIKKIVPEIMQSAVKLDVPLIADSGWGHNWYDAK
>CP025200.1|AZN76162.1|561204_562035_+|DNA-formamidopyrimidine-glycosylase
MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPMIVATDHDEFLKELPGKKIIGIDRYAKYLLIRLSDNLTIVSHLRMEGKYHLTTEDAPKDKHDHVEFVFTDKTALRYNDVRKFGRMQLIITGTERQVTGIKKLGPEPNTPEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGLGNIYVDETLWQSKIHPLSITNKIPAEKVADLWENINQTIALATEKRGTTVHSYLDANGEVGGYQEMLQVYGHVGEECPRCGNIFEKIKVSGRGTTFCPHCQVIYK

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Crispr_ID: CP025200_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025200_2

557572-558392

TypeI-E

I-B,III-A,III-B

Consensus_repeat	Method
AAAATTTTCTCCACGTATGTGGAGGTGATCCCA	PILER-CR
ATTTTCTCCACGTATGTGGAGGTGATCC	CRISPRCasFinder
ATTTTCTCCACGTATGTGGAGGTGATCC	CRT
ATTTTCTCCACGTATGTGGAGGTGATCCTA	PILER-CR

13 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP025200_2

>merge|CP025200|2|557572-558392|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTTTCTCCACGTATGTGGAGGTGATCCTCATATTTTTGTTATTTCTTGTTTCAAGTCGACATTTTCTCCACGTATGTGGAGGTGATCCCATTGATAGAGTTCCTCGTCCTACGCCTAAAAAATTTTCTCCACGTATGTGGAGGTGATCCCAAGTCAATATATTCACCAGAAAGCGTTGTTCCATTTTCTCCACGTATGTGGAGGTGATCCCACAGTTTTGCCGAGGCTGGTAAGGCACTAGGCATTTTCTCCACGTATGTGGAGGTGATCCTGGATTGCCAGGATAATTAGGATTAGTTGAAGTATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTATTGATGCAACACCTAGCGCAAGTCAACCTGGATTTTCTCCACGTATGTGGAGGTGATCCCAGGGTGGTTTTAAGTACGAGATTGACTACGATATTTTCTCCACGTATGTGGAGGTGATCCTGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGATTTTCTCCACGTATGTGGAGGTGATCCTATATGCGACTTATTTCTTACGATGAGATTCCAATTTTCTCCACGAAAGTGGAGGTGATCCTCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTATTTTTTCTATGAAAGTGGAGGTAACCCTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCACAAAAGTGGAGCTACATT

>CP025200|2|2|557572-557723|PILER-CR
ATTTTCTCCACGTATGTGGAGGTGATCCTCATATTTT	TGTTATTTCTTGTTTCAAGTCGACATT
TTCTCCACGTATGTGGAGGTGATCCCATTGATAGAGT	TCCTCGTCCTACGCCTAAAAAATTTTC
TCCACGTATGTGGAGGTGATCCCAAGTCAATATATTCACCAGAAAGCGTTGTTCCATTTTCTCCACGTATGTGGAGGTGATCCCACAGTTTTGCCGAGGCTGGTAAGGCACTAGGCATTTTCTCCACGTATGTGGAGGTGATCCTGGATTGCCAGGATAATTAGGATTAGTTGAAGTATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTA	TTGATGCAACACCTAGCGCAAGTCAACCTGG
ATTTTCTCCACGTATGTGGAGGTGATCCCA	GGGTGGTTTTAAGTACGAGATTGACTACGAT
ATTTTCTCCACGTATGTGGAGGTGATCCTG	GCGAGAAGCTTATGAAGATCCTAGGAAAAGG


>CP025200|2|2|557572-558392|CRISPRCasFinder
ATTTTCTCCACGTATGTGGAGGTGATCC	TCATATTTTTGTTATTTCTTGTTTCAAGTCGAC
ATTTTCTCCACGTATGTGGAGGTGATCC	CATTGATAGAGTTCCTCGTCCTACGCCTAAAAA
ATTTTCTCCACGTATGTGGAGGTGATCC	CAAGTCAATATATTCACCAGAAAGCGTTGTTCC
ATTTTCTCCACGTATGTGGAGGTGATCC	CACAGTTTTGCCGAGGCTGGTAAGGCACTAGGC
ATTTTCTCCACGTATGTGGAGGTGATCC	TGGATTGCCAGGATAATTAGGATTAGTTGAAGT
ATTTTCTCCACGTATGTGGAGGTGATCC	TTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTC
ATTTTCTCCACGTATGTGGAGGTGATCC	TTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTC
ATTTTCTCCACGTATGTGGAGGTGATCC	TATTGATGCAACACCTAGCGCAAGTCAACCTGG
ATTTTCTCCACGTATGTGGAGGTGATCC	CAGGGTGGTTTTAAGTACGAGATTGACTACGAT
ATTTTCTCCACGTATGTGGAGGTGATCC	TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGG
ATTTTCTCCACGTATGTGGAGGTGATCC	TATATGCGACTTATTTCTTACGATGAGATTCCA
ATTTTCTCCACGAAAGTGGAGGTGATCC	TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTT
ATTTTTTCTATGAAAGTGGAGGTAACCC	TGAAGCACAATATTTTTAAAATAATTGGGCAAG
ATTTTCTCCACAAAAGTGGAGCTACATT

>CP025200|2|2|557572-558331|CRT
ATTTTCTCCACGTATGTGGAGGTGATCC	TCATATTTTTGTTATTTCTTGTTTCAAGTCGAC
ATTTTCTCCACGTATGTGGAGGTGATCC	CATTGATAGAGTTCCTCGTCCTACGCCTAAAAA
ATTTTCTCCACGTATGTGGAGGTGATCC	CAAGTCAATATATTCACCAGAAAGCGTTGTTCC
ATTTTCTCCACGTATGTGGAGGTGATCC	CACAGTTTTGCCGAGGCTGGTAAGGCACTAGGC
ATTTTCTCCACGTATGTGGAGGTGATCC	TGGATTGCCAGGATAATTAGGATTAGTTGAAGT
ATTTTCTCCACGTATGTGGAGGTGATCC	TTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTC
ATTTTCTCCACGTATGTGGAGGTGATCC	TTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTC
ATTTTCTCCACGTATGTGGAGGTGATCC	TATTGATGCAACACCTAGCGCAAGTCAACCTGG
ATTTTCTCCACGTATGTGGAGGTGATCC	CAGGGTGGTTTTAAGTACGAGATTGACTACGAT
ATTTTCTCCACGTATGTGGAGGTGATCC	TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGG
ATTTTCTCCACGTATGTGGAGGTGATCC	TATATGCGACTTATTTCTTACGATGAGATTCCA
ATTTTCTCCACGAAAGTGGAGGTGATCC	TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTT
ATTTTTTCTATGAAAGTGGAGGTAACCC

>CP025200|2|3|557999-558211|PILER-CR
	TGTTATTTCTTGTTTCAAGTCGACATT
TTCTCCACGTATGTGGAGGTGATCCCATTGATAGAGT	TCCTCGTCCTACGCCTAAAAAATTTTC
TCCACGTATGTGGAGGTGATCCCAAGTCAATATATTCACCAGAAAGCGTTGTTCCATTTTCTCCACGTATGTGGAGGTGATCCCACAGTTTTGCCGAGGCTGGTAAGGCACTAGGCATTTTCTCCACGTATGTGGAGGTGATCCTGGATTGCCAGGATAATTAGGATTAGTTGAAGTATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTTTGAAAAGTTTTCCACCGCCCTTTTTGGTGTCATTTTCTCCACGTATGTGGAGGTGATCCTA	TTGATGCAACACCTAGCGCAAGTCAACCTGG
ATTTTCTCCACGTATGTGGAGGTGATCCCA	GGGTGGTTTTAAGTACGAGATTGACTACGAT
ATTTTCTCCACGTATGTGGAGGTGATCCTG	GCGAGAAGCTTATGAAGATCCTAGGAAAAGG
ATTTTCTCCACGTATGTGGAGGTGATCCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP025200.1\|AZN76161.1\|558535_561196_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
CP025200.1\|AZN76154.1\|544824_546096_+\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
CP025200.1\|AZN76162.1\|561204_562035_+\|DNA-formamidopyrimidine-glycosylase	unknown	unknown	gnl\|CDD\|234899
CP025200.1\|AZN76169.1\|568734_569250_+\|hypothetical-protein	unknown	unknown	unknown
CP025200.1\|AZN76168.1\|568168_568594_+\|DUF3021-domain-containing-protein	unknown	unknown	gnl\|CDD\|378668
CP025200.1\|AZN76166.1\|565645_567580_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
CP025200.1\|AZN76158.1\|555006_555663_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
CP025200.1\|AZN76159.1\|555664_556612_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP025200.1\|AZN76156.1\|552607_553201_+\|CRISPR-associated-protein-CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
CP025200.1\|AZN76155.1\|550883_552584_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
CP025200.1\|AZN76157.1\|554290_555007_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
CP025200.1\|AZN76164.1\|562636_563104_+\|transcriptional-regulator-NrdR	unknown	unknown	gnl\|CDD\|234774
CP025200.1\|AZN76160.1\|556608_557469_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
CP025200.1\|AZN76165.1\|563106_564447_+\|chromosome-replication-initiation-protein	unknown	unknown	gnl\|CDD\|226138
CP025200.1\|AZN76163.1\|562031_562634_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
CP025200.1\|AZN77520.1\|553214_554291_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP025200.1\|AZN77521.1\|564456_565365_+\|primosomal-protein-DnaI	unknown	unknown	gnl\|CDD\|236353
CP025200.1\|AZN76153.1\|543270_544812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
CP025200.1\|AZN77519.1\|548107_550891_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
CP025200.1\|AZN76167.1\|567737_568172_+\|LytTR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197918

Protein	Function_ID	Function_description	E-value
CP025200.1\|AZN76161.1\|558535_561196_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
CP025200.1\|AZN76154.1\|544824_546096_+\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
CP025200.1\|AZN76162.1\|561204_562035_+\|DNA-formamidopyrimidine-glycosylase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	6.66274e-151
CP025200.1\|AZN76168.1\|568168_568594_+\|DUF3021-domain-containing-protein	gnl\|CDD\|378668	pfam11457, DUF3021, Protein of unknown function (DUF3021). This is a bacterial family of uncharacterized proteins.	6.30653e-20
CP025200.1\|AZN76166.1\|565645_567580_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
CP025200.1\|AZN76158.1\|555006_555663_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.20829e-60
CP025200.1\|AZN76159.1\|555664_556612_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	6.65951e-128
CP025200.1\|AZN76156.1\|552607_553201_+\|CRISPR-associated-protein-CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.13279e-23
CP025200.1\|AZN76155.1\|550883_552584_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.56777e-85
CP025200.1\|AZN76157.1\|554290_555007_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.17177e-53
CP025200.1\|AZN76164.1\|562636_563104_+\|transcriptional-regulator-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	2.91371e-84
CP025200.1\|AZN76160.1\|556608_557469_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	1.98702e-42
CP025200.1\|AZN76165.1\|563106_564447_+\|chromosome-replication-initiation-protein	gnl\|CDD\|226138	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].	1.55736e-32
CP025200.1\|AZN76163.1\|562031_562634_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	6.63025e-87
CP025200.1\|AZN77520.1\|553214_554291_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.14533e-151
CP025200.1\|AZN77521.1\|564456_565365_+\|primosomal-protein-DnaI	gnl\|CDD\|236353	PRK08939, PRK08939, primosomal protein DnaI; Reviewed.	6.57121e-152
CP025200.1\|AZN76153.1\|543270_544812_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
CP025200.1\|AZN77519.1\|548107_550891_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	6.26201e-78
CP025200.1\|AZN76167.1\|567737_568172_+\|LytTR-family-transcriptional-regulator	gnl\|CDD\|197918	smart00850, LytTR, LytTr DNA-binding domain. This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern.	8.79529e-20

>CP025200.1|AZN76160.1|556608_557469_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MIVITLSKVPASLRGDLTKWCQKVQTGVYVGNFNSKIRNLLWDKIVKNCGAGEATLIYSTNNELGYDFRTTRSDIEVIDCDGIPLVKAVTDNRISEKYGFSKAAKIHKAKIMKKKFSDAKTPKMIVSLDLETTGLDINKDKIISIGAVKESIDGERENFYRLIKCKSKIPKEVVNLTGISDAQIVKDGVEIATALKDLKKFIDKSLIIGYNVSFDIDFLNQALDECGEEQLSNSIKDVMPVAKKANMFLDDYRLETVLNSFKINNEHPHNALSDATATLNLAKKLL
>CP025200.1|AZN76159.1|555664_556612_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MKKGMGAKKPELNELARAEDRITFLYIEHADLSKQDSAVTVIDSKGTVFVPAALISVLMLGPGVNVTHRAMELIGDSAMSVVWVGECGVRQYAHGRALNHSSRFIESQAKLVSNTRSRLSVARKMYEMRFPNENFSNLTMEQLRGKEGARIRKVYRDESKRTGVAWNKRQYKVDDFNSATPINKALTEAHQALYGLCYSVIVALGASPALGFIHTGHDLSFVYDFADLYKAKYSLPIAFDMVAKYGDDDIADRTRRAMRDVFHQGKLIKQMVKDLKDLLRIADGYDSIHVVMGLWDDREGLQKYGVQYREFDDKQ
>CP025200.1|AZN76158.1|555006_555663_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVEIDDSNRRKLRDLTNLAAYHGWVEESFPSEEKSQFRHLWRIDQLKNKRYLLLVSPKKPVVKNLERYGVPGSAQIIDYDHYVNSLKEGQIMRFRLTANPVVRHSGKVIKAAMPEDKKNGETMRDRLKDWLFNRMVPNGFEIIKNDIDMYNVDIVSQKTLALYHKGCKPINLKQVTYEGILKITNLDRFKKALKQGIGREKAYGMGLITVIPIN
>CP025200.1|AZN76157.1|554290_555007_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTLVIRLTAPLQSYGNEATFNRRTSNYYPSKSAVIGMIAAALGYRRDDSRINDLNNLKLAVRIDQPGKFMTDFQVVEYQKNSSSKTKKVTYRSYLQDAVFTVAIGSDDEKITRIKTALEHPKFQLFLGRRSNPPAGPLIMKEYDDDPMTVLKQLPWKASRWYQKRLKSKPYYFAEIIADADLVPDQPNFLVKDKVTSFDQKNRSHGYRAVVRERQKVLNPYADSTEHDAFKAVKEES
>CP025200.1|AZN77520.1|553214_554291_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKMSNLYLDINVLQSVPSSNINRDDTGAPKTAIYGGVTRSRVSSQSWKRAVRIAFKEETDNADWLEGYRTLDAPKMIAKKMMDLNSDLSLENATKKALEIFKDAKIKTDKDNQTKALLLISKGQINKLAKYALDNENMDAKEVKKAFSSDNSLDLALFGRMVADDPSLNVDAACQVAHAVSTHEIVPEYDYFTAVDDQKPEDTAGSAMLGTIEYNSSTLYRYANVNVKELIKNLGNKDLAVKGIELFVKDFLMAMPTGKENTFANKTVPQYAMITLRKDTPVNLVSAFEEPVESRDGYVQKSIDRLEKEYKDTQKFVEEPLKTWILTNKDSELKDKVDNISDLINQVSKTVSAKVDDE
>CP025200.1|AZN76156.1|552607_553201_+|CRISPR-associated-protein-CasB
MVKGDWNIAKITNSIIEDKLYDNGRFDKGALANLRGSRSLLSKKATAVMPIILSELPKNDLSVDGTPTYAENAVFMALRCYAIYQQGNDHYVNGSSSDSSKSIFEALAKLSQTDDLRDALDRRMSILLGSTNFNSVSNSIIHLLQILKSHDRNQTLNFALLSRDLYDFQFSSENARKVCLRWGRQYYWHDNGRNEQN
>CP025200.1|AZN76155.1|550883_552584_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MVEQHFNLITQSWIKVIDKENKEQEVSLEELFKNIADYRQLAGEMKTQDLAIMRFLLAILTAVYSRCDFAGNIYDGLEVDRNTFEVLDVTQNPREYELETWKTLYQKGHFSPVLIDYLKTYSNEFDLFDRETPFYQVTREEYDKLVPENKVVSKGKGTVAIKQMRRTISESNNSKAIFSPVATEKMDRVSLGELVRWLITYQNFTGVTDKTKINSEEKFAASKGWLYSINPVFAQGKDLFDTLMLNLILGDEDGYKDQIPVWEFDRDTYIEDRLNGTVPNNRAEIYTNWSRVLHIEWKDNQPMIFTAALPGFELSGNNIEEVEPMTTWKSDKKTNTYRPESQYLGSLNKAMWRNFGHYIKVESQAKSDQKIPGIVIWLQFLKKEKILSKDRYISLSSVAMVSDGNATSQSPAAEFIDGMKINVAVLFDDDKTRAWPVRIEDMVDLTQKVGSYYYKFTQNVATFRNLSSKSEFASEQSAIFYERINQPFLDWLASLDIEQLQTEKLNEWKKEVDSIARDVANNLLQDASPHDFQLKKIQVGKNKEDKENIFTYYQRFILQIHHVLAS
>CP025200.1|AZN77519.1|548107_550891_+|CRISPR-associated-helicase/endonuclease-Cas3
MIKLSNDVLSLWGKKNNDDDQKLWLPLVTHLVDTRHVINFLFNNWLSNGQKKILYETLSEEEALRLVRFLGQFHDIAKAIPAFQKEKSFNRNEDLDNEILEKLLRNGFEQIDETNLPSPHASHHTIAGEALLESKGLNESVGAIIGGHHGKPQSKFFTPDDQLDAYPENFYQDINNLEIEDHWKKVQDELIQFGLEKVGYKNLSEVPKVTQPQAVLLEGLLIMADWLASCQSLNGQSMFSLIPMDKGFYDVDEQSRFQNAILTWKTTDKWVAENVNDITSYYKKHWDFTPRPVQLKMSTEIGKIIDPGIIIVEAQTGIGKSEISMLAAQQTANVAGESGLFFGLPTQATSNAMFDRIDGWLKVIAKNQKSKLNLKLMHGKAQFNYTYRNLPEAESICDSDYGDVTVNSWFSGKKSILTDFTVGTIDQLLLMSLKQKHLFLKHLGFSGKVVIIDEVHAYDTYMSSYLNKSLEWLGAYHVPVIALSATLPKEKRKELIESYARGKYGRDFKLESEDDWQNNQAYPLLMYLDGPKLMQFDDFEKTKKDKKIDIVRFSADDQTTVNKIMSEIENGGIAGVVVNTIKRAQALKELIPSDIPSMILHSSFLAEDRAKLETELEKKVGKGAKRPKKMIVIGTQVLEQSLDIDFDVLFTDIAPIDLIFQRIGRLHRHDISRPQHLAKAKVYVMGINGPDDYGESNESIYEKYILRLTDYYLPNEILIPTDISKLVQKVYDEVSENLKKYSLTRTSRRRHSHANLASLDSQPDLKKLIKHTQNEKIKASTFQIDAPVFNKTIHGWLDSSGKELTENKASASVRDIKETIEVILLKKIKNDYCLINGQKLNSETVTSEIIAQQLIRLPSAITPNINSTISFLEQSTLCSFPGWQKDKWLKQSIALVLDENNEFELSGYHLKYSSRMGLSYEKVMKNG
>CP025200.1|AZN76154.1|544824_546096_+|phosphoribosylamine--glycine-ligase
MKDDLVLLVVGSGGREFAVAKKLKESPHVKTVYCAPGNVGMQTIGVETVPIEETDLDGLLDFAKSHNVDWTFVGPENVLCAGITDKFNKAGQKIFGPNQRAAQLEGSKDYALRFMSKYDIPTARYETYTSAETCIAGLKDFEYPVVIKEDGLAGGKGVTIAQNQDVAEETIREMFAGGQIAVVLEECLVGPEYSMFVVVSEDQFTILPMAQDHKRVGDGDKGPNTGGMGSYSPLPQLKKADRQRMIDEIVKPTMNGLVQGIYHYCGVLYIGLMMTESGPKVIEYNVRLGDPETQVVLPRIKNDFAMVIDAAVNHEKLPEIEENDNCVLGVVVCSKGYPTHPAPNVKIGKLPEGANTYIDYANVKGDLENLTGDGGRLFMVISEADNLVQAQDNVYSYLSKLDLLDCFYRHDIGNRALGDFNII
>CP025200.1|AZN76153.1|543270_544812_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/inosine-monophosphate-cyclohydrolase
MKRALISVSDKTNLVDFAKGLVQNGYEIISTGGTKKTLDEAGVKTISVEEVTNFPEILDGRVKTLNPYIHGGLLAKRDDLEHMATLEKLNIKPIDLVCVNLYPFKQTIEKPDVTTEEAIENIDIGGPSLLRAASKNYQDVTVVTDKNDYDLVLKEIAEKGNTTLETRAKLAAKVFRATAAYDAVIANYLTKQVGLEDPEKLTLTYDLKEKMRYGENSHQKAWLYEDAIPKSFSILQAHQLHGKKLSYNNIKDADEALRCIREFQDEPTVVAMKHMNPCGIGRGDTLEEAWDRAYEADSVSIFGGVIALNRKVDLATAKKMHKIFLEIIIAPGFDDDALEVLEKKKNIRLLELDFSKENEPTRPEIVSVMGGILQQEQDTLVENTDDWKVVTNAQPTEAQLKTMMFALKAVKHTKSNAIVVANDERTLGVGAGQPNRIDSAKIAIKHAGDAIDDRAVLSSDAFFPFNDCVEYAAKHGIKAIVQPGGSIRDKDSIEIADKYGVAMVFTGYRHFRH
>CP025200.1|AZN76161.1|558535_561196_+|DNA-polymerase-I
MADKKLLLIDGNSVAFRAFYALYRQLDRFTSPDGLHTNAIFTFKNMLDAILKQVDPTNILVAFDAGKVTFRTAMYKDYKGGRQKTPSELLEQMPVIREMLTDLGITSYELKNYEADDIIGTLSKMGEDAGYEVTVVTGDRDLTQLASDKTTVLITKNGVGDTEAYTPEHMKEVNGITPTEFIDMKALMGDNSDNYPGVEGIGPKTASNLIQKYGSVENLYDHIDDLKKSKRKERLIRDKDKAFLAKKLAAIDRESPVTVTLEDTIKKDPNYEKLRDLYERLGFRKFLAELNLETAGEDSGDTENYDYVELTEDNVAELDDLKENEISFYLEMLGDNYHLAPFEGFSLKVGDKVYVSKDIALLQEKPLKDILENRKIQKDVFDLKRMTVGLHRLDVIVEGLNYDMLLASYLVNNEKNSNDLGEIAHLYDEYSIKTDLEVYGKGKKQAIPEDKEFFKHLAAKVCVIEKLKPELLKQLKEHEQDDLFETIEIPTARVLAKMEINGIKVEASTLIELQNEFAVKLKELEDKIYKQAGEEFNLNSPKQLGHILFEKLNLPVLKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIFSCDYSQVELRVLSHVSGDQNMQEAFKTGYDIHAHTAMRIFHLDSPDEVTPLMRRHAKAVNFGIVYGISDYGLSKNLGISRKRAKEFIDNYFEQYPQIKDYMDRAVQEAREKGYAETIMHRRRYLPDIHAKKFTVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVIQVHDELIFDVPKDELETIKKIVPEIMQSAVKLDVPLIADSGWGHNWYDAK
>CP025200.1|AZN76162.1|561204_562035_+|DNA-formamidopyrimidine-glycosylase
MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPMIVATDHDEFLKELPGKKIIGIDRYAKYLLIRLSDNLTIVSHLRMEGKYHLTTEDAPKDKHDHVEFVFTDKTALRYNDVRKFGRMQLIITGTERQVTGIKKLGPEPNTPEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGLGNIYVDETLWQSKIHPLSITNKIPAEKVADLWENINQTIALATEKRGTTVHSYLDANGEVGGYQEMLQVYGHVGEECPRCGNIFEKIKVSGRGTTFCPHCQVIYK
>CP025200.1|AZN76163.1|562031_562634_+|dephospho-CoA-kinase
MTYVLALTGGIATGKSTADQFFKNKNIPVVDCDQIAHDLMKPKNASWQAIKDNFGTEYLNSDQTINRKKLGQLVFSDPTALNKLNQLTHPLIFDKTIQKIKMYQDKDIVILDAPVYFESNLDKKKIANGVLVITLPEATQINRLKQRNNLTDEEAKMRIKSQMPLNKKAQMADFVIANTGTIEELENKLEQLLIKIKEEG
>CP025200.1|AZN76164.1|562636_563104_+|transcriptional-regulator-NrdR
MECPNCHQNASRVIDSRPSDENRAIRRRRECENCGFRFTTFERIETAPLLVVKNDGTREPFSRKKILHGVMAAGQKRPISSEQFEHLVDQVENKVRKQGVSEISSKKIGQYVMDDLADLDDVAYIRFASIYREFKDMSSFMKTMEDMMAKKEKGN
>CP025200.1|AZN76165.1|563106_564447_+|chromosome-replication-initiation-protein
MFETSDPKHLYYVANQITLFPEDEKILIKLYQPLVGAVAVSLYHTLVNDYDPYGMISEAKGIYSLQEQLDCSLKQMFNSLHKLEAVGLVQTYLSDNVFNNILVFKLLKIPSSDNFFSTPLLASLLKEKVGVTTFHNLSHNFAQETKLKERAIKNARDVSATFFDVFRLPGDEAITPSNDVMQAAQENQSYEVKEAKVNDRDSIDWDVIKDQYEIYQIPASEVDAKKNQIRGLMQTYGLTEKEFVDESLPCLHGSYTLNMRDISNTIAENYKRMSTRENVQKQLSQGQEKALAAIKGMDDDDRKLLKEANENSPAEFLYKLKTQKGGITSANEKQIINNLHTQYGLPEDLINILTYTCLTYDTVISSNLAYKIANDWLQHGVATATQALQYVKKRRDSFGKKQRVTRNFQPKRVEKGTDWSKKKAKKDAGMSTEQLKNLFKDLNNKK
>CP025200.1|AZN77521.1|564456_565365_+|primosomal-protein-DnaI
MEPIGNVIKKIVKERNLGSEEDILNQVLQDPDINAFLQANKAKIDQKMIKNSMSGLYEFYSQKRNPSKVMAGYAPQLFLNGKVIDVRYAPTQAKAAQDRKRAAKKRLHLIDLPVRLHDVELSKIDITDDRNQVLTLIYDFLNKYSKDSHQQGLYLSGDFGVGKTYILAGLANYVVTNMDKDVVFLHVPTFIAGLASHFGDNSLQDEIRRLSECDLLILDDIGAETLSQWSRDDVLGVILQARMDNVLPTFFSSNLDMEALESHFEETRNATDPVKARRLMQRVRFLAKEVVVSGPDRRNSLR
>CP025200.1|AZN76166.1|565645_567580_+|threonine--tRNA-ligase
MSFSVTLPDGSKKEFDKAVSVKEVASSIATSLGKAAVGAKVNGQVKPLDYEIDSDVEIAIITDKDEEGLDILRATAAFAFEAVAKKKYPELRLGQHVADEGGFYVDTDKKDQIKVTELPELEKAMEKLIKSGQPIEHVVMDKSELEEMFKDDPFKSDLLKKIDSDKVDAYKLGDFVDFGFDALLPNTGKIKHFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKEAALKEDLKRRAEIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRVVERYIIDREVADGYKHVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIYKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVELDQVQSEFAKILKLIMDVYRDFDITDYYFRLSYRDPKNTDKYFANDEMWERSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGKDGEEHRPVMVHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRQELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKNGSVNVRRYGTDEEISKSLDDFINEIDADVKSYSREN
>CP025200.1|AZN76167.1|567737_568172_+|LytTR-family-transcriptional-regulator
MKIKFNVDPNLSEEKAEFWLKKMTEKMKRITKELRSEQDFLWGYQDRDAHAIKFSQIFAIQVENEKTLICTEADSYVFRGRLYQVEKILPDNFVVVSRSSIVNYHLIDHLEIIRIGNIDAIMKNGLRIQVARRKIKYLKERIGL
>CP025200.1|AZN76168.1|568168_568594_+|DUF3021-domain-containing-protein
MKNLKQLLVSGLIGVGIGMSWLAVEILGMYYSENLTKSTINVSTFLFWVLASFLIGVFFFLAGLVFNNDSWSLRKQIFINFFVCLAAWLVFNFYLNSFDFVGMNLLLVIGEFIIMYTIAYGAYFYHLRTEVKQINEKLKKE
>CP025200.1|AZN76169.1|568734_569250_+|hypothetical-protein
MKKKVFVFLAVFLMVLGFASANATTANAASWGAKKVFTTPKNTRGTWYHKEDGKIIKTKITAHTINGLKLYQVLKGKESDKWADKLAAADEKANYKLADKVSSSMFEAYTFKFHGVTGFNANGWLAGAGDGYYYVPVKKTIKGKKVNALRVGEGAGNYFVSYAYQNKKLIK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_015919	Borreliella bissettii DN127 plasmid lp54, complete sequence	35047-35073	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	35108-35134	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	35010-35036	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	35010-35036	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP015809	Borrelia mayonii strain MN14-1539 plasmid lp54	35437-35463	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	34982-35008	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	35020-35046	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP015795	Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence	35453-35479	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_013128	Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence	32770-32796	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	34961-34987	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_006129	Borreliella bavariensis PBi plasmid lp54, complete sequence	35548-35574	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	35010-35036	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP009119	Borreliella valaisiana Tom4006 plasmid lp54, complete sequence	18900-18926	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	18759-18785	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	20104-20130	3	0.889
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	62807-62833	4	0.852
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP042473	Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence	14112-14138	4	0.852
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	30773-30799	4	0.852
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP044536	Borrelia sp. CA690 plasmid lp54, complete sequence	34421-34447	4	0.852
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	CP020758	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-19, complete sequence	62715-62741	4	0.852
CP025200_1	1.38\|546952\|32\|CP025200\|CRISPRCasFinder	546952-546983	32	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55716-55747	5	0.844
CP025200_1	1.47\|547501\|32\|CP025200\|CRISPRCasFinder	547501-547532	32	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55716-55747	5	0.844
CP025200_1	1.50\|547684\|32\|CP025200\|CRISPRCasFinder	547684-547715	32	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55716-55747	5	0.844
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	MH510275	Myoviridae sp. isolate ctgg12, complete genome	10574-10600	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	117025-117051	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP047439	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence	16669-16695	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP047440	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence	26029-26055	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP047427	Spiroplasma citri strain C189 plasmid pScpC189-1, complete sequence	17939-17965	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP053310	Spiroplasma citri strain C5 plasmid pScpC5-6, complete sequence	35696-35722	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_015427	Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence	533-559	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP047431	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-3, complete sequence	30512-30538	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP046369	Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence	50368-50394	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP042474	Spiroplasma citri strain CC-2 plasmid pScpCC2-2, complete sequence	10831-10857	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	4949-4975	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	KJ018210	Flavobacterium sp. phage 1/32, complete genome	2659-2685	5	0.815
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	LN681537	Clostridium phage phiCD211, complete genome	13811-13837	5	0.815
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP031397	Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence	35108-35140	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP019854	Borreliella burgdorferi plasmid lp54, complete sequence	35010-35042	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP019765	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence	35010-35042	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_011784	Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence	34982-35014	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_013130	Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence	35020-35052	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_013128	Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence	32770-32802	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_013129	Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence	34961-34993	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_001857	Borreliella burgdorferi B31 plasmid lp54, complete sequence	35010-35042	5	0.848
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP017218	Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence	18753-18785	5	0.848
CP025200_1	1.36\|546829\|33\|CP025200\|CRISPRCasFinder	546829-546861	33	CP001771	Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence	36684-36716	6	0.818
CP025200_1	1.65\|546951\|33\|CP025200\|CRT	546951-546983	33	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55715-55747	6	0.818
CP025200_1	1.74\|547500\|33\|CP025200\|CRT	547500-547532	33	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55715-55747	6	0.818
CP025200_1	1.77\|547683\|33\|CP025200\|CRT	547683-547715	33	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55715-55747	6	0.818
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP038620	Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence	99280-99306	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP038614	Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence	97698-97724	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP038614	Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence	221288-221314	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	714771-714797	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	34309-34335	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	16601-16627	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	133403-133429	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP038617	Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence	9284-9310	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	165797-165823	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	170022-170048	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	157683-157709	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	168278-168304	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	130962-130988	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	125694-125720	6	0.778
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	MG883728	Microviridae sp. isolate Flamingo05, partial genome	430-456	6	0.778
CP025200_1	1.9\|546827\|35\|CP025200\|PILER-CR	546827-546861	35	CP001771	Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence	36682-36716	7	0.8
CP025200_1	1.11\|546950\|34\|CP025200\|PILER-CR	546950-546983	34	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55714-55747	7	0.794
CP025200_1	1.20\|547499\|34\|CP025200\|PILER-CR	547499-547532	34	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55714-55747	7	0.794
CP025200_1	1.23\|547682\|34\|CP025200\|PILER-CR	547682-547715	34	NZ_CP010581	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence	55714-55747	7	0.794
CP025200_1	1.35\|546768\|32\|CP025200\|CRISPRCasFinder	546768-546799	32	MK813939	Aeromonas phage 4_L372D, complete genome	73908-73939	7	0.781
CP025200_1	1.35\|546768\|32\|CP025200\|CRISPRCasFinder	546768-546799	32	MK804893	Aeromonas phage 2-L372D, complete genome	63768-63799	7	0.781
CP025200_1	1.35\|546768\|32\|CP025200\|CRISPRCasFinder	546768-546799	32	NC_048770	Aeromonas phage 2_L372X, complete genome	59715-59746	7	0.781
CP025200_1	1.35\|546768\|32\|CP025200\|CRISPRCasFinder	546768-546799	32	MK813941	Aeromonas phage 4_L372XY, complete genome	60854-60885	7	0.781
CP025200_1	1.36\|546829\|33\|CP025200\|CRISPRCasFinder	546829-546861	33	MN694597	Marine virus AFVG_250M99, complete genome	22275-22307	7	0.788
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	NZ_LR215002	Mycoplasma conjunctivae strain NCTC10147 plasmid 6	4689-4720	7	0.781
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	LR214958	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4	479-510	7	0.781
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	1848-1879	7	0.781
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	10850-10881	7	0.781
CP025200_1	1.49\|547623\|32\|CP025200\|CRISPRCasFinder	547623-547654	32	MN693011	Marine virus AFVG_117M58, complete genome	50590-50621	7	0.781
CP025200_1	1.52\|547806\|32\|CP025200\|CRISPRCasFinder	547806-547837	32	MN693011	Marine virus AFVG_117M58, complete genome	50590-50621	7	0.781
CP025200_1	1.63\|546828\|34\|CP025200\|CRT	546828-546861	34	CP001771	Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence	36683-36716	7	0.794
CP025200_1	1.71\|547317\|33\|CP025200\|CRT	547317-547349	33	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	10849-10881	7	0.788
CP025200_1	1.71\|547317\|33\|CP025200\|CRT	547317-547349	33	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	1848-1880	7	0.788
CP025200_1	1.71\|547317\|33\|CP025200\|CRT	547317-547349	33	NZ_LR215002	Mycoplasma conjunctivae strain NCTC10147 plasmid 6	4689-4721	7	0.788
CP025200_1	1.71\|547317\|33\|CP025200\|CRT	547317-547349	33	LR214958	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4	479-511	7	0.788
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	NC_010901	Lactococcus lactis plasmid pNP40, complete sequence	37525-37551	7	0.741
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	30767-30799	7	0.788
CP025200_2	2.15\|558332\|33\|CP025200\|CRISPRCasFinder	558332-558364	33	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	202324-202356	7	0.788
CP025200_1	1.17\|547316\|34\|CP025200\|PILER-CR	547316-547349	34	NZ_LR215002	Mycoplasma conjunctivae strain NCTC10147 plasmid 6	4689-4722	8	0.765
CP025200_1	1.17\|547316\|34\|CP025200\|PILER-CR	547316-547349	34	LR214958	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4	479-512	8	0.765
CP025200_1	1.17\|547316\|34\|CP025200\|PILER-CR	547316-547349	34	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	1848-1881	8	0.765
CP025200_1	1.17\|547316\|34\|CP025200\|PILER-CR	547316-547349	34	LR214961	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7	10848-10881	8	0.765
CP025200_1	1.28\|546339\|32\|CP025200\|CRISPRCasFinder	546339-546370	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	173599-173630	8	0.75
CP025200_1	1.28\|546339\|32\|CP025200\|CRISPRCasFinder	546339-546370	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	65066-65097	8	0.75
CP025200_1	1.28\|546339\|32\|CP025200\|CRISPRCasFinder	546339-546370	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	109062-109093	8	0.75
CP025200_1	1.28\|546339\|32\|CP025200\|CRISPRCasFinder	546339-546370	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	52005-52036	8	0.75
CP025200_1	1.28\|546339\|32\|CP025200\|CRISPRCasFinder	546339-546370	32	NC_010179	Lactobacillus johnsonii prophage Lj771, complete genome	21327-21358	8	0.75
CP025200_1	1.30\|546461\|32\|CP025200\|CRISPRCasFinder	546461-546492	32	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	36918-36949	8	0.75
CP025200_1	1.42\|547196\|32\|CP025200\|CRISPRCasFinder	547196-547227	32	MN694499	Marine virus AFVG_250M606, complete genome	17161-17192	8	0.75
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	262568-262599	8	0.75
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP020746	Bacillus mycoides strain Gnyt1 plasmid unnamed3, complete sequence	8621-8652	8	0.75
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NC_016658	Cyanophage NATL1A-7, complete genome	33006-33037	8	0.75
CP025200_1	1.53\|547867\|32\|CP025200\|CRISPRCasFinder	547867-547898	32	MN693620	Marine virus AFVG_250M617, complete genome	22801-22832	8	0.75
CP025200_1	1.55\|546338\|33\|CP025200\|CRT	546338-546370	33	NC_010179	Lactobacillus johnsonii prophage Lj771, complete genome	21326-21358	8	0.758
CP025200_1	1.63\|546828\|34\|CP025200\|CRT	546828-546861	34	MN694597	Marine virus AFVG_250M99, complete genome	22274-22307	8	0.765
CP025200_2	2.1\|557609\|27\|CP025200\|PILER-CR	557609-557635	27	MK448903	Streptococcus phage Javan310, complete genome	1192-1218	8	0.704
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_015919	Borreliella bissettii DN127 plasmid lp54, complete sequence	35047-35079	8	0.758
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP015809	Borrelia mayonii strain MN14-1539 plasmid lp54	35437-35469	8	0.758
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP015795	Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence	35453-35485	8	0.758
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_006129	Borreliella bavariensis PBi plasmid lp54, complete sequence	35548-35580	8	0.758
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP009119	Borreliella valaisiana Tom4006 plasmid lp54, complete sequence	18894-18926	8	0.758
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	20098-20130	8	0.758
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	109062-109095	9	0.735
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	127758-127791	9	0.735
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	173597-173630	9	0.735
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	65064-65097	9	0.735
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	52003-52036	9	0.735
CP025200_1	1.1\|546337\|34\|CP025200\|PILER-CR	546337-546370	34	NC_010179	Lactobacillus johnsonii prophage Lj771, complete genome	21325-21358	9	0.735
CP025200_1	1.9\|546827\|35\|CP025200\|PILER-CR	546827-546861	35	MN694597	Marine virus AFVG_250M99, complete genome	22273-22307	9	0.743
CP025200_1	1.29\|546400\|32\|CP025200\|CRISPRCasFinder	546400-546431	32	NZ_CP039693	Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence	271961-271992	9	0.719
CP025200_1	1.38\|546952\|32\|CP025200\|CRISPRCasFinder	546952-546983	32	MN830253	Lactobacillus phage JNU_P5, complete genome	40528-40559	9	0.719
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	NC_001884	Bacillus phage SPBc2, complete genome	65277-65308	9	0.719
CP025200_1	1.44\|547318\|32\|CP025200\|CRISPRCasFinder	547318-547349	32	AF020713	Bacteriophage SPBc2 complete genome	65277-65308	9	0.719
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NC_017236	Borreliella afzelii PKo plasmid lp28-8, complete sequence	14597-14628	9	0.719
CP025200_1	1.47\|547501\|32\|CP025200\|CRISPRCasFinder	547501-547532	32	MN830253	Lactobacillus phage JNU_P5, complete genome	40528-40559	9	0.719
CP025200_1	1.49\|547623\|32\|CP025200\|CRISPRCasFinder	547623-547654	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244623	9	0.719
CP025200_1	1.49\|547623\|32\|CP025200\|CRISPRCasFinder	547623-547654	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196896-196927	9	0.719
CP025200_1	1.49\|547623\|32\|CP025200\|CRISPRCasFinder	547623-547654	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225346	9	0.719
CP025200_1	1.50\|547684\|32\|CP025200\|CRISPRCasFinder	547684-547715	32	MN830253	Lactobacillus phage JNU_P5, complete genome	40528-40559	9	0.719
CP025200_1	1.52\|547806\|32\|CP025200\|CRISPRCasFinder	547806-547837	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244623	9	0.719
CP025200_1	1.52\|547806\|32\|CP025200\|CRISPRCasFinder	547806-547837	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196896-196927	9	0.719
CP025200_1	1.52\|547806\|32\|CP025200\|CRISPRCasFinder	547806-547837	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225346	9	0.719
CP025200_1	1.55\|546338\|33\|CP025200\|CRT	546338-546370	33	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	173598-173630	9	0.727
CP025200_1	1.55\|546338\|33\|CP025200\|CRT	546338-546370	33	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	65065-65097	9	0.727
CP025200_1	1.55\|546338\|33\|CP025200\|CRT	546338-546370	33	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	109062-109094	9	0.727
CP025200_1	1.55\|546338\|33\|CP025200\|CRT	546338-546370	33	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	52004-52036	9	0.727
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP042473	Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence	14106-14138	9	0.727
CP025200_2	2.14\|558271\|33\|CP025200\|CRISPRCasFinder,CRT	558271-558303	33	MN497415	Vibrio phage vB_VhaM_VH-8, complete genome	18133-18165	9	0.727
CP025200_2	2.15\|558332\|33\|CP025200\|CRISPRCasFinder	558332-558364	33	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	364031-364063	9	0.727
CP025200_1	1.12\|547011\|34\|CP025200\|PILER-CR	547011-547044	34	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6003-6036	10	0.706
CP025200_1	1.21\|547560\|34\|CP025200\|PILER-CR	547560-547593	34	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6003-6036	10	0.706
CP025200_1	1.24\|547743\|34\|CP025200\|PILER-CR	547743-547776	34	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6003-6036	10	0.706
CP025200_1	1.35\|546768\|32\|CP025200\|CRISPRCasFinder	546768-546799	32	NZ_CP014964	Geobacter anodireducens strain SD-1 plasmid pSD, complete sequence	1679-1710	10	0.688
CP025200_1	1.41\|547135\|32\|CP025200\|CRISPRCasFinder	547135-547166	32	NZ_KY296096	Pseudomonas aeruginosa strain 14057 plasmid p14057-tetA, complete sequence	18600-18631	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_AP023193	Escherichia coli strain TUM18530 plasmid pMTY18530-3_incFll, complete sequence	72719-72750	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	129061-129092	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	68858-68889	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP017847	Escherichia coli strain FMU073332 plasmid pEcoFMU073332c, complete sequence	44986-45017	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP028430	Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence	53393-53424	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NC_011917	Escherichia coli LF82 plasmid plLF82, complete sequence	67467-67498	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	77036-77067	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	67762-67793	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	44180-44211	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP053233	Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence	71888-71919	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	60492-60523	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	21390-21421	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	21367-21398	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	18910-18941	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	21391-21422	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	21391-21422	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	68921-68952	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	38026-38057	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP033097	Escherichia coli strain CP53 plasmid pCP53-113k, complete sequence	73948-73979	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP040876	Enterococcus faecium strain DB-1 plasmid punnamed2	58766-58797	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP028433	Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence	77122-77153	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	33108-33139	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	74544-74575	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	167-198	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	45124-45155	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	53000-53031	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_AP023200	Escherichia coli strain TUM18780 plasmid pMTY18780-3, complete sequence	72719-72750	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	42764-42795	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_MG205641	Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence	35871-35902	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	28830-28861	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_MG904996	Escherichia coli strain 15OD0495 plasmid p15ODDR, complete sequence	96467-96498	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	NZ_MG205642	Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence	35871-35902	10	0.688
CP025200_1	1.46\|547440\|32\|CP025200\|CRISPRCasFinder	547440-547471	32	CP054387	Escherichia phage CMS-2020a, complete genome	67499-67530	10	0.688
CP025200_1	1.66\|547012\|33\|CP025200\|CRT	547012-547044	33	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6004-6036	10	0.697
CP025200_1	1.75\|547561\|33\|CP025200\|CRT	547561-547593	33	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6004-6036	10	0.697
CP025200_1	1.76\|547622\|33\|CP025200\|CRT	547622-547654	33	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244624	10	0.697
CP025200_1	1.76\|547622\|33\|CP025200\|CRT	547622-547654	33	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225347	10	0.697
CP025200_1	1.76\|547622\|33\|CP025200\|CRT	547622-547654	33	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196895-196927	10	0.697
CP025200_1	1.78\|547744\|33\|CP025200\|CRT	547744-547776	33	NC_011409	Haemophilus influenzae plasmid ICEhin1056, complete sequence	6004-6036	10	0.697
CP025200_1	1.79\|547805\|33\|CP025200\|CRT	547805-547837	33	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244624	10	0.697
CP025200_1	1.79\|547805\|33\|CP025200\|CRT	547805-547837	33	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225347	10	0.697
CP025200_1	1.79\|547805\|33\|CP025200\|CRT	547805-547837	33	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196895-196927	10	0.697
CP025200_2	2.3\|557600\|33\|CP025200\|CRISPRCasFinder,CRT	557600-557632	33	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	62807-62839	10	0.697
CP025200_1	1.22\|547621\|34\|CP025200\|PILER-CR	547621-547654	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244625	11	0.676
CP025200_1	1.22\|547621\|34\|CP025200\|PILER-CR	547621-547654	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225348	11	0.676
CP025200_1	1.22\|547621\|34\|CP025200\|PILER-CR	547621-547654	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196894-196927	11	0.676
CP025200_1	1.25\|547804\|34\|CP025200\|PILER-CR	547804-547837	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	244592-244625	11	0.676
CP025200_1	1.25\|547804\|34\|CP025200\|PILER-CR	547804-547837	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	225315-225348	11	0.676
CP025200_1	1.25\|547804\|34\|CP025200\|PILER-CR	547804-547837	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	196894-196927	11	0.676
CP025200_1	1.37\|546891\|32\|CP025200\|CRISPRCasFinder	546891-546922	32	CP053577	Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence	190940-190971	11	0.656
CP025200_1	1.37\|546891\|32\|CP025200\|CRISPRCasFinder	546891-546922	32	NZ_CP024166	Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_01, complete sequence	56985-57016	11	0.656

1. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

2. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

3. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

4. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

5. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

6. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

7. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

8. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

9. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

10. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

11. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_006129 (Borreliella bavariensis PBi plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tgatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

12. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

13. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP009119 (Borreliella valaisiana Tom4006 plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttatattttttttatttgttgtttcaa	Protospacer
*.******** ****** *********

14. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
taatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

15. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 3, identity: 0.889

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tgatattttttttatttattgtttcaa	Protospacer
* ******** ****** *********

16. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttatatttttgttatttcctgttgcag	Protospacer
*.****************.**** **.

17. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP042473 (Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence) position: , mismatch: 4, identity: 0.852

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttttatttttattatttgttgtttcaa	Protospacer
*. *******.****** *********

18. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 4, identity: 0.852

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tgttatttttgttattttttatttcaa	Protospacer
*  **************.**.******

19. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 4, identity: 0.852

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tgatattttttttatttattgtttcga	Protospacer
* ******** ****** *******.*

20. spacer 2.1|557609|27|CP025200|PILER-CR matches to CP020758 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-19, complete sequence) position: , mismatch: 4, identity: 0.852

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tgaaatttttattatttcttctttcaa	Protospacer
* * ******.********* ******

21. spacer 1.38|546952|32|CP025200|CRISPRCasFinder matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 5, identity: 0.844

ggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
ggggaaagttagtattaaatagccct--attatt	Protospacer
******** ******.********.*  ****

22. spacer 1.47|547501|32|CP025200|CRISPRCasFinder matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 5, identity: 0.844

ggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
ggggaaagttagtattaaatagccct--attatt	Protospacer
******** ******.********.*  ****

23. spacer 1.50|547684|32|CP025200|CRISPRCasFinder matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 5, identity: 0.844

ggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
ggggaaagttagtattaaatagccct--attatt	Protospacer
******** ******.********.*  ****

24. spacer 2.1|557609|27|CP025200|PILER-CR matches to MH510275 (Myoviridae sp. isolate ctgg12, complete genome) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
aaatatttttgttgtttcttgtttaat	Protospacer
  ***********.********** *

25. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
gcatatttttgatatttcttctttata	Protospacer
 ********** ******** ***  *

26. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP047439 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

27. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP047440 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

28. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP047427 (Spiroplasma citri strain C189 plasmid pScpC189-1, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

29. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP053310 (Spiroplasma citri strain C5 plasmid pScpC5-6, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

30. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tattagttttattatttcttgtttcat	Protospacer
*  ** ****.***************

31. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP047431 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-3, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

32. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP046369 (Spiroplasma citri strain BR12 plasmid pScpBR12-1, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

33. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP042474 (Spiroplasma citri strain CC-2 plasmid pScpCC2-2, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
agacatttttattatttattgtttcaa	Protospacer
  *.******.****** *********

34. spacer 2.1|557609|27|CP025200|PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
gcatatttttgatatttcttctttata	Protospacer
 ********** ******** ***  *

35. spacer 2.1|557609|27|CP025200|PILER-CR matches to KJ018210 (Flavobacterium sp. phage 1/32, complete genome) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tcatttttttgttttttcttgttctta	Protospacer
**** ******** *********.. *

36. spacer 2.1|557609|27|CP025200|PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 5, identity: 0.815

tcatatttttgttatttcttgtttcaa	CRISPR spacer
gcatatttttgatatttcttctttata	Protospacer
 ********** ******** ***  *

37. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

38. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

39. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

40. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

41. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

42. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

43. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

44. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

45. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 5, identity: 0.848

tcatatttttgttatttcttgtttcaagtcgac--	CRISPR spacer
taatattttttttatttattgtttcaa--cgacat	Protospacer
* ******** ****** *********  ****

46. spacer 1.36|546829|33|CP025200|CRISPRCasFinder matches to CP001771 (Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence) position: , mismatch: 6, identity: 0.818

cattggtctgctgatgtagctttagttgctata	CRISPR spacer
cactggtctgctgatgtagcttcagttctgcta	Protospacer
**.*******************.**** .  **

47. spacer 1.65|546951|33|CP025200|CRT matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 6, identity: 0.818

tggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
aggggaaagttagtattaaatagccct--attatt	Protospacer
 ******** ******.********.*  ****

48. spacer 1.74|547500|33|CP025200|CRT matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 6, identity: 0.818

tggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
aggggaaagttagtattaaatagccct--attatt	Protospacer
 ******** ******.********.*  ****

49. spacer 1.77|547683|33|CP025200|CRT matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 6, identity: 0.818

tggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
aggggaaagttagtattaaatagccct--attatt	Protospacer
 ******** ******.********.*  ****

50. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP038620 (Arsenophonus nasoniae strain FIN plasmid pArsFIN8, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttgaggttttgttattttttgtttcaa	Protospacer
*.. . ***********.*********

51. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttgaggttttgttattttttgtttcaa	Protospacer
*.. . ***********.*********

52. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttgagattttgttattttttgtttcaa	Protospacer
*.. . ***********.*********

53. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

54. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

55. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

56. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

57. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ttgaggttttgttattttttgtttcaa	Protospacer
*.. . ***********.*********

58. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

59. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

60. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

61. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

62. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

63. spacer 2.1|557609|27|CP025200|PILER-CR matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
tataattttttttatttcttgtttctg	Protospacer
*   ****** ************** .

64. spacer 2.1|557609|27|CP025200|PILER-CR matches to MG883728 (Microviridae sp. isolate Flamingo05, partial genome) position: , mismatch: 6, identity: 0.778

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ccatatttttattatttcttcttttgg	Protospacer
.*********.********* ***...

65. spacer 1.9|546827|35|CP025200|PILER-CR matches to CP001771 (Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence) position: , mismatch: 7, identity: 0.8

cccattggtctgctgatgtagctttagttgctata	CRISPR spacer
ctcactggtctgctgatgtagcttcagttctgcta	Protospacer
*.**.*******************.**** .  **

66. spacer 1.11|546950|34|CP025200|PILER-CR matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 7, identity: 0.794

ctggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
gaggggaaagttagtattaaatagccct--attatt	Protospacer
  ******** ******.********.*  ****

67. spacer 1.20|547499|34|CP025200|PILER-CR matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 7, identity: 0.794

ctggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
gaggggaaagttagtattaaatagccct--attatt	Protospacer
  ******** ******.********.*  ****

68. spacer 1.23|547682|34|CP025200|PILER-CR matches to NZ_CP010581 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB68, complete sequence) position: , mismatch: 7, identity: 0.794

ctggggaaagatagtatcaaatagccttcaatta--	CRISPR spacer
gaggggaaagttagtattaaatagccct--attatt	Protospacer
  ******** ******.********.*  ****

69. spacer 1.35|546768|32|CP025200|CRISPRCasFinder matches to MK813939 (Aeromonas phage 4_L372D, complete genome) position: , mismatch: 7, identity: 0.781

acaccgcaaagaagtacttgaacaagcaaacg	CRISPR spacer
accgctgaaagaagaacttgaaaaagcaaaag	Protospacer
**  *  ******* ******* ******* *

70. spacer 1.35|546768|32|CP025200|CRISPRCasFinder matches to MK804893 (Aeromonas phage 2-L372D, complete genome) position: , mismatch: 7, identity: 0.781

acaccgcaaagaagtacttgaacaagcaaacg	CRISPR spacer
accgctgaaagaagaacttgaaaaagcaaaag	Protospacer
**  *  ******* ******* ******* *

71. spacer 1.35|546768|32|CP025200|CRISPRCasFinder matches to NC_048770 (Aeromonas phage 2_L372X, complete genome) position: , mismatch: 7, identity: 0.781

acaccgcaaagaagtacttgaacaagcaaacg	CRISPR spacer
accgctgaaagaagaacttgaaaaagcaaaag	Protospacer
**  *  ******* ******* ******* *

72. spacer 1.35|546768|32|CP025200|CRISPRCasFinder matches to MK813941 (Aeromonas phage 4_L372XY, complete genome) position: , mismatch: 7, identity: 0.781

acaccgcaaagaagtacttgaacaagcaaacg	CRISPR spacer
accgctgaaagaagaacttgaaaaagcaaaag	Protospacer
**  *  ******* ******* ******* *

73. spacer 1.36|546829|33|CP025200|CRISPRCasFinder matches to MN694597 (Marine virus AFVG_250M99, complete genome) position: , mismatch: 7, identity: 0.788

cattggtctgctgatgtagctttagttgctata	CRISPR spacer
aattggtctgctgatttagctttagttccctct	Protospacer
 ************** *********** *. .

74. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to NZ_LR215002 (Mycoplasma conjunctivae strain NCTC10147 plasmid 6) position: , mismatch: 7, identity: 0.781

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
gaacaactaaaatatctggataattactttct	Protospacer
.**********.********* *** ..* **

75. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to LR214958 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4) position: , mismatch: 7, identity: 0.781

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
gaacaactaaaatatctggataattactttct	Protospacer
.**********.********* *** ..* **

76. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 7, identity: 0.781

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
gaacaactaaaatatctggataattactttct	Protospacer
.**********.********* *** ..* **

77. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 7, identity: 0.781

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
gaacaactaaaatatctggataattactttct	Protospacer
.**********.********* *** ..* **

78. spacer 1.49|547623|32|CP025200|CRISPRCasFinder matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 7, identity: 0.781

acattattgttcaatattgacattacaagctt	CRISPR spacer
acattattgtctaatattgacatcgcagtctc	Protospacer
**********..***********..**. **.

79. spacer 1.52|547806|32|CP025200|CRISPRCasFinder matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 7, identity: 0.781

acattattgttcaatattgacattacaagctt	CRISPR spacer
acattattgtctaatattgacatcgcagtctc	Protospacer
**********..***********..**. **.

80. spacer 1.63|546828|34|CP025200|CRT matches to CP001771 (Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequence) position: , mismatch: 7, identity: 0.794

ccattggtctgctgatgtagctttagttgctata	CRISPR spacer
tcactggtctgctgatgtagcttcagttctgcta	Protospacer
.**.*******************.**** .  **

81. spacer 1.71|547317|33|CP025200|CRT matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 7, identity: 0.788

taaacaactaaagtatctggatcattttctgct	CRISPR spacer
tgaacaactaaaatatctggataattactttct	Protospacer
*.**********.********* *** ..* **

82. spacer 1.71|547317|33|CP025200|CRT matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 7, identity: 0.788

taaacaactaaagtatctggatcattttctgct	CRISPR spacer
tgaacaactaaaatatctggataattactttct	Protospacer
*.**********.********* *** ..* **

83. spacer 1.71|547317|33|CP025200|CRT matches to NZ_LR215002 (Mycoplasma conjunctivae strain NCTC10147 plasmid 6) position: , mismatch: 7, identity: 0.788

taaacaactaaagtatctggatcattttctgct	CRISPR spacer
tgaacaactaaaatatctggataattactttct	Protospacer
*.**********.********* *** ..* **

84. spacer 1.71|547317|33|CP025200|CRT matches to LR214958 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4) position: , mismatch: 7, identity: 0.788

taaacaactaaagtatctggatcattttctgct	CRISPR spacer
tgaacaactaaaatatctggataattactttct	Protospacer
*.**********.********* *** ..* **

85. spacer 2.1|557609|27|CP025200|PILER-CR matches to NC_010901 (Lactococcus lactis plasmid pNP40, complete sequence) position: , mismatch: 7, identity: 0.741

tcatatttttgttatttcttgtttcaa	CRISPR spacer
gtttaattttgttatttcttgtttttt	Protospacer
 . ** ******************.

86. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 7, identity: 0.788

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
tgttatttttgttattttttatttcaattaaac	Protospacer
*  **************.**.****** * .**

87. spacer 2.15|558332|33|CP025200|CRISPRCasFinder matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 7, identity: 0.788

tgaagcacaatatttttaaaataattgggcaag--	CRISPR spacer
cggagcacaatttttttaaaataaat--gcaattt	Protospacer
.*.******** ************ *  ****

88. spacer 1.17|547316|34|CP025200|PILER-CR matches to NZ_LR215002 (Mycoplasma conjunctivae strain NCTC10147 plasmid 6) position: , mismatch: 8, identity: 0.765

ctaaacaactaaagtatctggatcattttctgct	CRISPR spacer
gtgaacaactaaaatatctggataattactttct	Protospacer
 *.**********.********* *** ..* **

89. spacer 1.17|547316|34|CP025200|PILER-CR matches to LR214958 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 4) position: , mismatch: 8, identity: 0.765

ctaaacaactaaagtatctggatcattttctgct	CRISPR spacer
gtgaacaactaaaatatctggataattactttct	Protospacer
 *.**********.********* *** ..* **

90. spacer 1.17|547316|34|CP025200|PILER-CR matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 8, identity: 0.765

ctaaacaactaaagtatctggatcattttctgct	CRISPR spacer
gtgaacaactaaaatatctggataattactttct	Protospacer
 *.**********.********* *** ..* **

91. spacer 1.17|547316|34|CP025200|PILER-CR matches to LR214961 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 7) position: , mismatch: 8, identity: 0.765

ctaaacaactaaagtatctggatcattttctgct	CRISPR spacer
gtgaacaactaaaatatctggataattactttct	Protospacer
 *.**********.********* *** ..* **

92. spacer 1.28|546339|32|CP025200|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 8, identity: 0.75

gatgatgatagtaatttatctggactagttaa	CRISPR spacer
gctaatgatagtaatttttgtggactagcatt	Protospacer
* *.************* * ********.

93. spacer 1.28|546339|32|CP025200|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatgatgatagtaatttatctggactagttaa	CRISPR spacer
gctaatgatagtaatttttgtggactagcatt	Protospacer
* *.************* * ********.

94. spacer 1.28|546339|32|CP025200|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.75

gatgatgatagtaatttatctggactagttaa	CRISPR spacer
gctaatgatagtaatttttgtggactagcatt	Protospacer
* *.************* * ********.

95. spacer 1.28|546339|32|CP025200|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.75

gatgatgatagtaatttatctggactagttaa	CRISPR spacer
gctaatgatagtaatttttgtggactagcatt	Protospacer
* *.************* * ********.

96. spacer 1.28|546339|32|CP025200|CRISPRCasFinder matches to NC_010179 (Lactobacillus johnsonii prophage Lj771, complete genome) position: , mismatch: 8, identity: 0.75

gatgatgatagtaatttatctggactagttaa	CRISPR spacer
gatgatgatggtaatttaactggcttggacga	Protospacer
*********.******** **** .*.* ..*

97. spacer 1.30|546461|32|CP025200|CRISPRCasFinder matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatttgtcaacgactaccacaaatgtgagac	CRISPR spacer
aaatttatcaacaactaccacaacctattgac	Protospacer
******.*****.********** .    ***

98. spacer 1.42|547196|32|CP025200|CRISPRCasFinder matches to MN694499 (Marine virus AFVG_250M606, complete genome) position: , mismatch: 8, identity: 0.75

gtcataaattagctttctgcccttttgcgtcc	CRISPR spacer
atcataaattagttttcttcccttcattgtct	Protospacer
.***********.***** *****.  .***.

99. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gactacgatattttcttttaattatatcttgg	CRISPR spacer
cattcggatactttcttttaattacatctaag	Protospacer
 *.*  ****.*************.**** .*

100. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP020746 (Bacillus mycoides strain Gnyt1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gactacgatattttcttttaattatatcttgg	CRISPR spacer
gagctgcatatttccttttaataatatctttg	Protospacer
** .   ******.******** ******* *

101. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NC_016658 (Cyanophage NATL1A-7, complete genome) position: , mismatch: 8, identity: 0.75

gactacgatattttcttttaattatatcttgg	CRISPR spacer
atcaacaatattttcttttaattttatatcag	Protospacer
. * **.**************** *** *..*

102. spacer 1.53|547867|32|CP025200|CRISPRCasFinder matches to MN693620 (Marine virus AFVG_250M617, complete genome) position: , mismatch: 8, identity: 0.75

caccaatgcctgaaaggaaactacctacacca	CRISPR spacer
tatctagacctgaaaagaaaccacctacacct	Protospacer
.*.* * .*******.*****.*********

103. spacer 1.55|546338|33|CP025200|CRT matches to NC_010179 (Lactobacillus johnsonii prophage Lj771, complete genome) position: , mismatch: 8, identity: 0.758

tgatgatgatagtaatttatctggactagttaa	CRISPR spacer
tgatgatgatggtaatttaactggcttggacga	Protospacer
**********.******** **** .*.* ..*

104. spacer 1.63|546828|34|CP025200|CRT matches to MN694597 (Marine virus AFVG_250M99, complete genome) position: , mismatch: 8, identity: 0.765

ccattggtctgctgatgtagctttagttgctata	CRISPR spacer
taattggtctgctgatttagctttagttccctct	Protospacer
. ************** *********** *. .

105. spacer 2.1|557609|27|CP025200|PILER-CR matches to MK448903 (Streptococcus phage Javan310, complete genome) position: , mismatch: 8, identity: 0.704

tcatatttttgttatttcttgtttcaa	CRISPR spacer
ggggatttttgttatttcttgttaatt	Protospacer
  . *******************

106. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
taatattttttttatttattgtttcaacaacat	Protospacer
* ******** ****** *********    *.

107. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
taatattttttttatttattgtttcaacaacat	Protospacer
* ******** ****** *********    *.

108. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
taatattttttttatttattgtttcaacaacat	Protospacer
* ******** ****** *********    *.

109. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_006129 (Borreliella bavariensis PBi plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
tgatattttttttatttattgtttcaataatat	Protospacer
* ******** ****** *********    *.

110. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP009119 (Borreliella valaisiana Tom4006 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
ttatattttttttatttgttgtttcaacaacat	Protospacer
*.******** ****** *********    *.

111. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.758

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
tgatattttttttatttattgtttcaacaatat	Protospacer
* ******** ****** *********    *.

112. spacer 1.1|546337|34|CP025200|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
cagctaatgatagtaatttttgtggactagcatt	Protospacer
* * *.************* * ********.

113. spacer 1.1|546337|34|CP025200|PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
cttatgatgatagaaatttatctgacaatataaa	Protospacer
** ********** **********.    .* **

114. spacer 1.1|546337|34|CP025200|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
cagctaatgatagtaatttttgtggactagcatt	Protospacer
* * *.************* * ********.

115. spacer 1.1|546337|34|CP025200|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
cagctaatgatagtaatttttgtggactagcatt	Protospacer
* * *.************* * ********.

116. spacer 1.1|546337|34|CP025200|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
cagctaatgatagtaatttttgtggactagcatt	Protospacer
* * *.************* * ********.

117. spacer 1.1|546337|34|CP025200|PILER-CR matches to NC_010179 (Lactobacillus johnsonii prophage Lj771, complete genome) position: , mismatch: 9, identity: 0.735

ctgatgatgatagtaatttatctggactagttaa	CRISPR spacer
ttgatgatgatggtaatttaactggcttggacga	Protospacer
.**********.******** **** .*.* ..*

118. spacer 1.9|546827|35|CP025200|PILER-CR matches to MN694597 (Marine virus AFVG_250M99, complete genome) position: , mismatch: 9, identity: 0.743

cccattggtctgctgatgtagctttagttgctata	CRISPR spacer
ataattggtctgctgatttagctttagttccctct	Protospacer
 . ************** *********** *. .

119. spacer 1.29|546400|32|CP025200|CRISPRCasFinder matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 9, identity: 0.719

gattttgctgcaggaatcggctttggcggtgc	CRISPR spacer
gtctacgctgcaggaatctgcgttggcggcaa	Protospacer
* .* .************ ** *******..

120. spacer 1.38|546952|32|CP025200|CRISPRCasFinder matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 9, identity: 0.719

ggggaaagatagtatcaaatagccttcaatta	CRISPR spacer
ctagaaagaaagtatcaaaaagccttaactct	Protospacer
  .****** ********* ****** * *.

121. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 9, identity: 0.719

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
cagcaattaaagtctctggatcatttaatatc	Protospacer
 *.***.****** ************  *...

122. spacer 1.44|547318|32|CP025200|CRISPRCasFinder matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 9, identity: 0.719

aaacaactaaagtatctggatcattttctgct	CRISPR spacer
cagcaattaaagtctctggatcatttaatatc	Protospacer
 *.***.****** ************  *...

123. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NC_017236 (Borreliella afzelii PKo plasmid lp28-8, complete sequence) position: , mismatch: 9, identity: 0.719

gactacgatattttcttttaattatatcttgg	CRISPR spacer
atttataatatttttttttaattttatctttt	Protospacer
. .**..*******.******** ******

124. spacer 1.47|547501|32|CP025200|CRISPRCasFinder matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 9, identity: 0.719

ggggaaagatagtatcaaatagccttcaatta	CRISPR spacer
ctagaaagaaagtatcaaaaagccttaactct	Protospacer
  .****** ********* ****** * *.

125. spacer 1.49|547623|32|CP025200|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

126. spacer 1.49|547623|32|CP025200|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

127. spacer 1.49|547623|32|CP025200|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

128. spacer 1.50|547684|32|CP025200|CRISPRCasFinder matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 9, identity: 0.719

ggggaaagatagtatcaaatagccttcaatta	CRISPR spacer
ctagaaagaaagtatcaaaaagccttaactct	Protospacer
  .****** ********* ****** * *.

129. spacer 1.52|547806|32|CP025200|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

130. spacer 1.52|547806|32|CP025200|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

131. spacer 1.52|547806|32|CP025200|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.719

acattattgttcaatattgacattacaagctt	CRISPR spacer
tttttattgttctatattaacattacattaat	Protospacer
 . ********* *****.********    *

132. spacer 1.55|546338|33|CP025200|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 9, identity: 0.727

tgatgatgatagtaatttatctggactagttaa	CRISPR spacer
agctaatgatagtaatttttgtggactagcatt	Protospacer
 * *.************* * ********.

133. spacer 1.55|546338|33|CP025200|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.727

tgatgatgatagtaatttatctggactagttaa	CRISPR spacer
agctaatgatagtaatttttgtggactagcatt	Protospacer
 * *.************* * ********.

134. spacer 1.55|546338|33|CP025200|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.727

tgatgatgatagtaatttatctggactagttaa	CRISPR spacer
agctaatgatagtaatttttgtggactagcatt	Protospacer
 * *.************* * ********.

135. spacer 1.55|546338|33|CP025200|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.727

tgatgatgatagtaatttatctggactagttaa	CRISPR spacer
agctaatgatagtaatttttgtggactagcatt	Protospacer
 * *.************* * ********.

136. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP042473 (Spiroplasma citri strain CC-2 plasmid pScpCC2-1, complete sequence) position: , mismatch: 9, identity: 0.727

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
ttttatttttattatttgttgtttcaaatttcg	Protospacer
*. *******.****** *********.*.

137. spacer 2.14|558271|33|CP025200|CRISPRCasFinder,CRT matches to MN497415 (Vibrio phage vB_VhaM_VH-8, complete genome) position: , mismatch: 9, identity: 0.727

tcgatggtaactctgtagcttttagagcctttt	CRISPR spacer
tttaatataactccgtagctttgagagccttgc	Protospacer
*. *  .******.******** ******** .

138. spacer 2.15|558332|33|CP025200|CRISPRCasFinder matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.727

tgaagcacaatatttttaaaataattgggcaag	CRISPR spacer
ggaagcacaatgcttttaaaataataaagtgaa	Protospacer
 **********..************ ..*..*.

139. spacer 1.12|547011|34|CP025200|PILER-CR matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.706

aaatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaaggggctttacaaagtacaaaaattaaccact	Protospacer
*** * *******************   . .*.

140. spacer 1.21|547560|34|CP025200|PILER-CR matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.706

aaatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaaggggctttacaaagtacaaaaattaaccact	Protospacer
*** * *******************   . .*.

141. spacer 1.24|547743|34|CP025200|PILER-CR matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.706

aaatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaaggggctttacaaagtacaaaaattaaccact	Protospacer
*** * *******************   . .*.

142. spacer 1.35|546768|32|CP025200|CRISPRCasFinder matches to NZ_CP014964 (Geobacter anodireducens strain SD-1 plasmid pSD, complete sequence) position: , mismatch: 10, identity: 0.688

acaccgcaaagaagtacttgaacaagcaaacg	CRISPR spacer
ctgccgtaaagaagtacctgaacaagtagtaa	Protospacer
 ..***.**********.********.*.  .

143. spacer 1.41|547135|32|CP025200|CRISPRCasFinder matches to NZ_KY296096 (Pseudomonas aeruginosa strain 14057 plasmid p14057-tetA, complete sequence) position: , mismatch: 10, identity: 0.688

gactgcaatgcaagcaagagcggacatagcaa	CRISPR spacer
gtgggcaatccaagcaagagcggccatgtgcg	Protospacer
*   ***** ************* ***.   .

144. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_AP023193 (Escherichia coli strain TUM18530 plasmid pMTY18530-3_incFll, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

145. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

146. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

147. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP017847 (Escherichia coli strain FMU073332 plasmid pEcoFMU073332c, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

148. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP028430 (Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

149. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NC_011917 (Escherichia coli LF82 plasmid plLF82, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

150. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

151. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

152. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

153. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP053233 (Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

154. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

155. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

156. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

157. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

158. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

159. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

160. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

161. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

162. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP033097 (Escherichia coli strain CP53 plasmid pCP53-113k, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

163. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
agatacaatattttcctttaattatacttatc	Protospacer
.. ***.********.**********..*

164. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP028433 (Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

165. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

166. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

167. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

168. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

169. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

170. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_AP023200 (Escherichia coli strain TUM18780 plasmid pMTY18780-3, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

171. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

172. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
atattttatattttcttttaagtatttcttct	Protospacer
.  * . ************** *** ****

173. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
atattttatattttcttttaagtatttcttct	Protospacer
.  * . ************** *** ****

174. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_MG904996 (Escherichia coli strain 15OD0495 plasmid p15ODDR, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

175. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
atattttatattttcttttaagtatttcttct	Protospacer
.  * . ************** *** ****

176. spacer 1.46|547440|32|CP025200|CRISPRCasFinder matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 10, identity: 0.688

gactacgatattttcttttaattatatcttgg	CRISPR spacer
ataatctatattttcttttgattaaatcttca	Protospacer
.    * ************.**** ***** .

177. spacer 1.66|547012|33|CP025200|CRT matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.697

aatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaggggctttacaaagtacaaaaattaaccact	Protospacer
** * *******************   . .*.

178. spacer 1.75|547561|33|CP025200|CRT matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.697

aatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaggggctttacaaagtacaaaaattaaccact	Protospacer
** * *******************   . .*.

179. spacer 1.76|547622|33|CP025200|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

180. spacer 1.76|547622|33|CP025200|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

181. spacer 1.76|547622|33|CP025200|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

182. spacer 1.78|547744|33|CP025200|CRT matches to NC_011409 (Haemophilus influenzae plasmid ICEhin1056, complete sequence) position: , mismatch: 10, identity: 0.697

aatgtgctttacaaagtacaaaaaagtgatata	CRISPR spacer
aaggggctttacaaagtacaaaaattaaccact	Protospacer
** * *******************   . .*.

183. spacer 1.79|547805|33|CP025200|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

184. spacer 1.79|547805|33|CP025200|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

185. spacer 1.79|547805|33|CP025200|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 10, identity: 0.697

tacattattgttcaatattgacattacaagctt	CRISPR spacer
ctttttattgttctatattaacattacattaat	Protospacer
. . ********* *****.********    *

186. spacer 2.3|557600|33|CP025200|CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

tcatatttttgttatttcttgtttcaagtcgac	CRISPR spacer
ttatatttttgttatttcctgttgcagaatcct	Protospacer
*.****************.**** **.. .  .

187. spacer 1.22|547621|34|CP025200|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

188. spacer 1.22|547621|34|CP025200|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

189. spacer 1.22|547621|34|CP025200|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

190. spacer 1.25|547804|34|CP025200|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

191. spacer 1.25|547804|34|CP025200|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

192. spacer 1.25|547804|34|CP025200|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 11, identity: 0.676

ctacattattgttcaatattgacattacaagctt	CRISPR spacer
gctttttattgttctatattaacattacattaat	Protospacer
 . . ********* *****.********    *

193. spacer 1.37|546891|32|CP025200|CRISPRCasFinder matches to CP053577 (Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

catctatttcactttcctgttgctcagatttt	CRISPR spacer
gggctatttcacttgccagttgctcatggaca	Protospacer
 . *********** ** ******** .  .

194. spacer 1.37|546891|32|CP025200|CRISPRCasFinder matches to NZ_CP024166 (Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_01, complete sequence) position: , mismatch: 11, identity: 0.656

catctatttcactttcctgttgctcagatttt	CRISPR spacer
gggctatttcacttgccagttgctcatggaca	Protospacer
 . *********** ** ******** .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

893462 : 929320

Lactobacillus_phage(69.44%)

portal,terminase,integrase,capsid,tail

attL 877623:877638|attR 897723:897738

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
877623:877638	attL	NA	NA	NA	NA
AZN76440.1\|893462_894593_-\|integrase	site-specific integrase	A0A0M9JJ77	Lactobacillus_phage	7.6e-71	42.9
AZN77531.1\|894736_895345_-	DUF3862 domain-containing protein	A9D9J1	Lactobacillus_prophage	3.0e-42	47.8
AZN76441.1\|895432_895825_-	ImmA/IrrE family metallo-endopeptidase	Q6SEA2	Lactobacillus_prophage	7.5e-18	37.8
AZN76442.1\|895817_896162_-	XRE family transcriptional regulator	A0A1S5SCP6	Streptococcus_phage	1.8e-07	40.3
AZN76443.1\|896452_896662_+	transcriptional regulator	NA	NA	NA	NA
AZN76444.1\|896667_896967_+	hypothetical protein	NA	NA	NA	NA
AZN76445.1\|897276_897969_+	hypothetical protein	NA	NA	NA	NA
897723:897738	attR	NA	NA	NA	NA
AZN76446.1\|897971_898448_+	hypothetical protein	A0A0A1EL06	Lactobacillus_phage	1.0e-24	40.9
AZN76447.1\|898447_898831_+	hypothetical protein	NA	NA	NA	NA
AZN76448.1\|898827_899058_+	hypothetical protein	NA	NA	NA	NA
AZN76449.1\|899050_899419_+	hypothetical protein	NA	NA	NA	NA
AZN76450.1\|899536_900808_+	DEAD/DEAH box helicase	U3PFS7	Lactobacillus_phage	2.5e-131	57.5
AZN76451.1\|900804_901098_+	hypothetical protein	NA	NA	NA	NA
AZN76452.1\|901094_901277_+	sporulation protein cse60	NA	NA	NA	NA
AZN76453.1\|901278_902043_+	NTP-binding protein	U3PIS9	Lactobacillus_phage	3.9e-71	58.8
AZN76454.1\|902045_902630_+	single-stranded DNA-binding protein	U3PDN3	Lactobacillus_phage	1.2e-43	48.2
AZN76455.1\|902646_902958_+	hypothetical protein	NA	NA	NA	NA
AZN76456.1\|902960_903761_+	DNA primase	U3PBE3	Lactobacillus_phage	2.4e-87	65.6
AZN76457.1\|903944_905255_+	hypothetical protein	U3PCP1	Lactobacillus_phage	1.6e-109	50.5
AZN77532.1\|905579_906146_+	hypothetical protein	F8J1G5	Lactobacillus_phage	1.1e-14	50.0
AZN76458.1\|906295_906640_+	hypothetical protein	NA	NA	NA	NA
AZN76459.1\|906620_906827_+	hypothetical protein	NA	NA	NA	NA
AZN76460.1\|906829_907072_+	hypothetical protein	NA	NA	NA	NA
AZN76461.1\|907231_907432_+	hypothetical protein	NA	NA	NA	NA
AZN76462.1\|907431_907611_+	hypothetical protein	NA	NA	NA	NA
AZN76463.1\|907741_907969_+	hypothetical protein	NA	NA	NA	NA
AZN76464.1\|907968_908310_+	VRR-NUC domain-containing protein	L0P7E5	Lactobacillus_phage	2.4e-49	82.6
AZN76465.1\|908325_908769_+	hypothetical protein	Q6SEE2	Lactobacillus_prophage	6.9e-44	62.9
AZN76466.1\|909347_910340_+	hypothetical protein	Q7Y4L3	Streptococcus_phage	7.5e-06	28.4
AZN77533.1\|910447_910900_+	hypothetical protein	L0P6X1	Lactobacillus_phage	7.0e-36	57.1
AZN76467.1\|910886_912116_+\|terminase	PBSX family phage terminase large subunit	A9D9R9	Lactobacillus_prophage	4.9e-164	65.8
AZN76468.1\|912106_913576_+\|portal	portal protein	X2CY64	Lactobacillus_phage	1.3e-176	64.8
AZN76469.1\|913587_915093_+	hypothetical protein	A9D9S7	Lactobacillus_prophage	2.9e-118	59.5
AZN76470.1\|915073_915340_+	hypothetical protein	NA	NA	NA	NA
AZN76471.1\|915332_915674_+	hypothetical protein	Q9AYW8	Lactococcus_phage	2.8e-13	40.6
AZN76472.1\|915790_916390_+	hypothetical protein	Q20DD5	Lactobacillus_phage	1.1e-28	44.2
AZN76473.1\|916407_917463_+\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	2.3e-37	34.1
AZN76474.1\|917480_917852_+	hypothetical protein	L0P6D1	Lactobacillus_phage	8.5e-56	88.6
AZN76475.1\|917848_918211_+	hypothetical protein	A9D9T8	Lactobacillus_prophage	2.9e-40	66.7
AZN76476.1\|918207_918609_+	hypothetical protein	Q20DD1	Lactobacillus_phage	2.3e-38	54.2
AZN76477.1\|918605_919031_+	hypothetical protein	L0P6G4	Lactobacillus_phage	1.6e-69	89.4
AZN76478.1\|918999_919188_+	hypothetical protein	L0P7B3	Lactobacillus_phage	5.1e-17	71.6
AZN76479.1\|919191_920652_+\|tail	phage tail protein	L0P8M7	Lactobacillus_phage	2.6e-241	86.4
AZN76480.1\|920663_921134_+\|tail	phage tail protein	A9D9V4	Lactobacillus_prophage	1.2e-62	72.9
AZN76481.1\|921144_921570_+	hypothetical protein	Q20DC6	Lactobacillus_phage	7.3e-43	61.3
AZN76482.1\|921837_925017_+\|tail	phage tail protein	X2CYG3	Lactobacillus_phage	2.6e-116	50.1
AZN76483.1\|925023_925722_+	hypothetical protein	L0P8M9	Lactobacillus_phage	1.9e-112	89.2
AZN76484.1\|925718_926786_+	hypothetical protein	L0P6D8	Lactobacillus_phage	2.5e-180	88.7
AZN76485.1\|926758_927103_+	hypothetical protein	L0P6Y6	Lactobacillus_phage	5.0e-58	96.5
AZN77534.1\|927128_927542_+	hypothetical protein	L0P6H1	Lactobacillus_phage	1.2e-63	91.2
AZN76486.1\|927531_928677_+	hypothetical protein	L0P7C2	Lactobacillus_phage	6.2e-198	89.0
AZN76487.1\|928669_929320_+	hypothetical protein	L0P8N4	Lactobacillus_phage	2.1e-81	84.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025200

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection