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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018393 Lactobacillus paracasei plasmid pLPS-1 IJH-SONE68 DNA, complete genome 0 crisprs NA 0 0 0 0
AP018394 Lactobacillus paracasei plasmid pLPS-2 IJH-SONE68 DNA, nearly complete genome 0 crisprs NA 0 0 0 0
AP018392 Lactobacillus paracasei IJH-SONE68 DNA, complete genome 2 crisprs DinG,WYL,DEDDh,csa3,cas3 0 0 12 0

Results visualization

1. AP018392
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018392_2 780810-780940 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018392_3 1930931-1931048 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17098 : 56818 40 Acidithiobacillus_phage(33.33%) protease,transposase NA
DBSCAN-SWA_2 60003 : 118646 58 Staphylococcus_prophage(22.22%) protease,holin,transposase NA
DBSCAN-SWA_3 151567 : 189811 46 Moraxella_phage(40.0%) transposase NA
DBSCAN-SWA_4 367434 : 427306 56 Lactobacillus_phage(28.57%) transposase NA
DBSCAN-SWA_5 573101 : 641901 91 Lactobacillus_phage(60.0%) transposase,integrase attL 593106:593118|attR 605350:605362
DBSCAN-SWA_6 653897 : 674569 27 Staphylococcus_phage(28.57%) holin,transposase NA
DBSCAN-SWA_7 814862 : 827451 19 Lactococcus_phage(20.0%) terminase,protease,head,tail,integrase,portal attL 813961:813974|attR 830227:830240
DBSCAN-SWA_8 1138619 : 1242546 96 Bacillus_phage(17.39%) protease,tRNA,transposase NA
DBSCAN-SWA_9 1910665 : 1995416 94 Lactobacillus_phage(75.47%) tRNA,terminase,protease,head,capsid,tail,holin,transposase,integrase,portal attL 1931020:1931044|attR 2001004:2001028
DBSCAN-SWA_10 2023478 : 2144591 112 Planktothrix_phage(16.67%) protease,tRNA,transposase,integrase attL 2061919:2061934|attR 2080475:2080490
DBSCAN-SWA_11 2166252 : 2201451 35 Streptococcus_phage(18.18%) protease,tRNA,transposase,coat NA
DBSCAN-SWA_12 2534424 : 2557733 27 Staphylococcus_prophage(33.33%) transposase,bacteriocin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage