CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034548	Bacillus albus strain PFYN01 chromosome, complete genome	0 crisprs	DEDDh,c2c9_V-U4,csa3,cas14k,cas3,Cas14u_CAS-V,cas14j,WYL,DinG	0	0	1	0

1. CP034548

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	871892 : 879580	8	uncultured_Caudovirales_phage(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>CP034548|871892:879580|DBSCAN-SWA
AATGAATAAAAAAACTTGGAGTTTCTTCATTGTTACTGTATTACTTATTGTTATGACATCATTGTCAGCAATGAAAGGGAGTTTAGAAATAGGGATAGTGGACCTTGTACAAGGGATATTTACAGGGGACAATGAAGATGTTGAAGTAATTAAAGATTTACGTTTCCCGCGTATTATTATTGCACTGTTCACCGGAGCAGCTCTTGCTGTTTCAGGTGTGCTTTTTCAAGCTGTTATGAAAAATCCACTTGCTGATGCTGGCGTAATCGGTATATCTTCAGGGGCAAGTTTTATGACCCTTGTTATTATTACGTTATTTCCTCAATTCTTTTTCTGGACACCAGTATTCGCCTTTTTAGGTGGTGCGTTTGCGTGTTATCTCGTTTATGCATTTTCATGGAAGTCAGGGTTAAGTCCACTTCGCATTATTTTAGTGGGTATAGCTATTAATGCGATGTTCACTGGCTTAAATGAATCGTTCATTACGATTTGCGGATATTTCATTAAGAGTATTAAGCAAACGACGACTTCTAACATAACGATGAAGACGTGGGGCGATGTAGAAATAATGGTTACCTATGGAACAATTGGCCTTATTCTTGCTCTGTTTGTAGGAGCTTGGTGTAATCTATTATCGTTACAAGATAAGACTGCGAAAAACTTAGGTTTGCACGTGACGAGAGTTCGTCTTATTATCTCTGCTATTGCAGTACTTTTAGCGGCAGTATCAACAGCGATTGCAGGTGTTATTGCTTTCGTAGGATTGCTCGTTCCGCACATTTCAAGACAACTAGTCGGTTCAGATCATAAAGTATTAATTCCATTTTCTGCTCTTGCAGGAGCGTTATTAATTTTGACTGCGGATACAATTGGAAGGTTAATTGTGCCACCTAACGAAATTCCAGCGGCGACGATTATGGCAGTTATTGGTGGCCCATTCTTAATATTCTTGCTTAGAAAGAGTGATAAAGTTCATGGAAATTAAAAATGTAACCTTTTCGTATGATAATGTAACAGATCGATTAAAATCGGTTAGTAGTGAAATAGAAATTGGTAAAATTACAACAATTATTGGTCCAAACGGTTGCGGGAAATCGACATTACTTGGCGTAATGTCAAGAAATCACGATCCTCGTAGCGGAGAGGTAATACTGGATGGAAAGGCGATTAGCCAATATAAACCGAAAGAGTTTGCTAGAAAATTAGCTGTTGTCCATCAACAAAATGAAGCACCGGCAGATATGACGGTAGAGAAATTAACAAGTTTTGGTCGTATGCCTCATAAAAATATTTTTTCCTCGCAAACTGATGAAGATAGAGACGCGATCGAAAGGGCTTTAGCATGTACGAATTTGCTAAATAAACGTGATAAAGAGATTCACGCTTTATCTGGTGGCGAAAGACAACGTGTCTGGATTGCTATGACGTTAGCTCAGAAAACACCAATGCTCTTTTTAGATGAACCGACAACTTATTTAGATATTTATTATCAACTTGAAATATTAGAGCTAGTAAAAGAGTTAAATGAAGTACATGGATTGACGATTGTTATGGTATTACACGATATTAATCAGGCAATTCGCTATAGTGATCATATCATCGTTATGAAAGACGGCGAGATTGTTACGAAAGGTAAGCCGGATGATGTTGTGACAGAAAGTATGATAAAGACGATATACGGTGTAGATGTCGTTGTAAAGCAAGATGAAGATACAGGATTGTATATGGTCCCAATGGGTATTTAAATATGCGAACAATCCGTTTTGAGGTGATAATTTGAGTAGTAAAAAAGAACGGAAGAAGAATTCTTTTTTTCAACGAATACTTACAGTTGTTTTTTTAGGTACCTTTTTCTATTCAGTATATGAATTAGGTGATATTTTCATGGATTACTATGAAAATCGTAAAGTAATGGCCGAAGCACAAAGCATTTATCAAAAAAGTCCGATAGAAGAGCAATCACAAGACGGGGAAGTGCGTAAACAATTCAAAGCTCTGCAGCAAATTAACGAAGAAATAGTTGGATGGATTACGATGGATGATACACAAATTAATTATCCAATCGTTCAAGCGAAAGACAATGATTACTATTTGTTCCGTAATTATAAAGGTGAAGATATGAGAGCAGGAAGCATCTTTATGGACTATCGTAATGATGTGAAATCTCAAAATCGAAATACGATTTTATATGGTCACCGTATGAAAGATGGTTCTATGTTTGGAAGTTTAAAGAAAATGTTAGATGAGGAATTCTTCATGTCACATCGTAAATTATATTATGATACATTATTTGAAGGATATGATCTTGAAGTGTTCTCGGTGTATACAACAACAACTGATTTTTATTACATTGAAACGGATTTTAGCAGTGATATGGAATACGCATCATTTTTGGAGAAAATTCAAGAGAAATCGCTGTACAAAACGGATACAAAATTGACAGCAAGTGATCAAATCGTAACACTTTCGACGTGTGACTATGCACTTGATCCGGAAGCAGGAAGGTTAGTCGTACATGCGAAACTAGTAAAAAGAAAATAAATAAAAAAGTATAGAATATGAGAAGTGGTAACGCTCCTCATATTCTATACTTAAAAAAAGAAATATGTTTACTGTGCTGCAGCCATTGGCATACGTACAACTTTCACATCATAGTAAGAGATTTTGTTATCAAGAATATAATCTGGCATTCCACCTTGATGGGAGTGAGCAGCTTTAAATGCTGGGCTCTTCGTCCAACCTTGGAAATCTTCTTTGCATTCCAGCGTGTGCTAATTGTTACTTCATCATAATCAACTGTATTTTGTGTTAGAAGCACTTCTAATCCTAAAAAGCCTGGCATTGTTTCGACTTGACCTACTTTATTAAAACGATCAATTAATTTATGTCCATTACCCTTTGTAATTTTAGCTGTATTTGTAACAATAATCATGTTTATTCCTCCTATTAAATGTAGCCTTTATTTTCGAGAACTCATATACATTAAATGATAATGAAAATCATTATCATTGTCAATGGTAAATATGGAATATATAAGTATTTTTTCTATTATGTTGGACAGTAACAATTTTAGTTCAAAATGTAGTAAACATGTGGCAGTTAAGCGAGGGAATGAGCGAGTTGTACTAGCAAAGCAATAATATGGTATAGTGAAACGAGGCTGTTTTTTCAGTCTCGTTTTTTAAATGCTTCCTGTAGAGAAAGCATGCAAATGGAAAGGAAGTTATTATATGCGATCAGAAGTAACTGTAAAAATAAAACCGAAATTTATAAAAGAAATTAAAAGTGGATATCCGCTTATTTTAAAAGATGCGATTCAAAATTTAAATGATGTTCAGAAAGAAGGAACAATCATTAAAGTAGTAGATGAGAAGAACCAATTTATCGGAAAAGGCTATTATGGAAAACAAAATAAAGGATACGGCTGGATTTTAACGAGAAAAGAGAGTGAACAAATTAATCAAACTTTTTTTGAAAGTAAAATAAAATCAGCCTTACATAAAAGAAAGCAATTTTACAAATCAAGTGATACGACAGCATTCCGCGCCCTAAACGGTGAAGGTGATGGTCTTGGGGGCTTAATCATTGATTATTATGACGGTTATTATGTAGTAAGTTGGTATAGTGAAGGGATTTATACTTTCAGAGATGAGATTATCGCAGCTCTTCAAAAAGTAGCAAACTTTAAAGGCATTTATGAGAAAAAGCGTTTTGATACGAAAGGAAAATACATTGAAGGCGATGATTTCGTAGCAGGAGAGCGCGGTGAGTTTCCGCTTATCGTAAAAGAGAATGGTGTGAACTTTGCTGTTTATTTAAATGACGGAGCGATGGTTGGTGTATTTTTAGATCAGCGTAACGTTCGAAAACAAATTCGTGATAAGTATGCAAAGGGAAGAACCGTTTTAAATATGTTCTCTTATACAGGTGCTTTCTCCGTATTTGCAGCGCTTGGTGGAGCGAGCAAAACGACGAGTGTAGATCTTGCAAATCGTAGTTTAAGTAAAACGATTGAGCAGTTTAGTGTAAATGAAGTTGATTATGAAGCGCAAGATATTATTGTAGAAGATGTTTTTCTGTACTTCAAATATGCAGCGAAGAAAAAGATGAAATTTGATATGGTCGTACTTGATCCTCCAAGCTTTGCACGTTCAAAGAAATATACATTTAGTGCAGCGAAAGATTATAAAAACTTATTAAAAGAAACGATTGCCATTACAGAAAATAACGGGATTATCGTCGCTTCTACAAATTGTAGCGCATTCGATATGAAAAAGTTTAAAGGCTTTATCGATACGGCATTTAAAGAAATGAATGGCAAATATAAAATATTAGAAGAACATTCTTTACCAGAAGATTTCCGTACCATTGATCAATTTAAAGAAGGAGACTATTTAAAAGTAGTTTTCATCGGGAAAATTAAAGGGTAATAAAGAAAAGGAGCTCGCGTTTACTTGAGCTCCTTTTCTTATTGAACGATATTTTGTACTCTACCGACTTGCCCGTCTTGCAATCGCACTTTAATGCCATGCGGATGGGAAGGGGAGTTTGTTAAAATATCTTTTACAATTCCACGTGTTAGTTTGCCTGTGCGTTGATCTTGTTTTAATACAATATCAACTTCAAGGCCGGGTGCGATATTAGAACGTTTTTGTCCGTTCATTTATACACCTGTACGTCTACGTTGGTTGTTTGTTTTCTTCGTTTGTTGGTTTTGTAATTTTTTTGTTTCTTGGCTTTGGTTTTTAGCATTTTGACCATTACCGTTACCTTGCTTTTTCTTTGCAAGTTGTTCGCGCATTAAATCAGCTAAGCTTACTTTTTTGTTTTCTGACATGATAAGTCTCCTTTATATAAAGTTAATTATGAACTATCGTAGTAAATTTCATCATATCATTGTTAGGGAAGGAAGGGAAGTTGGTTTGAAAATTCATATAATTCTTCACAGTATTCATTCGTTACGATACAATTAAAATGCTAATGTTTGTAAAAAAGGGGATAGACATATGTCACATCATATTTTATTAGTTGAAGATGATCTCTCAATTCAAGAGATGGTGGAAAAGTATTTAATAAAAGAGGGCTTTCAAGTTACAATCGCATCCGATGGAGAAGAAGGGGTAAACACATATTTAAAAGGTTCATTTGATTTAATTATTCTTGATATTATGATGCCAAAGCTAGATGGCTTAGAGGTTGTGCGAATCATTCGAGAAAAAAGTGCTGTCCCGATTTTAATGATGTCGGCAAAAGATACAGATGTTGATAAAGCTGTTGGATTAGGACTTGGAGCAGATGATTATATTTGTAAGCCATTTTCTATGATTGAATTAGCTGCACGTGTAAAGGCAGGTATTCGGAGGTCTACGAAATATTCGGCTACAGAATCAATAGAAGAAAAGATGATTCAAATTGGTGATCTAACAATCGATCCAATTAATTTTACGGTTGAAAAAAACGGGAAACCTCTCAAGCTTACTTTAAAAGAATTTGAAATCTTAAAACTGTTCGTAAAAAATCAAAATCGTGTATTTACAAAAGCACAAATATATACACTAATTTGGAACGAAGAGTATTACGGTGACGATAACGTTATTAATGTTCATATGAGAAGGTTGCGTGAGAAAATCGAAAGTGATCCATCTAATCCAGAATACATTAAAACGTTATGGGGTATCGGTTATAAGTTGGAAGTGATGTAATATGGTCAATTTGTTAATAAGTATTATTTTTATATTGTTATGTATCATTTATATACAATATAAAATGAGGAAAAATAGTAATAAAAATTTGAGATACACATATGAAAAATTAGAAAGTATTGTTAATGAAAAAACAGGCGAGACGTTACTCGTTATGACAGATGATCTAGAATTGCAAAAATTATTAGTGGCAATTAATCAATTATTAGATGCAAAACAGAAAACAAATGCAGATCATGCGAAAGTAGAAATTTCGATGAGAAAAATGCTTTCAAATATTTCACATGACTTGAAAACACCGCTAACAGTTATTCTTGGATATACAGAAATGTTAAATAAGGATAAAACGATGGGTAAAGAAGAACAACAAATATTACTTGAAAAGGTGCATGTGAAAACACTAGAAGTAATGGAACTAATTCATAAGTTTTTTGACTTAGCAAAATTAGAATCTGGTGACAAAGCAATCGAGATGACAAAAGTGAATATGAATGAAGTTTGTCGTGAGAAGATTTTATCTTTTTATGATTTAGTGACGTCCAAAGGTTTTCATGTTCATATTGATATACCAGAAAGAAATATATATGCACTTGGAAATGTAGAAGTATTGGGTAGGGTATTGAACAATTTAATATCAAATGCAATTACATATGGAGACGATGGAAAGATACTGGGTATGACGTTAAGAGATGATGAAACGAATGTGTATATAGACGTATGGGATAAAGGAAAAGGAATTGATGAATCTCATATTGATAAAGTGTTTGAGCGTATGTACACACTTGAAGATTCGAGAAATAGATTGTACCAAGGAAGCGGTTTAGGGTTAACGATTACGAAAAGACTGGTGGAAGCGATGGATGGAAAAATTCATCTTTCTAGTAAGCCGTATGAAAAAACAATTTTTACAGTTGCATTAAAAAAGATGCAGTTTTAGCTTGTAGAGAAGTAGATTCTACAAGCTTTTTTTTCAGCGTAAGGAATTTGTAAGAAACGGGTAAGAAAAAAGAGATTTCCGTTGTCTATTATAAAAATATAAAGTAGTGCGAAAGGGGAAAGTGACATGACCTATATATTAAAAACGAATCAGTTAACGAAAGTGTTTAAAGGGAAAGAAGTTATTTCTAGCGTTAACATGCATGTAAAAAAAGGAGAAATATACGGTTTCTTAGGACCGAATGGTGCTGGTAAAACAACGATTATGAAAATGATTACAAATTTAATAAAACCGACGAGCGGTGATATTGAAATTTTTGGTGAAAAGTTAACGGATACATCTTATGAATTGTTAAAGCGCATGGGGACCATTATCGAATATCCAATCTTTTATGATAAATTAACGGCGAAGGAAAACTTAGAATTACATTGTGAATATATGGGGTATTACGACAAGAACGCAATTGATCATGCTTTACATTTAGTAAAACTGCACGGTATAGATGATAAAAAAGTAAAAGATTTTTCATTAGGGATGAAGCAACGACTTGGTATTGCAAGGGCGATCATGACAAAGCCAGAACTACTCATTTTAGATGAGCCAATTAACGGTTTAGATCCAATAGGTATTAAAGAATTACGAGACTTATTTAAAATGCTCTGCAAAGAATATGGCATTACATTATTAGTTTCTAGTCATATTTTAGGTGAGATGGAATTAATGGCGGATACAATTGGTGTAATTCAAAATGGAAAACTAATAAAAGAAGTTTCAATGAAGAGTATTAACGGAAAACAAACAGAGTACATTGAAATTACTGTTCCTGATGTGAAGCGTGCAGCTTATATTTTAGAAGATAAACTCGGTATAAAAAATTACAAAATAATGAGCGGAAATATGATTCGTGTGTATGAATTGAAGGTGACGCAGCAAGCCATTTCAAAAGCACTTATTATGAATGATGTGGAAATTGAAAGTATTAATAAGAAACATAGTTCCTTAGAGGAATATTTCTTAAATGTAATGGATGGAGAGGGCATTCATGCTTAA

Protein sequences of DBSCAN-SWA_1

>CP034548|871892:879580|877594_878530_+|AZQ46040.1|DBSCAN-SWA
MVNLLISIIFILLCIIYIQYKMRKNSNKNLRYTYEKLESIVNEKTGETLLVMTDDLELQKLLVAINQLLDAKQKTNADHAKVEISMRKMLSNISHDLKTPLTVILGYTEMLNKDKTMGKEEQQILLEKVHVKTLEVMELIHKFFDLAKLESGDKAIEMTKVNMNEVCREKILSFYDLVTSKGFHVHIDIPERNIYALGNVEVLGRVLNNLISNAITYGDDGKILGMTLRDDETNVYIDVWDKGKGIDESHIDKVFERMYTLEDSRNRLYQGSGLGLTITKRLVEAMDGKIHLSSKPYEKTIFTVALKKMQF
>CP034548|871892:879580|876359_876554_-|AZQ46038.1|DBSCAN-SWA
MNGQKRSNIAPGLEVDIVLKQDQRTGKLTRGIVKDILTNSPSHPHGIKVRLQDGQVGRVQNIVQ
>CP034548|871892:879580|872865_873636_+|AZQ46035.1|DBSCAN-SWA
MEIKNVTFSYDNVTDRLKSVSSEIEIGKITTIIGPNGCGKSTLLGVMSRNHDPRSGEVILDGKAISQYKPKEFARKLAVVHQQNEAPADMTVEKLTSFGRMPHKNIFSSQTDEDRDAIERALACTNLLNKRDKEIHALSGGERQRVWIAMTLAQKTPMLFLDEPTTYLDIYYQLEILELVKELNEVHGLTIVMVLHDINQAIRYSDHIIVMKDGEIVTKGKPDDVVTESMIKTIYGVDVVVKQDEDTGLYMVPMGI
>CP034548|871892:879580|878656_879580_+|AZQ46041.1|DBSCAN-SWA
MTYILKTNQLTKVFKGKEVISSVNMHVKKGEIYGFLGPNGAGKTTIMKMITNLIKPTSGDIEIFGEKLTDTSYELLKRMGTIIEYPIFYDKLTAKENLELHCEYMGYYDKNAIDHALHLVKLHGIDDKKVKDFSLGMKQRLGIARAIMTKPELLILDEPINGLDPIGIKELRDLFKMLCKEYGITLLVSSHILGEMELMADTIGVIQNGKLIKEVSMKSINGKQTEYIEITVPDVKRAAYILEDKLGIKNYKIMSGNMIRVYELKVTQQAISKALIMNDVEIESINKKHSSLEEYFLNVMDGEGIHA
>CP034548|871892:879580|875121_876321_+|AZQ46037.1|DBSCAN-SWA
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQKEGTIIKVVDEKNQFIGKGYYGKQNKGYGWILTRKESEQINQTFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVVSWYSEGIYTFRDEIIAALQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAALGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIGKIKG
>CP034548|871892:879580|876897_877593_+|AZQ46039.1|DBSCAN-SWA
MSHHILLVEDDLSIQEMVEKYLIKEGFQVTIASDGEEGVNTYLKGSFDLIILDIMMPKLDGLEVVRIIREKSAVPILMMSAKDTDVDKAVGLGLGADDYICKPFSMIELAARVKAGIRRSTKYSATESIEEKMIQIGDLTIDPINFTVEKNGKPLKLTLKEFEILKLFVKNQNRVFTKAQIYTLIWNEEYYGDDNVINVHMRRLREKIESDPSNPEYIKTLWGIGYKLEVM
>CP034548|871892:879580|871892_872876_+|AZQ46034.1|DBSCAN-SWA
MNKKTWSFFIVTVLLIVMTSLSAMKGSLEIGIVDLVQGIFTGDNEDVEVIKDLRFPRIIIALFTGAALAVSGVLFQAVMKNPLADAGVIGISSGASFMTLVIITLFPQFFFWTPVFAFLGGAFACYLVYAFSWKSGLSPLRIILVGIAINAMFTGLNESFITICGYFIKSIKQTTTSNITMKTWGDVEIMVTYGTIGLILALFVGAWCNLLSLQDKTAKNLGLHVTRVRLIISAIAVLLAAVSTAIAGVIAFVGLLVPHISRQLVGSDHKVLIPFSALAGALLILTADTIGRLIVPPNEIPAATIMAVIGGPFLIFLLRKSDKVHGN
>CP034548|871892:879580|873667_874432_+|AZQ46036.1|DBSCAN-SWA
MSSKKERKKNSFFQRILTVVFLGTFFYSVYELGDIFMDYYENRKVMAEAQSIYQKSPIEEQSQDGEVRKQFKALQQINEEIVGWITMDDTQINYPIVQAKDNDYYLFRNYKGEDMRAGSIFMDYRNDVKSQNRNTILYGHRMKDGSMFGSLKKMLDEEFFMSHRKLYYDTLFEGYDLEVFSVYTTTTDFYYIETDFSSDMEYASFLEKIQEKSLYKTDTKLTASDQIVTLSTCDYALDPEAGRLVVHAKLVKRK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ46034.1|871892_872876_+	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.4e-17	26.5
AZQ46035.1|872865_873636_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-13	26.6
AZQ46036.1|873667_874432_+	class B sortase	NA	NA	NA	NA
AZQ46037.1|875121_876321_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	2.1e-71	41.3
AZQ46038.1|876359_876554_-	YwbE family protein	NA	NA	NA	NA
AZQ46039.1|876897_877593_+	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	1.1e-06	28.8
AZQ46040.1|877594_878530_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.0e-20	24.8
AZQ46041.1|878656_879580_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-45	43.5