CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
AP018703	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid4 DNA, complete genome	0 crisprs	NA	0	0
AP018702	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid3 DNA, complete genome	0 crisprs	NA	0	0
AP018700	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid1 DNA, complete genome	0 crisprs	NA	0	0
AP018701	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid2 DNA, complete genome	0 crisprs	NA	0	0
AP018699	Lactobacillus curvatus NFH-Km12 DNA, complete genome	2 crisprs	cas3,DEDDh,cas9,cas1,cas2,csn2,DinG,csa3	33	10
AP018704	Lactobacillus curvatus NFH-Km12 plasmid NFH-Km12_plasmid5 DNA, complete genome	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: AP018699_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018699_1

877221-877719

TypeII

Consensus_repeat	Method
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	PILER-CR
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CRISPRCasFinder
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CRT

7 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of AP018699_1

>merge|AP018699|1|877221-877719|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTTACATACATATCATAAACATCTTCATAGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAAAATTATTTAAATATCGTTTGCTTGGTCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTGTGGGTGATACCTGTCAAGCGAATAAAGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACATTGAAACAGGGAACACACTACTCTTTAAGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAACAAAAGAGTATTATTAAGAGTGTAGTAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAATCCAACACTACTAAGTACTAACAGTACTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGGTCGCTAATTTGTCTGACGTATACTTTGTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCTGCT

>AP018699|1|1|877221-877652|PILER-CR
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTACATACATATCATAAACATCTTCATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATTATTTAAATATCGTTTGCTTGGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGTGATACCTGTCAAGCGAATAAAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTGAAACAGGGAACACACTACTCTTTAAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAACAAAAGAGTATTATTAAGAGTGTAGTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATCCAACACTACTAAGTACTAACAGTACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC

>AP018699|1|1|877221-877719|CRISPRCasFinder
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTACATACATATCATAAACATCTTCATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATTATTTAAATATCGTTTGCTTGGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGTGATACCTGTCAAGCGAATAAAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTGAAACAGGGAACACACTACTCTTTAAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAACAAAAGAGTATTATTAAGAGTGTAGTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATCCAACACTACTAAGTACTAACAGTACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GGTCGCTAATTTGTCTGACGTATACTTTGT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCTGCT

>AP018699|1|1|877221-877718|CRT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTACATACATATCATAAACATCTTCATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATTATTTAAATATCGTTTGCTTGGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGTGATACCTGTCAAGCGAATAAAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTGAAACAGGGAACACACTACTCTTTAAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAACAAAAGAGTATTATTAAGAGTGTAGTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATCCAACACTACTAAGTACTAACAGTACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GGTCGCTAATTTGTCTGACGTATACTTTGT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCTGC

Protein	Signature genes	Signature genes Name	Protein_function
AP018699.1\|BBE26070.1\|876522_877194_+\|CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
AP018699.1\|BBE26074.1\|883011_884313_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
AP018699.1\|BBE26061.1\|866077_866308_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371411
AP018699.1\|BBE26068.1\|875337_876243_+\|CRISPR-associated-protein-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
AP018699.1\|BBE26062.1\|866401_867601_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|223843
AP018699.1\|BBE26069.1\|876220_876526_+\|CRISPR-associated-protein-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
AP018699.1\|BBE26079.1\|888832_889297_+\|3-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|238615
AP018699.1\|BBE26067.1\|871000_875107_+\|CRISPR-associated-protein-Csn1	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
AP018699.1\|BBE26072.1\|878350_878863_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
AP018699.1\|BBE26066.1\|870050_870872_+\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
AP018699.1\|BBE26071.1\|877793_878057_+\|transposase	unknown	unknown	gnl\|CDD\|366690
AP018699.1\|BBE26080.1\|889297_890278_+\|3-oxoacyl-ACP-synthase-3	unknown	unknown	gnl\|CDD\|236475
AP018699.1\|BBE26064.1\|868314_869349_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
AP018699.1\|BBE26065.1\|869341_870031_+\|methionine-ABC-transporter-permease-protein	unknown	unknown	gnl\|CDD\|224922
AP018699.1\|BBE26078.1\|887728_888658_+\|transposase	unknown	unknown	gnl\|CDD\|225382
AP018699.1\|BBE26063.1\|867614_867923_+\|glycine-cleavage-system-H-protein	unknown	unknown	gnl\|CDD\|133457
AP018699.1\|BBE26076.1\|885518_886010_+\|nitrogen-fixation-protein-NifU	unknown	unknown	gnl\|CDD\|273918
AP018699.1\|BBE26077.1\|886006_887410_+\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
AP018699.1\|BBE26075.1\|884293_885532_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
AP018699.1\|BBE26073.1\|882216_882999_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473

Protein	Function_ID	Function_description	E-value
AP018699.1\|BBE26070.1\|876522_877194_+\|CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.354e-96
AP018699.1\|BBE26074.1\|883011_884313_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	5.16136e-118
AP018699.1\|BBE26061.1\|866077_866308_+\|hypothetical-protein	gnl\|CDD\|371411	pfam11184, DUF2969, Protein of unknown function (DUF2969). This family of proteins with unknown function appears to be restricted to Lactobacillales.	1.0973e-18
AP018699.1\|BBE26068.1\|875337_876243_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.98976e-91
AP018699.1\|BBE26062.1\|866401_867601_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.16355e-97
AP018699.1\|BBE26069.1\|876220_876526_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.30151e-28
AP018699.1\|BBE26079.1\|888832_889297_+\|3-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|238615	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.	1.02809e-55
AP018699.1\|BBE26067.1\|871000_875107_+\|CRISPR-associated-protein-Csn1	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	9.61903e-145
AP018699.1\|BBE26072.1\|878350_878863_+\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.19448e-31
AP018699.1\|BBE26066.1\|870050_870872_+\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	2.70267e-98
AP018699.1\|BBE26071.1\|877793_878057_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.60174e-09
AP018699.1\|BBE26080.1\|889297_890278_+\|3-oxoacyl-ACP-synthase-3	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	1.2192e-143
AP018699.1\|BBE26064.1\|868314_869349_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.12528e-154
AP018699.1\|BBE26065.1\|869341_870031_+\|methionine-ABC-transporter-permease-protein	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	7.12899e-92
AP018699.1\|BBE26078.1\|887728_888658_+\|transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.43624e-69
AP018699.1\|BBE26063.1\|867614_867923_+\|glycine-cleavage-system-H-protein	gnl\|CDD\|133457	cd06848, GCS_H, Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.	9.44165e-31
AP018699.1\|BBE26076.1\|885518_886010_+\|nitrogen-fixation-protein-NifU	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.11267e-57
AP018699.1\|BBE26077.1\|886006_887410_+\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
AP018699.1\|BBE26075.1\|884293_885532_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
AP018699.1\|BBE26073.1\|882216_882999_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	4.72315e-138

>AP018699.1|BBE26070.1|876522_877194_+|CRISPR-associated-protein-Csn2
MNITFYPYQPFSVQNKKITVCSTSSPEVYTKLIAGMSGAQETVKFSNDQYELMDYSKAVIWGGDVAAINLNHLFQNRLIKKFAADLTDQQRQKLTQLDSEIRSTILDAAFMYELTLDVNQEWDLQRMIKFYNLQFSTAVQHDPYGIIESIVQTAVELNESKIITLINVSHYLSINQFNELVRLVATLNVKLFLIEFSEEVKSDQYQKCCYYHIDNDYVEWRYE
>AP018699.1|BBE26069.1|876220_876526_+|CRISPR-associated-protein-Cas2
MRLLVMFDLPVETSEDRKAYRHFRKALLNEGFLMIQYSVYVRVCVSKQSAQFIENRIAGFTPPAGLVQTLMVTEQQYNKMHFLVGESSDDVRNSAERTLIL
>AP018699.1|BBE26068.1|875337_876243_+|CRISPR-associated-protein-Cas1
MSWRTVVISQHAKVSYSGRKIIVQTKDATHQVPIDDIQILLVATTQAVLTASAITELSEAGAKIIFTGKDGNPTCETIADYPGNRSLASIQQQVEWGTGLKETLWTAIIQAKIAMQIQCAQLLGKDIEDLTTEADAMVFADRTNREAVIARKYFQLVFDKDFVRTEYSPINAALNYGYSLLLSAVNREIVCNGYLTQFGIHHHNGVSDFNLGSDLMEPFRPVIDYWVAHQKFNELTPDVKFGLVELLNLELEYNGQITILRNALTKHVQNCLKFMTTPKEEFEVKVVMTHEVPNNALISHV
>AP018699.1|BBE26067.1|871000_875107_+|CRISPR-associated-protein-Csn1
MSRPYNIGLDIGTSSIGWSVVDDQSKLVSVRGKYGYGVRLYDEGQTAAERRSFRTTRRRLKRRKWRLGLLREIFEPYITPVDDTFFLRQKQSNLSPKDQRKLYPQTSLFNDRTDRAFYDDYPTIYHLRYKLMTEKRQFDIREIYLAMHHIVKYRGHFLNEAPVSSFKSSEINLVAHFDRLNTIFADLFSESGFQLETDKLAEVKALLLDNQQSASNRQRQALSLIYTPSTNKAVEKQNKAIATELLKAILGLKAKFNVLTGIEAEDVKAWTLTFNAENFDEEMVKLESSLDDNAHQIIESLQELYSGVLLAGIVPENQSLSQAMITKYDDHQKHLKMLKAVREALAPEDRQRLKQAYDQYVDGQENTKAYSKEDFYGDITKALKNNPDHPIVSEIKKLIELDQFMPKQRTKDNGAIPHQLHQQELDRIIENQQQYYPWLAELNPNSKRQTVAKYKLDELVAFRVPYYVGPLITAEQQQQSSDAKFAWMIRKAEGQITPWNFDDKVDRQASANEFIKRMTTTDTYLLAEDVLPKQSLIYQRFEVLNELNGLKIDDQPITTELKQAIFTDLFMQKTSVTVKNIQDYLVSEKRYASRPAITGLSDENKFNSRLSTYHDLKTIVGDAVDDVDKQADLEKCIEWSTIFEDGKIYSAKLNEIDWLTDQQRVQLAAKRYRGWGRLSAKLLTQIVNANGQRIMDLLWDTTDNFMRIVHSEDFDKLITEANQMMLAENDVQDVINDLYTSPQNKKALRQILLVVNDIQKAMKGQAPERILIEFAREDEVNPRLSVQRKRQVEQVYQNISNELLNNTEIRNELKDLSNSALSNTRLFLYFMQGGRDMYTGDSLNIDRLSTYDIDHILPQSFIKDNSLDNRVLVSQRMNRSKADQVPTDFTSVELGQKMQIQWEQMLRAGLITKKKYDNLTLNPDHISKYTMKGFINRQLVETRQVIKLATNLLMEQYGEDNIELITVKSGLTHQMRTEFDFPKNRNLNNHHHAFDAYLTAFVGLYLLKRYPKLKPYFVYGEYQKASQQDKWRNFNFLNGLKKDELVDENTEAVIWDKESGLAYLNKIYQFKKILVTREVHENSGALFNQTLYAAKDDKASGQGGKQLIPAKQNRPTALYGGYSGKTVAYMCIVRIKNKKGDLYKVCGVETSWLAQLKQLTDEDSQKAFLKQKISPQFTKVKKQKGTIVKVVEDFEVIAPHILINQRFFDNGQELTLGSATYKHNEQELILDKTAVKLLNGALPLTQSEELAEQVYDEILDQVMHYFPLYDTNQFRAKLSAGKAAFMKLPWKSQWDGNKMVQVGQQVILDRVLIGLHANAAVSDLGILKLTTPFGKLQKSSGIYLSPDTQIIYQSPTGLFERRVALRDL
>AP018699.1|BBE26066.1|870050_870872_+|methionine-ABC-transporter-substrate-binding-protein
MKKRSLGLLAAVFLLAGALAACGNKEAKSDSNTIVVGASAIPHAAILKHIQPELKKEGINLKVKVFSDYVLPNKALASGELDANYYQHKPFLKKANKDNGYDLVSVGSIHLEPLGLYSKQVKKLSDVKSGAKVLVSSSQPDWGRVLTILKDGGLITLKSGVNAENATFKDIASNPKHLKFEYTFEPKLMPELLKNDEGTLVAINSNYAVQAGLNPEKDAVALEKQSSPFANIVVTNKKDRNNPAIEKLVKALKSKSTQEWIKNKWHGAVLPVE
>AP018699.1|BBE26065.1|869341_870031_+|methionine-ABC-transporter-permease-protein
MDNVNGFQSYFQFKQVNWPSMWQATFETVWLTIVSVLLVAVLGFALGLVLYQTNASGGRVNRLLNGIVALLVNVFRSIPFIILIVLLIPLTKGLMGTMIGPKAAIPALIISAAPFYARLVELAFREVDGGVLEATRSMGASKVQIVWQVLLPESMPALVSGLTVTAISLVGYTAMAGVIGAGGLGNLAYQDGFQANQNAITLVATVIILIIVFICQKTGDLVVQHIDHR
>AP018699.1|BBE26064.1|868314_869349_+|methionine-ABC-transporter-ATP-binding-protein
MLTLKQVGKTFEREQKTFAALTDVSLNIEAGEIYGIIGYSGAGKSTLIRLLNGLEKPTTGDVLVEGQSIVGLSEQAMRPIRQKIGMIFQHFNLLWSKTVLENIMLPLKLAGVPKAERQIKARALLKIVELTHLEAAYPSELSGGQKQRVAIARALISDPKILLCDEATSALDPKTTNSILTLLAKINREMGITIVLVTHEMDAVRRICQRIAVMENGRLIEEGTVHEIFEKPQMAATKAFVAESLVVSPSETAASIDQLLERVPNGTIVQLRFNEEQSSQPVIGRLMRQYPAVEISVISGSLQQTINGALGYLYIQIQANPSDLKAVLAELAQQTIEVEVVRHG
>AP018699.1|BBE26063.1|867614_867923_+|glycine-cleavage-system-H-protein
MTMNNNDYFWTEEIAASIRRIGITKAAQNEFGLIKFVDVPIVGQKLTANETLVAIEAEKMVQDLDSPLAGELVNVNTPLADNPELLNADNEKDAWIADIRVD
>AP018699.1|BBE26062.1|866401_867601_+|rod-shape-determining-protein-RodA
MPKEVETTEDSSRVDYGIVFSVFMLALIGLMSIYVATSHDTSGASSTRAVIMQAAWYVIGGIAIVAIMQFDSEQLWRIAPLAYGLGIFLLIAVLIFYNRAVALQTGAKSWFSLGPISFQPSEVMKPAYILMLGRVVTQHNTAYPEHTIKTDWMLLGRMLLWTLPVMVLLKLQNDFGTLLVFVAILGGIVLVSGVTWKILAPAIAVLVAVGGTALTLAATTPGRVILTHLGFKTYQFNRIDAWLHPFDNTASTSLQLSQSLKAIGSGQLFGKGFNQVQVHVPVRESDMIFSVIGENFGFVGSCFVILLYFLLIYQMIRVTFDTKNEFYAYVSTGVIMMILFHVFENIGMSVGLLPLTGIPLPFISQGGSSLLGNLIGVGFIMSMRYHYKSYMFSEAEDTF
>AP018699.1|BBE26061.1|866077_866308_+|hypothetical-protein
MSKKEQKITVTIDDIKRNGQEMTSVMVGKNEIGVIVEDSAKKRFEATVEGTGQSIITKTHDDAVNELLREYHLHQG
>AP018699.1|BBE26071.1|877793_878057_+|transposase
MKRYQDDFKASIVKMHREEKRSIRSLSEEYGVSPAAIHNWVKGAKSVELEDGTEVTSKEFKQLQKENQRLKEELEILKAAAVLLGKH
>AP018699.1|BBE26072.1|878350_878863_+|hypothetical-protein
MNRRFKKPGTHVDHSQRPNLIKHQPNARIWRADITYLELRPGTWVYLSSIYEPKVHQVLAFKIGRQMEATLVVETINQALECHQKPQYFHSDMGSQYTSNEVETLLERHQISHSYSKQGYPYDNGPIEAFHSLLKREFAFQTTFSNFEDLVIRTSNYISWFNSDRIRTSV
>AP018699.1|BBE26073.1|882216_882999_+|Fe-S-cluster-assembly-ATPase-SufC
MSKLEIIDLHVGIDGKEILKGVNLEMNTGEIHAIMGPNGTGKSTLSETIMGNPKYEVLQGQIKLDGQNILQMPVDERARAGLFLAMQYPAEIQGITNAEFMRAAINARRAEDDQISVMAFLKKLDQRMAFLDMTEEMSERYLNEGFSGGEKKRNEILQLMMIEPKFAILDEIDSGLDIDALQVVSKGVNEMRGADFGSLIITHYQRLLNYIVPDYVHIMMGGKIVTTGDASLAKRLEDEGYVGIRDELGLDIKLTDDESK
>AP018699.1|BBE26074.1|883011_884313_+|Fe-S-cluster-assembly-protein-SufD
MKKTLAITPEQIASFSQLHQEPAWFAEMRQAAFAQIEQLELPIFEKINYKHWPVMAANAPTAVKSDLSLMPSAAANLSADQPYAVQIGQTTAKLNLPAELAEQGVIFTDIFTALQEHPDLVQQYYMQVTVKPNEDRLTAFHTALMNSGLFLYVPKNVVIKQPITAYYVQDSTQPADFIHHVLVVAEQNSEFSYLENLQTAGDHKNLANVVVEVIAKDNSHVHFSAVDAFGKSVTTYLNRRGHLMRDARIDWALGSMNDGNIIGDFDSDLVGAGSHAETKVVAISTGKQIQGIDTRVTNIGPRSIGHILQHGVILEDATLTFNGIGHILKGAKGADAQQENRVLMLSRTARGDANPLLLIDENDVQAGHAASVGRVDEQQMYYLMSRGLSKEVAQRLVIRGFLGAVLSEIPDKNVRQQLTDTIERKLIDGQPVK
>AP018699.1|BBE26075.1|884293_885532_+|cysteine-desulfurase
MVNQLNDYRCDFPILDQIVNDEPLVYLDNAATTQKPQAVIDRLVAYYQNDNANVHRGVHTLAERATAQYEAARTKVQTFIHAAASAEVIFTKGTTQSLNWVAGSFGPTVVEAGDEIMISVMEHHSNLVPWQQLAQKTGAKLRYIDLLPDGQLDLESARQVIGPKTKIVSLAHASNVLGVVNPIKTIAALVHAQGGYMVVDGAQAVPHMMVDVQALDADFYAFSGHKMLGPTGIGVLYGKQALLEQMPPVEYGGEMIDFVGLQSSTFKELPWRLEGGTPNIAGAIGLGAAIDYLTQIGMDHIQAHEQALVTMALPQLQAIDGLTIYGPQDAAQRTGVIAFNLDNLHPHDLATALDMEGVAVRAGHHCAQPLMQWLNVAATARASFYLYNTEADVKTFVTAIQAAKEFFQNGTL
>AP018699.1|BBE26076.1|885518_886010_+|nitrogen-fixation-protein-NifU
MALSKLDNLYRQVILDHSQHPHHHGHLTTADHEIELRNPTCGDVLQLELVLEDGQISQIAFSGEGCTISQASASMMTDAVMHKTPAQAEAMIERFSDMMIGDRDEDWSLLEDAAILQGVQQFPARIKCANLAWKALHKALNSDDRRATTGQMMNHAETEETNE
>AP018699.1|BBE26077.1|886006_887410_+|Fe-S-cluster-assembly-protein-SufB
MTEETTMPQFEEYDYGFSDDVEPVFSTGRGLTEDVVRAISREKKEPQWMLDFRLKSFHAYEKMPMPDFGPDLSDLDLEHMLYYQKATDKQYRDWEDVPDKIKETFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDMDTGLREYPEIVKEYFSTLVKPTDNKFSALNSAVWSGGTFIYVPKGVRTDIPIQSYFRINAENSGQFERTLIIVDEGASVNYVEGCTAPSYSSDSLHAAVVEVFVKRDGYCRYTTIQNWSKNVYSLETKRAQAMENATMEWVDGNLGSKMTMKYPSVYLDGEGARGTMLSIAVAGEGVDQDSGARMIHAAPNTSSSIVSKSIAKDGGAVDYRGTVRFERDSDGSFAHVECDTIIMDDRSSSDTIPYNTILNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAVELNRLISYEMEGSVG
>AP018699.1|BBE26078.1|887728_888658_+|transposase
MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRKRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
>AP018699.1|BBE26079.1|888832_889297_+|3-hydroxyacyl-ACP-dehydratase
MTRLNTTEIMALIPNRYPIIYIDTVESLVPGQEVVAVKNVTINEQFMRGYRPDAPQMPNTLMIEALAQTASILILKSPEFFGKTAYLGAAKNVVFNRVILPGDQIKFTVTLTKKKENMGVVQTHATVNDQVVCEAELTFVVAPRDDLLKSQQAT
>AP018699.1|BBE26080.1|889297_890278_+|3-oxoacyl-ACP-synthase-3
MAYRIIATASAVPDKIVTNDDLAEILETSNDWIESRTGIIERHMAVDENTSDLCYRVAEKLLAQANVAPEQIKAIIVATMTPDYYTPATAAIVQGKLGATHAFAFDISAACSGFTYALSVARGYIQFSTDYVLVIGGEVTSKVLDWSDRSSAVLFGDGAAGVLLQGTSAEPDGWYGEQLLTIGSQSEQLTSGYTPVTQANFGQVGQTHIQSSFFQMSGQAIYQFSTRQVPQAIETAVLAAGLSLDQVDHFLVHQANARLITRMASKLNQQLSKFPMNLQHYGNTSAASIPLLLAEQVATGQIKRGDLCVLCGFGGGLTIGIQIIQY

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Crispr_ID: AP018699_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

AP018699_2

878932-882069

TypeII

Consensus_repeat	Method
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	PILER-CR
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CRISPRCasFinder
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CRT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	PILER-CR

47 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of AP018699_2

>merge|AP018699|2|878932-882069|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAATATGCCCTTAATCCCACCAATCGCCGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCAAAAACAGTCTTCTTAGTCCGATACCGATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTATCAGAAATAAACGAAAGCTGTTTAATGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGAAGTCTCGGCGTACGACTCTGTGTGGCTTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTCACAGTTACTATGGAGGGCAATCGTGTCAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCGCAGAAGTTAAACGTAAGCGTAAGTACGTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTCAACATGTTCCATTGACCGCCCTTCAAGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTCGGCAAACTGTAAACAAGCGCGGTTCTTGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCGCCTCAGAATCTTCTGGGTCATTATTATAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGTTTCTTCCGGAAGTAAAGTAGAAGTACTGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAAAAAAATAAGTGAATTAAAAAGCTACGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCTATTACCGGTAACTTCGTTGCACGTGGTGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGTGTTCTAAACTGGTCGATTTCGACGGGTTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAGTCTTAATAGAATAAGGGTAACATGCAATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAGATCAACTAGCACAGTTGTGGAGAGACGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAACCGCACCCTCATTATCACTGTTTACGATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTTGAAGACAGGGAAGCATATCAGCTTATTAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGTCCATGTTTACTCGATTGGCAACTAGTGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAAATAAGTTCCAATCTTCTTAATACCACTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAATAACTGCCGTCCCGTCGTTGTCGTCGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACATTTATGGTCGTAGTTATATGTTTCTATATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCTGATTGCGCTGATTCAGATGATGTCATGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAAGACCGGGATAAGTACGTCGTTATTAATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGCTAAGTTGACATAAGCTGCATAATCTTTGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTGTGGGAGTTGAAACACTTAGCAGTTCAGAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCCAGCGTAATAAGTTTTTCCATCAGCGCCTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAAAATCTATTTGGGATAAAAAATATTAGGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTACGTTGTGTTCCTTATCCTAAGCAGCTTAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAAGAAAGGAATGGCAAAACATGGAAGAAAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAAAATCTATTTGGGATAAAAAATATTAGGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTACGTTGTGTTCCTTATCCTAAGCAGCTTAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAAATCAAAATCGACACCAAAAACTTAAGTCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAACACCAGTTGGCTGTTTAACCCCAGTACCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAATACAATCGGCAATCACCACCTTTACTTTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGCTGCTAAGGCATACCGGAGCTACCATGCAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGTAAAATCTAGTTATTTTACCGGGGATAGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACTAAGAAAGGAATGGCAAAACATGGAAGAAAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAGGTGATTAATATGCAAGTAATCGAAATAGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCCCATCGAACTTGAGAGTGCGAAGAAAACAGGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCATCAAGAATAATTTGTTCAATGTTCACATGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACGTAAAATCTAGTTATTTTACCGGGGATAGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACACTTTGAGGTTCATCCCAGATTCGTGTTGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCTCACCATCTCTCATTGGTCTAGTGGTATTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACAGTTCACCTTCAGGTAGCTTCTTTGTTCAAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCGACGACTTACCATTCTAGGGGGTGGCAGCGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCAGAAGAGTTTGACAAAGCTAACCCGTCAAGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCCTATGGGACGGCTTGTCCGATGGTTGAACGTTTTAGAAGAGTATCAAATCAATAAGTTATTTTTT

>AP018699|2|2|878932-879297|PILER-CR
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATATGCCCTTAATCCCACCAATCGCCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAAAAACAGTCTTCTTAGTCCGATACCGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TATCAGAAATAAACGAAAGCTGTTTAATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GAAGTCTCGGCGTACGACTCTGTGTGGCTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCACAGTTACTATGGAGGGCAATCGTGTCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCGCAGAAGTTAAACGTAAGCGTAAGTACGTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCAACATGTTCCATTGACCGCCCTTCAAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCGGCAAACTGTAAACAAGCGCGGTTCTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCCTCAGAATCTTCTGGGTCATTATTATA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTTTCTTCCGGAAGTAAAGTAGAAGTACTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAAAAAATAAGTGAATTAAAAAGCTACG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTATTACCGGTAACTTCGTTGCACGTGGTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTGTTCTAAACTGGTCGATTTCGACGGGTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTCTTAATAGAATAAGGGTAACATGCAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGATCAACTAGCACAGTTGTGGAGAGACGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACCGCACCCTCATTATCACTGTTTACGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTGAAGACAGGGAAGCATATCAGCTTATTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTCCATGTTTACTCGATTGGCAACTAGTGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAATAAGTTCCAATCTTCTTAATACCACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAATAACTGCCGTCCCGTCGTTGTCGTCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTTATGGTCGTAGTTATATGTTTCTATAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTGATTGCGCTGATTCAGATGATGTCATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGACCGGGATAAGTACGTCGTTATTAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTAAGTTGACATAAGCTGCATAATCTTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGAGTTGAAACACTTAGCAGTTCAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCAGCGTAATAAGTTTTTCCATCAGCGCCT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATCAAAATCGACACCAAAAACTTAAGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACACCAGTTGGCTGTTTAACCCCAGTACC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATACAATCGGCAATCACCACCTTTACTTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTGCTAAGGCATACCGGAGCTACCATGCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGGTGATTAATATGCAAGTAATCGAAATAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCCATCGAACTTGAGAGTGCGAAGAAAACAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CATCAAGAATAATTTGTTCAATGTTCACAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ACTTTGAGGTTCATCCCAGATTCGTGTTGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTCACCATCTCTCATTGGTCTAGTGGTATT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTTCACCTTCAGGTAGCTTCTTTGTTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGACGACTTACCATTCTAGGGGGTGGCAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAGAAGAGTTTGACAAAGCTAACCCGTCAA


>AP018699|2|2|878932-882069|CRISPRCasFinder
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATATGCCCTTAATCCCACCAATCGCCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAAAAACAGTCTTCTTAGTCCGATACCGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TATCAGAAATAAACGAAAGCTGTTTAATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GAAGTCTCGGCGTACGACTCTGTGTGGCTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCACAGTTACTATGGAGGGCAATCGTGTCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCAGAAGTTAAACGTAAGCGTAAGTACGT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCAACATGTTCCATTGACCGCCCTTCAAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCGGCAAACTGTAAACAAGCGCGGTTCTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCCTCAGAATCTTCTGGGTCATTATTATA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTTTCTTCCGGAAGTAAAGTAGAAGTACTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAAAAAATAAGTGAATTAAAAAGCTACG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTATTACCGGTAACTTCGTTGCACGTGGTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTGTTCTAAACTGGTCGATTTCGACGGGTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTCTTAATAGAATAAGGGTAACATGCAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGATCAACTAGCACAGTTGTGGAGAGACGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACCGCACCCTCATTATCACTGTTTACGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTGAAGACAGGGAAGCATATCAGCTTATTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTCCATGTTTACTCGATTGGCAACTAGTGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAATAAGTTCCAATCTTCTTAATACCACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAATAACTGCCGTCCCGTCGTTGTCGTCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTTATGGTCGTAGTTATATGTTTCTATAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTGATTGCGCTGATTCAGATGATGTCATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGACCGGGATAAGTACGTCGTTATTAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTAAGTTGACATAAGCTGCATAATCTTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGAGTTGAAACACTTAGCAGTTCAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCAGCGTAATAAGTTTTTCCATCAGCGCCT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATCAAAATCGACACCAAAAACTTAAGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACACCAGTTGGCTGTTTAACCCCAGTACC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATACAATCGGCAATCACCACCTTTACTTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTGCTAAGGCATACCGGAGCTACCATGCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGGTGATTAATATGCAAGTAATCGAAATAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCCATCGAACTTGAGAGTGCGAAGAAAACAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CATCAAGAATAATTTGTTCAATGTTCACAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ACTTTGAGGTTCATCCCAGATTCGTGTTGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTCACCATCTCTCATTGGTCTAGTGGTATT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTTCACCTTCAGGTAGCTTCTTTGTTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGACGACTTACCATTCTAGGGGGTGGCAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAGAAGAGTTTGACAAAGCTAACCCGTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCTATGGGACGGCTTGTCCGATGGTTGAAC
GTTTTAGAAGAGTATCAAATCAATAAGTTATTTTTT

>AP018699|2|2|878932-882069|CRT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATATGCCCTTAATCCCACCAATCGCCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAAAAACAGTCTTCTTAGTCCGATACCGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TATCAGAAATAAACGAAAGCTGTTTAATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GAAGTCTCGGCGTACGACTCTGTGTGGCTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCACAGTTACTATGGAGGGCAATCGTGTCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCAGAAGTTAAACGTAAGCGTAAGTACGT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCAACATGTTCCATTGACCGCCCTTCAAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCGGCAAACTGTAAACAAGCGCGGTTCTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCCTCAGAATCTTCTGGGTCATTATTATA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTTTCTTCCGGAAGTAAAGTAGAAGTACTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAAAAAATAAGTGAATTAAAAAGCTACG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTATTACCGGTAACTTCGTTGCACGTGGTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTGTTCTAAACTGGTCGATTTCGACGGGTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTCTTAATAGAATAAGGGTAACATGCAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGATCAACTAGCACAGTTGTGGAGAGACGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACCGCACCCTCATTATCACTGTTTACGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTGAAGACAGGGAAGCATATCAGCTTATTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTCCATGTTTACTCGATTGGCAACTAGTGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAATAAGTTCCAATCTTCTTAATACCACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAATAACTGCCGTCCCGTCGTTGTCGTCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTTATGGTCGTAGTTATATGTTTCTATAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTGATTGCGCTGATTCAGATGATGTCATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGACCGGGATAAGTACGTCGTTATTAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTAAGTTGACATAAGCTGCATAATCTTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGAGTTGAAACACTTAGCAGTTCAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCAGCGTAATAAGTTTTTCCATCAGCGCCT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATCAAAATCGACACCAAAAACTTAAGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACACCAGTTGGCTGTTTAACCCCAGTACC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATACAATCGGCAATCACCACCTTTACTTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTGCTAAGGCATACCGGAGCTACCATGCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGGTGATTAATATGCAAGTAATCGAAATAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCCATCGAACTTGAGAGTGCGAAGAAAACAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CATCAAGAATAATTTGTTCAATGTTCACAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ACTTTGAGGTTCATCCCAGATTCGTGTTGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTCACCATCTCTCATTGGTCTAGTGGTATT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTTCACCTTCAGGTAGCTTCTTTGTTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGACGACTTACCATTCTAGGGGGTGGCAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAGAAGAGTTTGACAAAGCTAACCCGTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCTATGGGACGGCTTGTCCGATGGTTGAAC
GTTTTAGAAGAGTATCAAATCAATAAGTTATTTTTT

>AP018699|2|3|879328-882003|PILER-CR
	AAATATGCCCTTAATCCCACCAATCGCCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAAAAACAGTCTTCTTAGTCCGATACCGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TATCAGAAATAAACGAAAGCTGTTTAATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GAAGTCTCGGCGTACGACTCTGTGTGGCTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCACAGTTACTATGGAGGGCAATCGTGTCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAACCGCAGAAGTTAAACGTAAGCGTAAGTACGTGTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCAACATGTTCCATTGACCGCCCTTCAAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TCGGCAAACTGTAAACAAGCGCGGTTCTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGCCTCAGAATCTTCTGGGTCATTATTATA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTTTCTTCCGGAAGTAAAGTAGAAGTACTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAAAAAATAAGTGAATTAAAAAGCTACG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTATTACCGGTAACTTCGTTGCACGTGGTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTGTTCTAAACTGGTCGATTTCGACGGGTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTCTTAATAGAATAAGGGTAACATGCAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGATCAACTAGCACAGTTGTGGAGAGACGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACCGCACCCTCATTATCACTGTTTACGAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TTGAAGACAGGGAAGCATATCAGCTTATTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTCCATGTTTACTCGATTGGCAACTAGTGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAATAAGTTCCAATCTTCTTAATACCACT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAATAACTGCCGTCCCGTCGTTGTCGTCGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ATTTATGGTCGTAGTTATATGTTTCTATAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTGATTGCGCTGATTCAGATGATGTCATGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGACCGGGATAAGTACGTCGTTATTAAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTAAGTTGACATAAGCTGCATAATCTTTG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TGTGGGAGTTGAAACACTTAGCAGTTCAGA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCAGCGTAATAAGTTTTTCCATCAGCGCCT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAAAATCTATTTGGGATAAAAAATATTAGG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TACGTTGTGTTCCTTATCCTAAGCAGCTTA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AAATCAAAATCGACACCAAAAACTTAAGTC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AACACCAGTTGGCTGTTTAACCCCAGTACC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AATACAATCGGCAATCACCACCTTTACTTT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GCTGCTAAGGCATACCGGAGCTACCATGCA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	TAAGAAAGGAATGGCAAAACATGGAAGAAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGGTGATTAATATGCAAGTAATCGAAATAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CCCATCGAACTTGAGAGTGCGAAGAAAACAG
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CATCAAGAATAATTTGTTCAATGTTCACAT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	GTAAAATCTAGTTATTTTACCGGGGATAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	ACTTTGAGGTTCATCCCAGATTCGTGTTGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CTCACCATCTCTCATTGGTCTAGTGGTATT
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	AGTTCACCTTCAGGTAGCTTCTTTGTTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CGACGACTTACCATTCTAGGGGGTGGCAGC
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC	CAGAAGAGTTTGACAAAGCTAACCCGTCAA
GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
AP018699.1\|BBE26070.1\|876522_877194_+\|CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
AP018699.1\|BBE26074.1\|883011_884313_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
AP018699.1\|BBE26081.1\|890301_890541_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
AP018699.1\|BBE26068.1\|875337_876243_+\|CRISPR-associated-protein-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
AP018699.1\|BBE26072.1\|878350_878863_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222853
AP018699.1\|BBE26069.1\|876220_876526_+\|CRISPR-associated-protein-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
AP018699.1\|BBE26082.1\|890545_891481_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
AP018699.1\|BBE26067.1\|871000_875107_+\|CRISPR-associated-protein-Csn1	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
AP018699.1\|BBE26078.1\|887728_888658_+\|transposase	unknown	unknown	gnl\|CDD\|225382
AP018699.1\|BBE26066.1\|870050_870872_+\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
AP018699.1\|BBE26071.1\|877793_878057_+\|transposase	unknown	unknown	gnl\|CDD\|366690
AP018699.1\|BBE26080.1\|889297_890278_+\|3-oxoacyl-ACP-synthase-3	unknown	unknown	gnl\|CDD\|236475
AP018699.1\|BBE26064.1\|868314_869349_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
AP018699.1\|BBE26063.1\|867614_867923_+\|glycine-cleavage-system-H-protein	unknown	unknown	gnl\|CDD\|133457
AP018699.1\|BBE26079.1\|888832_889297_+\|3-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|238615
AP018699.1\|BBE26065.1\|869341_870031_+\|methionine-ABC-transporter-permease-protein	unknown	unknown	gnl\|CDD\|224922
AP018699.1\|BBE26076.1\|885518_886010_+\|nitrogen-fixation-protein-NifU	unknown	unknown	gnl\|CDD\|273918
AP018699.1\|BBE26077.1\|886006_887410_+\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
AP018699.1\|BBE26075.1\|884293_885532_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
AP018699.1\|BBE26073.1\|882216_882999_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473

Protein	Function_ID	Function_description	E-value
AP018699.1\|BBE26070.1\|876522_877194_+\|CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.354e-96
AP018699.1\|BBE26074.1\|883011_884313_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	5.16136e-118
AP018699.1\|BBE26081.1\|890301_890541_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.66737e-16
AP018699.1\|BBE26068.1\|875337_876243_+\|CRISPR-associated-protein-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.98976e-91
AP018699.1\|BBE26072.1\|878350_878863_+\|hypothetical-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.19448e-31
AP018699.1\|BBE26069.1\|876220_876526_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	5.30151e-28
AP018699.1\|BBE26082.1\|890545_891481_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	2.26893e-73
AP018699.1\|BBE26067.1\|871000_875107_+\|CRISPR-associated-protein-Csn1	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	9.61903e-145
AP018699.1\|BBE26078.1\|887728_888658_+\|transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.43624e-69
AP018699.1\|BBE26066.1\|870050_870872_+\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	2.70267e-98
AP018699.1\|BBE26071.1\|877793_878057_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.60174e-09
AP018699.1\|BBE26080.1\|889297_890278_+\|3-oxoacyl-ACP-synthase-3	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	1.2192e-143
AP018699.1\|BBE26064.1\|868314_869349_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.12528e-154
AP018699.1\|BBE26063.1\|867614_867923_+\|glycine-cleavage-system-H-protein	gnl\|CDD\|133457	cd06848, GCS_H, Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.	9.44165e-31
AP018699.1\|BBE26079.1\|888832_889297_+\|3-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|238615	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.	1.02809e-55
AP018699.1\|BBE26065.1\|869341_870031_+\|methionine-ABC-transporter-permease-protein	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	7.12899e-92
AP018699.1\|BBE26076.1\|885518_886010_+\|nitrogen-fixation-protein-NifU	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.11267e-57
AP018699.1\|BBE26077.1\|886006_887410_+\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
AP018699.1\|BBE26075.1\|884293_885532_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
AP018699.1\|BBE26073.1\|882216_882999_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	4.72315e-138

>AP018699.1|BBE26072.1|878350_878863_+|hypothetical-protein
MNRRFKKPGTHVDHSQRPNLIKHQPNARIWRADITYLELRPGTWVYLSSIYEPKVHQVLAFKIGRQMEATLVVETINQALECHQKPQYFHSDMGSQYTSNEVETLLERHQISHSYSKQGYPYDNGPIEAFHSLLKREFAFQTTFSNFEDLVIRTSNYISWFNSDRIRTSV
>AP018699.1|BBE26071.1|877793_878057_+|transposase
MKRYQDDFKASIVKMHREEKRSIRSLSEEYGVSPAAIHNWVKGAKSVELEDGTEVTSKEFKQLQKENQRLKEELEILKAAAVLLGKH
>AP018699.1|BBE26070.1|876522_877194_+|CRISPR-associated-protein-Csn2
MNITFYPYQPFSVQNKKITVCSTSSPEVYTKLIAGMSGAQETVKFSNDQYELMDYSKAVIWGGDVAAINLNHLFQNRLIKKFAADLTDQQRQKLTQLDSEIRSTILDAAFMYELTLDVNQEWDLQRMIKFYNLQFSTAVQHDPYGIIESIVQTAVELNESKIITLINVSHYLSINQFNELVRLVATLNVKLFLIEFSEEVKSDQYQKCCYYHIDNDYVEWRYE
>AP018699.1|BBE26069.1|876220_876526_+|CRISPR-associated-protein-Cas2
MRLLVMFDLPVETSEDRKAYRHFRKALLNEGFLMIQYSVYVRVCVSKQSAQFIENRIAGFTPPAGLVQTLMVTEQQYNKMHFLVGESSDDVRNSAERTLIL
>AP018699.1|BBE26068.1|875337_876243_+|CRISPR-associated-protein-Cas1
MSWRTVVISQHAKVSYSGRKIIVQTKDATHQVPIDDIQILLVATTQAVLTASAITELSEAGAKIIFTGKDGNPTCETIADYPGNRSLASIQQQVEWGTGLKETLWTAIIQAKIAMQIQCAQLLGKDIEDLTTEADAMVFADRTNREAVIARKYFQLVFDKDFVRTEYSPINAALNYGYSLLLSAVNREIVCNGYLTQFGIHHHNGVSDFNLGSDLMEPFRPVIDYWVAHQKFNELTPDVKFGLVELLNLELEYNGQITILRNALTKHVQNCLKFMTTPKEEFEVKVVMTHEVPNNALISHV
>AP018699.1|BBE26067.1|871000_875107_+|CRISPR-associated-protein-Csn1
MSRPYNIGLDIGTSSIGWSVVDDQSKLVSVRGKYGYGVRLYDEGQTAAERRSFRTTRRRLKRRKWRLGLLREIFEPYITPVDDTFFLRQKQSNLSPKDQRKLYPQTSLFNDRTDRAFYDDYPTIYHLRYKLMTEKRQFDIREIYLAMHHIVKYRGHFLNEAPVSSFKSSEINLVAHFDRLNTIFADLFSESGFQLETDKLAEVKALLLDNQQSASNRQRQALSLIYTPSTNKAVEKQNKAIATELLKAILGLKAKFNVLTGIEAEDVKAWTLTFNAENFDEEMVKLESSLDDNAHQIIESLQELYSGVLLAGIVPENQSLSQAMITKYDDHQKHLKMLKAVREALAPEDRQRLKQAYDQYVDGQENTKAYSKEDFYGDITKALKNNPDHPIVSEIKKLIELDQFMPKQRTKDNGAIPHQLHQQELDRIIENQQQYYPWLAELNPNSKRQTVAKYKLDELVAFRVPYYVGPLITAEQQQQSSDAKFAWMIRKAEGQITPWNFDDKVDRQASANEFIKRMTTTDTYLLAEDVLPKQSLIYQRFEVLNELNGLKIDDQPITTELKQAIFTDLFMQKTSVTVKNIQDYLVSEKRYASRPAITGLSDENKFNSRLSTYHDLKTIVGDAVDDVDKQADLEKCIEWSTIFEDGKIYSAKLNEIDWLTDQQRVQLAAKRYRGWGRLSAKLLTQIVNANGQRIMDLLWDTTDNFMRIVHSEDFDKLITEANQMMLAENDVQDVINDLYTSPQNKKALRQILLVVNDIQKAMKGQAPERILIEFAREDEVNPRLSVQRKRQVEQVYQNISNELLNNTEIRNELKDLSNSALSNTRLFLYFMQGGRDMYTGDSLNIDRLSTYDIDHILPQSFIKDNSLDNRVLVSQRMNRSKADQVPTDFTSVELGQKMQIQWEQMLRAGLITKKKYDNLTLNPDHISKYTMKGFINRQLVETRQVIKLATNLLMEQYGEDNIELITVKSGLTHQMRTEFDFPKNRNLNNHHHAFDAYLTAFVGLYLLKRYPKLKPYFVYGEYQKASQQDKWRNFNFLNGLKKDELVDENTEAVIWDKESGLAYLNKIYQFKKILVTREVHENSGALFNQTLYAAKDDKASGQGGKQLIPAKQNRPTALYGGYSGKTVAYMCIVRIKNKKGDLYKVCGVETSWLAQLKQLTDEDSQKAFLKQKISPQFTKVKKQKGTIVKVVEDFEVIAPHILINQRFFDNGQELTLGSATYKHNEQELILDKTAVKLLNGALPLTQSEELAEQVYDEILDQVMHYFPLYDTNQFRAKLSAGKAAFMKLPWKSQWDGNKMVQVGQQVILDRVLIGLHANAAVSDLGILKLTTPFGKLQKSSGIYLSPDTQIIYQSPTGLFERRVALRDL
>AP018699.1|BBE26066.1|870050_870872_+|methionine-ABC-transporter-substrate-binding-protein
MKKRSLGLLAAVFLLAGALAACGNKEAKSDSNTIVVGASAIPHAAILKHIQPELKKEGINLKVKVFSDYVLPNKALASGELDANYYQHKPFLKKANKDNGYDLVSVGSIHLEPLGLYSKQVKKLSDVKSGAKVLVSSSQPDWGRVLTILKDGGLITLKSGVNAENATFKDIASNPKHLKFEYTFEPKLMPELLKNDEGTLVAINSNYAVQAGLNPEKDAVALEKQSSPFANIVVTNKKDRNNPAIEKLVKALKSKSTQEWIKNKWHGAVLPVE
>AP018699.1|BBE26065.1|869341_870031_+|methionine-ABC-transporter-permease-protein
MDNVNGFQSYFQFKQVNWPSMWQATFETVWLTIVSVLLVAVLGFALGLVLYQTNASGGRVNRLLNGIVALLVNVFRSIPFIILIVLLIPLTKGLMGTMIGPKAAIPALIISAAPFYARLVELAFREVDGGVLEATRSMGASKVQIVWQVLLPESMPALVSGLTVTAISLVGYTAMAGVIGAGGLGNLAYQDGFQANQNAITLVATVIILIIVFICQKTGDLVVQHIDHR
>AP018699.1|BBE26064.1|868314_869349_+|methionine-ABC-transporter-ATP-binding-protein
MLTLKQVGKTFEREQKTFAALTDVSLNIEAGEIYGIIGYSGAGKSTLIRLLNGLEKPTTGDVLVEGQSIVGLSEQAMRPIRQKIGMIFQHFNLLWSKTVLENIMLPLKLAGVPKAERQIKARALLKIVELTHLEAAYPSELSGGQKQRVAIARALISDPKILLCDEATSALDPKTTNSILTLLAKINREMGITIVLVTHEMDAVRRICQRIAVMENGRLIEEGTVHEIFEKPQMAATKAFVAESLVVSPSETAASIDQLLERVPNGTIVQLRFNEEQSSQPVIGRLMRQYPAVEISVISGSLQQTINGALGYLYIQIQANPSDLKAVLAELAQQTIEVEVVRHG
>AP018699.1|BBE26063.1|867614_867923_+|glycine-cleavage-system-H-protein
MTMNNNDYFWTEEIAASIRRIGITKAAQNEFGLIKFVDVPIVGQKLTANETLVAIEAEKMVQDLDSPLAGELVNVNTPLADNPELLNADNEKDAWIADIRVD
>AP018699.1|BBE26073.1|882216_882999_+|Fe-S-cluster-assembly-ATPase-SufC
MSKLEIIDLHVGIDGKEILKGVNLEMNTGEIHAIMGPNGTGKSTLSETIMGNPKYEVLQGQIKLDGQNILQMPVDERARAGLFLAMQYPAEIQGITNAEFMRAAINARRAEDDQISVMAFLKKLDQRMAFLDMTEEMSERYLNEGFSGGEKKRNEILQLMMIEPKFAILDEIDSGLDIDALQVVSKGVNEMRGADFGSLIITHYQRLLNYIVPDYVHIMMGGKIVTTGDASLAKRLEDEGYVGIRDELGLDIKLTDDESK
>AP018699.1|BBE26074.1|883011_884313_+|Fe-S-cluster-assembly-protein-SufD
MKKTLAITPEQIASFSQLHQEPAWFAEMRQAAFAQIEQLELPIFEKINYKHWPVMAANAPTAVKSDLSLMPSAAANLSADQPYAVQIGQTTAKLNLPAELAEQGVIFTDIFTALQEHPDLVQQYYMQVTVKPNEDRLTAFHTALMNSGLFLYVPKNVVIKQPITAYYVQDSTQPADFIHHVLVVAEQNSEFSYLENLQTAGDHKNLANVVVEVIAKDNSHVHFSAVDAFGKSVTTYLNRRGHLMRDARIDWALGSMNDGNIIGDFDSDLVGAGSHAETKVVAISTGKQIQGIDTRVTNIGPRSIGHILQHGVILEDATLTFNGIGHILKGAKGADAQQENRVLMLSRTARGDANPLLLIDENDVQAGHAASVGRVDEQQMYYLMSRGLSKEVAQRLVIRGFLGAVLSEIPDKNVRQQLTDTIERKLIDGQPVK
>AP018699.1|BBE26075.1|884293_885532_+|cysteine-desulfurase
MVNQLNDYRCDFPILDQIVNDEPLVYLDNAATTQKPQAVIDRLVAYYQNDNANVHRGVHTLAERATAQYEAARTKVQTFIHAAASAEVIFTKGTTQSLNWVAGSFGPTVVEAGDEIMISVMEHHSNLVPWQQLAQKTGAKLRYIDLLPDGQLDLESARQVIGPKTKIVSLAHASNVLGVVNPIKTIAALVHAQGGYMVVDGAQAVPHMMVDVQALDADFYAFSGHKMLGPTGIGVLYGKQALLEQMPPVEYGGEMIDFVGLQSSTFKELPWRLEGGTPNIAGAIGLGAAIDYLTQIGMDHIQAHEQALVTMALPQLQAIDGLTIYGPQDAAQRTGVIAFNLDNLHPHDLATALDMEGVAVRAGHHCAQPLMQWLNVAATARASFYLYNTEADVKTFVTAIQAAKEFFQNGTL
>AP018699.1|BBE26076.1|885518_886010_+|nitrogen-fixation-protein-NifU
MALSKLDNLYRQVILDHSQHPHHHGHLTTADHEIELRNPTCGDVLQLELVLEDGQISQIAFSGEGCTISQASASMMTDAVMHKTPAQAEAMIERFSDMMIGDRDEDWSLLEDAAILQGVQQFPARIKCANLAWKALHKALNSDDRRATTGQMMNHAETEETNE
>AP018699.1|BBE26077.1|886006_887410_+|Fe-S-cluster-assembly-protein-SufB
MTEETTMPQFEEYDYGFSDDVEPVFSTGRGLTEDVVRAISREKKEPQWMLDFRLKSFHAYEKMPMPDFGPDLSDLDLEHMLYYQKATDKQYRDWEDVPDKIKETFDRLGVPEAERKYLAGSSAQYESEVVYHNMREEFEKLGIIFTDMDTGLREYPEIVKEYFSTLVKPTDNKFSALNSAVWSGGTFIYVPKGVRTDIPIQSYFRINAENSGQFERTLIIVDEGASVNYVEGCTAPSYSSDSLHAAVVEVFVKRDGYCRYTTIQNWSKNVYSLETKRAQAMENATMEWVDGNLGSKMTMKYPSVYLDGEGARGTMLSIAVAGEGVDQDSGARMIHAAPNTSSSIVSKSIAKDGGAVDYRGTVRFERDSDGSFAHVECDTIIMDDRSSSDTIPYNTILNGNVSMEHEAKVSKISEEQLYYLMSRGISEAKATEMIIMGFVEPFTKELPMEYAVELNRLISYEMEGSVG
>AP018699.1|BBE26078.1|887728_888658_+|transposase
MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRKRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
>AP018699.1|BBE26079.1|888832_889297_+|3-hydroxyacyl-ACP-dehydratase
MTRLNTTEIMALIPNRYPIIYIDTVESLVPGQEVVAVKNVTINEQFMRGYRPDAPQMPNTLMIEALAQTASILILKSPEFFGKTAYLGAAKNVVFNRVILPGDQIKFTVTLTKKKENMGVVQTHATVNDQVVCEAELTFVVAPRDDLLKSQQAT
>AP018699.1|BBE26080.1|889297_890278_+|3-oxoacyl-ACP-synthase-3
MAYRIIATASAVPDKIVTNDDLAEILETSNDWIESRTGIIERHMAVDENTSDLCYRVAEKLLAQANVAPEQIKAIIVATMTPDYYTPATAAIVQGKLGATHAFAFDISAACSGFTYALSVARGYIQFSTDYVLVIGGEVTSKVLDWSDRSSAVLFGDGAAGVLLQGTSAEPDGWYGEQLLTIGSQSEQLTSGYTPVTQANFGQVGQTHIQSSFFQMSGQAIYQFSTRQVPQAIETAVLAAGLSLDQVDHFLVHQANARLITRMASKLNQQLSKFPMNLQHYGNTSAASIPLLLAEQVATGQIKRGDLCVLCGFGGGLTIGIQIIQY
>AP018699.1|BBE26081.1|890301_890541_+|acyl-carrier-protein
MTKAEILKKVQAVIAEQLDVEESQVVPTANIREDLDADSLDIFEVMNQLEDDLEVKLDPDESIVTVQNVVDYIDQTMAK
>AP018699.1|BBE26082.1|890545_891481_+|ACP-S-malonyltransferase
MTKIGLLMSGQGSEKVGMGNDLYQTYPQYRAVIDQASAYAKLNLPAIMNDATLLGQTRYAQPALVAMSVGINALLADADIAVAGAIGLSLGEYAALITSGQLSLAEGMPLVVQRGALMQAAIGDQAHAMAAILKPDIAQVEAACATLQAQGQQVSIANYNSPQQIVVGGTEAGVAALLTALPEMRALRLPVKGAFHTPLFEQAALNFQTALAAVDFQVGDYPVISNTTEKPFAPDSIRTTLVAQMAQPTHFATGLRQLADSGVTTLIEVGPGNALSKFARQTVPDLARFNVSNADQFETVVTSLKGESIND

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NZ_CP012654	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence	336-365	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NZ_CP012654	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence	2397-2426	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NC_011136	Lactobacillus plantarum plasmid pLR1, complete sequence	1093-1122	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NZ_CP021504	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence	1557-1586	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NZ_CP021504	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence	3531-3560	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NZ_CP015127	Lactobacillus plantarum strain CAUH2 plasmid pCAUH201, complete sequence	564-593	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NZ_CP012654	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence	336-365	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NZ_CP012654	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence	2397-2426	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NC_011136	Lactobacillus plantarum plasmid pLR1, complete sequence	1093-1122	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NZ_CP021504	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence	1557-1586	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NZ_CP021504	Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence	3531-3560	0	1.0
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NZ_CP015127	Lactobacillus plantarum strain CAUH2 plasmid pCAUH201, complete sequence	564-593	0	1.0
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	KX859226	Lactobacillus plantarum plasmid p3-11C, complete sequence	848-877	1	0.967
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	KX859226	Lactobacillus plantarum plasmid p3-11C, complete sequence	848-877	1	0.967
AP018699_1	1.6\|877587\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877587-877616	30	MF417893	Uncultured Caudovirales phage clone 9AX_2, partial genome	30945-30974	4	0.867
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	AP019561	Staphylococcus phage SP197 DNA, complete genome	7688-7717	4	0.867
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_041878	Pectobacterium phage CBB, complete genome	25494-25523	5	0.833
AP018699_1	1.6\|877587\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877587-877616	30	NC_028886	Bacillus phage phi4B1, complete genome	30746-30775	5	0.833
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP032704	Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence	93533-93561	5	0.828
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074137	Bacteroides phage DAC16, complete genome	26108-26136	5	0.828
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074146	Bacteroides phage SJC03, complete genome	22902-22930	5	0.828
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	MF417885	Uncultured Caudovirales phage clone 3S_9, partial genome	40870-40899	5	0.833
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	MK893987	Staphylococcus phage PMBT8, complete genome	67174-67203	5	0.833
AP018699_2	2.40\|881542\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881542-881571	30	NZ_CP022518	Pantoea vagans strain FBS135 plasmid pPant2, complete sequence	81098-81127	5	0.833
AP018699_2	2.44\|881806\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881806-881835	30	MN694424	Marine virus AFVG_250M468, complete genome	50938-50967	5	0.833
AP018699_1	1.2\|877323\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877323-877352	30	MT774410	CrAssphage cr272_1, complete genome	40455-40484	6	0.8
AP018699_1	1.2\|877323\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877323-877352	30	MT774411	CrAssphage cr273_1, complete genome	92417-92446	6	0.8
AP018699_1	1.5\|877521\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877521-877550	30	NZ_CP018094	Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence	358-387	6	0.8
AP018699_1	1.5\|877521\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877521-877550	30	NZ_CP018094	Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence	13779-13808	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP048112	Klebsiella michiganensis strain BD177 plasmid unnamed6	10461-10490	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP045219	Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence	16070-16099	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP018922	Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence	4543-4572	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP019191	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence	28420-28449	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP045693	Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence	4095-4124	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	CP052480	Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence	3949-3978	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NC_005814	Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence	14404-14433	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP026206	Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence	36857-36886	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP022119	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence	12275-12304	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP022119	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence	18083-18112	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP026384	Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence	31838-31867	6	0.8
AP018699_2	2.3\|879100\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879100-879129	30	NZ_CP035200	Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence	23198-23227	6	0.8
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	483139-483167	6	0.793
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MN694208	Marine virus AFVG_250M460, complete genome	454-482	6	0.793
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	MK415406	Phage FAKO27_000238F, complete genome	59046-59075	6	0.8
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	NC_024391	Staphylococcus phage DW2, complete genome	13114-13143	6	0.8
AP018699_2	2.19\|880155\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880155-880184	30	MH937465	Streptococcus phage CHPC873, complete genome	25614-25643	6	0.8
AP018699_2	2.28\|880749\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880749-880778	30	MK798142	Pantoea phage vB_PagM_AAM22, complete genome	12875-12904	6	0.8
AP018699_2	2.29\|880815\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880815-880844	30	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	15872-15901	6	0.8
AP018699_2	2.31\|880947\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880947-880976	30	MK798142	Pantoea phage vB_PagM_AAM22, complete genome	12875-12904	6	0.8
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	MN694366	Marine virus AFVG_250M1050, complete genome	34539-34568	6	0.8
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	AP014927	Ralstonia phage RSF1 DNA, complete genome	37194-37223	6	0.8
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	146765-146794	6	0.8
AP018699_2	2.36\|881277\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881277-881306	30	NC_014367	Pediococcus pentosaceus plasmid pPS1, complete sequence	793-822	6	0.8
AP018699_2	2.37\|881343\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881343-881372	30	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	15872-15901	6	0.8
AP018699_2	2.41\|881608\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881608-881637	30	NC_014367	Pediococcus pentosaceus plasmid pPS1, complete sequence	793-822	6	0.8
AP018699_2	2.46\|881938\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881938-881967	30	AP014182	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S41-C49, * SEQUENCING IN PROGRESS *	16431-16460	6	0.8
AP018699_2	2.46\|881938\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881938-881967	30	MN693457	Marine virus AFVG_25M365, complete genome	5180-5209	6	0.8
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_005815	Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence	3821-3850	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	88755-88784	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009714	Yersinia pestis Pestoides F plasmid pMT, complete sequence	133099-133128	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009784	Yersinia pestis strain El Dorado plasmid pMT, complete sequence	13268-13297	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009722	Yersinia pestis strain Shasta plasmid pMT, complete sequence	75150-75179	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045259	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence	58258-58287	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_014022	Yersinia pestis Z176003 plasmid pMT1, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_017266	Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence	3821-3850	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033694	Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence	74475-74504	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_009378	Yersinia pestis Pestoides F plasmid MT, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	124143-124172	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	85902-85931	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_006323	Yersinia pestis plasmid pG8786, complete sequence	1880-1909	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045146	Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence	58253-58282	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045164	Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence	58259-58288	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045155	Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence	58254-58283	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045159	Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence	58969-58998	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006746	Yersinia pestis 8787 plasmid pMT1, complete sequence	49930-49959	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_003134	Yersinia pestis CO92 plasmid pMT1, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP045150	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence	58258-58287	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_017155	Yersinia pestis D106004 plasmid pMT1, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_017158	Yersinia pestis D182038 plasmid pMT1, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_004835	Yersinia pestis strain KIM5 plasmid pMT1, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006760	Yersinia pestis 1413 plasmid pMT, complete sequence	49930-49959	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006752	Yersinia pestis 3067 plasmid pMT1, complete sequence	68025-68054	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_008118	Yersinia pestis Nepal516 plasmid pMT, complete sequence	3825-3854	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP019709	Yersinia pestis strain 195/P plasmid pMT1, complete sequence	12834-12863	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009904	Yersinia pestis Antiqua plasmid pMT, complete sequence	45031-45060	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009841	Yersinia pestis A1122 plasmid pMT, complete sequence	41392-41421	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009989	Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence	19196-19225	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP010021	Yersinia pestis str. Pestoides B plasmid pMT, complete sequence	99125-99154	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_010158	Yersinia pestis Angola plasmid pMT-pPCP, complete sequence	74901-74930	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009702	Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence	51773-51802	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006790	Yersinia pestis 2944 plasmid pMT, complete sequence	44253-44282	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006749	Yersinia pestis 3770 plasmid pMT1, complete sequence	43543-43572	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006756	Yersinia pestis 1522 plasmid pMT, complete sequence	87056-87085	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_004838	Yersinia pestis KIM10+ plasmid pMT-1, complete sequence	44483-44512	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033692	Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence	45690-45719	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033693	Yersinia pestis strain FDAARGOS_603 plasmid unnamed4	751-780	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP033693	Yersinia pestis strain FDAARGOS_603 plasmid unnamed4	102396-102425	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP006779	Yersinia pestis 1412 plasmid pMT, complete sequence	2540-2569	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP016275	Yersinia pestis strain Cadman plasmid pMT1, complete sequence	78242-78271	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NC_010633	Nostoc punctiforme PCC 73102 plasmid pNPUN04, complete sequence	54549-54578	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP009934	Yersinia pestis Angola plasmid pMT, complete sequence	14844-14873	7	0.767
AP018699_1	1.5\|877521\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877521-877550	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	615383-615412	7	0.767
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP015111	Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence	145521-145549	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NC_018687	Bacillus thuringiensis MC28 plasmid pMC189, complete sequence	144807-144835	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP051644	Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence	35664-35692	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP051644	Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence	90148-90176	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT080590	UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome	90266-90294	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	KY779848	Staphylococcus phage qdsa001, complete genome	18784-18812	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	KX532239	Staphylococcus phage StAP1, complete genome	41-69	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	LC492751	Staphylococcus phage KSAP7 genomic DNA, compelete genome	122375-122403	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	LC492752	Staphylococcus phage KSAP11 genomic DNA, compelete genome	122732-122760	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT080587	UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome	18228-18256	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	AP019522	Staphylococcal phage MR003 DNA, complete genome	23943-23971	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NC_022090	Staphylococcus phage vB_SauM_Remus, complete genome	118974-119002	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	KP881332	Staphylococcus phage Stau2, complete genome	126177-126205	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT080588	UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome	130124-130152	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT080595	UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome	110351-110379	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NC_020877	Staphylococcus phage vB_SauM_Romulus, complete genome	115663-115691	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NC_010901	Lactococcus lactis plasmid pNP40, complete sequence	38621-38649	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_LR215005	Mycoplasma conjunctivae strain NCTC10147 plasmid 9	103634-103662	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	NZ_CP017367	Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-4, complete sequence	776-804	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074142	Bacteroides phage DAC23, complete genome	26206-26234	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074141	Bacteroides phage DAC22, complete genome	28515-28543	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT080584	UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome	45607-45635	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074139	Bacteroides phage DAC19, complete genome	28427-28455	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	140607-140635	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MH552500	CrAssphage sp. isolate ctcc615, complete genome	1425-1453	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MN693200	Marine virus AFVG_25M319, complete genome	20903-20931	7	0.759
AP018699_2	2.11\|879628\|29\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879628-879656	29	MT074140	Bacteroides phage DAC20, complete genome	28427-28455	7	0.759
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	MK448796	Streptococcus phage Javan53, complete genome	27140-27169	7	0.767
AP018699_2	2.13\|879759\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879759-879788	30	MN855637	Bacteriophage sp. isolate 32, complete genome	35263-35292	7	0.767
AP018699_2	2.26\|880617\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880617-880646	30	MN693012	Marine virus AFVG_117M3, complete genome	39485-39514	7	0.767
AP018699_2	2.27\|880683\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880683-880712	30	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	254997-255026	7	0.767
AP018699_2	2.27\|880683\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880683-880712	30	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	55872-55901	7	0.767
AP018699_2	2.29\|880815\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880815-880844	30	NZ_CP031031	Runella sp. SP2 plasmid pSP2_1, complete sequence	91707-91736	7	0.767
AP018699_2	2.30\|880881\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880881-880910	30	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	254997-255026	7	0.767
AP018699_2	2.30\|880881\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880881-880910	30	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	55872-55901	7	0.767
AP018699_2	2.33\|881079\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881079-881108	30	MN270892	Pectobacterium phage Wc4-1, complete genome	55936-55965	7	0.767
AP018699_2	2.33\|881079\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881079-881108	30	MN270891	Pectobacterium phage Wc4, complete genome	55936-55965	7	0.767
AP018699_2	2.33\|881079\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881079-881108	30	MK290738	Pectobacterium phage Arno18, complete genome	53199-53228	7	0.767
AP018699_2	2.33\|881079\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881079-881108	30	MK290737	Pectobacterium phage Arno162, complete genome	53964-53993	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MG065689	UNVERIFIED: Campylobacter phage A110a, complete genome	34939-34968	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MT932211	Escherichia phage VEcB, complete genome	86856-86885	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MN850601	Escherichia phage inny, complete genome	76563-76592	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	KU522583	Enterobacteria phage ECGD1, complete genome	96968-96997	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MN850645	Escherichia phage outra, complete genome	52888-52917	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MF805809	Escherichia phage vB_EcoM_PHB05, complete genome	87959-87988	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	FR775895	Enterobacteria phage phi92, complete genome	87806-87835	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MG065645	UNVERIFIED: Campylobacter phage A145, complete genome	141895-141924	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MN850632	Escherichia phage alia, complete genome	28234-28263	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MN850573	Escherichia phage muut, complete genome	124442-124471	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MG065639	UNVERIFIED: Campylobacter phage A150, complete genome	101663-101692	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MG065656	UNVERIFIED: Campylobacter phage C3, complete genome	56955-56984	7	0.767
AP018699_2	2.34\|881145\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881145-881174	30	MH816848	Escherichia phage vB_vPM_PD06, complete genome	62032-62061	7	0.767
AP018699_2	2.37\|881343\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881343-881372	30	NZ_CP031031	Runella sp. SP2 plasmid pSP2_1, complete sequence	91707-91736	7	0.767
AP018699_2	2.45\|881872\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881872-881901	30	MN694030	Marine virus AFVG_250M187, complete genome	10621-10650	7	0.767
AP018699_2	2.46\|881938\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881938-881967	30	MN694219	Marine virus AFVG_250M758, complete genome	13522-13551	7	0.767
AP018699_1	1.1\|877257\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877257-877286	30	NZ_CP050730	Salmonella enterica subsp. enterica serovar Typhimurium strain ST106 plasmid pST106-2, complete sequence	1043-1072	8	0.733
AP018699_1	1.5\|877521\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	877521-877550	30	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	438069-438098	8	0.733
AP018699_1	1.7\|877653\|30\|AP018699\|CRISPRCasFinder,CRT	877653-877682	30	AP014715	Edwardsiella phage PEi26 DNA, complete sequence	173745-173774	8	0.733
AP018699_1	1.7\|877653\|30\|AP018699\|CRISPRCasFinder,CRT	877653-877682	30	NC_028683	Edwardsiella phage PEi20 DNA, complete sequence	174173-174202	8	0.733
AP018699_2	2.4\|879166\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879166-879195	30	NZ_CP033195	Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence	43166-43195	8	0.733
AP018699_2	2.4\|879166\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879166-879195	30	NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	147447-147476	8	0.733
AP018699_2	2.4\|879166\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879166-879195	30	NZ_CP026110	Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence	48272-48301	8	0.733
AP018699_2	2.4\|879166\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879166-879195	30	NZ_CP033202	Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence	51336-51365	8	0.733
AP018699_2	2.5\|879232\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879232-879261	30	MN693472	Marine virus AFVG_25M86, complete genome	8321-8350	8	0.733
AP018699_2	2.10\|879562\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879562-879591	30	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	10215-10244	8	0.733
AP018699_2	2.19\|880155\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880155-880184	30	NZ_CP037748	Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence	21266-21295	8	0.733
AP018699_2	2.19\|880155\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880155-880184	30	NZ_CP020480	Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence	18821-18850	8	0.733
AP018699_2	2.21\|880287\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880287-880316	30	NZ_KY978631	Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence	26677-26706	8	0.733
AP018699_2	2.27\|880683\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880683-880712	30	NZ_CP036489	Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence	936-965	8	0.733
AP018699_2	2.30\|880881\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880881-880910	30	NZ_CP036489	Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence	936-965	8	0.733
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	NZ_CP051645	Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence	19709-19738	8	0.733
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	NC_013381	Staphylococcus epidermidis plasmid SAP107A, complete sequence	15776-15805	8	0.733
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	NZ_CP031272	Staphylococcus caprae strain 26D plasmid unnamed1, complete sequence	2995-3024	8	0.733
AP018699_2	2.32\|881013\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881013-881042	30	NZ_MN602039	Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence	14172-14201	8	0.733
AP018699_2	2.2\|879034\|30\|AP018699\|PILER-CR,CRISPRCasFinder,CRT	879034-879063	30	KC699836	Bacillus phage SIOphi, partial genome	72067-72096	9	0.7
AP018699_2	2.12\|879693\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	879693-879722	30	NC_048697	Pseudomonas phage Littlefix, complete genome	21107-21136	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	915343-915372	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	734307-734336	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	184610-184639	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	490579-490608	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	314305-314334	9	0.7
AP018699_2	2.20\|880221\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880221-880250	30	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	791685-791714	9	0.7
AP018699_2	2.27\|880683\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880683-880712	30	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	37683-37712	9	0.7
AP018699_2	2.29\|880815\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880815-880844	30	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	228671-228700	9	0.7
AP018699_2	2.30\|880881\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880881-880910	30	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	37683-37712	9	0.7
AP018699_2	2.37\|881343\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	881343-881372	30	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	228671-228700	9	0.7
AP018699_2	2.47\|882004\|30\|AP018699\|CRISPRCasFinder,CRT	882004-882033	30	NZ_CP024892	Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence	197590-197619	9	0.7
AP018699_2	2.21\|880287\|30\|AP018699\|CRISPRCasFinder,CRT,PILER-CR	880287-880316	30	NC_049445	Acinetobacter phage AbTZA1, complete genome	16121-16150	10	0.667

1. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012654 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

2. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012654 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

3. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_011136 (Lactobacillus plantarum plasmid pLR1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

4. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021504 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

5. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021504 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

6. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015127 (Lactobacillus plantarum strain CAUH2 plasmid pCAUH201, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

7. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012654 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

8. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012654 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK10, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

9. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_011136 (Lactobacillus plantarum plasmid pLR1, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

10. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021504 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

11. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021504 (Lactobacillus plantarum strain SRCM102022 plasmid pPL2022-3 sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

12. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015127 (Lactobacillus plantarum strain CAUH2 plasmid pCAUH201, complete sequence) position: , mismatch: 0, identity: 1.0

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gtaaaatctagttattttaccggggatagc	Protospacer
******************************

13. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KX859226 (Lactobacillus plantarum plasmid p3-11C, complete sequence) position: , mismatch: 1, identity: 0.967

gtaaaatctagttattttaccggggatagc-	CRISPR spacer
gtaaaatctagttattttacc-gggatagcg	Protospacer
********************* ********

14. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KX859226 (Lactobacillus plantarum plasmid p3-11C, complete sequence) position: , mismatch: 1, identity: 0.967

gtaaaatctagttattttaccggggatagc-	CRISPR spacer
gtaaaatctagttattttacc-gggatagcg	Protospacer
********************* ********

15. spacer 1.6|877587|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to MF417893 (Uncultured Caudovirales phage clone 9AX_2, partial genome) position: , mismatch: 4, identity: 0.867

aatccaacactactaagtactaacagtact-	CRISPR spacer
aatccgacactactaaatactaata-tacta	Protospacer
*****.**********.******.* ****

16. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to AP019561 (Staphylococcus phage SP197 DNA, complete genome) position: , mismatch: 4, identity: 0.867

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
ggattctaaacgggtcgaattcgacgggtt	Protospacer
* .******** ****** ***********

17. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 5, identity: 0.833

ttacatacatatcataaaca--tcttcatagc	CRISPR spacer
ttacatacatatcatcaacatgtcttatta--	Protospacer
*************** ****  ****  **

18. spacer 1.6|877587|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_028886 (Bacillus phage phi4B1, complete genome) position: , mismatch: 5, identity: 0.833

aatccaacactactaagtactaacagtact-	CRISPR spacer
aatccgacactactaaatactaa-agaacaa	Protospacer
*****.**********.****** ** **

19. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.828

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaataattaaattaaaaaacaaag	Protospacer
*********** *.*********.* * *

20. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 5, identity: 0.828

taaaaaaataagtgaattaaa-aagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaagtcat-	Protospacer
** ****************** ***..*.

21. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 5, identity: 0.828

taaaaaaataagtgaattaaa-aagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaagtcat-	Protospacer
** ****************** ***..*.

22. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MF417885 (Uncultured Caudovirales phage clone 3S_9, partial genome) position: , mismatch: 5, identity: 0.833

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
taattctaaacaggtcgaattcgacgggtt	Protospacer
  .******** ****** ***********

23. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 5, identity: 0.833

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
aaattctaaactggtcgaattcgactggtt	Protospacer
. .*************** ****** ****

24. spacer 2.40|881542|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022518 (Pantoea vagans strain FBS135 plasmid pPant2, complete sequence) position: , mismatch: 5, identity: 0.833

-catcaagaataatttgttcaatgttcacat	CRISPR spacer
tcattga-aataattttttcaatgttaacat	Protospacer
 ***..* ******** ********* ****

25. spacer 2.44|881806|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN694424 (Marine virus AFVG_250M468, complete genome) position: , mismatch: 5, identity: 0.833

agttcaccttcaggtagcttctttgttcaa	CRISPR spacer
agttctccttcaggtagcttcgtttctgaa	Protospacer
***** *************** ** .* **

26. spacer 1.2|877323|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 6, identity: 0.8

aaaaattatttaaatatcgtttgcttggtc	CRISPR spacer
aaaaattatttaaatatggttacatttgta	Protospacer
***************** ***   ** **

27. spacer 1.2|877323|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 6, identity: 0.8

aaaaattatttaaatatcgtttgcttggtc	CRISPR spacer
aaaaattatttaaatatggttacatttgta	Protospacer
***************** ***   ** **

28. spacer 1.5|877521|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018094 (Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence) position: , mismatch: 6, identity: 0.8

aaacaaaagagtattattaagagtgtagta	CRISPR spacer
aaatctaagaatattattaagagagtagtt	Protospacer
***.  ****.************ *****

29. spacer 1.5|877521|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018094 (Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence) position: , mismatch: 6, identity: 0.8

aaacaaaagagtattattaagagtgtagta	CRISPR spacer
aaatctaagaatattattaagagagtagtt	Protospacer
***.  ****.************ *****

30. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048112 (Klebsiella michiganensis strain BD177 plasmid unnamed6) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

31. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045219 (Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

32. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018922 (Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

33. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019191 (Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

34. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045693 (Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

35. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to CP052480 (Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

36. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_005814 (Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

37. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026206 (Escherichia coli strain ECONIH5 plasmid pECO-cbb3, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

38. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

39. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

40. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026384 (Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attacgaaatatacgaaagctgttttatcg	Protospacer
 **.* ****** ************* ** .

41. spacer 2.3|879100|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035200 (Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence) position: , mismatch: 6, identity: 0.8

tatca-gaaataaacgaaagctgtttaatga	CRISPR spacer
-attatgaaatatacgaaagctgttttatag	Protospacer
 **.* ****** ************* **..

42. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 6, identity: 0.793

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaacaagtcaattaaaaagacttg	Protospacer
********.**** ********** . .*

43. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN694208 (Marine virus AFVG_250M460, complete genome) position: , mismatch: 6, identity: 0.793

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaatgagtaaattaaaaatttcag	Protospacer
*********.***.********* .*  *

44. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK415406 (Phage FAKO27_000238F, complete genome) position: , mismatch: 6, identity: 0.8

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
atgatttaaactggtcgatttcgactaggt	Protospacer
.** *.******************* .* *

45. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_024391 (Staphylococcus phage DW2, complete genome) position: , mismatch: 6, identity: 0.8

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
ggagtgtaaaccggtcgaattcgacgggtt	Protospacer
* . * *****.****** ***********

46. spacer 2.19|880155|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MH937465 (Streptococcus phage CHPC873, complete genome) position: , mismatch: 6, identity: 0.8

taaataagttccaatcttct----taataccact	CRISPR spacer
taaataagttccaagcttctttcataattc----	Protospacer
************** *****    **** *

47. spacer 2.28|880749|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK798142 (Pantoea phage vB_PagM_AAM22, complete genome) position: , mismatch: 6, identity: 0.8

tacgttgtgttccttatcctaagcagctta	CRISPR spacer
cacgtggtgttccttatcttaagcagcacc	Protospacer
.**** ************.******** .

48. spacer 2.29|880815|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 6, identity: 0.8

taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
taagaaagaaatggcaaaacactgttgata	Protospacer
********.************. *  ** *

49. spacer 2.31|880947|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK798142 (Pantoea phage vB_PagM_AAM22, complete genome) position: , mismatch: 6, identity: 0.8

tacgttgtgttccttatcctaagcagctta	CRISPR spacer
cacgtggtgttccttatcttaagcagcacc	Protospacer
.**** ************.******** .

50. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN694366 (Marine virus AFVG_250M1050, complete genome) position: , mismatch: 6, identity: 0.8

aaatcaaaatcgacaccaaaaacttaagtc	CRISPR spacer
aaatcaaaatctacaccaaaaacaaaaaat	Protospacer
*********** ***********  **. .

51. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 6, identity: 0.8

aaatcaaaatcgacaccaaaaacttaagtc----	CRISPR spacer
aaatcaaaatcgataccaaacac----gtcgtgg	Protospacer
*************.****** **    ***

52. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 6, identity: 0.8

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
agaacaatcggcaatcatcaccttcaatat	Protospacer
*. **************.******.* * *

53. spacer 2.36|881277|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_014367 (Pediococcus pentosaceus plasmid pPS1, complete sequence) position: , mismatch: 6, identity: 0.8

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gttaaatctagttattttactggtaatggg	Protospacer
** *****************.** .**.*

54. spacer 2.37|881343|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 6, identity: 0.8

taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
taagaaagaaatggcaaaacactgttgata	Protospacer
********.************. *  ** *

55. spacer 2.41|881608|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_014367 (Pediococcus pentosaceus plasmid pPS1, complete sequence) position: , mismatch: 6, identity: 0.8

gtaaaatctagttattttaccggggatagc	CRISPR spacer
gttaaatctagttattttactggtaatggg	Protospacer
** *****************.** .**.*

56. spacer 2.46|881938|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to AP014182 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S41-C49, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

cagaagagtttgacaaagctaacccgtcaa--	CRISPR spacer
cagaagagtttgacaatgcta--ttgtcgata	Protospacer
**************** ****  ..***.*

57. spacer 2.46|881938|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN693457 (Marine virus AFVG_25M365, complete genome) position: , mismatch: 6, identity: 0.8

cagaagagtttgacaaagctaacccgtcaa--	CRISPR spacer
aagaagagtttgataaagctaa--agtcattg	Protospacer
 ************.********   ****

58. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_005815 (Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

59. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009490 (Yersinia pestis strain PBM19 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

60. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009714 (Yersinia pestis Pestoides F plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

61. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009784 (Yersinia pestis strain El Dorado plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

62. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009722 (Yersinia pestis strain Shasta plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

63. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045259 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

64. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_014022 (Yersinia pestis Z176003 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

65. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_017266 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

66. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033694 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

67. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_009378 (Yersinia pestis Pestoides F plasmid MT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

68. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

69. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

70. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_006323 (Yersinia pestis plasmid pG8786, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

71. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045146 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

72. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045164 (Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

73. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045155 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

74. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045159 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

75. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006746 (Yersinia pestis 8787 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

76. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_003134 (Yersinia pestis CO92 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

77. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045150 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

78. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_017155 (Yersinia pestis D106004 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

79. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_017158 (Yersinia pestis D182038 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

80. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_004835 (Yersinia pestis strain KIM5 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

81. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006760 (Yersinia pestis 1413 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

82. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006752 (Yersinia pestis 3067 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

83. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_008118 (Yersinia pestis Nepal516 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

84. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019709 (Yersinia pestis strain 195/P plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

85. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009904 (Yersinia pestis Antiqua plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

86. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009841 (Yersinia pestis A1122 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

87. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009989 (Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

88. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010021 (Yersinia pestis str. Pestoides B plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

89. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_010158 (Yersinia pestis Angola plasmid pMT-pPCP, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

90. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009702 (Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

91. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006790 (Yersinia pestis 2944 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

92. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006749 (Yersinia pestis 3770 plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

93. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006756 (Yersinia pestis 1522 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

94. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_004838 (Yersinia pestis KIM10+ plasmid pMT-1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

95. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033692 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

96. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033693 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed4) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

97. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033693 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed4) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

98. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006779 (Yersinia pestis 1412 plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

99. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016275 (Yersinia pestis strain Cadman plasmid pMT1, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

100. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NC_010633 (Nostoc punctiforme PCC 73102 plasmid pNPUN04, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ctttaaacacatcagaaacatcttcatagg	Protospacer
.* .* ***.**** **************

101. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009934 (Yersinia pestis Angola plasmid pMT, complete sequence) position: , mismatch: 7, identity: 0.767

ttacatacatatcataaacatcttcatagc	CRISPR spacer
ttacataaatatcgtaaacatctcctgatg	Protospacer
******* *****.*********.*  *

102. spacer 1.5|877521|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

aaacaaaagagtattattaagagtgtagta	CRISPR spacer
taataaaaaagtattattaagagttgattt	Protospacer
 **.****.***************  * *

103. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015111 (Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaattagtgaattaaatagtaaaa	Protospacer
 ******** *********** **. * .

104. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_018687 (Bacillus thuringiensis MC28 plasmid pMC189, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
gtaaaaaataagtgagttaaaaatagaca	Protospacer
  *************.*******   **.

105. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051644 (Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaataagtgaattcaacaaaaata	Protospacer
****************** ** *.  *..

106. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051644 (Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaataagtgaattcaacaaaaata	Protospacer
****************** ** *.  *..

107. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

108. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

109. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

110. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to LC492751 (Staphylococcus phage KSAP7 genomic DNA, compelete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

111. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to LC492752 (Staphylococcus phage KSAP11 genomic DNA, compelete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

112. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

113. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

114. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

115. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KP881332 (Staphylococcus phage Stau2, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

116. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

117. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

118. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

119. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_010901 (Lactococcus lactis plasmid pNP40, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaagaataagtgatttaaaaaacagta	Protospacer
*****.********* *******.* ...

120. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaactaaatgaattaaaaaacatta	Protospacer
******* ***.***********.*  ..

121. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017367 (Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-4, complete sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaacaattgaattaaaaacggttg	Protospacer
********.** ***********    .*

122. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaaatctt	Protospacer
** ****************** *. * .

123. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaaatctt	Protospacer
** ****************** *. * .

124. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaaaaaaataagagacttaaaaagacaaa	Protospacer
 *********** ** ******** .* .

125. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaaatctt	Protospacer
** ****************** *. * .

126. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
taaaaaaatcagagaattaaaaaaatcaa	Protospacer
********* ** **********. *  .

127. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MH552500 (CrAssphage sp. isolate ctcc615, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
aaataaaataaatgaattaaaaagaaata	Protospacer
 ** *******.************  *..

128. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN693200 (Marine virus AFVG_25M319, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
gcaaaaaataactgaattaaaaaatgaca	Protospacer
  ********* ***********.. **.

129. spacer 2.11|879628|29|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.759

taaaaaaataagtgaattaaaaagctacg	CRISPR spacer
tacaaaaataagtgaattaaacaaatctt	Protospacer
** ****************** *. * .

130. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 7, identity: 0.767

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
aaaatttaaactggtcgaattcgactggtt	Protospacer
. . *.************ ****** ****

131. spacer 2.13|879759|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN855637 (Bacteriophage sp. isolate 32, complete genome) position: , mismatch: 7, identity: 0.767

gtgttctaaactggtcgatttcgacgggtt	CRISPR spacer
atatgtaaaacaggtcgatttcgaccggtt	Protospacer
.*.* . **** ************* ****

132. spacer 2.26|880617|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN693012 (Marine virus AFVG_117M3, complete genome) position: , mismatch: 7, identity: 0.767

ccagcgtaataagtttttccatcagcgcct	CRISPR spacer
ttggctaaataagttgttgcatcagcgcct	Protospacer
...**  ******** ** ***********

133. spacer 2.27|880683|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
atggatctatttgggataacaattattatc	Protospacer
* ..*************** ** *****

134. spacer 2.27|880683|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
aaaaacctacttgggataaaaaagtttgct	Protospacer
*****.***.*************  **.

135. spacer 2.29|880815|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031031 (Runella sp. SP2 plasmid pSP2_1, complete sequence) position: , mismatch: 7, identity: 0.767

-----taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
actatcaataaa-----ggcaaaacatggaagaaa	Protospacer
     .** ***     ******************

136. spacer 2.30|880881|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
atggatctatttgggataacaattattatc	Protospacer
* ..*************** ** *****

137. spacer 2.30|880881|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
aaaaacctacttgggataaaaaagtttgct	Protospacer
*****.***.*************  **.

138. spacer 2.33|881079|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN270892 (Pectobacterium phage Wc4-1, complete genome) position: , mismatch: 7, identity: 0.767

aacaccagttggctgtttaaccccagtacc	CRISPR spacer
tgatgcatttggctgtttaacctcagtacc	Protospacer
 .   ** **************.*******

139. spacer 2.33|881079|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN270891 (Pectobacterium phage Wc4, complete genome) position: , mismatch: 7, identity: 0.767

aacaccagttggctgtttaaccccagtacc	CRISPR spacer
tgatgcatttggctgtttaacctcagtacc	Protospacer
 .   ** **************.*******

140. spacer 2.33|881079|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK290738 (Pectobacterium phage Arno18, complete genome) position: , mismatch: 7, identity: 0.767

aacaccagttggctgtttaaccccagtacc	CRISPR spacer
tgatgcatttggctgtttaacctcagtacc	Protospacer
 .   ** **************.*******

141. spacer 2.33|881079|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MK290737 (Pectobacterium phage Arno162, complete genome) position: , mismatch: 7, identity: 0.767

aacaccagttggctgtttaaccccagtacc	CRISPR spacer
tgatgcatttggctgtttaacctcagtacc	Protospacer
 .   ** **************.*******

142. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MG065689 (UNVERIFIED: Campylobacter phage A110a, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

143. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MT932211 (Escherichia phage VEcB, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

144. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN850601 (Escherichia phage inny, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

145. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to KU522583 (Enterobacteria phage ECGD1, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

146. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN850645 (Escherichia phage outra, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

147. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MF805809 (Escherichia phage vB_EcoM_PHB05, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

148. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to FR775895 (Enterobacteria phage phi92, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

149. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MG065645 (UNVERIFIED: Campylobacter phage A145, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

150. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN850632 (Escherichia phage alia, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

151. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN850573 (Escherichia phage muut, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

152. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MG065639 (UNVERIFIED: Campylobacter phage A150, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

153. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MG065656 (UNVERIFIED: Campylobacter phage C3, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

154. spacer 2.34|881145|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MH816848 (Escherichia phage vB_vPM_PD06, complete genome) position: , mismatch: 7, identity: 0.767

aatacaatcggcaatcaccacctttacttt	CRISPR spacer
gatagaatcggcaatcaccacctaacatct	Protospacer
.*** ******************    *.*

155. spacer 2.37|881343|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031031 (Runella sp. SP2 plasmid pSP2_1, complete sequence) position: , mismatch: 7, identity: 0.767

-----taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
actatcaataaa-----ggcaaaacatggaagaaa	Protospacer
     .** ***     ******************

156. spacer 2.45|881872|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN694030 (Marine virus AFVG_250M187, complete genome) position: , mismatch: 7, identity: 0.767

cgacgacttaccattctagggggtggcagc	CRISPR spacer
tgatgactttccattctagggggtagtatg	Protospacer
.**.***** **************.*.*

157. spacer 2.46|881938|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to MN694219 (Marine virus AFVG_250M758, complete genome) position: , mismatch: 7, identity: 0.767

cagaagagtttgacaaagctaacccgtcaa	CRISPR spacer
agaaagaggttgataaagctaacccgttta	Protospacer
 ..***** ****.*************. *

158. spacer 1.1|877257|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050730 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST106 plasmid pST106-2, complete sequence) position: , mismatch: 8, identity: 0.733

ttacatacatatcataaacatcttcatagc	CRISPR spacer
atctatatatatcataagcatcttcattat	Protospacer
 * .***.*********.********* ..

159. spacer 1.5|877521|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 8, identity: 0.733

aaacaaaagagtattattaagagtgtagta	CRISPR spacer
aaacaaaagagttttataaagagatgtaca	Protospacer
************ **** *****    ..*

160. spacer 1.7|877653|30|AP018699|CRISPRCasFinder,CRT matches to AP014715 (Edwardsiella phage PEi26 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ggtcgctaatttgtctgacgtatactttgt	CRISPR spacer
caatggcaatctgtatgacgtatactttgt	Protospacer
 . .* .***.*** ***************

161. spacer 1.7|877653|30|AP018699|CRISPRCasFinder,CRT matches to NC_028683 (Edwardsiella phage PEi20 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ggtcgctaatttgtctgacgtatactttgt	CRISPR spacer
taatggcaatctgtatgacgtatactttgt	Protospacer
 . .* .***.*** ***************

162. spacer 2.4|879166|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033195 (Xanthomonas oryzae pv. oryzae strain CIAT plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gaagtctcggcgtacgactctgtgtggctt	CRISPR spacer
atcgtctcggcgcacgactcggtgtgcatg	Protospacer
.  *********.******* *****  *

163. spacer 2.4|879166|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022994 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence) position: , mismatch: 8, identity: 0.733

gaagtctcggcgtacgactctgtgtggctt	CRISPR spacer
atcgtctcggcgcacgactcggtgtgcatg	Protospacer
.  *********.******* *****  *

164. spacer 2.4|879166|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026110 (Paraburkholderia hospita strain DSM 17164 plasmid pEMT1, complete sequence) position: , mismatch: 8, identity: 0.733

gaagtctcggcgtacgactctgtgtggctt	CRISPR spacer
atcgtctcggcgcacgactcggtgtgcatg	Protospacer
.  *********.******* *****  *

165. spacer 2.4|879166|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033202 (Xanthomonas oryzae pv. oryzae strain BXO1 plasmid pBXO1-1, complete sequence) position: , mismatch: 8, identity: 0.733

gaagtctcggcgtacgactctgtgtggctt	CRISPR spacer
atcgtctcggcgcacgactcggtgtgcatg	Protospacer
.  *********.******* *****  *

166. spacer 2.5|879232|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to MN693472 (Marine virus AFVG_25M86, complete genome) position: , mismatch: 8, identity: 0.733

tcacagttactatggagggcaatcgtgtca	CRISPR spacer
ctacagttactatgtagggcaattttattc	Protospacer
..************ ********. *.*.

167. spacer 2.10|879562|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 8, identity: 0.733

gtttcttccggaagtaaagtagaagtactg	CRISPR spacer
ttctcttcaggaagtaaattagaagtggaa	Protospacer
 *.***** ********* *******.  .

168. spacer 2.19|880155|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037748 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

taaataagttccaatcttcttaataccact	CRISPR spacer
atcataatttccaatcttcttaatatgtgt	Protospacer
   **** *****************.   *

169. spacer 2.19|880155|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020480 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence) position: , mismatch: 8, identity: 0.733

taaataagttccaatcttcttaataccact	CRISPR spacer
atcataatttccaatcttcttaatatgtgt	Protospacer
   **** *****************.   *

170. spacer 2.21|880287|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY978631 (Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence) position: , mismatch: 8, identity: 0.733

atttatggtcgtagttatatgtttctatat	CRISPR spacer
aacccttcccgaagttatatgtttctatat	Protospacer
* .. *  .** ******************

171. spacer 2.27|880683|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036489 (Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
cttaggatattttggataaaacatattagg	Protospacer
   *.  ***** ******** ********

172. spacer 2.30|880881|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036489 (Rahnella aquatilis strain MEM40 plasmid pMEM40-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
cttaggatattttggataaaacatattagg	Protospacer
   *.  ***** ******** ********

173. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051645 (Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcaaaatcgacaccaaaaacttaagtc	CRISPR spacer
gaatcaaaatggacaccaaaaatcaaaaaa	Protospacer
.********* ***********.. **.

174. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_013381 (Staphylococcus epidermidis plasmid SAP107A, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcaaaatcgacaccaaaaacttaagtc	CRISPR spacer
gaatcaaaatggacaccaaaaatcaaaaaa	Protospacer
.********* ***********.. **.

175. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031272 (Staphylococcus caprae strain 26D plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcaaaatcgacaccaaaaacttaagtc	CRISPR spacer
gaatcaaaatggacaccaaaaatcaaaaaa	Protospacer
.********* ***********.. **.

176. spacer 2.32|881013|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcaaaatcgacaccaaaaacttaagtc	CRISPR spacer
gaatcaaaatggacaccaaaaatcaaaaaa	Protospacer
.********* ***********.. **.

177. spacer 2.2|879034|30|AP018699|PILER-CR,CRISPRCasFinder,CRT matches to KC699836 (Bacillus phage SIOphi, partial genome) position: , mismatch: 9, identity: 0.7

caaaaacagtcttcttagtccgataccgat	CRISPR spacer
tcaatacagtcttcttagaccgatatgcta	Protospacer
. ** ************* ******.

178. spacer 2.12|879693|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_048697 (Pseudomonas phage Littlefix, complete genome) position: , mismatch: 9, identity: 0.7

ctattaccggtaacttcgttgcacgtggtg	CRISPR spacer
atgcggacggtaacttcgttgaacgtgggc	Protospacer
 *.. . ************** ******

179. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgccagccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

180. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgccagccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

181. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgccagccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

182. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgtcggccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

183. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgccagccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

184. spacer 2.20|880221|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.7

taataactgccgtcccgtcgttgtcgtcga	CRISPR spacer
cggcgccggccgtcccgtccttgtcgtcgt	Protospacer
..... * *********** *********

185. spacer 2.27|880683|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
tagctgatattcgggataaaaaatattact	Protospacer
 *.    ****.****************

186. spacer 2.29|880815|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
taagataggaatggcaaaacagcatgatta	Protospacer
***** ***************  . ..  *

187. spacer 2.30|880881|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaatctatttgggataaaaaatattagg	CRISPR spacer
tagctgatattcgggataaaaaatattact	Protospacer
 *.    ****.****************

188. spacer 2.37|881343|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

taagaaaggaatggcaaaacatggaagaaa	CRISPR spacer
taagataggaatggcaaaacagcatgatta	Protospacer
***** ***************  . ..  *

189. spacer 2.47|882004|30|AP018699|CRISPRCasFinder,CRT matches to NZ_CP024892 (Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence) position: , mismatch: 9, identity: 0.7

cctatgggacggcttgtccgatggttgaac	CRISPR spacer
tctctgggacggcttgtccgatctcggtgt	Protospacer
.** ******************  . * ..

190. spacer 2.21|880287|30|AP018699|CRISPRCasFinder,CRT,PILER-CR matches to NC_049445 (Acinetobacter phage AbTZA1, complete genome) position: , mismatch: 10, identity: 0.667

atttatggtcgtagttatatgtttctatat	CRISPR spacer
tgacatggtcgtaattatatgtttccgcta	Protospacer
   .*********.***********...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

13146 : 22054

Leptospira_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE25186.1\|13146_14553_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	2.8e-131	53.9
BBE25187.1\|14652_15582_-\|transposase	transposase	H7BW47	unidentified_phage	3.9e-25	34.4
BBE25188.1\|15906_16566_+	hypothetical protein	NA	NA	NA	NA
BBE25189.1\|16565_17027_+	hypothetical protein	NA	NA	NA	NA
BBE25190.1\|17076_18423_-	xanthine permease	Q9KX94	Enterobacteria_phage	1.6e-38	28.9
BBE25191.1\|18790_19531_+	16S rRNA methyltransferase GidB	NA	NA	NA	NA
BBE25192.1\|19530_20409_+	chromosome partitioning protein ParB	S5VTK0	Leptospira_phage	1.8e-19	40.6
BBE25193.1\|20421_21189_+	chromosome partitioning protein ParA	Q8JL10	Natrialba_phage	1.3e-29	33.0
BBE25194.1\|21178_22054_+	chromosome partitioning protein ParB	S5VSZ7	Leptospira_phage	2.9e-17	41.2

DBSCAN-SWA_2

725325 : 733559

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE25915.1\|725325_725652_-	hypothetical protein	M4STD1	Rhodobacter_phage	2.4e-06	35.6
BBE25916.1\|725667_726033_-	membrane protein	NA	NA	NA	NA
BBE25917.1\|726142_727138_-	UDP-glucose 4-epimerase	A0A1V0SG19	Hokovirus	2.2e-45	35.3
BBE25918.1\|727290_729585_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.3e-74	31.4
BBE25919.1\|729619_730138_+	adenine phosphoribosyltransferase	A0A2K9L2N8	Tupanvirus	2.8e-12	31.1
BBE25920.1\|730356_730971_-	LexA repressor	A0A1B1P7Q3	Bacillus_phage	1.3e-16	57.4
BBE25921.1\|731106_731349_+	hypothetical protein	NA	NA	NA	NA
BBE25922.1\|731429_731657_+	hypothetical protein	NA	NA	NA	NA
BBE25923.1\|731813_733559_+	multidrug ABC transporter ATP-binding and permease protein	W8CYL7	Bacillus_phage	1.0e-45	27.7

DBSCAN-SWA_3

824460 : 832497

Acanthocystis_turfacea_Chlorella_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26013.1\|824460_825180_+	glycerol uptake facilitator protein	M1HCP3	Acanthocystis_turfacea_Chlorella_virus	1.3e-28	34.5
BBE26014.1\|825564_826938_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.3e-43	29.3
BBE26015.1\|826981_827461_-	nucleoside 2-deoxyribosyltransferase	A0A1G5S9Z4	Enterococcus_phage	3.2e-15	35.6
BBE26016.1\|827605_827773_-	hypothetical protein	NA	NA	NA	NA
BBE26017.1\|827911_829957_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	1.7e-68	35.4
BBE26018.1\|830182_830791_+	peptidoglycan-binding protein LysM	A0A249XZV3	Enterococcus_phage	9.2e-23	49.7
BBE26019.1\|830929_831199_+	hypothetical protein	NA	NA	NA	NA
BBE26020.1\|831191_831671_+	hypothetical protein	A0A1B0RXA7	Streptococcus_phage	4.4e-20	40.8
BBE26021.1\|831654_832497_+	hypothetical protein	Q6DMX4	Streptococcus_phage	1.7e-51	39.9

DBSCAN-SWA_4

962526 : 1017165

Bacillus_phage(23.53%)

integrase,transposase,tRNA

attL 997407:997421|attR 1019025:1019039

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26156.1\|962526_963384_-\|transposase	transposase	H7BW47	unidentified_phage	2.1e-25	34.4
BBE26157.1\|963610_964408_-\|transposase	transposase	Q6J1X2	Lactobacillus_phage	4.7e-27	34.9
BBE26158.1\|964428_964680_-\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	3.8e-07	40.0
BBE26159.1\|965109_967848_+	transcriptional regulator	NA	NA	NA	NA
BBE26160.1\|967942_968356_+	mannose/fructose-specific PTS system IIA component	NA	NA	NA	NA
BBE26161.1\|968356_968827_+	mannose/fructose/sorbose-specific PTS system IID component	NA	NA	NA	NA
BBE26162.1\|968858_969641_+	mannose-specific PTS system IIC component	NA	NA	NA	NA
BBE26163.1\|969656_970487_+	mannose-specific PTS system IID component	NA	NA	NA	NA
BBE26164.1\|970527_971505_+	fructoselysine 6-phosphate deglycase	NA	NA	NA	NA
BBE26165.1\|971560_972190_+	beta-phosphoglucomutase	M1H491	Acanthocystis_turfacea_Chlorella_virus	3.7e-11	28.6
BBE26166.1\|972205_973468_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
BBE26167.1\|973522_974341_-	acetyl esterase	NA	NA	NA	NA
BBE26168.1\|974495_975359_+	shikimate 5-dehydrogenase	NA	NA	NA	NA
BBE26169.1\|975365_976367_+	phospho-2-dehydro-3-deoxyheptonate aldolase	NA	NA	NA	NA
BBE26170.1\|976369_977467_+	3-dehydroquinate synthase	A9YVT7	Ostreococcus_tauri_virus	3.6e-25	27.3
BBE26171.1\|977564_978092_+	shikimate kinase	NA	NA	NA	NA
BBE26172.1\|978181_978781_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.9e-60	55.6
BBE26173.1\|978969_979890_-\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	1.6e-50	38.2
BBE26174.1\|980274_980991_+	hypothetical protein	NA	NA	NA	NA
BBE26175.1\|981045_981819_+	hypothetical protein	NA	NA	NA	NA
BBE26176.1\|981861_982125_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	6.8e-07	37.5
BBE26177.1\|982418_982931_+	hypothetical protein	A0A1P8CWQ3	Bacillus_phage	1.1e-21	36.1
BBE26178.1\|982939_983401_+	hypothetical protein	NA	NA	NA	NA
BBE26179.1\|983446_983746_+	hypothetical protein	NA	NA	NA	NA
BBE26180.1\|983790_985227_-	dipeptidase	NA	NA	NA	NA
BBE26181.1\|985360_985549_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
BBE26182.1\|985839_986646_-	haloacid dehalogenase	NA	NA	NA	NA
BBE26183.1\|986798_987134_+	hypothetical protein	NA	NA	NA	NA
BBE26184.1\|987212_987995_+	SAM-dependent methyltransferase	NA	NA	NA	NA
BBE26185.1\|988018_988987_+	hypothetical protein	NA	NA	NA	NA
BBE26186.1\|989034_989346_-	hypothetical protein	NA	NA	NA	NA
BBE26187.1\|989350_989566_-	XRE family transcriptional regulator	NA	NA	NA	NA
BBE26188.1\|989672_989885_-	hypothetical protein	NA	NA	NA	NA
BBE26189.1\|989866_990040_-	hypothetical protein	NA	NA	NA	NA
BBE26190.1\|990187_990628_+	hypothetical protein	NA	NA	NA	NA
BBE26191.1\|990721_991204_+	hypothetical protein	NA	NA	NA	NA
BBE26192.1\|991255_992305_-	isopentenyl-diphosphate delta-isomerase	NA	NA	NA	NA
BBE26193.1\|992315_993404_-	phosphomevalonate kinase	NA	NA	NA	NA
BBE26194.1\|993422_994397_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
BBE26195.1\|994419_995415_-	mevalonate kinase	NA	NA	NA	NA
BBE26196.1\|995560_999100_+	ATP-dependent helicase/nuclease subunit B	NA	NA	NA	NA
997407:997421	attL	NA	NA	NA	NA
BBE26197.1\|999092_1002809_+	ATP-dependent helicase/nuclease subunit A	A7KV33	Bacillus_phage	1.3e-02	48.3
BBE26198.1\|1002873_1005711_+	ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	2.9e-71	28.1
BBE26199.1\|1005789_1006266_+	hypothetical secreted protein	NA	NA	NA	NA
BBE26200.1\|1006374_1007673_+\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EMB4	Moumouvirus	8.7e-55	29.7
BBE26201.1\|1008183_1008807_+	DNA replication protein DnaD	A0A0N7AE27	Bacillus_phage	3.7e-11	35.9
BBE26202.1\|1008827_1009478_+	endonuclease III	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	6.4e-14	26.8
BBE26203.1\|1009537_1011841_-	penicillin-binding protein 1A	NA	NA	NA	NA
BBE26204.1\|1011847_1012480_-	recombination protein RecU	A0A1C8E9C3	Bacillus_phage	1.5e-20	32.6
BBE26205.1\|1012553_1013114_+	hypothetical protein	NA	NA	NA	NA
BBE26206.1\|1013175_1013568_+	cell division protein GpsB	NA	NA	NA	NA
BBE26207.1\|1014047_1015190_+	RNA methyltransferase	NA	NA	NA	NA
BBE26208.1\|1015293_1016247_+	D-3-phosphoglycerate dehydrogenase	M1I539	Acanthocystis_turfacea_Chlorella_virus	6.3e-10	23.0
BBE26209.1\|1016580_1017165_+\|integrase	integrase	A0A0A0YRV7	Streptococcus_phage	6.1e-32	44.2
1019025:1019039	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1091648 : 1099287

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26285.1\|1091648_1092491_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	2.9e-19	41.9
BBE26286.1\|1092690_1093185_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	3.2e-26	38.6
BBE26287.1\|1093200_1094151_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.4e-126	66.2
BBE26288.1\|1094531_1096415_-	ATPase component of ABC transporter with duplicated ATPase domains	A0A2K9L3Z8	Tupanvirus	8.5e-51	30.4
BBE26289.1\|1096557_1097019_-	hypothetical protein	NA	NA	NA	NA
BBE26290.1\|1097082_1098282_-\|tRNA	tRNA CCA-pyrophosphorylase	A0A1B0V011	Roseobacter_phage	4.3e-32	40.6
BBE26291.1\|1098429_1099287_+	YitT family membrane protein	M1Q1P6	Streptococcus_phage	6.6e-59	41.5

DBSCAN-SWA_6

1386635 : 1411623

Pithovirus(16.67%)

transposase,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26586.1\|1386635_1386923_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
BBE26587.1\|1387045_1387393_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
BBE26588.1\|1387498_1387789_-	hypothetical protein	NA	NA	NA	NA
BBE26589.1\|1387942_1388572_+	glutathione S-transferase	NA	NA	NA	NA
BBE26590.1\|1388619_1389027_-	OsmC/Ohr family protein	NA	NA	NA	NA
BBE26591.1\|1389189_1390821_-	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
BBE26592.1\|1391296_1391518_-	hypothetical protein	NA	NA	NA	NA
BBE26593.1\|1391689_1392295_-	two-component system response regulator	NA	NA	NA	NA
BBE26594.1\|1392291_1393416_-	two-component system sensor histidine kinase	NA	NA	NA	NA
BBE26595.1\|1393412_1394159_-	ABC-2 transporter family protein	NA	NA	NA	NA
BBE26596.1\|1394162_1395035_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	2.0e-18	30.4
BBE26597.1\|1395177_1395819_+	3-methyladenine DNA glycosylase	NA	NA	NA	NA
BBE26598.1\|1395905_1396589_+	hypothetical protein	M1PHA2	Moumouvirus	8.8e-14	29.6
BBE26599.1\|1396585_1397059_+\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	1.1e-07	27.3
BBE26600.1\|1397145_1397958_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	6.7e-45	39.6
BBE26601.1\|1397999_1398167_-	hypothetical protein	NA	NA	NA	NA
BBE26602.1\|1398240_1399095_+	transcriptional regulator	NA	NA	NA	NA
BBE26603.1\|1399091_1400009_-	NADPH:quinone reductase	NA	NA	NA	NA
BBE26604.1\|1400235_1400427_-	hypothetical protein	NA	NA	NA	NA
BBE26605.1\|1400401_1400758_-	hypothetical protein	NA	NA	NA	NA
BBE26606.1\|1400870_1401512_-	NAD-dependent dehydratase	NA	NA	NA	NA
BBE26607.1\|1401718_1401856_-	hypothetical protein	NA	NA	NA	NA
BBE26608.1\|1401967_1404028_-	hypothetical protein	NA	NA	NA	NA
BBE26609.1\|1404014_1404476_-	hypothetical protein	NA	NA	NA	NA
BBE26610.1\|1404715_1405669_-	inosine-uridine preferring nucleoside hydrolase	NA	NA	NA	NA
BBE26611.1\|1405806_1406778_-	periplasmic binding protein / LacI transcriptional regulator	NA	NA	NA	NA
BBE26612.1\|1406791_1407082_-	hypothetical protein	NA	NA	NA	NA
BBE26613.1\|1407093_1408707_-	hypothetical protein	NA	NA	NA	NA
BBE26614.1\|1408732_1409326_-\|transposase	transposase	H7BVY4	unidentified_phage	7.1e-20	35.5
BBE26615.1\|1409318_1410302_-	hypothetical protein	NA	NA	NA	NA
BBE26616.1\|1410358_1410550_-	hypothetical protein	NA	NA	NA	NA
BBE26617.1\|1411038_1411623_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	5.3e-52	53.9

DBSCAN-SWA_7

1463281 : 1544321

Lactobacillus_phage(26.67%)

head,integrase,tail,protease,transposase,terminase,portal

attL 1475180:1475239|attR 1547049:1550328

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26665.1\|1463281_1463683_-\|transposase	transposase	NA	NA	NA	NA
BBE26666.1\|1463695_1464205_-	RNA methyltransferase	NA	NA	NA	NA
BBE26667.1\|1464458_1465292_-	23S rRNA methyltransferase	NA	NA	NA	NA
BBE26668.1\|1465503_1466460_+	magnesium and cobalt transporter	NA	NA	NA	NA
BBE26669.1\|1466655_1467633_+	GMP reductase	G3MBI2	Bacillus_virus	1.2e-141	75.8
BBE26670.1\|1467803_1468235_+	GNAT family acetyltransferase	NA	NA	NA	NA
BBE26671.1\|1468281_1469427_-	membrane protein	NA	NA	NA	NA
BBE26672.1\|1469444_1469834_-	glucitol/sorbitol-specific PTS system IIA component	NA	NA	NA	NA
BBE26673.1\|1469982_1471008_+	6-phosphogluconolactonase	NA	NA	NA	NA
BBE26674.1\|1471042_1472512_-	major facilitator superfamily transporter	NA	NA	NA	NA
BBE26675.1\|1472609_1473809_-	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	5.6e-149	69.1
BBE26676.1\|1473990_1474701_+	hypothetical protein	NA	NA	NA	NA
1475180:1475239	attL	NA	NA	NA	NA
BBE26677.1\|1480453_1480891_-	Fur family transcriptional regulator	NA	NA	NA	NA
BBE26678.1\|1481028_1483086_-	alkaline phosphatase	W6LM83	Streptococcus_phage	5.3e-155	47.9
BBE26679.1\|1483303_1483537_-	hypothetical protein	NA	NA	NA	NA
BBE26680.1\|1483608_1484487_-	3-hydroxyisobutyrate dehydrogenase	A0A077SLF7	Escherichia_phage	6.0e-23	29.0
BBE26681.1\|1484499_1485516_-	membrane protein	NA	NA	NA	NA
BBE26682.1\|1485596_1486799_-	glycosyltransferase	NA	NA	NA	NA
BBE26683.1\|1487217_1487646_+	hypothetical protein	NA	NA	NA	NA
BBE26684.1\|1488151_1488520_-	membrane protein	NA	NA	NA	NA
BBE26685.1\|1488519_1489365_-	permease	NA	NA	NA	NA
BBE26686.1\|1489389_1490898_-	hemerythrin HHE cation binding domain protein	NA	NA	NA	NA
BBE26687.1\|1490890_1491124_-	hypothetical protein	NA	NA	NA	NA
BBE26688.1\|1491144_1491888_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
BBE26689.1\|1491887_1492112_-	hypothetical protein	G3MBC9	Bacillus_virus	3.7e-06	34.4
BBE26690.1\|1492263_1492632_-	hypothetical protein	NA	NA	NA	NA
BBE26691.1\|1492852_1493764_-	mannose-specific PTS system IID component	NA	NA	NA	NA
BBE26692.1\|1493781_1494588_-	mannose-specific PTS system IIC component	NA	NA	NA	NA
BBE26693.1\|1494617_1495598_-	mannose/fructose/sorbose-specific PTS system IIAB component	NA	NA	NA	NA
BBE26694.1\|1495933_1497211_-	proton glutamate symport protein	NA	NA	NA	NA
BBE26695.1\|1497248_1497935_-	HAD family hydrolase	NA	NA	NA	NA
BBE26696.1\|1497953_1498895_-	dihydroorotate dehydrogenase	A0A1V0SH91	Hokovirus	4.0e-65	45.8
BBE26697.1\|1499378_1500194_-	cell surface protein	NA	NA	NA	NA
BBE26698.1\|1500281_1501544_-	hypothetical protein	NA	NA	NA	NA
BBE26699.1\|1501637_1501853_-	hypothetical protein	NA	NA	NA	NA
BBE26700.1\|1502054_1502423_-	endoribonuclease L-PSP	NA	NA	NA	NA
BBE26701.1\|1502593_1503556_-	malate permease	NA	NA	NA	NA
BBE26702.1\|1503588_1505220_-	malolactic enzyme	NA	NA	NA	NA
BBE26703.1\|1505350_1506250_+	malolactic regulator	NA	NA	NA	NA
BBE26704.1\|1506317_1507247_-\|transposase	transposase	H7BW47	unidentified_phage	2.3e-25	34.4
BBE26705.1\|1507446_1508367_+\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	3.0e-49	37.9
BBE26706.1\|1508570_1509110_-	hypothetical protein	NA	NA	NA	NA
BBE26707.1\|1509226_1510354_-	endolysin	A0A0P0HRN9	Lactobacillus_phage	2.7e-36	32.6
BBE26708.1\|1510340_1510724_-	hypothetical protein	NA	NA	NA	NA
BBE26709.1\|1510854_1510989_-	hypothetical protein	NA	NA	NA	NA
BBE26710.1\|1510981_1511278_-	hypothetical protein	NA	NA	NA	NA
BBE26711.1\|1511277_1512027_-	hypothetical protein	NA	NA	NA	NA
BBE26712.1\|1512042_1513455_-	hypothetical protein	A0A2K9VBY4	Lactobacillus_phage	1.3e-43	33.9
BBE26713.1\|1513458_1514919_-	prophage protein	A0A0M7RDS2	Lactobacillus_phage	5.4e-61	37.7
BBE26714.1\|1514942_1515770_-	phage protein	E9LUJ3	Lactobacillus_phage	8.9e-29	33.4
BBE26715.1\|1515780_1520001_-\|tail	phage tail tape measure protein	Q9AZS0	Lactococcus_phage	6.1e-81	33.1
BBE26716.1\|1520212_1520608_-	hypothetical protein	NA	NA	NA	NA
BBE26717.1\|1520881_1521511_-\|tail	tail protein	A0A060AKE9	Staphylococcus_phage	2.0e-17	31.8
BBE26718.1\|1521521_1521890_-	hypothetical protein	NA	NA	NA	NA
BBE26719.1\|1521886_1522309_-	phage protein	NA	NA	NA	NA
BBE26720.1\|1522311_1522689_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
BBE26721.1\|1522675_1522990_-	phage DNA packaging	NA	NA	NA	NA
BBE26722.1\|1523254_1524400_-\|head,protease	phage prohead protease	A0A0C5AEH1	Paenibacillus_phage	2.2e-86	47.7
BBE26723.1\|1524402_1525143_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A0B5A796	Paenibacillus_phage	5.7e-67	57.0
BBE26724.1\|1525087_1526341_-\|portal	phage portal protein	A0A0K2CZB0	Paenibacillus_phage	1.5e-107	50.5
BBE26725.1\|1526359_1528132_-\|terminase	phage terminase large subunit	F8J1B1	Lactobacillus_phage	1.6e-205	59.6
BBE26726.1\|1528121_1528577_-\|terminase	phage-related terminase-small subunit	F8J1A9	Lactobacillus_phage	9.0e-15	33.1
BBE26727.1\|1528712_1529039_-	HNH endonuclease	A0A0K2CYS9	Paenibacillus_phage	1.6e-18	54.4
BBE26728.1\|1529031_1529271_-	hypothetical protein	NA	NA	NA	NA
BBE26729.1\|1529236_1529530_-	hypothetical protein	NA	NA	NA	NA
BBE26730.1\|1529483_1529693_-	hypothetical protein	NA	NA	NA	NA
BBE26731.1\|1529763_1530087_-	hypothetical protein	NA	NA	NA	NA
BBE26732.1\|1530124_1530955_-	hypothetical protein	NA	NA	NA	NA
BBE26733.1\|1530967_1531315_-	hypothetical protein	NA	NA	NA	NA
BBE26734.1\|1531500_1532028_-	hypothetical protein	NA	NA	NA	NA
BBE26735.1\|1532210_1532732_-	hypothetical protein	A0A1S7FZ07	Listeria_phage	2.7e-07	27.2
BBE26736.1\|1532745_1533177_-	hypothetical protein	A0A0S2MVI5	Bacillus_phage	5.3e-33	64.0
BBE26737.1\|1533173_1533446_-	hypothetical protein	NA	NA	NA	NA
BBE26738.1\|1533500_1533803_-	hypothetical protein	NA	NA	NA	NA
BBE26739.1\|1533870_1534122_-	hypothetical protein	NA	NA	NA	NA
BBE26740.1\|1534118_1534340_-	hypothetical protein	NA	NA	NA	NA
BBE26741.1\|1534336_1534558_-	hypothetical protein	NA	NA	NA	NA
BBE26742.1\|1534554_1535313_-	hypothetical protein	Q0SPI6	Clostridium_phage	6.1e-32	37.9
BBE26743.1\|1535545_1535803_-	hypothetical protein	NA	NA	NA	NA
BBE26744.1\|1535817_1536498_-	phage anti-repressor protein	U5U413	Lactobacillus_phage	8.4e-33	71.0
BBE26745.1\|1536512_1536659_-	hypothetical protein	NA	NA	NA	NA
BBE26746.1\|1536764_1537022_-	hypothetical protein	NA	NA	NA	NA
BBE26747.1\|1537076_1537547_+	hypothetical protein	NA	NA	NA	NA
BBE26748.1\|1537674_1537929_-	transcriptional regulator	A0A2I6PF09	Staphylococcus_phage	2.2e-15	61.8
BBE26749.1\|1538077_1538443_+	hypothetical protein	D7RWF2	Brochothrix_phage	2.8e-19	68.1
BBE26750.1\|1538452_1538797_+	transcriptional regulator	A0A141E0Q5	Streptococcus_phage	1.2e-14	42.1
BBE26751.1\|1538834_1539287_+	membrane protein	R4IBK9	Listeria_phage	1.1e-15	37.7
BBE26752.1\|1539394_1540090_+	hypothetical protein	NA	NA	NA	NA
BBE26753.1\|1540120_1540933_+	hypothetical protein	NA	NA	NA	NA
BBE26754.1\|1540949_1541507_+	hypothetical protein	NA	NA	NA	NA
BBE26755.1\|1541602_1541785_+	hypothetical protein	NA	NA	NA	NA
BBE26756.1\|1542012_1542549_+	hypothetical protein	Q4ZA70	Staphylococcus_virus	7.3e-32	42.2
BBE26757.1\|1542551_1543073_+	hypothetical protein	NA	NA	NA	NA
BBE26758.1\|1543214_1544321_+\|integrase	integrase	D6PSS4	Lactobacillus_phage	1.0e-59	34.1
1547049:1550328	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1581009 : 1588661

Enterococcus_phage(33.33%)

integrase

attL 1587565:1587580|attR 1588813:1588828

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26787.1\|1581009_1581960_-	ribonucleoside-diphosphate reductase beta subunit	A0A096XT60	Enterococcus_phage	3.2e-99	55.0
BBE26788.1\|1581974_1582901_-	ribonucleoside-diphosphate reductase	A0A2H4P8A9	Corynebacterium_phage	1.3e-36	31.4
BBE26789.1\|1583007_1585176_-	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.1e-255	60.2
BBE26790.1\|1585182_1585620_-	ribonucleotide reductase	NA	NA	NA	NA
BBE26791.1\|1585885_1586230_+	hypothetical protein	M1Q231	Streptococcus_phage	2.0e-14	43.4
BBE26792.1\|1586137_1586332_-	hypothetical protein	Q6J1X3	Lactobacillus_phage	2.6e-24	94.6
BBE26793.1\|1586361_1587363_-	hypothetical protein	NA	NA	NA	NA
1587565:1587580	attL	NA	NA	NA	NA
BBE26794.1\|1587740_1588661_+\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	3.5e-50	37.9
BBE26794.1\|1587740_1588661_+\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	3.5e-50	37.9
1588813:1588828	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1718943 : 1762502

Staphylococcus_phage(23.08%)

transposase,integrase,holin,protease

attL 1751246:1751305|attR 1762734:1762806

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE26910.1\|1718943_1720440_+\|holin	glycine betaine/carnitine/choline transport protein	A0A2I7QNT1	Vibrio_phage	1.1e-05	22.1
BBE26911.1\|1720514_1720982_+	hypothetical protein	NA	NA	NA	NA
BBE26912.1\|1721029_1721716_-	hypothetical protein	NA	NA	NA	NA
BBE26913.1\|1721821_1722016_-	hypothetical protein	NA	NA	NA	NA
BBE26914.1\|1722051_1722987_-	nucleoside hydrolase	NA	NA	NA	NA
BBE26915.1\|1723095_1723410_+	membrane protein	NA	NA	NA	NA
BBE26916.1\|1723613_1724177_-	translation elongation factor P	NA	NA	NA	NA
BBE26917.1\|1724264_1725056_-	hypothetical protein	NA	NA	NA	NA
BBE26918.1\|1725216_1726281_+	hypothetical protein	NA	NA	NA	NA
BBE26919.1\|1726284_1727031_-	methylase for ubiquinone/menaquinone biosynthesis	NA	NA	NA	NA
BBE26920.1\|1727269_1727704_-	universal stress protein UspA	NA	NA	NA	NA
BBE26921.1\|1727719_1729288_-	manganese transporter	NA	NA	NA	NA
BBE26922.1\|1729467_1730040_-	peptidase propeptide and YPEB domain protein	NA	NA	NA	NA
BBE26923.1\|1730114_1730726_-	amino acid transporter	NA	NA	NA	NA
BBE26924.1\|1730772_1731444_-	membrane protein	NA	NA	NA	NA
BBE26925.1\|1731704_1732280_-	hypothetical protein	W5R8L2	Staphylococcus_phage	2.0e-35	45.1
BBE26926.1\|1732272_1732626_-	hypothetical protein	NA	NA	NA	NA
BBE26927.1\|1732793_1734014_-	surface antigen	NA	NA	NA	NA
BBE26928.1\|1734306_1735293_+	hypothetical protein	NA	NA	NA	NA
BBE26929.1\|1735336_1735597_-	hypothetical protein	NA	NA	NA	NA
BBE26930.1\|1735569_1735755_-	hypothetical protein	NA	NA	NA	NA
BBE26931.1\|1735776_1736637_-	2,5-diketo-D-gluconic acid reductase	A0A2H4PQR8	Staphylococcus_phage	5.1e-59	44.5
BBE26932.1\|1736936_1737065_+	hypothetical protein	NA	NA	NA	NA
BBE26933.1\|1737105_1738800_+	myosin-cross-reactive antigen	NA	NA	NA	NA
BBE26934.1\|1738950_1739208_-	hypothetical protein	NA	NA	NA	NA
BBE26935.1\|1739210_1740140_-\|transposase	transposase	H7BW47	unidentified_phage	2.3e-25	34.4
BBE26936.1\|1740322_1740583_-	hypothetical protein	NA	NA	NA	NA
BBE26937.1\|1740557_1741253_-	sugar phosphate phosphatase	NA	NA	NA	NA
BBE26938.1\|1741415_1743947_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.9e-62	25.5
BBE26939.1\|1744075_1744609_+	transcriptional regulator	A0A0C5AJ29	Paenibacillus_phage	9.9e-05	23.9
BBE26940.1\|1744650_1744995_+	hypothetical protein	A0A1B1P773	Bacillus_phage	1.8e-12	39.6
BBE26941.1\|1745241_1745463_+	hypothetical protein	NA	NA	NA	NA
BBE26942.1\|1745672_1746419_-	short-chain dehydrogenase/oxidoreductase	A0A2P0VP75	Tetraselmis_virus	8.4e-10	27.8
BBE26943.1\|1746420_1746603_-	hypothetical protein	NA	NA	NA	NA
BBE26944.1\|1746737_1747970_+	acetylornithine deacetylase / succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
BBE26945.1\|1748061_1748379_-	thiol-disulfide isomerase / thioredoxin	A0A1J0GW78	Streptomyces_phage	2.6e-13	37.6
BBE26946.1\|1748478_1749141_-	ArsR family transcriptional regulator	NA	NA	NA	NA
BBE26947.1\|1750066_1750246_-	hypothetical protein	NA	NA	NA	NA
BBE26948.1\|1750225_1750849_+\|transposase	transposase	Q6J1X2	Lactobacillus_phage	1.3e-112	98.1
BBE26949.1\|1750908_1751073_+	hypothetical protein	NA	NA	NA	NA
1751246:1751305	attL	NA	NA	NA	NA
BBE26950.1\|1751484_1751916_-\|transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	1.3e-18	39.7
BBE26951.1\|1752106_1752259_-	hypothetical protein	NA	NA	NA	NA
BBE26952.1\|1752350_1752833_-	ArcR family transcriptional regulator	NA	NA	NA	NA
BBE26953.1\|1753079_1753640_+	hypothetical protein	NA	NA	NA	NA
BBE26954.1\|1753768_1754383_-	GDSL-like lipase/acylhydrolase family protein	NA	NA	NA	NA
BBE26955.1\|1754582_1755815_-	hypothetical protein	NA	NA	NA	NA
BBE26956.1\|1756046_1756337_-	hypothetical protein	NA	NA	NA	NA
BBE26957.1\|1756549_1756693_-	hypothetical protein	NA	NA	NA	NA
BBE26958.1\|1756936_1757404_+	DNA-binding ferritin-like protein	NA	NA	NA	NA
BBE26959.1\|1757364_1757535_-	hypothetical protein	NA	NA	NA	NA
BBE26960.1\|1757754_1759878_-\|protease	ATP-dependent Clp protease ATP-binding protein	K4FB40	Cronobacter_phage	2.5e-115	38.7
BBE26961.1\|1760217_1760835_+	membrane protein	NA	NA	NA	NA
BBE26962.1\|1760807_1761512_-	hypothetical protein	NA	NA	NA	NA
BBE26963.1\|1761788_1762502_-\|integrase	integrase	W5R8L2	Staphylococcus_phage	2.1e-42	40.4
1762734:1762806	attR	NA	NA	NA	NA

DBSCAN-SWA_10

1799134 : 1828946

Staphylococcus_prophage(20.0%)

integrase,transposase

attL 1822847:1822883|attR 1826571:1826607

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
BBE27003.1\|1799134_1800055_+\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	7.1e-51	38.2
BBE27004.1\|1800026_1801286_+	hypothetical protein	NA	NA	NA	NA
BBE27005.1\|1801440_1802148_-	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
BBE27006.1\|1802161_1803013_-	L-xylulose 5-phosphate 3-epimerase	NA	NA	NA	NA
BBE27007.1\|1803015_1803654_-	3-hexulose-6-phosphate synthase	NA	NA	NA	NA
BBE27008.1\|1803665_1803971_-	ascorbate-specific PTS system IIB component	NA	NA	NA	NA
BBE27009.1\|1803991_1805509_-	ascorbate-specific PTS system IIC component	NA	NA	NA	NA
BBE27010.1\|1805529_1806009_-	ascorbate-specific PTS system IIA component	NA	NA	NA	NA
BBE27011.1\|1806053_1807127_-	L-ascorbate-6-phosphate lactonase	NA	NA	NA	NA
BBE27012.1\|1807337_1808822_+	hypothetical protein	NA	NA	NA	NA
BBE27013.1\|1808898_1809129_-	hypothetical protein	NA	NA	NA	NA
BBE27014.1\|1809294_1809789_-	hypothetical protein	NA	NA	NA	NA
BBE27015.1\|1809895_1810393_+	hypothetical protein	NA	NA	NA	NA
BBE27016.1\|1810459_1810813_+	hypothetical protein	W5R8L2	Staphylococcus_phage	5.7e-17	45.1
BBE27017.1\|1810935_1811838_+	hypothetical protein	NA	NA	NA	NA
BBE27018.1\|1812095_1813436_+	catalase	A0A2K9L572	Tupanvirus	8.9e-95	39.9
BBE27019.1\|1813479_1813920_-	alkaline-shock protein	NA	NA	NA	NA
BBE27020.1\|1813944_1814370_-	alkaline-shock protein	NA	NA	NA	NA
BBE27021.1\|1814385_1814580_-	hypothetical protein	NA	NA	NA	NA
BBE27022.1\|1814585_1815134_-	hypothetical protein	NA	NA	NA	NA
BBE27023.1\|1815152_1815404_-	transglycosylase associated protein	NA	NA	NA	NA
BBE27024.1\|1815528_1816419_-	short-chain dehydrogenase/oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	5.2e-59	46.2
BBE27025.1\|1816441_1817230_-	protein tyrosine phosphatase	NA	NA	NA	NA
BBE27026.1\|1817269_1817539_-	hypothetical protein	NA	NA	NA	NA
BBE27027.1\|1817708_1819409_+	bifunctional glycosyl transferase, family 8	NA	NA	NA	NA
BBE27028.1\|1819485_1820406_-\|integrase	integrase	Q9MBM9	Staphylococcus_prophage	9.2e-51	38.2
BBE27029.1\|1820543_1820801_-	hypothetical protein	NA	NA	NA	NA
BBE27030.1\|1821083_1821302_+	hypothetical protein	NA	NA	NA	NA
BBE27031.1\|1821301_1821478_+	hypothetical protein	NA	NA	NA	NA
BBE27032.1\|1821658_1822108_+	hypothetical protein	A0A1V0SJW0	Klosneuvirus	3.4e-06	33.1
BBE27033.1\|1822246_1822807_-	hypothetical protein	NA	NA	NA	NA
1822847:1822883	attL	NA	NA	NA	NA
BBE27034.1\|1822962_1824021_-	hypothetical protein	NA	NA	NA	NA
BBE27035.1\|1824039_1824963_-\|integrase	integrase	W5R8L2	Staphylococcus_phage	1.7e-49	40.6
BBE27036.1\|1825185_1825551_+	hypothetical protein	NA	NA	NA	NA
BBE27037.1\|1826671_1826845_+	hypothetical protein	NA	NA	NA	NA
1826571:1826607	attR	NA	NA	NA	NA
BBE27038.1\|1826932_1827376_+	hypothetical protein	H7BVY4	unidentified_phage	6.1e-08	32.8
BBE27039.1\|1827356_1827599_+\|transposase	transposase	H7BVY4	unidentified_phage	2.1e-07	48.2
BBE27040.1\|1827708_1828245_+\|transposase	transposase	NA	NA	NA	NA
BBE27041.1\|1828241_1828946_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	4.6e-34	40.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. AP018699

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection