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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033734 Staphylococcus cohnii strain FDAARGOS_538 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
CP033735 Staphylococcus cohnii strain FDAARGOS_538 chromosome, complete genome 0 crisprs csa3,cas3,DEDDh,DinG,WYL,RT 0 0 201 0

Results visualization

1. CP033735
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 12876 10 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_2 26667 : 33359 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 43510 : 44023 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_4 53908 : 54142 1 Staphylococcus_virus(100.0%) NA NA
DBSCAN-SWA_5 62819 : 63557 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_6 71867 : 77160 4 Enterococcus_phage(33.33%) NA NA
DBSCAN-SWA_7 89388 : 93800 4 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_8 102807 : 103008 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_9 139711 : 141618 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_10 158511 : 160811 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_11 169281 : 169899 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_12 173552 : 176662 2 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_13 180610 : 187293 9 Paenibacillus_phage(50.0%) transposase NA
DBSCAN-SWA_14 197765 : 206998 8 uncultured_virus(25.0%) tRNA NA
DBSCAN-SWA_15 219100 : 220477 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_16 225529 : 227986 1 Enterobacteria_phage(100.0%) protease NA
DBSCAN-SWA_17 233680 : 238538 8 Catovirus(50.0%) tRNA NA
DBSCAN-SWA_18 242447 : 257684 9 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_19 265226 : 267605 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_20 287024 : 287687 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_21 300324 : 301737 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_22 304881 : 305538 1 Elephant_endotheliotropic_herpesvirus(100.0%) NA NA
DBSCAN-SWA_23 317380 : 318163 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_24 325804 : 327103 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_25 339090 : 340635 3 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_26 354142 : 354877 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_27 362051 : 370027 6 Streptomyces_phage(25.0%) NA NA
DBSCAN-SWA_28 376716 : 377748 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_29 384337 : 391684 9 Paenibacillus_phage(40.0%) transposase NA
DBSCAN-SWA_30 399659 : 410516 11 Paenibacillus_phage(50.0%) transposase NA
DBSCAN-SWA_31 420426 : 421296 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_32 429449 : 437384 9 Staphylococcus_phage(16.67%) NA NA
DBSCAN-SWA_33 441086 : 466733 19 uncultured_Caudovirales_phage(31.25%) NA NA
DBSCAN-SWA_34 476956 : 477271 1 Staphylococcus_prophage(100.0%) transposase NA
DBSCAN-SWA_35 480372 : 482015 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_36 489434 : 490391 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_37 493912 : 496750 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_38 500883 : 553247 63 uncultured_Caudovirales_phage(41.38%) terminase,coat,integrase attL 519927:519947|attR 550661:550681
DBSCAN-SWA_39 558368 : 562912 7 Paenibacillus_phage(40.0%) transposase NA
DBSCAN-SWA_40 570813 : 572880 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_41 590760 : 594358 6 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_42 597827 : 643215 62 uncultured_Caudovirales_phage(50.98%) portal,head,integrase,tail,holin,terminase,capsid,protease attL 598289:598304|attR 610390:610405
DBSCAN-SWA_43 646406 : 648092 2 Golden_Marseillevirus(50.0%) NA NA
DBSCAN-SWA_44 652916 : 657146 3 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_45 661208 : 664671 3 Lake_Baikal_phage(50.0%) NA NA
DBSCAN-SWA_46 674878 : 684088 9 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_47 694390 : 698062 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_48 703997 : 709400 3 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_49 716470 : 718487 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_50 724428 : 728630 4 Paenibacillus_phage(75.0%) transposase NA
DBSCAN-SWA_51 747237 : 751896 3 Tupanvirus(33.33%) protease NA
DBSCAN-SWA_52 772167 : 782849 7 Paenibacillus_phage(50.0%) transposase NA
DBSCAN-SWA_53 790817 : 810456 18 Synechococcus_phage(18.18%) NA NA
DBSCAN-SWA_54 820555 : 829404 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_55 838777 : 840625 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_56 850777 : 857657 8 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_57 862700 : 863759 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_58 868389 : 872856 3 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_59 900964 : 903715 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_60 907708 : 912319 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_61 916400 : 917012 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 922972 : 925362 3 Abalone_herpesvirus(50.0%) NA NA
DBSCAN-SWA_63 930408 : 931341 1 Prochlorococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_64 934493 : 936539 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_65 949961 : 952053 3 Trichoplusia_ni_ascovirus(33.33%) NA NA
DBSCAN-SWA_66 959109 : 960551 3 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_67 972672 : 983538 9 Chrysochromulina_ericina_virus(20.0%) tRNA,protease NA
DBSCAN-SWA_68 988122 : 988884 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_69 993376 : 1002321 6 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_70 1013220 : 1018955 4 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_71 1023292 : 1024345 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_72 1030537 : 1031917 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_73 1036441 : 1043712 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_74 1050293 : 1050767 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_75 1056995 : 1059204 4 Paenibacillus_phage(75.0%) transposase NA
DBSCAN-SWA_76 1072676 : 1078808 7 Tupanvirus(25.0%) NA NA
DBSCAN-SWA_77 1083476 : 1084610 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_78 1088440 : 1090087 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_79 1095689 : 1100089 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_80 1104209 : 1108933 5 Paenibacillus_phage(66.67%) transposase NA
DBSCAN-SWA_81 1113460 : 1114732 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_82 1119879 : 1122227 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_83 1133165 : 1136624 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_84 1141089 : 1142694 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_85 1151568 : 1156088 6 Yellowstone_lake_phycodnavirus(33.33%) NA NA
DBSCAN-SWA_86 1159723 : 1163812 7 Paenibacillus_phage(75.0%) transposase NA
DBSCAN-SWA_87 1177745 : 1193177 20 Staphylococcus_phage(42.86%) NA NA
DBSCAN-SWA_88 1200856 : 1202635 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_89 1206352 : 1213407 5 Temperate_phage(25.0%) tRNA NA
DBSCAN-SWA_90 1222356 : 1225786 5 Anguillid_herpesvirus(33.33%) NA NA
DBSCAN-SWA_91 1233734 : 1249707 18 Paenibacillus_phage(20.0%) transposase NA
DBSCAN-SWA_92 1252794 : 1254279 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_93 1257647 : 1259057 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_94 1265922 : 1267344 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_95 1272353 : 1273694 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_96 1281540 : 1284355 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_97 1289843 : 1290467 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_98 1296868 : 1310568 13 Catovirus(28.57%) tRNA NA
DBSCAN-SWA_99 1313688 : 1314636 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_100 1321105 : 1324218 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_101 1327230 : 1329054 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_102 1333136 : 1333598 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_103 1346767 : 1384347 30 uncultured_Mediterranean_phage(17.65%) tRNA,protease NA
DBSCAN-SWA_104 1395760 : 1401254 5 Paenibacillus_phage(66.67%) tRNA,transposase NA
DBSCAN-SWA_105 1411076 : 1422348 10 Bacillus_virus(20.0%) tRNA,protease NA
DBSCAN-SWA_106 1426510 : 1434479 5 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_107 1438305 : 1440066 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_108 1444799 : 1448003 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_109 1460907 : 1465336 4 Providencia_phage(50.0%) tRNA NA
DBSCAN-SWA_110 1469861 : 1474058 4 Enterococcus_phage(50.0%) NA NA
DBSCAN-SWA_111 1478623 : 1481397 2 Pithovirus(50.0%) tRNA NA
DBSCAN-SWA_112 1484887 : 1486597 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_113 1495304 : 1500466 3 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_114 1511189 : 1550632 39 Staphylococcus_phage(82.76%) tRNA,transposase NA
DBSCAN-SWA_115 1554727 : 1555465 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_116 1559498 : 1560261 2 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_117 1571489 : 1573739 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_118 1584597 : 1585320 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_119 1601406 : 1603143 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_120 1617961 : 1618591 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_121 1625757 : 1630793 4 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_122 1637681 : 1648028 9 Bacillus_virus(40.0%) NA NA
DBSCAN-SWA_123 1651981 : 1653751 2 Listeria_phage(50.0%) NA NA
DBSCAN-SWA_124 1657677 : 1658103 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_125 1663306 : 1665764 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_126 1669232 : 1671189 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_127 1678731 : 1682088 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_128 1685205 : 1690953 4 Bodo_saltans_virus(33.33%) tRNA NA
DBSCAN-SWA_129 1694775 : 1699744 4 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_130 1712706 : 1716037 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_131 1720616 : 1722134 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_132 1729635 : 1730280 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_133 1735983 : 1736403 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_134 1746550 : 1758325 13 Paenibacillus_phage(33.33%) transposase NA
DBSCAN-SWA_135 1764026 : 1765637 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_136 1774805 : 1778427 4 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_137 1790586 : 1794282 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_138 1804195 : 1805101 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_139 1820025 : 1820988 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_140 1830723 : 1832316 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_141 1839685 : 1841358 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_142 1856639 : 1870017 10 Paenibacillus_phage(33.33%) transposase NA
DBSCAN-SWA_143 1882919 : 1883525 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_144 1886600 : 1887593 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_145 1895135 : 1895885 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_146 1910179 : 1913538 3 Cedratvirus(50.0%) NA NA
DBSCAN-SWA_147 1931605 : 1932250 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_148 1940672 : 1943877 3 Diadromus_pulchellus_ascovirus(50.0%) NA NA
DBSCAN-SWA_149 1956605 : 1957505 1 Amsacta_moorei_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_150 1974695 : 1975904 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_151 1979745 : 1982296 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_152 1995378 : 1996919 2 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_153 2013361 : 2013937 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_154 2031665 : 2032028 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_155 2046191 : 2047949 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_156 2051100 : 2056350 6 Paenibacillus_phage(66.67%) transposase NA
DBSCAN-SWA_157 2059557 : 2060742 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_158 2069068 : 2069716 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_159 2074418 : 2075237 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_160 2089858 : 2090359 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_161 2096367 : 2098161 1 Vaccinia_virus(100.0%) NA NA
DBSCAN-SWA_162 2130362 : 2132126 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_163 2153896 : 2158563 4 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_164 2173397 : 2175140 1 Ostreococcus_lucimarinus_virus(100.0%) NA NA
DBSCAN-SWA_165 2184867 : 2187120 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_166 2201757 : 2203449 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_167 2210320 : 2225927 14 Trichoplusia_ni_ascovirus(12.5%) NA NA
DBSCAN-SWA_168 2229291 : 2230050 1 Staphylococcus_phage(100.0%) protease NA
DBSCAN-SWA_169 2237683 : 2238376 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_170 2253416 : 2254121 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_171 2273693 : 2274326 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_172 2307899 : 2308565 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_173 2312524 : 2316341 3 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_174 2320532 : 2328834 6 Klosneuvirus(33.33%) holin NA
DBSCAN-SWA_175 2333363 : 2334686 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_176 2340216 : 2348369 8 Thermoanaerobacterium_phage(33.33%) NA NA
DBSCAN-SWA_177 2352191 : 2352980 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_178 2364054 : 2364945 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_179 2368728 : 2372223 3 Enterococcus_phage(66.67%) NA NA
DBSCAN-SWA_180 2390189 : 2390864 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_181 2395835 : 2398562 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_182 2402688 : 2406216 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_183 2410104 : 2418881 10 Streptococcus_phage(60.0%) transposase NA
DBSCAN-SWA_184 2425180 : 2429615 5 Staphylococcus_phage(75.0%) NA NA
DBSCAN-SWA_185 2439568 : 2440177 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_186 2445788 : 2448369 2 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_187 2452337 : 2453012 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_188 2457769 : 2465474 6 Paenibacillus_phage(50.0%) transposase NA
DBSCAN-SWA_189 2471063 : 2471828 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_190 2480235 : 2482653 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_191 2504756 : 2505608 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_192 2534172 : 2535579 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_193 2542714 : 2543548 2 Bacillus_phage(100.0%) transposase NA
DBSCAN-SWA_194 2550881 : 2572042 19 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_195 2575359 : 2577036 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_196 2585116 : 2591020 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_197 2595690 : 2598666 2 Megavirus(50.0%) NA NA
DBSCAN-SWA_198 2605046 : 2615140 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_199 2625515 : 2626352 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_200 2647572 : 2649099 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_201 2662830 : 2665106 2 Pandoravirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage