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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025283 Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD02, complete sequence 0 crisprs NA 0 0 0 0
CP025284 Lactobacillus plantarum subsp. plantarum strain nF1-FD plasmid pnF1FD01, complete sequence 0 crisprs csa3 0 0 3 0
CP025285 Lactobacillus plantarum subsp. plantarum strain nF1-FD chromosome, complete genome 0 crisprs csa3,cas3,DEDDh,DinG 0 0 5 0

Results visualization

1. CP025284
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 19160 12 Enterococcus_phage(40.0%) transposase NA
DBSCAN-SWA_2 22818 : 24114 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 35956 : 36763 1 Enterococcus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025285
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 359041 : 402574 42 Bacillus_phage(33.33%) tRNA,bacteriocin,protease,transposase NA
DBSCAN-SWA_2 539936 : 629963 110 Lactobacillus_phage(34.09%) tRNA,protease,integrase,terminase,tail,portal,capsid,head,plate,holin attL 530503:530518|attR 564451:564466
DBSCAN-SWA_3 1241725 : 1252365 10 Lactobacillus_phage(90.0%) transposase NA
DBSCAN-SWA_4 2097700 : 2110450 17 Lactobacillus_phage(37.5%) integrase,terminase,tail,portal,capsid,head attL 2096675:2096696|attR 2110626:2110647
DBSCAN-SWA_5 2304148 : 2312662 9 Synechococcus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage