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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP033208 Enterococcus faecium strain RBWH1 plasmid pRBWH1.2, complete sequence 0 crisprs RT 0 0 1 0
CP033210 Enterococcus faecium strain RBWH1 plasmid pRBWH1.4, complete sequence 0 crisprs NA 0 0 0 0
CP033206 Enterococcus faecium strain RBWH1 chromosome, complete genome 0 crisprs cas14j,RT,DEDDh,cas2,DinG,cas3,csa3 0 0 22 1
CP033209 Enterococcus faecium strain RBWH1 plasmid pRBWH1.3, complete sequence 0 crisprs cas14j,RT,csa3 0 0 2 0
CP033212 Enterococcus faecium strain RBWH1 plasmid pRBWH1.6, complete sequence 0 crisprs NA 0 0 0 0
CP033211 Enterococcus faecium strain RBWH1 plasmid pRBWH1.5, complete sequence 0 crisprs NA 0 0 0 0
CP033207 Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence 0 crisprs cas14j 0 0 3 0

Results visualization

1. CP033208
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 30280 : 38684 9 Streptococcus_phage(50.0%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP033206
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 42922 : 57730 15 Streptococcus_phage(90.91%) NA NA
DBSCAN-SWA_2 62357 : 69685 9 Streptococcus_phage(57.14%) integrase attL 58724:58737|attR 73063:73076
DBSCAN-SWA_3 249830 : 310065 55 Streptococcus_phage(72.73%) transposase,tRNA NA
DBSCAN-SWA_4 319698 : 380700 54 Acanthocystis_turfacea_Chlorella_virus(20.0%) transposase NA
DBSCAN-SWA_5 598524 : 655427 52 Streptococcus_phage(47.37%) integrase,transposase attL 645584:645600|attR 653538:653554
DBSCAN-SWA_6 749755 : 808598 59 Streptococcus_phage(23.53%) integrase,protease,transposase attL 745339:745398|attR 807630:808691
DBSCAN-SWA_7 844949 : 946342 105 Enterococcus_phage(22.45%) integrase,portal,capsid,tail,protease,transposase,tRNA,terminase,holin,head attL 854623:854638|attR 865846:865861
DBSCAN-SWA_8 1229272 : 1238428 10 Lysinibacillus_phage(16.67%) transposase NA
DBSCAN-SWA_9 1297638 : 1354865 52 Lysinibacillus_phage(18.75%) transposase,tRNA NA
DBSCAN-SWA_10 1359153 : 1416048 51 Streptococcus_phage(29.41%) integrase,transposase,tRNA attL 1359305:1359322|attR 1424480:1424497
DBSCAN-SWA_11 1450124 : 1482223 28 Streptococcus_phage(28.57%) integrase,transposase,tail attL 1447494:1447510|attR 1475283:1475299
DBSCAN-SWA_12 1531308 : 1580020 59 Synechococcus_phage(23.08%) integrase,protease,transposase attL 1559255:1559270|attR 1586638:1586653
DBSCAN-SWA_13 1661886 : 1734058 58 Streptococcus_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_14 1744254 : 1796567 50 Streptococcus_phage(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_15 1802270 : 1873408 75 Streptococcus_phage(57.89%) integrase,protease,transposase attL 1819017:1819041|attR 1879779:1879803
DBSCAN-SWA_16 1894019 : 1943656 43 Streptococcus_phage(26.67%) transposase,tRNA NA
DBSCAN-SWA_17 1959266 : 2017924 54 Streptococcus_phage(41.67%) holin,transposase,tRNA NA
DBSCAN-SWA_18 2212418 : 2278125 60 Bacillus_phage(18.75%) bacteriocin,protease,transposase,tRNA NA
DBSCAN-SWA_19 2342241 : 2375693 32 uncultured_virus(15.38%) bacteriocin,protease,transposase NA
DBSCAN-SWA_20 2540529 : 2560056 16 Staphylococcus_phage(27.27%) holin,transposase,tRNA NA
DBSCAN-SWA_21 2696211 : 2757555 54 Streptococcus_phage(68.18%) integrase,transposase attL 2686917:2686932|attR 2757812:2757827
DBSCAN-SWA_22 2783918 : 2851315 53 Streptococcus_phage(27.27%) integrase,protease,transposase attL 2798349:2798364|attR 2818814:2818829

Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP033206.1|AZQ17055.1|897452_898064_+|GNAT-family-N-acetyltransferase 897452_898064_+ 203 aa aa 89 NA NA 844949-946342 NA
3. CP033209
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 30496 33 Streptococcus_phage(27.78%) bacteriocin,transposase NA
DBSCAN-SWA_2 34397 : 38915 4 Bacillus_phage(50.0%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP033207
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 653 : 65198 55 Paenibacillus_phage(25.0%) integrase,transposase attL 38032:38091|attR 73448:73544
DBSCAN-SWA_2 71610 : 119418 55 Streptococcus_phage(43.75%) holin,transposase,bacteriocin NA
DBSCAN-SWA_3 154645 : 163449 9 Leptospira_phage(33.33%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage