CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
AP018935	Streptococcus agalactiae HU-GS5823 DNA, complete genome	1 crisprs	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3,PD-DExK	0	16	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: AP018935_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018935_1

931914-933269

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	PILER-CR

20 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of AP018935_1

>merge|AP018935|1|931914-933269|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATGCGGTCACTCATATAAGACATCTCCTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCCAGTTGCAATGACTGCGCCAGAAGTCGGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAATGGTTTATCTCTTTTTTCATCTGTTATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAATTATCAATGTTTACAACTGTTTTAGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAAAATCCTGAAACAGAATGGGATTGATATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAATCAGAACGCCTTATTTGAAGCAGTTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGTTCAATCTGTTCTTGCTTTTGGTCATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACACCGTTGCGGTTGTTGTCGGTCACTCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCTATTAACAATAGTTTTATCCAATTGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGAAAACAAGCGCAAAGCTGTCAGAAAACAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGTTATCAATGCTATATGGTTTCTCATCTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCGTACCATCTATCAATTTACCGCAAGCTGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCTAAATGCTGGTGACTGCTTTGCATAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTGCTGCTAGACCCAAACAGTTTATTTTTAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCTTTTTTAGATAATGTGCGATCACGGACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTACCAATGCTTCCATATCGCTTATATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTACTTGACGAATTGAAGATGACGGAATTTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGTTATACATTTACTAATCCATCAGCATTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>AP018935|1|1|931914-933203|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGCGGTCACTCATATAAGACATCTCCTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCAGTTGCAATGACTGCGCCAGAAGTCGG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATGGTTTATCTCTTTTTTCATCTGTTAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATTATCAATGTTTACAACTGTTTTAGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAATCCTGAAACAGAATGGGATTGATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATCAGAACGCCTTATTTGAAGCAGTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGTTCAATCTGTTCTTGCTTTTGGTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACACCGTTGCGGTTGTTGTCGGTCACTCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTATTAACAATAGTTTTATCCAATTGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGAAAACAAGCGCAAAGCTGTCAGAAAACA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGTTATCAATGCTATATGGTTTCTCATCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTACCATCTATCAATTTACCGCAAGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGATTATTTCCTACATAATACGCACGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCTAAATGCTGGTGACTGCTTTGCATAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGCTGCTAGACCCAAACAGTTTATTTTTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTTTTTTAGATAATGTGCGATCACGGAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTACCAATGCTTCCATATCGCTTATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>AP018935|1|1|931914-933269|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGCGGTCACTCATATAAGACATCTCCTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCCAGTTGCAATGACTGCGCCAGAAGTCGG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAATGGTTTATCTCTTTTTTCATCTGTTAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATTATCAATGTTTACAACTGTTTTAGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAATCCTGAAACAGAATGGGATTGATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATCAGAACGCCTTATTTGAAGCAGTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGTTCAATCTGTTCTTGCTTTTGGTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACACCGTTGCGGTTGTTGTCGGTCACTCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTATTAACAATAGTTTTATCCAATTGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGAAAACAAGCGCAAAGCTGTCAGAAAACA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGTTATCAATGCTATATGGTTTCTCATCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTACCATCTATCAATTTACCGCAAGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGATTATTTCCTACATAATACGCACGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTCTAAATGCTGGTGACTGCTTTGCATAAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTGCTGCTAGACCCAAACAGTTTATTTTTAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCCTTTTTTAGATAATGTGCGATCACGGAC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTTTACCAATGCTTCCATATCGCTTATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGCTAATTCTCATCTCACCGAGATGGATA
GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>AP018935|1|1|932112-932741|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AATTATCAATGTTTACAACTGTTTTAGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAATCCTGAAACAGAATGGGATTGATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATCAGAACGCCTTATTTGAAGCAGTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGTTCAATCTGTTCTTGCTTTTGGTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACACCGTTGCGGTTGTTGTCGGTCACTCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTATTAACAATAGTTTTATCCAATTGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGAAAACAAGCGCAAAGCTGTCAGAAAACA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGTTATCAATGCTATATGGTTTCTCATCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTACCATCTATCAATTTACCGCAAGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCTAAATGCTGGTGACTGCTTTGCATAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTGCTGCTAGACCCAAACAGTTTATTTTTAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCTTTTTTAGATAATGTGCGATCACGGACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTACCAATGCTTCCATATCGCTTATATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	ACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	GGTTATACATTTACTAATCCATCAGCATT


>AP018935|1|2|933036-933204|PILER-CR
	AATTATCAATGTTTACAACTGTTTTAGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAAAATCCTGAAACAGAATGGGATTGATAT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATCAGAACGCCTTATTTGAAGCAGTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CCGTTCAATCTGTTCTTGCTTTTGGTCATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACACCGTTGCGGTTGTTGTCGGTCACTCAA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCTATTAACAATAGTTTTATCCAATTGTTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGAAAACAAGCGCAAAGCTGTCAGAAAACA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGTTATCAATGCTATATGGTTTCTCATCTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CGTACCATCTATCAATTTACCGCAAGCTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCCGATTATTTCCTACATAATACGCACGTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCTAAATGCTGGTGACTGCTTTGCATAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTGCTGCTAGACCCAAACAGTTTATTTTTAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCTTTTTTAGATAATGTGCGATCACGGACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTACCAATGCTTCCATATCGCTTATATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	ACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACT	GGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACA

Protein	Signature genes	Signature genes Name	Protein_function
AP018935.1\|BBG32637.1\|940322_940757_+\|Peptide-methionine-sulfoxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
AP018935.1\|BBG32630.1\|930819_931161_+\|CRISPR-associated-endoribonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
AP018935.1\|BBG32624.1\|922163_923294_+\|Oxygen-independent-coproporphyrinogen-III	unknown	unknown	gnl\|CDD\|236309
AP018935.1\|BBG32628.1\|925839_929952_+\|CRISPR-associated-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
AP018935.1\|BBG32625.1\|923297_924035_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366738
AP018935.1\|BBG32636.1\|939858_940323_+\|Putative-phosphinothricin-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
AP018935.1\|BBG32640.1\|944924_945563_-\|Streptogramin-A-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
AP018935.1\|BBG32622.1\|921295_921667_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377982
AP018935.1\|BBG32638.1\|940908_943701_+\|Calcium-transporting-ATPase-1	unknown	unknown	gnl\|CDD\|223550
AP018935.1\|BBG32623.1\|921691_922072_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
AP018935.1\|BBG32631.1\|931147_931813_+\|CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
AP018935.1\|BBG32629.1\|929953_930823_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
AP018935.1\|BBG32639.1\|943700_944804_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371412
AP018935.1\|BBG32634.1\|936457_939091_+\|Internalin-A	unknown	unknown	gnl\|CDD\|380193
AP018935.1\|BBG32641.1\|946273_946885_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223475
AP018935.1\|BBG32633.1\|934378_936211_+\|Elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
AP018935.1\|BBG32632.1\|933826_934243_+\|Nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
AP018935.1\|BBG32626.1\|924035_924806_+\|Acid-sugar-phosphatase	unknown	unknown	gnl\|CDD\|319832
AP018935.1\|BBG32635.1\|939190_939850_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224336
AP018935.1\|BBG32627.1\|924795_925452_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226884

Protein	Function_ID	Function_description	E-value
AP018935.1\|BBG32637.1\|940322_940757_+\|Peptide-methionine-sulfoxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
AP018935.1\|BBG32630.1\|930819_931161_+\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
AP018935.1\|BBG32624.1\|922163_923294_+\|Oxygen-independent-coproporphyrinogen-III	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
AP018935.1\|BBG32628.1\|925839_929952_+\|CRISPR-associated-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
AP018935.1\|BBG32625.1\|923297_924035_+\|hypothetical-protein	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
AP018935.1\|BBG32636.1\|939858_940323_+\|Putative-phosphinothricin-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
AP018935.1\|BBG32640.1\|944924_945563_-\|Streptogramin-A-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	6.8383e-72
AP018935.1\|BBG32622.1\|921295_921667_+\|hypothetical-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
AP018935.1\|BBG32638.1\|940908_943701_+\|Calcium-transporting-ATPase-1	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
AP018935.1\|BBG32623.1\|921691_922072_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
AP018935.1\|BBG32631.1\|931147_931813_+\|CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	4.28312e-121
AP018935.1\|BBG32629.1\|929953_930823_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
AP018935.1\|BBG32639.1\|943700_944804_+\|hypothetical-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
AP018935.1\|BBG32634.1\|936457_939091_+\|Internalin-A	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.69351e-21
AP018935.1\|BBG32641.1\|946273_946885_+\|hypothetical-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.1265e-31
AP018935.1\|BBG32633.1\|934378_936211_+\|Elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
AP018935.1\|BBG32632.1\|933826_934243_+\|Nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78
AP018935.1\|BBG32626.1\|924035_924806_+\|Acid-sugar-phosphatase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
AP018935.1\|BBG32635.1\|939190_939850_+\|hypothetical-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	5.44358e-33
AP018935.1\|BBG32627.1\|924795_925452_+\|hypothetical-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52

>AP018935.1|BBG32631.1|931147_931813_+|CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEIKILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>AP018935.1|BBG32630.1|930819_931161_+|CRISPR-associated-endoribonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>AP018935.1|BBG32629.1|929953_930823_+|CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>AP018935.1|BBG32628.1|925839_929952_+|CRISPR-associated-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>AP018935.1|BBG32627.1|924795_925452_+|hypothetical-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>AP018935.1|BBG32626.1|924035_924806_+|Acid-sugar-phosphatase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>AP018935.1|BBG32625.1|923297_924035_+|hypothetical-protein
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>AP018935.1|BBG32624.1|922163_923294_+|Oxygen-independent-coproporphyrinogen-III
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>AP018935.1|BBG32623.1|921691_922072_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>AP018935.1|BBG32622.1|921295_921667_+|hypothetical-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>AP018935.1|BBG32632.1|933826_934243_+|Nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>AP018935.1|BBG32633.1|934378_936211_+|Elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>AP018935.1|BBG32634.1|936457_939091_+|Internalin-A
MKGQKIIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELYLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKNKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>AP018935.1|BBG32635.1|939190_939850_+|hypothetical-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIIHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>AP018935.1|BBG32636.1|939858_940323_+|Putative-phosphinothricin-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>AP018935.1|BBG32637.1|940322_940757_+|Peptide-methionine-sulfoxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>AP018935.1|BBG32638.1|940908_943701_+|Calcium-transporting-ATPase-1
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKGSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDRLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>AP018935.1|BBG32639.1|943700_944804_+|hypothetical-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>AP018935.1|BBG32640.1|944924_945563_-|Streptogramin-A-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>AP018935.1|BBG32641.1|946273_946885_+|hypothetical-protein
MNMKLSKRYRFWQKVIKALGVLALIATLVLVVYLYKLGILNDSNELKDLVHKYEFWGPMIFIVAQIVQIVFPVIPGGVTTVAGFLIFGPTLGFIYNYIGIIIGSVILFWLVKFYGRKFVLLFMDQKTFDKYESKLETSGYEKFFIFCMASPISPADIMVMITGLSNMSIKRFVTIIMITKPISIIGYSYLWIYGGDILKNFLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448736	Streptococcus phage Javan35, complete genome	34830-34859	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448956	Streptococcus phage Javan48, complete genome	37639-37668	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448781	Streptococcus phage Javan5, complete genome	36852-36881	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448749	Streptococcus phage Javan39, complete genome	39221-39250	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448938	Streptococcus phage Javan44, complete genome	34831-34860	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448911	Streptococcus phage Javan34, complete genome	34830-34859	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448916	Streptococcus phage Javan36, complete genome	34830-34859	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448669	Streptococcus phage Javan11, complete genome	34530-34559	0	1.0
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	MK448956	Streptococcus phage Javan48, complete genome	2174-2203	0	1.0
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	MK448749	Streptococcus phage Javan39, complete genome	2174-2203	0	1.0
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	MH853356	Streptococcus phage LF2, partial genome	18636-18665	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448829	Streptococcus phage Javan7, complete genome	16033-16062	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448736	Streptococcus phage Javan35, complete genome	16516-16545	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448781	Streptococcus phage Javan5, complete genome	18538-18567	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MH853355	Streptococcus phage LF1, complete genome	6890-6919	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448911	Streptococcus phage Javan34, complete genome	16516-16545	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448837	Streptococcus phage Javan10, complete genome	14562-14591	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448742	Streptococcus phage Javan37, complete genome	16352-16381	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MH853358	Streptococcus phage LF4, complete genome	6890-6919	0	1.0
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448916	Streptococcus phage Javan36, complete genome	16516-16545	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MK448971	Streptococcus phage Javan52, complete genome	15906-15935	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MK448829	Streptococcus phage Javan7, complete genome	12452-12481	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MH853355	Streptococcus phage LF1, complete genome	3309-3338	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MH853356	Streptococcus phage LF2, partial genome	3481-3510	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MK448837	Streptococcus phage Javan10, complete genome	10978-11007	0	1.0
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MH853358	Streptococcus phage LF4, complete genome	3309-3338	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MK448829	Streptococcus phage Javan7, complete genome	12668-12697	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MK448956	Streptococcus phage Javan48, complete genome	14732-14761	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MK448749	Streptococcus phage Javan39, complete genome	14732-14761	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MH853355	Streptococcus phage LF1, complete genome	3525-3554	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MH853356	Streptococcus phage LF2, partial genome	3265-3294	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MK448837	Streptococcus phage Javan10, complete genome	11194-11223	0	1.0
AP018935_1	1.13\|932742\|30\|AP018935\|CRISPRCasFinder,CRT	932742-932771	30	MH853358	Streptococcus phage LF4, complete genome	3525-3554	0	1.0
AP018935_1	1.14\|932808\|30\|AP018935\|CRISPRCasFinder,CRT	932808-932837	30	MH853356	Streptococcus phage LF2, partial genome	1240-1269	0	1.0
AP018935_1	1.14\|932808\|30\|AP018935\|CRISPRCasFinder,CRT	932808-932837	30	MK448796	Streptococcus phage Javan53, complete genome	19525-19554	0	1.0
AP018935_1	1.14\|932808\|30\|AP018935\|CRISPRCasFinder,CRT	932808-932837	30	MK448851	Streptococcus phage Javan14, complete genome	17045-17074	0	1.0
AP018935_1	1.1\|931950\|30\|AP018935\|CRISPRCasFinder,CRT	931950-931979	30	MK448742	Streptococcus phage Javan37, complete genome	34361-34390	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448946	Streptococcus phage Javan456, complete genome	16605-16634	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448852	Streptococcus phage Javan140, complete genome	13545-13574	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448871	Streptococcus phage Javan196, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448952	Streptococcus phage Javan472, complete genome	13580-13609	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448779	Streptococcus phage Javan497, complete genome	13514-13543	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448961	Streptococcus phage Javan494, complete genome	13698-13727	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448697	Streptococcus phage Javan185, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448968	Streptococcus phage Javan512, complete genome	13514-13543	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448693	Streptococcus phage Javan177, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448766	Streptococcus phage Javan465, complete genome	14665-14694	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448696	Streptococcus phage Javan183, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	NC_009819	Streptococcus phage P9, complete genome	13681-13710	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448797	Streptococcus phage Javan531, complete genome	13514-13543	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448868	Streptococcus phage Javan188, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448866	Streptococcus phage Javan184, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448699	Streptococcus phage Javan189, complete genome	13699-13728	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	NC_004589	Streptococcus prophage 315.6, complete genome	13611-13640	1	0.967
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448867	Streptococcus phage Javan186, complete genome	13699-13728	1	0.967
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448971	Streptococcus phage Javan52, complete genome	5153-5182	1	0.967
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448487	Streptococcus satellite phage Javan419, complete genome	1643-1672	1	0.967
AP018935_1	1.11\|932610\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932610-932639	30	MK448938	Streptococcus phage Javan44, complete genome	16517-16546	1	0.967
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MK448956	Streptococcus phage Javan48, complete genome	14516-14545	1	0.967
AP018935_1	1.12\|932676\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932676-932705	30	MK448749	Streptococcus phage Javan39, complete genome	14516-14545	1	0.967
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK449010	Streptococcus phage Javan90, complete genome	5037-5066	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448969	Streptococcus phage Javan514, complete genome	4082-4111	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448761	Streptococcus phage Javan445, complete genome	4568-4597	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MH892371	Streptococcus phage SW25, complete genome	21121-21150	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448865	Streptococcus phage Javan182, complete genome	3437-3466	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448884	Streptococcus phage Javan246, complete genome	4866-4895	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448980	Streptococcus phage Javan536, complete genome	3981-4010	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448773	Streptococcus phage Javan485, complete genome	4082-4111	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MH892369	Streptococcus phage SW22, complete genome	20753-20782	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448715	Streptococcus phage Javan247, complete genome	3849-3878	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448760	Streptococcus phage Javan443, complete genome	4568-4597	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448950	Streptococcus phage Javan464, complete genome	3652-3681	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448833	Streptococcus phage Javan87, complete genome	5037-5066	2	0.933
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448683	Streptococcus phage Javan149, complete genome	5668-5697	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448784	Streptococcus phage Javan505, complete genome	13874-13903	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448947	Streptococcus phage Javan458, complete genome	13874-13903	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448976	Streptococcus phage Javan528, complete genome	13698-13727	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448689	Streptococcus phage Javan163, complete genome	13873-13902	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448974	Streptococcus phage Javan524, complete genome	13874-13903	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448789	Streptococcus phage Javan513, complete genome	13873-13902	2	0.933
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	MK448678	Streptococcus phage Javan135, complete genome	13489-13518	2	0.933
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448854	Streptococcus phage Javan146, complete genome	6052-6081	2	0.933
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448851	Streptococcus phage Javan14, complete genome	4829-4858	2	0.933
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448796	Streptococcus phage Javan53, complete genome	5477-5506	3	0.9
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MK448933	Streptococcus phage Javan420, complete genome	5232-5261	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448363	Streptococcus satellite phage Javan21, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448502	Streptococcus satellite phage Javan45, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448541	Streptococcus satellite phage Javan56, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448549	Streptococcus satellite phage Javan58, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448412	Streptococcus satellite phage Javan30, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448479	Streptococcus satellite phage Javan41, complete genome	1744-1773	4	0.867
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448472	Streptococcus satellite phage Javan4, complete genome	1744-1773	4	0.867
AP018935_1	1.10\|932544\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932544-932573	30	MK448796	Streptococcus phage Javan53, complete genome	30266-30295	4	0.867
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP028216	Bacillus subtilis strain SRCM102750 plasmid unnamed1, complete sequence	29414-29443	5	0.833
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP035398	Bacillus subtilis strain SRCM103773 plasmid unnamed1, complete sequence	12498-12527	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448393	Streptococcus satellite phage Javan276, complete genome	10967-10996	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448491	Streptococcus satellite phage Javan43, complete genome	3439-3468	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448327	Streptococcus satellite phage Javan13, complete genome	3439-3468	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448380	Streptococcus satellite phage Javan24, complete genome	3439-3468	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448322	Streptococcus satellite phage Javan12, complete genome	3439-3468	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK448824	Streptococcus phage Javan637, complete genome	5897-5926	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK449002	Streptococcus phage Javan642, complete genome	5897-5926	5	0.833
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MK449003	Streptococcus phage Javan648, complete genome	5897-5926	5	0.833
AP018935_1	1.22\|933139\|29\|AP018935\|PILER-CR	933139-933167	29	NC_047897	Lactobacillus phage Lenus, complete genome	65427-65455	5	0.828
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP021753	Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence	17874-17903	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP008791	Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence	198239-198268	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	19049-19078	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	KY940546	Klebsiella pneumoniae plasmid pUCLA3, complete sequence	51191-51220	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP021545	Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence	101263-101292	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP006922	Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence	29619-29648	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP020064	Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence	54414-54443	6	0.8
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	89682-89711	6	0.8
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	AP018278	Calothrix sp. NIES-4101 plasmid plasmid5 DNA, complete genome	31346-31375	6	0.8
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	NC_047897	Lactobacillus phage Lenus, complete genome	65427-65456	6	0.8
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	AP013698	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, * SEQUENCING IN PROGRESS *	17874-17903	6	0.8
AP018935_1	1.22\|933139\|29\|AP018935\|PILER-CR	933139-933167	29	NC_047925	Lactobacillus phage Nyseid, complete genome	67879-67907	6	0.793
AP018935_1	1.22\|933139\|29\|AP018935\|PILER-CR	933139-933167	29	KU052488	Lactobacillus phage SA-C12, complete genome	24549-24577	6	0.793
AP018935_1	1.22\|933139\|29\|AP018935\|PILER-CR	933139-933167	29	AP013698	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, * SEQUENCING IN PROGRESS *	17875-17903	6	0.793
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	823026-823055	7	0.767
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	594683-594712	7	0.767
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1067700-1067729	7	0.767
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NC_021183	Clostridium pasteurianum BC1 plasmid pCLOPA01, complete sequence	2399-2428	7	0.767
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NC_004963	Mycobacterium celatum plasmid pCLP, complete sequence	22482-22511	7	0.767
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	AP013707	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S25-C85, * SEQUENCING IN PROGRESS *	8451-8480	7	0.767
AP018935_1	1.4\|932148\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932148-932177	30	NZ_CP042047	Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence	11156-11185	7	0.767
AP018935_1	1.4\|932148\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932148-932177	30	NC_011774	Bacillus cereus G9842 plasmid pG9842_140, complete sequence	43903-43932	7	0.767
AP018935_1	1.4\|932148\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932148-932177	30	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	259733-259762	7	0.767
AP018935_1	1.4\|932148\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932148-932177	30	MK448931	Streptococcus phage Javan414, complete genome	20096-20125	7	0.767
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	100349-100378	7	0.767
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	31335-31364	7	0.767
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	33023-33052	7	0.767
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	2845-2874	7	0.767
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	2845-2874	7	0.767
AP018935_1	1.7\|932346\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932346-932375	30	MF140432	Arthrobacter phage Teacup, complete genome	55361-55390	7	0.767
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	465384-465413	7	0.767
AP018935_1	1.9\|932478\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932478-932507	30	NZ_AP014818	Geminocystis sp. NIES-3708 plasmid pGM03, complete sequence	7544-7573	7	0.767
AP018935_1	1.9\|932478\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932478-932507	30	MK504443	Lactobacillus phage 521B, complete genome	133148-133177	7	0.767
AP018935_1	1.9\|932478\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932478-932507	30	MK504446	Lactobacillus phage SAC12B, complete genome	132141-132170	7	0.767
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	NC_047925	Lactobacillus phage Nyseid, complete genome	67879-67908	7	0.767
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	KU052488	Lactobacillus phage SA-C12, complete genome	24549-24578	7	0.767
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	MN693473	Marine virus AFVG_25M504, complete genome	22237-22266	7	0.767
AP018935_1	1.22\|933139\|29\|AP018935\|PILER-CR	933139-933167	29	AP018932	Escherichia phage KIT03 DNA, complete sequence	154829-154857	7	0.759
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP035549	Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_89, complete sequence	80741-80770	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	MK356557	Salmonella sp. strain Sa1423 plasmid pSa1423-90k, complete sequence	82219-82248	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP028198	Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_2, complete sequence	21408-21437	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP042632	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence	40469-40498	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP031917	Escherichia coli O45:H2 strain FWSEC0003 plasmid unnamed11, complete sequence	78858-78887	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	LT906557	Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II	62283-62312	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_AP018804	Escherichia coli strain E2863 plasmid pE2863-2, complete sequence	19599-19628	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP021720	Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence	110221-110250	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	CP043746	Escherichia coli strain CVM N16EC0879 plasmid pN16EC0879-2, complete sequence	18595-18624	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP027309	Escherichia coli strain 2015C-3108 plasmid unnamed2, complete sequence	33025-33054	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	CP050999	Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_2	41034-41063	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP011430	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_89, complete sequence	9490-9519	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP032492	Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_91, complete sequence	82529-82558	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP032497	Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_75, complete sequence	9490-9519	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP047663	Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence	62289-62318	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP029365	Escherichia coli strain WCHEC035148 plasmid p1_035148, complete sequence	66067-66096	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP034790	Escherichia coli strain ECCNB20-2 plasmid pTB423, complete sequence	61694-61723	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	NZ_CP020051	Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence	60959-60988	8	0.733
AP018935_1	1.2\|932016\|30\|AP018935\|CRISPRCasFinder,CRT	932016-932045	30	MF356679	Escherichia phage D6, complete genome	81636-81665	8	0.733
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	NZ_CP011023	Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence	32341-32370	8	0.733
AP018935_1	1.3\|932082\|30\|AP018935\|CRISPRCasFinder,CRT	932082-932111	30	MN693812	Marine virus AFVG_250M1204, complete genome	4153-4182	8	0.733
AP018935_1	1.4\|932148\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932148-932177	30	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	74476-74505	8	0.733
AP018935_1	1.5\|932214\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932214-932243	30	MN694433	Marine virus AFVG_250M1159, complete genome	6814-6843	8	0.733
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1259107-1259136	8	0.733
AP018935_1	1.6\|932280\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932280-932309	30	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	864262-864291	8	0.733
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	NC_047866	Aeromonas phage Ahp1, complete genome	4717-4746	8	0.733
AP018935_1	1.19\|933138\|30\|AP018935\|CRISPRCasFinder,CRT	933138-933167	30	AP018932	Escherichia phage KIT03 DNA, complete sequence	154828-154857	8	0.733
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	NZ_CP029363	Streptomyces globisporus strain TFH56 plasmid pTFSG2, complete sequence	29181-29210	9	0.7
AP018935_1	1.8\|932412\|30\|AP018935\|CRISPRCasFinder,CRT,PILER-CR	932412-932441	30	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	715552-715581	9	0.7

1. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

2. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

3. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

4. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

5. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

6. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

7. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

8. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448669 (Streptococcus phage Javan11, complete genome) position: , mismatch: 0, identity: 1.0

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcggtcactcatataagacatctccttt	Protospacer
******************************

9. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
acaccgttgcggttgttgtcggtcactcaa	Protospacer
******************************

10. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
acaccgttgcggttgttgtcggtcactcaa	Protospacer
******************************

11. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
acaccgttgcggttgttgtcggtcactcaa	Protospacer
******************************

12. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

13. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

14. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

15. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

16. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

17. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

18. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

19. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

20. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 0, identity: 1.0

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttctcatctt	Protospacer
******************************

21. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

22. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

23. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

24. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

25. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

26. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
cgtaccatctatcaatttaccgcaagctgt	Protospacer
******************************

27. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

28. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

29. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

30. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

31. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

32. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

33. spacer 1.13|932742|30|AP018935|CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

ccgattatttcctacataatacgcacgttt	CRISPR spacer
ccgattatttcctacataatacgcacgttt	Protospacer
******************************

34. spacer 1.14|932808|30|AP018935|CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

ttctaaatgctggtgactgctttgcataaa	CRISPR spacer
ttctaaatgctggtgactgctttgcataaa	Protospacer
******************************

35. spacer 1.14|932808|30|AP018935|CRISPRCasFinder,CRT matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 0, identity: 1.0

ttctaaatgctggtgactgctttgcataaa	CRISPR spacer
ttctaaatgctggtgactgctttgcataaa	Protospacer
******************************

36. spacer 1.14|932808|30|AP018935|CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 0, identity: 1.0

ttctaaatgctggtgactgctttgcataaa	CRISPR spacer
ttctaaatgctggtgactgctttgcataaa	Protospacer
******************************

37. spacer 1.1|931950|30|AP018935|CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 1, identity: 0.967

atgcggtcactcatataagacatctccttt	CRISPR spacer
atgcgatcactcatataagacatctccttt	Protospacer
*****.************************

38. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

39. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

40. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

41. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

42. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

43. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

44. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

45. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

46. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

47. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

48. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

49. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

50. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

51. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

52. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

53. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

54. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

55. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 1, identity: 0.967

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttacttgaagcagtta	Protospacer
*****************.************

56. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 1, identity: 0.967

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcgttcaatctgttcttgcttttggtcatc	Protospacer
 *****************************

57. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448487 (Streptococcus satellite phage Javan419, complete genome) position: , mismatch: 1, identity: 0.967

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ccgttcaagctgttcttgcttttggtcatc	Protospacer
******** *********************

58. spacer 1.11|932610|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 1, identity: 0.967

agttatcaatgctatatggtttctcatctt	CRISPR spacer
agttatcaatgctatatggtttttcatctt	Protospacer
**********************.*******

59. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 1, identity: 0.967

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
tgtaccatctatcaatttaccgcaagctgt	Protospacer
.*****************************

60. spacer 1.12|932676|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 1, identity: 0.967

cgtaccatctatcaatttaccgcaagctgt	CRISPR spacer
tgtaccatctatcaatttaccgcaagctgt	Protospacer
.*****************************

61. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

62. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

63. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

64. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH892371 (Streptococcus phage SW25, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcttgaaacagaacgggattgatat	Protospacer
*******.**********.***********

65. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

66. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448884 (Streptococcus phage Javan246, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatggaattgacat	Protospacer
*********************.*****.**

67. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448980 (Streptococcus phage Javan536, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcttgaaacagaatggaattgatat	Protospacer
*******.*************.********

68. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

69. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MH892369 (Streptococcus phage SW22, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcttgaaacagaacgggattgatat	Protospacer
*******.**********.***********

70. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448715 (Streptococcus phage Javan247, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaattctgaaacagaatgggattgacat	Protospacer
******.********************.**

71. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

72. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

73. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

74. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 2, identity: 0.933

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatgggatcaatat	Protospacer
************************..****

75. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

76. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

77. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgacttacttgaagcagtta	Protospacer
************ ****.************

78. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

79. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

80. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

81. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 2, identity: 0.933

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
aaaatcagaacgccttactcgaagcagtta	Protospacer
*****************.*.**********

82. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 2, identity: 0.933

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcgttcaatctgttcttgctttttgtcatc	Protospacer
 ********************** ******

83. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 2, identity: 0.933

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ccgttcaagctgttctcgcttttggtcatc	Protospacer
******** *******.*************

84. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 3, identity: 0.9

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcgttcaatctgttcttgcttttgctcgtc	Protospacer
 *********************** **.**

85. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 4, identity: 0.867

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
taaaatcctgaaacagaatggaatcaacat	Protospacer
*********************.**..*.**

86. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448363 (Streptococcus satellite phage Javan21, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

87. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448502 (Streptococcus satellite phage Javan45, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

88. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448541 (Streptococcus satellite phage Javan56, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

89. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448549 (Streptococcus satellite phage Javan58, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

90. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448412 (Streptococcus satellite phage Javan30, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

91. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448479 (Streptococcus satellite phage Javan41, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

92. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448472 (Streptococcus satellite phage Javan4, complete genome) position: , mismatch: 4, identity: 0.867

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttattcaagctgttcttgcttttggtcatc	Protospacer
...***** *********************

93. spacer 1.10|932544|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 4, identity: 0.867

tgaaaacaagcgcaaagctgtcagaaaaca	CRISPR spacer
taacaacaagcgtaaagctgtcagaaaaaa	Protospacer
*.* ********.*************** *

94. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP028216 (Bacillus subtilis strain SRCM102750 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

-taatggtttatctcttttttcatctgttat	CRISPR spacer
ataactg-ttatctattttttcatcttttat	Protospacer
 ***. * ****** *********** ****

95. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP035398 (Bacillus subtilis strain SRCM103773 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

-taatggtttatctcttttttcatctgttat	CRISPR spacer
ataactg-ttatctattttttcatcttttat	Protospacer
 ***. * ****** *********** ****

96. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448393 (Streptococcus satellite phage Javan276, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
tttttcaagctgttcttgctttgggtcatc	Protospacer
.. ***** ************* *******

97. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448491 (Streptococcus satellite phage Javan43, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcaatcaagctgttcttgcttttggttatc	Protospacer
 *. **** *****************.***

98. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448327 (Streptococcus satellite phage Javan13, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcaatcaagctgttcttgcttttggttatc	Protospacer
 *. **** *****************.***

99. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448380 (Streptococcus satellite phage Javan24, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcaatcaagctgttcttgcttttggttatc	Protospacer
 *. **** *****************.***

100. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448322 (Streptococcus satellite phage Javan12, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
gcaatcaagctgttcttgcttttggttatc	Protospacer
 *. **** *****************.***

101. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448824 (Streptococcus phage Javan637, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ccgttcaatctgttcttgcttagcttcgtc	Protospacer
*********************    **.**

102. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK449002 (Streptococcus phage Javan642, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ccgttcaatctgttcttgcttagcttcgtc	Protospacer
*********************    **.**

103. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK449003 (Streptococcus phage Javan648, complete genome) position: , mismatch: 5, identity: 0.833

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ccgttcaatctgttcttgcttagcttcgtc	Protospacer
*********************    **.**

104. spacer 1.22|933139|29|AP018935|PILER-CR matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 5, identity: 0.828

ggttatacatttactaatccatcagcatt	CRISPR spacer
gatggtactgttactaatccatcagcatt	Protospacer
*.* .***  *******************

105. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

106. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP008791 (Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

107. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP025040 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

108. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to KY940546 (Klebsiella pneumoniae plasmid pUCLA3, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

109. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

110. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP006922 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

111. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP020064 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

112. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 6, identity: 0.8

taatggtttatctcttttttcatctgttat	CRISPR spacer
taaacgtttatctcttttttcatcagcact	Protospacer
***  ******************* *.  *

113. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to AP018278 (Calothrix sp. NIES-4101 plasmid plasmid5 DNA, complete genome) position: , mismatch: 6, identity: 0.8

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
cagttcgatctgttcttgctttttaccagc	Protospacer
* ****.**************** ..** *

114. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 6, identity: 0.8

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggatggtactgttactaatccatcagcatt	Protospacer
 *.* .***  *******************

115. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to AP013698 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

-tggttatacatttactaatccatcagcatt	CRISPR spacer
ctcagta-acagttactaatacatcagcatt	Protospacer
 * . ** *** ******** **********

116. spacer 1.22|933139|29|AP018935|PILER-CR matches to NC_047925 (Lactobacillus phage Nyseid, complete genome) position: , mismatch: 6, identity: 0.793

ggttatacatttactaatccatcagcatt	CRISPR spacer
gacggtactgttactaatccatcagcatt	Protospacer
*.. .***  *******************

117. spacer 1.22|933139|29|AP018935|PILER-CR matches to KU052488 (Lactobacillus phage SA-C12, complete genome) position: , mismatch: 6, identity: 0.793

ggttatacatttactaatccatcagcatt	CRISPR spacer
gacggtactgttactaatccatcagcatt	Protospacer
*.. .***  *******************

118. spacer 1.22|933139|29|AP018935|PILER-CR matches to AP013698 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.793

ggtta--tacatttactaatccatcagcatt	CRISPR spacer
--tcagtaacagttactaatacatcagcatt	Protospacer
  *.*   *** ******** **********

119. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 7, identity: 0.767

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
gaccgacgcaatgaccgcgccagaactcgg	Protospacer
  * * .********.********* ****

120. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
gaccgacgcaatgaccgcgccagaactcgg	Protospacer
  * * .********.********* ****

121. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.767

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
gaccgacgcaatgaccgcgccagaactcgg	Protospacer
  * * .********.********* ****

122. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NC_021183 (Clostridium pasteurianum BC1 plasmid pCLOPA01, complete sequence) position: , mismatch: 7, identity: 0.767

taatggtttatctcttttttcatctgttat	CRISPR spacer
tggaagtttatctgttatttcatctgttaa	Protospacer
*.. .******** ** ************

123. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NC_004963 (Mycobacterium celatum plasmid pCLP, complete sequence) position: , mismatch: 7, identity: 0.767

taatggtttatctcttttttcatctgttat	CRISPR spacer
caatggtttttgtcttttttcatctcgtcg	Protospacer
.******** * *************  *

124. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to AP013707 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S25-C85, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taatggtttatctcttttttcatctgttat	CRISPR spacer
taattgtttaactcttttttcatattcttc	Protospacer
**** ***** ************ * .* .

125. spacer 1.4|932148|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042047 (Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence) position: , mismatch: 7, identity: 0.767

aattatcaatgtttacaactgttttagttt	CRISPR spacer
agttatcaatgttttcaactgtttatctgg	Protospacer
*.************ *********   *

126. spacer 1.4|932148|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_011774 (Bacillus cereus G9842 plasmid pG9842_140, complete sequence) position: , mismatch: 7, identity: 0.767

aattatcaatgtttacaactgttttagttt	CRISPR spacer
tcgtatcaatgtttacaactctttgttttt	Protospacer
   ***************** ***   ***

127. spacer 1.4|932148|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 7, identity: 0.767

aattatcaatgtttacaactgttttagttt	CRISPR spacer
aattatcaatgtttaaaactcttattccat	Protospacer
*************** **** ** *  . *

128. spacer 1.4|932148|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK448931 (Streptococcus phage Javan414, complete genome) position: , mismatch: 7, identity: 0.767

aattatcaatgtttacaactgttttagttt	CRISPR spacer
tgtcatcaacgtttgcaactgttttagctg	Protospacer
 .*.*****.****.************.*

129. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 7, identity: 0.767

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
tgctgtcctgaaagagaatgtgattgataa	Protospacer
*.  .******** ****** ********

130. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 7, identity: 0.767

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
tgctgtcctgaaagagaatgtgattgataa	Protospacer
*.  .******** ****** ********

131. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 7, identity: 0.767

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
tgctgtcctgaaagagaatgtgattgataa	Protospacer
*.  .******** ****** ********

132. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 7, identity: 0.767

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
tgctgtcctgaaagagaatgtgattgataa	Protospacer
*.  .******** ****** ********

133. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 7, identity: 0.767

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
tgctgtcctgaaagagaatgtgattgataa	Protospacer
*.  .******** ****** ********

134. spacer 1.7|932346|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MF140432 (Arthrobacter phage Teacup, complete genome) position: , mismatch: 7, identity: 0.767

ccgttcaatctgttcttgcttttggtcatc	CRISPR spacer
ttgttcaatctgttcttgcttctgctggtg	Protospacer
..*******************.** * .*

135. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.767

acaccgttgcggttgttgtcggtcactcaa---	CRISPR spacer
actccgttgcggtggttgtcggt---gcagagt	Protospacer
** ********** *********    **.

136. spacer 1.9|932478|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014818 (Geminocystis sp. NIES-3708 plasmid pGM03, complete sequence) position: , mismatch: 7, identity: 0.767

tctattaacaatagttttatccaattgttt	CRISPR spacer
attattaacaatagttgtatcaaatgctat	Protospacer
 .************** **** ***  * *

137. spacer 1.9|932478|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK504443 (Lactobacillus phage 521B, complete genome) position: , mismatch: 7, identity: 0.767

tctattaacaatagttttatccaattgttt	CRISPR spacer
atgattaacaatagttttatctaagtttat	Protospacer
 . ******************.** * * *

138. spacer 1.9|932478|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MK504446 (Lactobacillus phage SAC12B, complete genome) position: , mismatch: 7, identity: 0.767

tctattaacaatagttttatccaattgttt	CRISPR spacer
atgattaacaatagttttatctaagtttat	Protospacer
 . ******************.** * * *

139. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to NC_047925 (Lactobacillus phage Nyseid, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggacggtactgttactaatccatcagcatt	Protospacer
 *.. .***  *******************

140. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to KU052488 (Lactobacillus phage SA-C12, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggacggtactgttactaatccatcagcatt	Protospacer
 *.. .***  *******************

141. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to MN693473 (Marine virus AFVG_25M504, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
tggtgatacatttactaatcctatgccatc	Protospacer
**** ****************  .. ***.

142. spacer 1.22|933139|29|AP018935|PILER-CR matches to AP018932 (Escherichia phage KIT03 DNA, complete sequence) position: , mismatch: 7, identity: 0.759

ggttatacatttactaatccatcagcatt	CRISPR spacer
ggtaatacatttactaatccaagcgaagg	Protospacer
*** *****************   * *

143. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP035549 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_89, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

144. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to MK356557 (Salmonella sp. strain Sa1423 plasmid pSa1423-90k, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

145. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP028198 (Salmonella enterica subsp. enterica serovar Concord strain CFSAN018747 plasmid pGMI14-002_2, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

146. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP042632 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

147. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP031917 (Escherichia coli O45:H2 strain FWSEC0003 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

148. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to LT906557 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: II) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

149. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_AP018804 (Escherichia coli strain E2863 plasmid pE2863-2, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

150. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP021720 (Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

151. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to CP043746 (Escherichia coli strain CVM N16EC0879 plasmid pN16EC0879-2, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

152. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP027309 (Escherichia coli strain 2015C-3108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

153. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to CP050999 (Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_2) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

154. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP011430 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_89, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

155. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP032492 (Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_91, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

156. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP032497 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_75, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

157. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP047663 (Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

158. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP029365 (Escherichia coli strain WCHEC035148 plasmid p1_035148, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

159. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP034790 (Escherichia coli strain ECCNB20-2 plasmid pTB423, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

160. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP020051 (Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

161. spacer 1.2|932016|30|AP018935|CRISPRCasFinder,CRT matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 8, identity: 0.733

cccagttgcaatgactgcgccagaagtcgg	CRISPR spacer
cctctttgcgatgactgcgccagaagcgca	Protospacer
**.  ****.****************.  .

162. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to NZ_CP011023 (Bacillus pumilus strain SH-B9 plasmid pSHB9, complete sequence) position: , mismatch: 8, identity: 0.733

taatggtttatctcttttttcatctgttat	CRISPR spacer
atgctatttatttcttttttcatctcttat	Protospacer
  .. .*****.************* ****

163. spacer 1.3|932082|30|AP018935|CRISPRCasFinder,CRT matches to MN693812 (Marine virus AFVG_250M1204, complete genome) position: , mismatch: 8, identity: 0.733

taatggtttatctcttttttcatctgttat	CRISPR spacer
acgttttttatctcctttttcatctgtaac	Protospacer
  .*  ********.************ *.

164. spacer 1.4|932148|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.733

aattatcaatgtttacaactgttttagttt	CRISPR spacer
cattatcaatttttacaactgtacttcgat	Protospacer
 ********* *********** .*    *

165. spacer 1.5|932214|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to MN694433 (Marine virus AFVG_250M1159, complete genome) position: , mismatch: 8, identity: 0.733

taaaatcctgaaacagaatgggattgatat	CRISPR spacer
cgtaatcctgcaacagaatggggttggcaa	Protospacer
.. ******* ***********.***..*

166. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.733

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
gatgcaagaacgctttatttgaatcagttt	Protospacer
.* .. *******.********* *****

167. spacer 1.6|932280|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.733

aaaatcagaacgccttatttgaagcagtta	CRISPR spacer
gatgcaagaacgctttatttgaatcagttt	Protospacer
.* .. *******.********* *****

168. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NC_047866 (Aeromonas phage Ahp1, complete genome) position: , mismatch: 8, identity: 0.733

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
tcatcgttgcggttgtcgtcggtcgtgaca	Protospacer
 **.************.*******..   *

169. spacer 1.19|933138|30|AP018935|CRISPRCasFinder,CRT matches to AP018932 (Escherichia phage KIT03 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

tggttatacatttactaatccatcagcatt	CRISPR spacer
gggtaatacatttactaatccaagcgaagg	Protospacer
 *** *****************   * *

170. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029363 (Streptomyces globisporus strain TFH56 plasmid pTFSG2, complete sequence) position: , mismatch: 9, identity: 0.7

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
gggccgttgcggatgttgtcggtcagcagc	Protospacer
. .********* ************ . .

171. spacer 1.8|932412|30|AP018935|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.7

acaccgttgcggttgttgtcggtcactcaa	CRISPR spacer
acaccgttgcgggagttgtcggtgtagtgc	Protospacer
************  *********    ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

40619 : 48725

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG31782.1\|40619_42074_+	Amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-53	32.5
BBG31783.1\|42101_43124_+	Phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.2e-62	42.4
BBG31784.1\|43291_43840_+	Phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.0e-25	35.6
BBG31785.1\|43862_44615_+	hypothetical protein	NA	NA	NA	NA
BBG31786.1\|44634_46182_+	Bifunctional purine biosynthesis protein PurH	Q58MG4	Prochlorococcus_phage	3.9e-78	49.2
BBG31787.1\|46374_47274_+	Glycyl-glycine endopeptidase ALE-1	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
BBG31788.1\|47420_48725_+	hypothetical protein	A0A2D1GNZ3	Streptomyces_phage	3.7e-05	40.5

DBSCAN-SWA_2

604010 : 647008

Streptococcus_phage(97.3%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32330.1\|604010_605879_+	hypothetical protein	E4ZFJ9	Streptococcus_phage	1.1e-303	81.2
BBG32331.1\|606288_606858_+	hypothetical protein	A0A1B0RXB3	Streptococcus_phage	3.8e-87	81.5
BBG32332.1\|606896_608852_-	DNA polymerase I, thermostable	D0R0B0	Streptococcus_phage	0.0e+00	84.5
BBG32333.1\|608901_609066_-	hypothetical protein	NA	NA	NA	NA
BBG32334.1\|609082_609646_-	hypothetical protein	A0A1B0RXA9	Streptococcus_phage	1.6e-90	92.8
BBG32335.1\|609650_610772_-	hypothetical protein	A0A1X9I6D8	Streptococcus_phage	7.2e-199	88.7
BBG32336.1\|610764_611088_-	hypothetical protein	A0A1B0RXB7	Streptococcus_phage	2.0e-32	71.2
BBG32337.1\|611062_611197_-	hypothetical protein	Q6DMW0	Streptococcus_phage	2.1e-12	86.4
BBG32338.1\|611483_613769_+	hypothetical protein	E4ZFK6	Streptococcus_phage	0.0e+00	79.2
BBG32339.1\|614052_614334_+	hypothetical protein	M1PFY8	Streptococcus_phage	6.7e-37	78.5
BBG32340.1\|614314_615691_+	hypothetical protein	A0A1X9I6B0	Streptococcus_phage	5.2e-231	86.2
BBG32341.1\|615683_616181_+	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	4.3e-63	75.0
BBG32342.1\|616573_617611_+	S-adenosylmethionine synthase	E4ZFL0	Streptococcus_phage	2.5e-169	84.6
BBG32343.1\|618266_618722_+	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	5.4e-44	51.0
BBG32344.1\|618693_619950_+	DNA adenine methyltransferase YhdJ	A0A1B0RXE5	Streptococcus_phage	7.5e-221	90.7
BBG32345.1\|619946_621200_+	Modification methylase HhaI	M1NSK8	Streptococcus_phage	1.1e-232	94.0
BBG32346.1\|621277_621532_+	hypothetical protein	NA	NA	NA	NA
BBG32347.1\|621542_621992_+	hypothetical protein	E4ZFL7	Streptococcus_phage	2.1e-16	65.2
BBG32348.1\|622042_622516_+	hypothetical protein	A0A1X9I6K0	Streptococcus_phage	2.3e-85	96.8
BBG32349.1\|622512_624105_+	hypothetical protein	A0A1B0RXJ8	Streptococcus_phage	3.9e-307	95.7
BBG32350.1\|624160_624463_+	hypothetical protein	NA	NA	NA	NA
BBG32351.1\|624462_624768_+	hypothetical protein	NA	NA	NA	NA
BBG32352.1\|624784_625057_+	hypothetical protein	E4ZFM1	Streptococcus_phage	4.1e-07	78.0
BBG32353.1\|625137_626427_+	hypothetical protein	E4ZFM3	Streptococcus_phage	2.0e-229	91.0
BBG32354.1\|626419_627118_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A1B0RXE1	Streptococcus_phage	1.7e-105	83.2
BBG32355.1\|627131_628340_+	hypothetical protein	E4ZFM5	Streptococcus_phage	6.8e-211	91.3
BBG32356.1\|628336_628594_+	hypothetical protein	D0R0D7	Streptococcus_phage	4.3e-30	78.8
BBG32357.1\|628593_628932_+	hypothetical protein	A0A1B0RXE4	Streptococcus_phage	1.2e-37	69.6
BBG32358.1\|628924_629293_+	hypothetical protein	Q6DMT7	Streptococcus_phage	9.1e-34	62.1
BBG32359.1\|629301_629628_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	5.4e-38	67.6
BBG32360.1\|629630_630200_+	hypothetical protein	E4ZFM9	Streptococcus_phage	3.0e-100	97.3
BBG32361.1\|630211_630631_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	9.7e-56	76.3
BBG32362.1\|630925_634045_+	Chromosome partition protein Smc	Q6DMT2	Streptococcus_phage	1.3e-258	78.0
BBG32363.1\|634041_634767_+	hypothetical protein	Q6DMT1	Streptococcus_phage	2.1e-82	58.8
BBG32364.1\|634766_637682_+	hypothetical protein	Q6DMT0	Streptococcus_phage	0.0e+00	64.6
BBG32365.1\|637694_639551_+	hypothetical protein	Q6DMS9	Streptococcus_phage	2.7e-259	73.3
BBG32366.1\|639568_639967_+	hypothetical protein	D0R0E9	Streptococcus_phage	5.1e-38	60.8
BBG32367.1\|639968_641375_+	Exo-glucosaminidase LytG	A0A1B0RXL4	Streptococcus_phage	3.7e-107	63.4
BBG32368.1\|642155_643397_+	Transposon gamma-delta resolvase	A0A1X9I6J1	Streptococcus_phage	3.5e-170	69.2
BBG32369.1\|643359_644646_+	Transposon Tn3 resolvase	E4ZFN9	Streptococcus_phage	1.6e-194	79.8
BBG32370.1\|644715_645489_+	hypothetical protein	NA	NA	NA	NA
BBG32371.1\|645502_647008_+	Serine/threonine-protein kinase PknB	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	3.8e-09	25.1

DBSCAN-SWA_3

761567 : 768344

Staphylococcus_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32482.1\|761567_762740_-	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
BBG32483.1\|763342_764452_+	Riboflavin biosynthesis protein RibD	A0A1V0SE20	Indivirus	4.0e-56	37.4
BBG32484.1\|764432_765083_+	Riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.5e-36	41.5
BBG32485.1\|765100_766294_+	Riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	1.3e-110	50.8
BBG32486.1\|766308_766779_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.3e-40	52.7
BBG32487.1\|766853_768344_-\|tRNA	Lysine--tRNA ligase	A0A1V0SAC0	Catovirus	5.8e-87	38.5

DBSCAN-SWA_4

940908 : 970072

Streptococcus_phage(81.82%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32638.1\|940908_943701_+	Calcium-transporting ATPase 1	M1HK51	Paramecium_bursaria_Chlorella_virus	7.1e-78	29.9
BBG32639.1\|943700_944804_+	hypothetical protein	NA	NA	NA	NA
BBG32640.1\|944924_945563_-	Streptogramin A acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.9e-19	43.4
BBG32641.1\|946273_946885_+	hypothetical protein	M1Q152	Streptococcus_phage	2.7e-54	54.9
BBG32642.1\|947058_948276_-	Transposase from transposon Tn916	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
BBG32643.1\|948357_948561_-	hypothetical protein	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
BBG32644.1\|949021_949252_-	hypothetical protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
BBG32645.1\|949248_949671_-	hypothetical protein	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
BBG32646.1\|950175_950265_+	hypothetical protein	A0A1S5SFA6	Streptococcus_phage	2.7e-08	100.0
BBG32647.1\|950874_952794_-	Tetracycline resistance protein TetM from	A0A1S5SF82	Streptococcus_phage	0.0e+00	100.0
BBG32648.1\|953170_954103_-	hypothetical protein	A0A1S5SF22	Streptococcus_phage	1.1e-171	100.0
BBG32649.1\|954099_955101_-	putative endopeptidase p60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
BBG32650.1\|955097_957275_-	hypothetical protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	99.9
BBG32651.1\|957277_959725_-	hypothetical protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
BBG32652.1\|959708_960215_-	hypothetical protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
BBG32653.1\|960189_960687_-	hypothetical protein	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
BBG32654.1\|960803_961025_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
BBG32655.1\|961067_962273_-	hypothetical protein	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
BBG32656.1\|962450_963836_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	3.2e-265	99.8
BBG32657.1\|963864_964248_-	hypothetical protein	A0A1S5SF96	Streptococcus_phage	2.3e-64	100.0
BBG32658.1\|964266_964581_-	hypothetical protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
BBG32659.1\|964961_965744_-	hypothetical protein	NA	NA	NA	NA
BBG32660.1\|965755_966454_-	SkfA peptide export ATP-binding protein SkfE	A0A2H4PQG7	Staphylococcus_phage	3.2e-19	26.6
BBG32661.1\|966454_966823_-	HTH-type transcriptional repressor YtrA	NA	NA	NA	NA
BBG32662.1\|966967_970072_+	DNA polymerase III subunit alpha	A0A0K1Y8J9	Streptomyces_phage	1.1e-114	28.8

DBSCAN-SWA_5

1084953 : 1092830

Staphylococcus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32777.1\|1084953_1086495_-	putative ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.1e-51	27.8
BBG32778.1\|1086625_1086964_-	Anaerobic ribonucleoside-triphosphate reductase	A0A248SK58	Salicola_phage	1.1e-06	39.1
BBG32779.1\|1087133_1088210_-	Aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
BBG32780.1\|1088547_1089039_+	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	4.6e-81	100.0
BBG32781.1\|1089432_1089717_+	hypothetical protein	A0A1X9I6M5	Streptococcus_phage	2.2e-48	100.0
BBG32782.1\|1090343_1090628_-	hypothetical protein	A0A1X9I6M5	Streptococcus_phage	2.2e-48	100.0
BBG32783.1\|1091156_1091510_-	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	3.9e-42	98.9
BBG32784.1\|1091664_1091949_-	hypothetical protein	A0A1X9I6M5	Streptococcus_phage	2.2e-48	100.0
BBG32785.1\|1092338_1092830_-	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	4.6e-81	100.0

DBSCAN-SWA_6

1284880 : 1294354

Paenibacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32976.1\|1284880_1285171_+	hypothetical protein	A0A0C5AJ30	Paenibacillus_phage	1.3e-19	52.8
BBG32977.1\|1285224_1285968_+	hypothetical protein	A0A2I7SC85	Paenibacillus_phage	5.0e-55	50.0
BBG32978.1\|1286093_1287908_-	DNA polymerase III PolC-type	A0A0A7RWA3	Clostridium_phage	8.5e-32	31.9
BBG32979.1\|1288277_1289717_-	Bifunctional AAC/APH	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
BBG32980.1\|1289717_1290122_-	hypothetical protein	A0A0N7GFH7	Staphylococcus_phage	3.4e-74	100.0
BBG32981.1\|1290166_1291339_-	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
BBG32982.1\|1291487_1292207_+	hypothetical protein	NA	NA	NA	NA
BBG32983.1\|1292401_1293601_-	Tyrosine recombinase XerD	A0A1B0T6A8	Bacillus_phage	6.0e-26	27.8
BBG32984.1\|1293623_1293851_-	hypothetical protein	NA	NA	NA	NA
BBG32985.1\|1294129_1294354_-	HTH-type transcriptional regulator ImmR	X5JA02	Clostridium_phage	4.4e-07	45.9

DBSCAN-SWA_7

1298551 : 1318919

Streptococcus_phage(86.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG32990.1\|1298551_1300681_-	putative cadmium-transporting ATPase	E4ZFI9	Streptococcus_phage	0.0e+00	99.7
BBG32991.1\|1300673_1301042_-	Cadmium resistance transcriptional regulatory	E4ZFI8	Streptococcus_phage	1.4e-63	100.0
BBG32992.1\|1301244_1301544_+	hypothetical protein	Q6DMX6	Streptococcus_phage	5.3e-48	96.0
BBG32993.1\|1301597_1302386_-	hypothetical protein	NA	NA	NA	NA
BBG32994.1\|1302394_1302991_+	hypothetical protein	NA	NA	NA	NA
BBG32995.1\|1303164_1305252_-	Copper-exporting P-type ATPase B	E4ZFI9	Streptococcus_phage	4.5e-61	30.0
BBG32996.1\|1305390_1305597_-	hypothetical protein	NA	NA	NA	NA
BBG32997.1\|1305744_1306221_-	Copper-transporting P-type ATPase	A0A218MNH6	uncultured_virus	5.3e-26	46.5
BBG32998.1\|1306207_1306654_-	Transcriptional repressor CopY	NA	NA	NA	NA
BBG32999.1\|1307111_1307450_-	Cadmium resistance transcriptional regulatory	E4ZFI8	Streptococcus_phage	1.7e-10	33.3
BBG33000.1\|1307462_1308077_-	hypothetical protein	NA	NA	NA	NA
BBG33001.1\|1308150_1309713_-	Transposon Tn3 resolvase	Q6DMS5	Streptococcus_phage	3.2e-213	71.7
BBG33002.1\|1309712_1310546_-	hypothetical protein	M1NSJ1	Streptococcus_phage	9.9e-153	96.0
BBG33003.1\|1310739_1310901_-	hypothetical protein	M1PSL4	Streptococcus_phage	2.3e-18	88.7
BBG33004.1\|1311009_1312479_-	hypothetical protein	A0A1X9I678	Streptococcus_phage	3.5e-262	92.8
BBG33005.1\|1312485_1312881_-	hypothetical protein	A0A1B0RXK5	Streptococcus_phage	3.2e-45	99.2
BBG33006.1\|1312858_1313065_-	hypothetical protein	A0A1B0RXE8	Streptococcus_phage	1.5e-14	92.5
BBG33007.1\|1313701_1314061_+	Cadmium resistance transcriptional regulatory	E4ZFI8	Streptococcus_phage	2.7e-22	47.3
BBG33008.1\|1314057_1316175_+	putative cadmium-transporting ATPase	E4ZFI9	Streptococcus_phage	3.1e-235	62.7
BBG33009.1\|1316877_1317108_+	hypothetical protein	NA	NA	NA	NA
BBG33010.1\|1317220_1317991_-	Inner membrane transport permease YadH	NA	NA	NA	NA
BBG33011.1\|1317983_1318919_-	Daunorubicin/doxorubicin resistance ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.2e-25	31.6

DBSCAN-SWA_8

1354289 : 1372340

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG33047.1\|1354289_1355462_+	hypothetical protein	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
BBG33048.1\|1355445_1356123_-	hypothetical protein	NA	NA	NA	NA
BBG33049.1\|1356138_1357860_-	Type-2 restriction enzyme BsuMI component YdiS	M1NSM1	Streptococcus_phage	1.1e-31	33.7
BBG33050.1\|1357873_1359097_-	Modification methylase HaeIII	G3CB01	Aeropyrum_pernix_spindle-shaped_virus	7.5e-32	28.0
BBG33051.1\|1359115_1360177_-	Modification methylase HaeIII	M1PSQ0	Streptococcus_phage	3.1e-66	42.9
BBG33052.1\|1360169_1360400_-	hypothetical protein	A0A2K5B261	Erysipelothrix_phage	7.5e-10	47.9
BBG33053.1\|1360548_1361208_-	hypothetical protein	NA	NA	NA	NA
BBG33054.1\|1361262_1369611_-	hypothetical protein	A0A248SL14	Klebsiella_phage	6.2e-279	37.1
BBG33055.1\|1369620_1370610_-	Modification methylase HhaI	D2IZY5	Enterococcus_phage	1.1e-76	49.8
BBG33056.1\|1370633_1372340_-	DNA topoisomerase 3	A0A1S5V180	Saudi_moumouvirus	6.1e-24	26.0

DBSCAN-SWA_9

1691001 : 1702519

Streptococcus_phage(91.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBG33369.1\|1691001_1691829_+	Exodeoxyribonuclease	M1PSC0	Streptococcus_phage	4.3e-124	78.0
BBG33370.1\|1691868_1692225_-	Regulatory protein MgsR	M1PLC0	Streptococcus_phage	1.5e-41	71.8
BBG33371.1\|1692226_1692703_-	Methylated-DNA--protein-cysteine	M1PFU9	Streptococcus_phage	1.0e-37	50.3
BBG33372.1\|1692757_1693939_-	Hydroxypyruvate reductase	M1NSB9	Streptococcus_phage	7.0e-168	75.6
BBG33373.1\|1694001_1694550_-	hypothetical protein	M1PSC3	Streptococcus_phage	1.1e-54	58.4
BBG33374.1\|1694617_1695427_-	Phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	1.0e-114	76.7
BBG33375.1\|1695842_1696478_+	CutC-like protein	NA	NA	NA	NA
BBG33376.1\|1696747_1697611_-	Ribosomal RNA small subunit methyltransferase I	M1PLC5	Streptococcus_phage	3.7e-110	70.4
BBG33377.1\|1697616_1697943_-	Initiation-control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
BBG33378.1\|1697972_1698836_-	DNA polymerase III subunit tau	M1NSC1	Streptococcus_phage	5.6e-74	49.7
BBG33379.1\|1698855_1699491_-	Thymidylate kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1
BBG33380.1\|1699699_1700866_+	hypothetical protein	NA	NA	NA	NA
BBG33381.1\|1701130_1701790_-	Inosine-5'-monophosphate dehydrogenase	M1NSC5	Streptococcus_phage	5.2e-64	55.6
BBG33382.1\|1701808_1702519_-	High-affinity branched-chain amino acid	G9BWD6	Planktothrix_phage	4.7e-18	28.5

DBSCAN-SWA_10

2200583 : 2207787

uncultured_Caudovirales_phage(16.67%)