CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP034587	Streptomyces luteoverticillatus strain CGMCC 15060 chromosome, complete genome	4 crisprs	csa3,WYL,DEDDh,cas4,Cas14u_CAS-V,Cas9_archaeal,cas3,DinG,c2c9_V-U4	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP034587_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034587_1

1630980-1631092

Orphan

Consensus_repeat	Method
GCGTTACTTCTTCTTGCCGCGCTTCTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034587_1

>merge|CP034587|1|1630980-1631092|CRISPRCasFinder
GCGTTACTTCTTCTTGCCGCGCTTCTCGCTGCTGTGCCCACCCGGGGGGTGACCCCCGGACCCCCAGCCGCTCCGGGGCACCCGGCGTTACTTCTTCTTGCCGCGCTTCTCGC

>CP034587|1|1|1630980-1631092|CRISPRCasFinder
GCGTTACTTCTTCTTGCCGCGCTTCTCGC	TGCTGTGCCCACCCGGGGGGTGACCCCCGGACCCCCAGCCGCTCCGGGGCACCCG
GCGTTACTTCTTCTTGCCGCGCTTCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
CP034587.1\|AZQ75413.1\|1619166_1620339_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173840
CP034587.1\|AZQ75414.1\|1629642_1630419_+\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ75417.1\|1641964_1644109_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
CP034587.1\|AZQ70965.1\|1638672_1639218_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
CP034587.1\|AZQ70953.1\|1623703_1624723_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
CP034587.1\|AZQ70957.1\|1628118_1629369_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340847
CP034587.1\|AZQ70961.1\|1635200_1635563_+\|DUF952-domain-containing-protein	unknown	unknown	gnl\|CDD\|377607
CP034587.1\|AZQ70958.1\|1630577_1630940_+\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ70954.1\|1624826_1625042_-\|proteinase-inhibitor-I78	unknown	unknown	gnl\|CDD\|288556
CP034587.1\|AZQ75416.1\|1640655_1641771_-\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
CP034587.1\|AZQ70966.1\|1639202_1640333_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
CP034587.1\|AZQ70955.1\|1625473_1627162_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238832
CP034587.1\|AZQ75415.1\|1632592_1633180_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
CP034587.1\|AZQ70962.1\|1635659_1636964_-\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
CP034587.1\|AZQ70952.1\|1622045_1623440_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379080
CP034587.1\|AZQ70951.1\|1620441_1622028_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
CP034587.1\|AZQ70964.1\|1637598_1638603_-\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|280735
CP034587.1\|AZQ70960.1\|1633224_1633926_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
CP034587.1\|AZQ70963.1\|1636963_1637602_-\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
CP034587.1\|AZQ70956.1\|1627171_1628122_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034587.1\|AZQ75413.1\|1619166_1620339_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	0
CP034587.1\|AZQ70953.1\|1623703_1624723_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	9.99729e-29
CP034587.1\|AZQ75417.1\|1641964_1644109_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.78671e-09
CP034587.1\|AZQ70965.1\|1638672_1639218_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.00169055
CP034587.1\|AZQ70957.1\|1628118_1629369_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	3.43861e-100
CP034587.1\|AZQ70961.1\|1635200_1635563_+\|DUF952-domain-containing-protein	gnl\|CDD\|377607	pfam06108, DUF952, Protein of unknown function (DUF952). This family consists of several hypothetical bacterial and plant proteins of unknown function.	5.33448e-20
CP034587.1\|AZQ70954.1\|1624826_1625042_-\|proteinase-inhibitor-I78	gnl\|CDD\|288556	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family. This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78.	2.93588e-06
CP034587.1\|AZQ75416.1\|1640655_1641771_-\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
CP034587.1\|AZQ70966.1\|1639202_1640333_-\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	5.27495e-87
CP034587.1\|AZQ70955.1\|1625473_1627162_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238832	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits in ubiquinol oxidase varies from two to five. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons from ubiquinol to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from ubiquinol on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. It is generally believed that the channels contain water molecules that act as 'proton wires' to transfer the protons. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are believed to be transferred directly from ubiquinol (the electron donor) to the low-spin heme, and directly from the low-spin heme to the binuclear center.	0
CP034587.1\|AZQ75415.1\|1632592_1633180_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.05011e-37
CP034587.1\|AZQ70962.1\|1635659_1636964_-\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.60535e-81
CP034587.1\|AZQ70952.1\|1622045_1623440_+\|hypothetical-protein	gnl\|CDD\|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	9.23652e-06
CP034587.1\|AZQ70951.1\|1620441_1622028_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	5.98097e-111
CP034587.1\|AZQ70964.1\|1637598_1638603_-\|segregation/condensation-protein-A	gnl\|CDD\|280735	pfam02616, SMC_ScpA, Segregation and condensation protein ScpA. This is a family of proteins that from part of the condensin complex that regulates chromosome segregation. This is the A subunit, which binds to the ScpB subunit, pfam04079, and SMC, pfam02463, to participate in chromosomal partition during cell division. The condensin complex pulls DNA away from the mid-cell into both cell halves. These proteins are part of the Kleisin superfamily.	2.49238e-52
CP034587.1\|AZQ70960.1\|1633224_1633926_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	3.00958e-101
CP034587.1\|AZQ70963.1\|1636963_1637602_-\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	4.23062e-67

>CP034587.1|AZQ70958.1|1630577_1630940_+|hypothetical-protein
MYSYEPARTSYNHIPGMRPPRDASSESHPTSVTPIFDALCSEYRRAFRALPGDRSGEEELTFKAFGHRGTYGYAGQLTGPAAYPGSSGYNAVWDSYYGRQRGGQLPALPPGQRDGRGRGF
>CP034587.1|AZQ75414.1|1629642_1630419_+|hypothetical-protein
MLDVSDEVRAEIGDEEAERLLGGENAPDVYDCTSCRTPGHTGQVPTSTVLFVGEETAVLAFAHASCIPSQVVPVAEAQLQGAVASITAEGGEGTAVRREMPLQAELGVTSGLVLVGGEVQPALVVEPLGPIARPGTSGPVDVFLELLHEQGFAPVADVEQAPAALPGWSVLLAMGRLHAVLQPPAGGTAPQAWWQAHQAMQVADGWRAAVNKTRRVLVYCAPAGTIGSQPREDLLREALDRAAAAGRLVGAAMPLAGT
>CP034587.1|AZQ70957.1|1628118_1629369_-|glycosyltransferase-family-4-protein
MRISFLIHNAYGIGGTVRTTSTLAGTLAEQHDVEIVSVFRHREEPALAPGGKVRLRHLVDLRRGGPGYEGDDPDHGRPAVVFPAAEGRHGQYSALTDRRIAEHLRRLDCDVVVGTRPGLNVHIAQQARRGPVRVGQEHLTLGTHSERLKRVLRTHYPRLDAVTTVTEADARTYRRLMRLPGVRVEAVPNGVPAPAVAPADGSGKWVIAAGRLAPAKRYDVLVRAFALVVAERPDWRLRVYGAGAERPRLRALIEKLGLYNHVYLMGPANPLEAEWVKGSIGAVTSSLESFGMTIVEAMRCGLPVVATDCPHGPGEIITDGADGLLVPVGRTEAIAAALLRLIGDDELRRRMGAAALASSARFDPAAVAARYETLFAGLRTRGGLRGGLHRTRGALLSTAFQAKDRGRSALRKVRAA
>CP034587.1|AZQ70956.1|1627171_1628122_-|hypothetical-protein
MTPTPTHPTVPARADDRPAPTTTSEECVIVSAPPLSAGAGNPSADCIADSAGGLTFDLDAPGRAADAHWSAALVLRLRGGEEDEEVRLPLTPNGTGRLRAVLPSTVALPEGRWDVHLDCGEETPRRLLPGLADLRSLIDRRPGPSTSPLAVRIPYATKHGNLSLRSWQRAPHAEAGDVLVDPDGITVRGTLHRVEDPGAWLAGAVVEARCRRAGLTVTVPLTAAEGQDFAFALPFAGLCEEWRGGPQVWDLWLRGPEGTPVRLARILDDVADKKHVFVYPARDVTAPHAPAQAGPYYTADNDLSVRVVERPPAAGR
>CP034587.1|AZQ70955.1|1625473_1627162_+|cytochrome-c-oxidase-subunit-I
MGTDTAQAAAAGPAGPAGERSPGRIIVDWLTTTDHKKIGNLYLITSFGFFLIGGLLAMLMRAELARPGLQLMTNEQFNEAFTAHGTIMLLLFATPAFAGFANAIMPLQIGSPDVAFPRLNMFAYWLYLFGGLIVVSSLLMPEGGAAFGWTAYAPLNSAVRSPGMGADMWIMGLALSGFGTILGAVNFLTTIIGMRAPGMTMFRMPVFTWNVLFTSILILLAFPVLAAALLSLEADRRFGALVFEPQWGGALLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFSRKPIFGYLTLVGATMTITALSVVVWAHHMFATGAVLLPFFSFMSFLIAVPTGVKFFNWIGTMWKGSLSFETPMLWAVGFLVSFLFGGLTGVILASPPLDFHVTDTYFVVAHFHYVVFGTVVFATFAGFYFWWPKLTGKMLDERLGKMHFWTLFTGFHLTFLVQHWLGAEGMPRRYADYLAADGFTALNTVSSIGAFLLGLSNLPFFHNIWKTARYGKKIEVDDPWGYGRSLEWATSCPPPRHNFLTLPRIRSESPAFDLHHPETVRPEQPHAAAESTG
>CP034587.1|AZQ70954.1|1624826_1625042_-|proteinase-inhibitor-I78
MATLPGLPADPDDDPDAYVGLPTDEATARALAQGWTDVRTLPPGAIVTMEYRAGRLNLEVEHGTVRRCWKG
>CP034587.1|AZQ70953.1|1623703_1624723_+|phosphatase-PAP2-family-protein
MRTNDELVPAEERSQPVRPRMTRTRLGIFVATSVVYVAIVVGVLTTSWPVRFDWQVMLFRPYKQWPEIHAFLDYFVVLGQRGPTAVAVAAWLGWCTYKQKTLRPLLVLGTSLLLLNATVGAAKIGMGRLGPHYATAVGSNEMFAGGDIFPSGHTANAVVTWGVLAYLATTPRTRRISSVCAAMLALGVGMTTVYLGTHWMSDVTLGWTAGLLVLLALPWFEPLMARAEGWLLGVWLRLRSGRLLTAPVPAPVAASVPLGAPRAPADDELPVREPVGAGSRSGGGSAARVAEGRAHLAPRPHTVRSERSPVTPAGSRRPPHADRMPRGTSFGPSAGRGRA
>CP034587.1|AZQ70952.1|1622045_1623440_+|hypothetical-protein
MRSRPWGRGNQLGTNEPRRYQGASESTAYANPDGTHVAPLTSPGWDNRSVTVRASSVSRAPASAGISGDGPTGISVGVPVGGRPARPLAVRVRAALRRAAPALLLYAAVRVLGVVALALWGPADGKEARHLLSARWDSIWYARIAEQGYGYTLQLAGGKVHSDLAFFPLLPWLERSLSAIFPLSAGDAGLVVSAVASLAAAWGIFAVGALRYGRRAGVALAVLWAALPVGVVESMAYSESLFTALAAWGLYCVLTGRWAWAGALAALAGLTRPVGAAVVAAVWLTAAVVLVRARRRGEAPPFGRVLPGVVLAPLGWLAYVAWVGVRTGSVTGYLDVQGGWGNGFDGGLAFGSFIWERLTGPAWPAGVALLLGVALVIRLYLAGVRQGQPLPLLVYTGTVLLLALTAKGYFGSKPRLMLPAFPLLLPLAVALARLRTVRAVPVMTAVALASAAYGAFWLHGSGPP
>CP034587.1|AZQ70951.1|1620441_1622028_-|MFS-transporter
MSGTTTAGPRRPVGVPRQRLRPRRAEGPGAASSSRWTVLVVLCVSLLLVAVDATVLHVAVPAVTEDLRPGAIQLLWIVDVYPLVCASLLILFGTLGDRVGRRRVLLLGYTLFGVASGLAAVAPTPEILIAARALLGAGGAMIMPATLSILRQVFPDRRERALAIGVWSAVAAVGAAVGPLLGGFLLEHFWWGSVFLINIPLMAVSLPVGRWLLPESTGDHDGPWDVLGALMAAFGLFGVVYGVKRVGGAEALSLGTIVPAAVGAALLVLFVRRQRRRAHPLVDLTLFTRPAFGTSVGCIVLAMLALVGLELIAAQYLQLVLGLTPLETGLRLLPLTLAAMAAGLAGSRVLQRFGPRAMVSAGFVLTAMAVLSLTVMGPEDRPYALIAGFVLLGFGLETTLFGAYESMLSEAPARAAGGAAAIGETSYQLGAGIGIALLGSVMNAAYAPGVDAVPGVPSAAGRAASHSLGEAYEVAARLDGPAGTALRAAARDAFVHGLHVTLAVSAGLLALGAVAALRLPRGLEPTEG
>CP034587.1|AZQ75413.1|1619166_1620339_-|acyl-CoA-dehydrogenase
MTVFDPHDPLGIDDLLTDEDRAIRDSVRSWARDRVLPHIAEWYESGEVPVRELARELGAMGALGMQLTGYGCAGASAVQYGLACLEVEAADSGIRSLVSVQGSLAMYAIHRFGSEEQKRRWLPGMAAGEIIGCFGLTEPDHGSDPGGMRTYAKRDAGGDWLLTGRKMWITNGSVAGVAVVWARTDEGIRGFVVPTDSPGFSAPEIKHKWSLRASVTSELVLDEVRLPADAVLPEAKGLGGPLGCLNHARYGIVWGAMGAARTCFETALDYARTREQFGRPIGGFQLTQAKLADMALELHKGVLLAHHLGQRMDAGRLRPEQVSFGKLNNVREAIEICRTARTVLGANGISLEYPVMRHATNLESVLTYEGTVEMHQLVLGKALTGLDAFR
>CP034587.1|AZQ75415.1|1632592_1633180_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MYGLWKPRVLGAWRVPAAGPCILAVNHTHNVDGPMIMGTAPRPVHFLIKKEAFVGPLGPFLRGIGQLEVDRSGTDRTAITGALGVLEDGGVLGIFPEGTRGEGDFASLRAGLAYFAVRSGAPIVPVAVLGSGERKSRAVRGLPPLRSRVDVVFGDPFEAGDGSGRRTRKALDEATTRIQERLGAHLADAKRLTGR
>CP034587.1|AZQ70960.1|1633224_1633926_-|(d)CMP-kinase
METAARTAPAAVVVGIDGPSGTGKSSTSKAVAAKLGLRYLDTGAQYRAITWWMLSNGIDVNDPAAVADAAGKPEIVSGTDPSAPTITVDGADASAPIRTQEVTGAVSAVSAVPEVRTRMTELQRAIAAEAPYGIVVEGRDIGTTVLPDADVKIFLTASPEARAARRSGELKGKEAVDLAATRAALVKRDAADSGRKTSPLAKAADAVEVDTTELTLEQVIECVVTLVEEKRSA
>CP034587.1|AZQ70961.1|1635200_1635563_+|DUF952-domain-containing-protein
MIYHVVPLDDWLAVPDRPYSPASLSEEGFVHCSPDEETTLAVATAFYREVPGPLMVLLIDEHKLDVMVRWEAADPAPPPGVAPGTLFPHVFGRITRDAVEGMMEIQRDEEGRATGLTVWS
>CP034587.1|AZQ70962.1|1635659_1636964_-|rRNA-pseudouridine-synthase
MRSSGRNSGSGDRDNRGARGGSPRPGSGGGRPGGGRSGGGRPESGGRSGGGYGGGGYGGRSEGGRYDGGRGGDRRDDRRDDRRDDRQQERPRRPRPEERRYDVGPDAERTRGGATSGRQSGPTSGRGAAARGGAKGGPKRSSTAGSGGRSSGPARGHGYAPARPRELDAKIEERNRERHNKPQVKTPKTFPGAEQEGERLQKVLARAGMGSRRACEELIEMARVEVNGQIVTEQGLRVDPEKDEIKVDGLTVATQSYLFFALNKPAGVVSTMEDPDGRQCLGDYVTNRETRLFHVGRLDTETEGIILLTNHGELAHRLTHPKYGVQKTYLAAITGPLPRDIGKQLKSGIQLEDGWARADNFRVIQQTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVEKLVRTSFGPIALGDQKSGWLRRLTNTEVGMLMREVDL
>CP034587.1|AZQ70963.1|1636963_1637602_-|SMC-Scp-complex-subunit-ScpB
MTESTTYPEGLAGLALKPALEAVLMVVDEPATDEHLAKVLDRPRREIADALRELADEYTIQGRGFELRQVAGGWRFFTRPEYADAVEAFVLDGQQARLTQAALETLAVVAYRQPVSRSRVSAVRGVNCDGVMRTLLQRGLVEEAGTEPETGAILYRTTNYFLERMGLRGLDELPELAPFLPEAEAVEGDSPEGVPSFDPDAPDTEADDKTEL
>CP034587.1|AZQ70964.1|1637598_1638603_-|segregation/condensation-protein-A
MPAAASSPARRPLGPGPGPRPEPARPGGATTPDERLAAEPAASETPAGGEGRFTVRLANFEGPFDLLLQLIAKHKLDVTEVALSKVTDEFMAHLRAMGPDFDLDQTTEFLVVAATLLDLKAARLLPAAEVEDEADLALLEARDLLFARLLQYRAYKRIAEIFSGRLAHEGRRHPRTVGLEPHHAELLPEVVLGIGPERLAELAAKAMRPKPPPQVYVDHIHAPLVSVREQAEVVVARLRTSGEATFAQLTADAADTLTVVARFLALLELYREKAVALDQGEALGALTVRWTGGTADAAPLVTDEFDREPETDPETGSETGPETDPETDPEESAR
>CP034587.1|AZQ70965.1|1638672_1639218_-|hypothetical-protein
MSRRVSLPGADELFRTTGGMGLQASSPRRKANGETPPRVPGPGDAPDGERPGKTTAAVPEGRTAAVPPAAAGQEPEAERRTAAPQPPAARNTVEPAAAQPKRRGRASGRRPSGRERHDEKITVYVSAEELMDLEHARLVLRGEHGLAVDRGRIVREAVAVVLADLEQRGDASILVRRLRGR
>CP034587.1|AZQ70966.1|1639202_1640333_-|ParA-family-protein
MSALGQSPVGLHAVGSVAVHTYSALAAHQDIQSMTTAHQSMDGHHMNAMAGDGAESTRLADYENVPEGHFYDPDAEYEPDPEYAATLAPDAARQRRERIGPTGRPLPYFPIPGPLADHGPAKIIAMCNQKGGVGKTTSTINLGAALAEYGRRVLLVDFDPQGALSVGLGVNPMELDLTVYNLLMERGMQADEVLLKTAVPNMDLLPSNIDLSAAEVQLVSEVARESTLQRALKPLMADYDYIVIDCQPSLGLLTVNALTAAHKVIVPLECEFFALRGVALLTETIEKVQERLNPDLELDGILATMYDSRTVHSREVLARVVEAFDDHVYHTVIGRTVRFPETTVAGEPITTYASNSVGAAAYRQLAREVLARCHAE
>CP034587.1|AZQ75416.1|1640655_1641771_-|alanine-dehydrogenase
MKVGIPREVKNNEFRVAITPAGVLELVRNGHQVFVEKGAGTGSSITDAEYVAAGAAILDSADEVWATADLLLKVKEPIAEEYHRLRKGQTLFTYLHLAASRECTDALLESGTTAIAYETVELANRALPLLAPMSEVAGRLAPQVGAYHLMRSVGGRGVLPGGVPGTHAGKAVVIGGGVSGWNAAQIAVGMGFHVTLLDRDINKLREADKVFGTKVQTVVSNAYELEKAVVEADLVIGAVLIPGAKAPKLVTNELVAKMKPGSVLVDIAIDQGGCFEDSRPTTHAEPTFQVHDSVFYCVANMPGAVPNTSTYALTNATLPYIVELANRGWQEALRRDAALAKGLNTHEGQVVYGPVAEAHGLPHVELSTLLG
>CP034587.1|AZQ75417.1|1641964_1644109_-|tetratricopeptide-repeat-protein
METGGPAVVPPERRPVGPAPVVSPRQRPTRTPSFTTQRTELFVGRQRELKELRADIVRAGLDTLSGRKKPRGRVLLIAGRPGSGRTALAEELARQLAVDYPDGVLRARLTGADGAPVPTERTARALLAELGAPVPAGAEEDQLTQALRDALHGRRVLLVLDDAAGAEQVDPLLPDEPECLIVAVSRGPLTGVPDVRPCALGGLDTPAAVELLEWFAGPTRITCDPVAAKTVVEECGGQPAALVLVGGWLAAQPKTTVVDAAKRLRELPPADGHDKGGRLLARAFWLAYEALPAPTARLLHLLALAPAGLADAHTASALAGTSLTTAQSVLEDLTARGLLRLETPGEGPEGLPPQYRVPTCLAPLLGTLLHAQERPGEIELARARMLERTVRQLHSCRATTERNDPAVRRRIEQLPRPLRFPSRRAAEEWLLARLPALLAAARLAVEDGRLDTLARRLVSALTRALTAHLGPEAAAPELYGLHQLVLDVARRCEMPLEKAAALLNLGDLDARAGRTPEALDRYRQALASAREAGDPYATSRALESIGAAHQELGDFQRAADWYRRGLELRLTRGELADEARLYGRLGTVHGYAGQWPEALRDWRAAAAAHRRLRDHAGHARALGEAARAQEHTGRPREAARTALEAVESAQAAGDARLEAALRLLLAETLERLGDAAGALRHRGCAERLLDGPGAPGPAGGPGASDEGVEPPGVQ

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Crispr_ID: CP034587_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034587_2

1700839-1700949

Orphan

Consensus_repeat	Method
AATACGACGCAGGAGGCCGGTCGATGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034587_2

>merge|CP034587|2|1700839-1700949|CRISPRCasFinder
AATACGACGCAGGAGGCCGGTCGATGAGCGGTACGCACGGATCCGGCTGGGGGTCCGGGGGTTATCCCCCGGGGAAGAACAGCAATACGACGCAGGAGGCCAGTCGATGAG

>CP034587|2|2|1700839-1700949|CRISPRCasFinder
AATACGACGCAGGAGGCCGGTCGATGAG	CGGTACGCACGGATCCGGCTGGGGGTCCGGGGGTTATCCCCCGGGGAAGAACAGC
AATACGACGCAGGAGGCCAGTCGATGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP034587.1\|AZQ71002.1\|1695709_1695949_-\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ71003.1\|1696282_1696603_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215214
CP034587.1\|AZQ71010.1\|1703931_1704213_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
CP034587.1\|AZQ71013.1\|1706417_1708067_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
CP034587.1\|AZQ75426.1\|1708063_1708435_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
CP034587.1\|AZQ75423.1\|1687410_1688058_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380320
CP034587.1\|AZQ75427.1\|1710236_1710863_-\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|377946
CP034587.1\|AZQ75424.1\|1693804_1695037_+\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
CP034587.1\|AZQ71001.1\|1695101_1695620_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
CP034587.1\|AZQ71004.1\|1696723_1697485_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|236124
CP034587.1\|AZQ70999.1\|1688432_1689143_+\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|381605
CP034587.1\|AZQ71006.1\|1698348_1699347_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
CP034587.1\|AZQ71000.1\|1689222_1691763_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
CP034587.1\|AZQ71015.1\|1710994_1711876_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
CP034587.1\|AZQ71009.1\|1702436_1703837_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
CP034587.1\|AZQ71014.1\|1708731_1710282_+\|peptidase-S8	unknown	unknown	gnl\|CDD\|173810
CP034587.1\|AZQ71012.1\|1705295_1706342_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
CP034587.1\|AZQ71011.1\|1705025_1705274_+\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ75425.1\|1704433_1704817_+\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630
CP034587.1\|AZQ71005.1\|1697490_1698210_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824

Protein	Function_ID	Function_description	E-value
CP034587.1\|AZQ75427.1\|1710236_1710863_-\|lysoplasmalogenase	gnl\|CDD\|377946	pfam07947, YhhN, YhhN family. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.	2.75476e-22
CP034587.1\|AZQ71003.1\|1696282_1696603_-\|hypothetical-protein	gnl\|CDD\|215214	PLN02381, PLN02381, valyl-tRNA synthetase.	0.00766291
CP034587.1\|AZQ71010.1\|1703931_1704213_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	9.69863e-08
CP034587.1\|AZQ71013.1\|1706417_1708067_-\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
CP034587.1\|AZQ75426.1\|1708063_1708435_-\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	4.88911e-29
CP034587.1\|AZQ75423.1\|1687410_1688058_+\|nitroreductase-family-protein	gnl\|CDD\|380320	cd02144, iodotyrosine_dehalogenase, iodotyrosine dehalogenase. Iodotyrosine dehalogenase catalyzes the removal of iodine from the 3, 5 positions of L-tyosine in thyroid, liver and kidney, using NADPH as electron donor. This enzyme is a homolog of the nitroreductase family. These enzymes are usually homodimers.	6.54063e-113
CP034587.1\|AZQ75424.1\|1693804_1695037_+\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.01511e-92
CP034587.1\|AZQ71001.1\|1695101_1695620_-\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	3.61021e-50
CP034587.1\|AZQ71004.1\|1696723_1697485_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	5.2086e-175
CP034587.1\|AZQ70999.1\|1688432_1689143_+\|lytic-transglycosylase	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	3.01405e-31
CP034587.1\|AZQ71006.1\|1698348_1699347_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.34352e-16
CP034587.1\|AZQ71000.1\|1689222_1691763_-\|FHA-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.49747e-75
CP034587.1\|AZQ71015.1\|1710994_1711876_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	1.30365e-36
CP034587.1\|AZQ71009.1\|1702436_1703837_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	2.37289e-134
CP034587.1\|AZQ71014.1\|1708731_1710282_+\|peptidase-S8	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	6.48818e-60
CP034587.1\|AZQ71012.1\|1705295_1706342_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
CP034587.1\|AZQ75425.1\|1704433_1704817_+\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	3.20407e-19
CP034587.1\|AZQ71005.1\|1697490_1698210_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.49729e-123

>CP034587.1|AZQ71006.1|1698348_1699347_-|pentapeptide-repeat-containing-protein
MRHGPRSFSVCLAVNHAVKVSWPATSLPTGSTRHARGTPSAVSAIREDAAPDADGGTDRDADRNADRAALKGDCGNCFGLCCVALPFARSADFARDKDAGKPCGNLQRDFSCGIHARLRDKGYQGCTVYDCFGAGQKVSQVTFGGRDWRAAPETSRTMFEVFPAMRHLHELLWYLTEALTLKDARPVHADLRRLLAETERLTEGDAASLAALDVGEHRQRVNVLLLRTSELVRAKGGRKAKNHRGADLMGRRLRRADLRCANLRGAYLIAADLSGADLRDADMIGADLRDADLSGADLTGAFFLTQPQLNAARGDAATRLPAGLARPGHWSV
>CP034587.1|AZQ71005.1|1697490_1698210_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MSRSVLVTGGNRGIGLAIARAFAEAGDKVAITYRSGEPPTALVNLGCLAVKCDITDPEQVEQAYKEIEEKQGAVEVLVANAGVTRDQLLLRMSEEDFTSVVETNLTGTFRVVKRASKAMLRARKGRVVLISSVVGLMGSPGQANYAASKAGLVGFARSLARELGSRNITVNVVAPGFVDTDMTRVLTDEQRAGIVGNVPLGRYAQPEEIAASVRFLASEDAAYITGAVIPVDGGLGMGH
>CP034587.1|AZQ71004.1|1696723_1697485_-|enoyl-[acyl-carrier-protein]-reductase-FabI
MSGILAGKRILVTGVLTESSIAFQAAKVAQNEGAEVILTGFGRLSLVERIAKRLPKPAPVIELDVTNQEHLDGLADKVREHVDGIDGIVHSIAFGPQGAFNFLEASWEDVSTAVQVSAYSYKSLAMALLPLMREGSSVVGLTFDAQIAWPKYDWMGVAKAALEGTNRYLARDLGPKGIRCNLVSAGPIKSMAAKSIPGFEELADVWNHRAPIGWDLADPEPAGRGVVGMLSDFFPRTTGEIVHVDGGVHMMGA
>CP034587.1|AZQ71003.1|1696282_1696603_-|hypothetical-protein
MSPPIRRAAVLLFATLALLGTTAIAPAPPTPREAECHTRLHGSHAVTHCFNGNATPDRVQLHVECVHWWDPGMDTAPVTVGPARHVVLAQRCWLGIRRAWVTHAPG
>CP034587.1|AZQ71002.1|1695709_1695949_-|hypothetical-protein
MPAGPQLPAAVSRRNRTRLTWWAVALPTAAFAVFLLLLTFLLTASPASADGPSDAGASGGGAVAQVMRFAWFAMEYLAP
>CP034587.1|AZQ71001.1|1695101_1695620_-|histidine-phosphatase-family-protein
MSSDPTRRIVILRHAKAEWSDGDDHERPLADRGRKDAPVAGRWLAGSGVTPELALCSTAARTRETWKLAVSELPERPRTVYEERLYEASLGELIALLNEVSDEVADLVLIGHNPGMHALADALAGEADGDLLARMNRSGFPTAAVAVLTFSGSWKSVEHGVGRLVAFWAPHA
>CP034587.1|AZQ75424.1|1693804_1695037_+|phosphoserine-phosphatase-SerB
MSASQIPAAAVATGDDVPTLLVKIFGKDRPGITAGLFDTLAAFAVDVIDIEQIVTRGRITLCALVTAPVGGGATEGGLRATVHSWAESMHLQTEIISGLGDNRPRGVGRSHVTVLGHPLTAESTAAIAARITDTGGNIDRIFRLAKYPVTAVEFAVSGTDTEKLRTTLATESAALGVDVAVVAAGLQRRAQRLVVMDVDSTLIQDEVIELFAAHAGCEAEVAEVTTRAMRGELDFEESLHERVALLAGLDASVVEKVRAEVRLTPGARTLIRTLKRLGFQVGVVSGGFTQVTDDLRERLGLDFASANTLEIVDGKLTGRVTGEIVDREGKARLLRRFAAEAGVPLAQTVAIGDGANDLDMLNAAGLGVAFNAKPLVREAAHTAVNVPFLDTVLYLLGVTREEVEAANTHE
>CP034587.1|AZQ71000.1|1689222_1691763_-|FHA-domain-containing-protein
MGHGVPELVLELNGQTWTLDPSRSYTLGRDPQGDMVLEDARVSWRHATVRWGGHGWLIEDHGSTNGTYVQGQRVHQMEIGPGAAVHLGNATDGPRLNLSAAAPAAPAAPAADIYSAQTAMAPAVQPGQPPQQYQQPGAQGWGHQPPQQYQQHQQVPQQGGWQQPYAQQAAQPQGQAPGAGGGESPTRFHQVAVGRVMRIGRALDNDLVVSDLQVSRHHAEFRATPGGFEIVDLGSHNGTYVNGQPVRQQLIGPQDTVGVGHSTFRLVGDRLEEFVDTGDVSFSARHLTVTVDGGKQILKDVSFGVPEKSLIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKELTVRKALRYAAKLRFPGDTAASEREARIDEVLRELKLDIHKDKKVTALSGGQRKRVSVALELLTKPSLIFLDEPTSGLDPGMDRDVMQLLRGLADDGRTVLVVTHSVAELALCDKLLVMAPGGSVAYFGPPEEALNFFGYETWADVFSAFENYRDYDWAGRWKGSQHYQMYAADIDAVAPQSVHVQPQVVRPPVPQSWGSQLWTLMRRYCSVIASDRGFLALMLLLPAVLGGVSTVIPSDYGLGAPAPRHFNQDAGTIMLILAVGACFSGAANSVRELIKERVIYERERAVGLSRSAYLMSKVVVLGAITAVQGVLICAIGFSVRKLPEHGVIIKALPAAELCLVIIALGFTSMMIGLVISSLVKTSEKTMPLLVMFAIVQVVFTGIMFKIYDSPGIEQVAWLMPSRWAIGAAGATLDLSHIMAPMDKNDPKNLDPLWEHSAGIWGLDMIALIAIGVVCGIAVARLLRRHEPEVMRK
>CP034587.1|AZQ70999.1|1688432_1689143_+|lytic-transglycosylase
MRSPISGYTRLTKVHTFSAAGIAAAGVAALAFAVVPNGSADAEQSQAVKPVAWNASAFGETQQAELNKQADRAAEQAKKDAESKKKAEAEAQAKAKADKERAEKEAASRSEERKPVAAAAAPAAPAPKVYANNLDGWIKESLDIMKAKGIPGSYNGIYRNIMRESTGNPNAINNWDSNAAAGIPSKGLLQVIDPTFKAYHVEGTSWNIYDPVANITAACNYAAKVYGSMDNVNSAY
>CP034587.1|AZQ75423.1|1687410_1688058_+|nitroreductase-family-protein
MPYRPVRMGAEESVGRAAELRERMAERRTVRRFSADPVPDQVVRDAIACAATAPSGAHQQPWTFVLVKDPEVRRRIREAAEEEERVSYAGRLGEEWLAALRPLGTDEVKPHLTDAPALIVVFQQRYWLGEDGSRRKHYYVDESVGIAVGMLLSALHLSGLAALVHTPSPMRFLSEVLGRPVNEKAFAVIPVGYPAADCEVPDLVRKSLDQVLVEI
>CP034587.1|AZQ71009.1|1702436_1703837_+|tyrosine--tRNA-ligase
MTRLGDSVARASALLAQDLSTDSAVEQLLTETKARRYLDLSDLAPKDQAELIASRTVEVLPGVAKLAERIEARQAEGKGLHIKLGIDPTATDVHLGHAVPLIILSRFQRLGHDVTLIIGDFTAKIGDPTGRTAERPPLTDEDIAHNLASYREQVRPFFDFDRVSFRQNSEWLAPYTFPELLGLLAQVPVSQLLQREDFRNRLAAGSGLTMTEMLYPIAQGLDSVALNCDVELGGADQLLNLQMGRKLMEAHGQKPQLVVTMPLIEGTDGTGAKMSKSKGNYVGLSASADDVFGKIMSVPDRLMEPYLKAWTEWTDAEIAQVLSRVEEKSLHPMDLKKILAGEVVAALYGMEAAMAARAGFVAQFSKKNFTDVETPVVELAEHGEEPATAVLSKVLGFQPSASAARRVAKQNGLRLVFETAEGQEAVVLPEAEAIRPLGEVARELLAGREATVYLKAGRKIAELRGL
>CP034587.1|AZQ71010.1|1703931_1704213_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MNWLWAIVVGLVLGLIAKAIIPGKQQIPLWLTILLGLAGALLGNWLASVLGVRHTSGIDWIRHLLQLLGAVILVAIGDRLWVGVRGDRRGRVG
>CP034587.1|AZQ75425.1|1704433_1704817_+|DUF3099-domain-containing-protein
MRKLGSAEVFRITGARQGLAEDVRGRQRRYVVSMGIRTLSVVLTVILWNIERYVAMGTLVLGALLPYVAVVIANAGRENAPSLPGTFIPAPTRPMLGGAPERPSGAPAEPVAEAGRPGRPDQGRDNG
>CP034587.1|AZQ71011.1|1705025_1705274_+|hypothetical-protein
MNSPNSSPNSPESAVICSAKGCRADAVWVLAWNNPKLHTPERRKTWLACDEHREHLSNFLSLRGFLKDVVTLAEWEASAAGR
>CP034587.1|AZQ71012.1|1705295_1706342_-|GTP-3',8-cyclase-MoaA
MAYAATSERTFKSGGRGRTVLTDTYGRTATDLRVSLTDRCNLRCVYCMPEEGLQWLAKPDLLTDDEIVRLVSVAVSALGVTEVRFTGGEPLLRPGLVSIVERCAALAPRPRLSLTTNGIGLARTARALAAAGLDRVNVSLDTLRPEVFIALTRRKRHQDVLDGLAAAHAAGLAPVKVNAVLMPGHNDDEAPDLLAWAIEHGYELRFIEQMPLDAQHGWKRDGMITAGEILASLRTRFTLTPEGEDARGSAPAERWTVDGGPARVGVIASVTRPFCAACDRTRLTADGQVRTCLFATEESDLRGALRSGATDEEIAGLWRTAMWGKKAGSGIDDPSFLQPVRPMSAIGG
>CP034587.1|AZQ71013.1|1706417_1708067_-|cation-acetate-symporter
MTPRTTVLTAAAHPLAAGGASEHRTLIITLFSVFVAATLGITVWAGRQTRDATDFYAGGRSFTGFQNGLAISGDYMSAASFLGIAGAISLYGYDGFLYSIGFLVAWLVALLLVAEPLRNSGRFTMADVLAHRLKQRPVRTAAGTSTIVVSIFYLLAQMVGAGALVALLLGATGEGARRWIIVLVGLVMVLYVTIGGMKGTTWVQIVKAVMLIAGTLLITFLVLNKFHWNLSTLLGRAADASGKGRAFLEPGLQYGKDGTSKLNFVSLGLALVLGTAGLPHILIRFYTVPTARAARKSVNWAIGIIGAFYLMTIALGFGAAALVGPKAIIASNESGNTAAPLLAQQVGGGAGSTGGAILLAVISAVAFATILAVVAGLTLASSASFAHDLWANVIRRGRTSEKEEILTAKLAAVVIGAVAIALGIFAHRLNAAALVALAFAVAASANLPTILYSLFWKRFTTQGALWSIYGGLISSVTLVILSPVVSGNPKALFPGMSFDYFPLGNPGLVSIPLGFALGWLGSLLSKPAPDQEKKYAELEVRSLTGYGAH
>CP034587.1|AZQ75426.1|1708063_1708435_-|DUF485-domain-containing-protein
MGIPPTAPDGPVEPARPTIPAQPDNFLDVQSSAEFGELRSAHRSFAFPLTVAFVSWYLLYVLLSNYAGGFMDTIVVGNINIALVFGLAQFLTTFLIAWWYARHAEANIDPKVEALKARLEAGE
>CP034587.1|AZQ71014.1|1708731_1710282_+|peptidase-S8
MAHLRLRRRRALLAAPLGLALTASLGFLPGAASAAPSAGVPAKAAVTTDGPLLSYVVNIKPGAPTTGLVKRSIERAGGTILVSYDKIGVIVAHSKNPHFAETLRSVPGVASAGATRTAPLRSAATTDYGKPEKLKLTKEGALAAARDAAAGKEPLEGLQWDLGAIGADKAAKINPGSRKVTVAVIDTGVDDTHPDLAPNFAADKSASCVTGKADTSPGAWRPHNPAKDYHGTHVAGTIAAARNGVGVAGVAPGAKVSAIKVSTPDDNAFFYAESVVCAFVFAADHGAGVTNNSYYVDPWMFNCPDHADQKAIADAVGRAAQYAQDKGVVNVAAAGNSNFDLASKEIADASSPNDSKPLPRKIDPKVCLDVPSQLPGVITVSATGVRGEKSFYSSYGLNSVDVAAPGGDILQVPELPAKDGRILSTMPGGDWAYLQGTSMASPHVAGVAALLKSAHPKSSPQEIQWLMKAQANNPGCPTAAYDPDGTGKWKATCAGTEHVNGFYGFGIVDALAAVRD
>CP034587.1|AZQ75427.1|1710236_1710863_-|lysoplasmalogenase
MPLLAAHVLLRGGPPLLAGALFLGCGGDTLLQVGGGTVFLLGMGSFAAGHVCYLLLFARHGSPGGARTYRLAALYAAAWLTVVVLLWPGLDGELRVPVAFYSLLLTAMALGATRARLLSGAGGALFLLSDTLLASGLAEWPQAPAPQFWVMLTYIAAQWLLTQGVLLCHGGHHVCTEEEAGRSPAGPSTRRGSGQSRTAARASTMPKP
>CP034587.1|AZQ71015.1|1710994_1711876_-|sterol-desaturase-family-protein
MPHLPDVVLWSIPAFVLLTALELVSYRLHPDDRSEGYEAKDAATSIGMGLGSLLFDALWKIPIVAIYTALYELTPLRVPVLWWTLPLTLLAQDFFYYWSHRGHHVVRILWACHVVHHSSRKFNLTTALRQPWTSLTVWPFYVPMVLAGVHPAAVAFCSSANLVYQFWVHTERVGRLPRPFEYVLNTPSHHRVHHASQGGYLDRNFGGILIVWDRMFGSFVPEGERPVYGLTKNIHTYNPLRVATHEYAAIGRDVKAARSWRERFGRVFRGPGWQPDRPAGGRTTPAAVPERVA

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Crispr_ID: CP034587_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034587_3

2266649-2266760

Orphan

Consensus_repeat	Method
ACTGGACTCGAACCAGTAACCTGCCGATTAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034587_3

>merge|CP034587|3|2266649-2266760|CRISPRCasFinder
ACTGGACTCGAACCAGTAACCTGCCGATTAACAGTCGGCTGCTCTGCCAATTGAGCTATAGAGGATCGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAG

>CP034587|3|3|2266649-2266760|CRISPRCasFinder
ACTGGACTCGAACCAGTAACCTGCCGATTAACAG	TCGGCTGCTCTGCCAATTGAGCTATAGAGGATCGCGCTCCCCCG
ACTGGACTCGAACCAGTAACCTGCCGGTTAACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP034587.1\|AZQ71435.1\|2259034_2260054_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
CP034587.1\|AZQ71438.1\|2262021_2262483_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
CP034587.1\|AZQ71444.1\|2265763_2266168_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
CP034587.1\|AZQ75482.1\|2276923_2277772_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379142
CP034587.1\|AZQ71447.1\|2270167_2272069_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
CP034587.1\|AZQ75483.1\|2278939_2279380_-\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ71442.1\|2264662_2265088_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|274650
CP034587.1\|AZQ71446.1\|2267333_2268773_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
CP034587.1\|AZQ71437.1\|2260905_2261931_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
CP034587.1\|AZQ71439.1\|2262553_2263069_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|183137
CP034587.1\|AZQ71441.1\|2264117_2264651_+\|class-F-sortase	unknown	unknown	gnl\|CDD\|320678
CP034587.1\|AZQ71440.1\|2263253_2263850_+\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ71448.1\|2272114_2273377_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
CP034587.1\|AZQ71449.1\|2273566_2274901_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
CP034587.1\|AZQ71451.1\|2275742_2276792_-\|hypothetical-protein	unknown	unknown	unknown
CP034587.1\|AZQ71452.1\|2278004_2278922_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235737
CP034587.1\|AZQ71443.1\|2265168_2265771_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
CP034587.1\|AZQ71450.1\|2275022_2275727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225500
CP034587.1\|AZQ71436.1\|2260054_2260864_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179898
CP034587.1\|AZQ71445.1\|2266982_2267270_+\|YtxH-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP034587.1\|AZQ71435.1\|2259034_2260054_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	8.75181e-168
CP034587.1\|AZQ71447.1\|2270167_2272069_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
CP034587.1\|AZQ71444.1\|2265763_2266168_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	4.46666e-37
CP034587.1\|AZQ71438.1\|2262021_2262483_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.68565e-17
CP034587.1\|AZQ71442.1\|2264662_2265088_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|274650	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein OsmC, or osmotically induced protein C. The member from Thermus thermophilus was shown to have hydroperoxide peroxidase activity. In many species, this protein is induced by stress and helps resist oxidative stress. [Cellular processes, Detoxification].	7.60423e-61
CP034587.1\|AZQ71446.1\|2267333_2268773_+\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	3.30631e-123
CP034587.1\|AZQ71437.1\|2260905_2261931_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
CP034587.1\|AZQ71439.1\|2262553_2263069_-\|isochorismatase-family-protein	gnl\|CDD\|183137	PRK11440, PRK11440, putative hydrolase; Provisional.	1.0583e-48
CP034587.1\|AZQ71441.1\|2264117_2264651_+\|class-F-sortase	gnl\|CDD\|320678	cd05829, Sortase_F, Sortase domain found in the class F family of sortases. Class F sortases are mainly present in Actinobacteria, Chlorobacteria and Firmicutes. Their functions are largely unknown.	7.37705e-41
CP034587.1\|AZQ75482.1\|2276923_2277772_-\|hypothetical-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	0.00099021
CP034587.1\|AZQ71448.1\|2272114_2273377_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	2.04586e-73
CP034587.1\|AZQ71449.1\|2273566_2274901_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
CP034587.1\|AZQ71452.1\|2278004_2278922_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235737	PRK06197, PRK06197, short chain dehydrogenase; Provisional.	5.84113e-116
CP034587.1\|AZQ71443.1\|2265168_2265771_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.47794e-61
CP034587.1\|AZQ71450.1\|2275022_2275727_+\|hypothetical-protein	gnl\|CDD\|225500	COG2949, SanA, Uncharacterized membrane protein [Function unknown].	6.54579e-53
CP034587.1\|AZQ71436.1\|2260054_2260864_-\|hypothetical-protein	gnl\|CDD\|179898	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated.	2.42967e-21

>CP034587.1|AZQ71444.1|2265763_2266168_-|thioredoxin
MSSSTVELTKDNFDEVVSGNGFVLIDFWAEWCGPCRGFAPVFERAAERHQDLVFAKVDTEAQPELAATFEIRSIPTLMIVRDNIAVYAQPGALPEAALEDIIKQARALDMDEVRASVEQARAEAEGAAAPGTDG
>CP034587.1|AZQ71443.1|2265168_2265771_-|histidine-phosphatase-family-protein
MAELLLIRHGETAWSRDGRHTSWTDLPLTERGERQAEALRPALEGRDIALVLTSPLVRAVRTAELAGLKGAETEPDLREWDYGGYEGVTTADIQRDRPGWFLFDDGVAPGPPEHPGESPEEVGARADRVLARIASRLADGVAGDVALVAHGHFLRVLTARRLGLPPSAGALFRLDTGTVSRIGTEHGRPALVAWNGRVGA
>CP034587.1|AZQ71442.1|2264662_2265088_-|OsmC-family-peroxiredoxin
MATNRIATTVWHGELIKGNGETTFESSGIGTYPVTWASRAEEANGKTSPEELIAAAHSSCFSMALSHSLTGAGTPPTRLETKAEVTFQPGEGITGIHLSVRGEVPGLDEEGFVAAAEDAKKNCPVSQALTGTTITLDAELA
>CP034587.1|AZQ71441.1|2264117_2264651_+|class-F-sortase
MPTSTPRSLTALLLVVAAVLLGACAPGGGTGKAIGGPARAEEPSRVAIPSLGVDSPLIRLGRNGDDTVQTPPPEKSMTAGWYRDSARPGTRGAAVIIGHDTAHDGKAVFRDLHRIAEGDAIDVERGDGEVLHFTVTGTEKVAGGAFPTRKVYAETREKALRLVTCAGDLIVHARMAP
>CP034587.1|AZQ71440.1|2263253_2263850_+|hypothetical-protein
MRPSSDPAPGSVAAFGPLEFQLVLLRRMADHQPGLVEDALRELGVGRAEMREANRRWQAMTRSPRGRGAGPRYRSVLGPPESTGERRVGDLTFEATTWRVPLWPGLRFEVLSAPGGAVWNEWLVRAPGARGPEPRTVEELRPWSCTVDEVARAFPPARPMEGTAPTRWRLAFTAPDAAGVRGEYVAEFTWGLLQRLIP
>CP034587.1|AZQ71439.1|2262553_2263069_-|isochorismatase-family-protein
MTELDPQRTALVLVDLMERLVALPLAPHPGDEVARNATELARSFRKAGAPVVVVRVERPGLAEQPPGSGLLAGVAEAGDIEIVKRTVGAFHGTGLDDRLRERGVRTLVLAGIATNLGVESTGRAAADHGYELVFVEDAMSALTAEEHRASVALDMPRLGTVVTAAELRLSA
>CP034587.1|AZQ71438.1|2262021_2262483_+|MarR-family-transcriptional-regulator
MTPPPRPADDALTLEVVDLIATVVARYHEEYEEAAARHSLTGAQARVLALLAREPLPMRRIALKLKCEPSNITGIVDRLEARDLVERRPDPDDRRVKLAAATEEGRLTAARLRESLRFAREPLAGLSEEERAALRDLLKRMLGEEPPAAGTAG
>CP034587.1|AZQ71437.1|2260905_2261931_-|NADP-dependent-oxidoreductase
MTATAARIPETSREWHLVARPVGWPKPEDFALREAAVPEVGEGQILVRNIHLSVDPYMRGRMDERESYIPPYQLDRPMDGGAVGEVLASRAEGYEVGDHVLHGLGWREYAVVDAARTAKVDPKVAPLSAYLGVLGMPGMTAYAGLLEVASFKEGDTVFVSGAAGAVGSLVGQIARLKGAARVIGSAGSDEKVRVLREEYGYDAAFNYKNGPVVDQLKEAAPDGIDVYFDNVGGEHLEAALSALNLHGRVTICGMIAQYNATEPVPGPRNMVNILAKRLRVQGMIVSDHDALRPQFVEEVGGWIRSGELKVRETVVEGIENTADAFLGLLRGENTGKMIVTL
>CP034587.1|AZQ71436.1|2260054_2260864_-|hypothetical-protein
MRDLVTGMSYLVKGQRWVGRNRRQWGFGLLPGLITLIGYAAVMTVLVLRADDVVDWATPFADGWGSPWLGLFRGALTALFFGGCLLLALLSFTAVTLLVGQPFYEALSERVDLAEGGSAPSSGLPLWRELWISARESLAVLVRAALWGVLFFALGFVPFVGQTVVPAIGFCVSGFFLTEELTAVALQRRRVALKERLELLRSRKLLVLGFGVPLTLLFLLPLVAVFVMPGAVAGATLLARDLMGETEEDGGAPDAGGADVVSAPPASEW
>CP034587.1|AZQ71435.1|2259034_2260054_+|aldo/keto-reductase
MSNDKISRVTLGDGGPEVGVQGLGCMGMSFAYGPTTDEAEARATLERALELGVTLYDTADMYGFGENEKFIAPFIRANREHVVLATKFAIDANPENPADRVIRNDPPYIREAVEGSLRRLGVEQIDLYYMHRRDPDVPLAESVGTMAELVAEGKVKHLGLSEVTGSELREAHAVHPIAAVQSEWSLFSRDIEENVVPTARELGVALVPYSPLGRGFLTGAFANADKDLSADDWRRTQPRFTGDNASANVALLEPLRRIAEARGVTLAQVALAWVQHRARVEDLTVVPIPGTRKRSRLEENVGATRLDLTADELTALEPIASKVSGDRYPDMSSTSAGRE
>CP034587.1|AZQ71445.1|2266982_2267270_+|YtxH-domain-containing-protein
MRYRLTFITGAAVGYVLGARAGRERYEELRKGARRIAQNPAVRNTAETAAVNGRALVTRTVDKVGDRLPGSVGERIRSLRERGQGVDDDWGTSNT
>CP034587.1|AZQ71446.1|2267333_2268773_+|sugar-kinase
MGIVAGLGSSSEGTSVVVCDAESGAVLRQGYAPHPAAAPEGDPQAWLISLGEAATGGVLEGVQAIGVAAQQHGLLTLDAGGVLVRPALLGNDKRVQSAAAELTDALGGRAAWAEAVGSVPQAGQPLAKLRWLARNEPESAARVAAVLQPHDWLVWQLLGRPLRRTTDRGDASGTGFWSAATGEWRPDLVELALGRQAALPHVLAPAEPAGHTPEGLLISAGTGETMAAAFGLGVGPGDAVVSLGASGSVFAVHHSALADGTGTITSFADATGMHLPVVHTLNAVRVLRGTAEMLGTDLPGLSELALRSSAGSYGLVLLPYLEGERTPHLPHTAGTLAGLRRESMKPEHLARAAFEGMLCGLTDALDVLRGRGVEVRRVFLLGAAAELPAVQAIAPSLFGAQVVVPQPADYAALGAARQAAWALGVQQGALSPQQPPLWPAAASQVFDMAGEDLAVGQAVRQQYATVREQTHPGAFDAVQ
>CP034587.1|AZQ71447.1|2270167_2272069_-|DNA-primase
MAGRINDDDVKAVRDAIPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPAKGLFYCFGCQEGGDTVDFVMKIDHLSFAETIERLASQAGITLRYEEGGYTPGRQQGERIRLVEAHKIAAKFYQDQLASPEAEIGRKFLAGRGFDQAAAEHFGVGYSPAGWDHLTRFLRGKGFSDKELLLSGLAQDSRSGKPIDRFRGRLMWPIRDITGEVIGFGARKLRDDDNGPKYLNTPETAIYKKSHVLYGIDLAKKDIAKTNRAVVVEGYTDVMACHLAGVTTAIATCGTAFAGDHIKILRRLLMDNAASEVVFTFDGDAAGQKAALRAFEDDQKFAAETSIAITPGGMDPCELRLAEGDAAVAALVESRTPLFAFAIRQGVARHNLDTAEGRAAALEAAAPIVANIKNSSIQHEYAVQLAGMLGILDTQFVVRRVGQLARWARERGQRPDAARTSVRQSAPPAATPAPQAQRGPALNLRSPAALTERELLKLALQHPHLVAPAFDAYGEDEFTAAPYVLVRRAVEAAGGVTHADAGYLTKVRDAAPDDTVRALVTELAVEAIRAKTVDEGYAGVQLVQVRLRAVERRIKDVQAGLVRLGDRPDPEHLAAVQNELWVLEQYGRALKDRGSAAL
>CP034587.1|AZQ71448.1|2272114_2273377_-|NAD(P)/FAD-dependent-oxidoreductase
MVDANQTFVIVGGGLAGAKAAETLRQEGFTGRVILICDEREHPYERPPLSKGYLTGRDARDSVFVHKPDWYAKADVELHLGQPAVHLDRAAKTVRLGDGTLVHYDKLLLATGAEPRRLDIPGTGLAGVHHLRRLAHAERLRGVLSSLGRDNGHLVIAGAGWIGLEVAAAARGYGAEVTVVEPEPTPLHTVLGPELGQLFTDLHAEHGVRFHFGARLAEIAGHDGMVLAARTDDGEEHPAHDVLAAIGAAPRTALAEAAGLALVDRADGGGIAVDASLRTSDPDIYAAGDVAAAEHPWLGTRLRVEHWANALNEGPAAARAMLGQEVSYDRVPYFFSDQYDVGMEYSGYAPPGSYDQVVCRGDVGKREFIAFWLAEGRVLAGMNVNVWDVTEDIQKLIRAGARPDPDALADPSVPLRSFVP
>CP034587.1|AZQ71449.1|2273566_2274901_-|deoxyguanosinetriphosphate-triphosphohydrolase
MNGSAAGPVTEQDGIAGYDPADLERWAPEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVTPGTSARAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVEVACLAHDLGHPPFGHNGEQALNEVAGPCGGFEGNAQSLRLLTRLEPKRFVTVPTTGELVSVGLNLTRAALDAATKYPWPQGGHPTDPASPKFGVYTDDTPVFTWLRQGAPGHRRSFEAQVMDWADDVAYSVHDVEDGLHAGHLDPHVLHAESERREIFAVAAGRYAPGAAPDELSDALDRLLEQEWWPHGYDGSAVSQARLKDATSQLIGRFCLAAEEATRAAHGPGRLTRYRAELVVPRGTRLECAVLKAVADRYVMQREDQEKLRAEQRVVIAELAEALVARAPDGLDPQFHSLWTEAKDDAGRLRAVVDQIAALTDSSARSLHARLVGGAGAGRAGS
>CP034587.1|AZQ71450.1|2275022_2275727_+|hypothetical-protein
MGVTSGTRLRGTRLRLPTTVAGRRRAVRGVMAACVLALLPVTWVHTAGTPRVRTARDVPEAPVAMVFGAGLWGGKPSPYLAHRLDTAAGLYRAGKVRVLLVTGDNSRDDYDEPDAMRAYLTKRGVPDDRIVSDFAGFDTWDSCARAKRVFGVDRAVLVSQDFHIRRAVALCGAAGIDAYGVGAGENHDVTWLAGGAREVLAAGKAALDAVVRPSPAFLGPHEPGVERALETAGR
>CP034587.1|AZQ71451.1|2275742_2276792_-|hypothetical-protein
MSRSWRPAAVATAVLLGLLIPAGTGTARAEDDAGKRVHARVVGTLEGESVAPAVNRHGDVAFTTKQGDQMVWNATTGERRTLQKVPDAAPSDLTDDGRVVGAHHTDGLILWAADGSVTRIGIPPGQVAVLYGSPRIGEDGTVLLTAYHLVRPDPRRPQPVYMSYRWTPGGGFQLLGAAGEGTTAMAVNDAGLIVGSSGNTAAAWHPDGSVETYAPTPGHTSRTWARGVSDRGVLVGGQQRPGSGGRATPTRWDGPAEPQELTDLGFGGEAAGVNSRGWITGTVHTSATDYRTVPVVWDPHGGPHRLDELLDVPEGGTLADVEAINDRDQLLVRMYTADRKPLDQVVQLH
>CP034587.1|AZQ75482.1|2276923_2277772_-|hypothetical-protein
MAAAVPRGAGGHGRGGNWSSEEARRFWGPTRTADTADSTDGAAASGARRVTGSARHFDGVPSVGVLFYAGEDMKDHHCTASVVHSPKGNLIVTAGHCGLGEGTSFVPDYQQGAGSQPYGVWTVDRVFTDPRRDDYGDGSDLDFAFATVRPDGRGRQIERVTGANRLIRTPGFTDLITVIGYPSADSDPADQAVRCAALTARLAGHNQMRMRCDGFSSGTSGSPWLVRFSEKTRTGDLVGVLGGLNGGGPDGEDADRVSYSPVNDDEIFRLYLDAINGREPRR
>CP034587.1|AZQ71452.1|2278004_2278922_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTGWSAKDIPDQNGRTAVVTGANSGIGYVTARELARRGARVVLACRDTTRGKAAEQLMRDQVPGADLRLATLDLADLSSVRAFVKELPEDRVDLLVNNAGVMALPHRRTVDGFEMQFGTNHLGHFALTGLLLPRLRAAGPGARVVTVSSGLHLFGTVDPRDVQMDHRYRRWIAYGRSKSANLLFTHELSRRLTAEGGSVLAVAAHPGYASTNLQTAGARMEGRAWMERGAELLNRLLAQSAEDGALPSLYAATAAGVRQDDFIGPRLQLWRGAPARSVRAWWTRDDRASAGLWAVSERLTGVTYP
>CP034587.1|AZQ75483.1|2278939_2279380_-|hypothetical-protein
MALGGALLLADVARGSVTWPRGGCWAVIGVTLVAVLWPPRVTAGANWLAVRGLLREHRVRTDLLTRVRRSDGMSPRLVLRDVAGNRVEFDPKVLAANPLLWHHLDTGARRARESGLLREGAMPLGALADRIDGEGARTLLRSAGLE

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Click the colored protein region to show detailed information

Crispr_ID: CP034587_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP034587_4

5298600-5298758

Orphan

Consensus_repeat	Method
CCGAGCGCGGCTAGCCCGTACGCGGTGATGGGGGCTCCGCTGCCGCTGCTGGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP034587_4

>merge|CP034587|4|5298600-5298758|CRISPRCasFinder
CCGAGCGCGGCTAGCCCGTACGCGGTGATGGGGGCTCCGCTGCCGCTGCTGGGGTAGCGACGGCCCGGCCGGGGGTCCGGGGGTTGCCCCCGGGAGGACACAGTCCGAGCGCGGCTAGCCCGTACGCGGTGATGGGGGCTCCGCTGCCGCTGCTGGGGT

>CP034587|4|4|5298600-5298758|CRISPRCasFinder
CCGAGCGCGGCTAGCCCGTACGCGGTGATGGGGGCTCCGCTGCCGCTGCTGGGGT	AGCGACGGCCCGGCCGGGGGTCCGGGGGTTGCCCCCGGGAGGACACAGT
CCGAGCGCGGCTAGCCCGTACGCGGTGATGGGGGCTCCGCTGCCGCTGCTGGGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP034587.1\|AZQ73838.1\|5306429_5306726_+\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
CP034587.1\|AZQ73837.1\|5303209_5306290_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
CP034587.1\|AZQ73836.1\|5302775_5303084_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
CP034587.1\|AZQ73825.1\|5285582_5287688_+\|ATP-binding-protein	unknown	unknown	unknown
CP034587.1\|AZQ75751.1\|5299780_5300221_-\|DUF4439-domain-containing-protein	unknown	unknown	gnl\|CDD\|373114
CP034587.1\|AZQ73828.1\|5291187_5293122_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850
CP034587.1\|AZQ73839.1\|5306780_5307248_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
CP034587.1\|AZQ73826.1\|5287816_5289418_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
CP034587.1\|AZQ75750.1\|5297241_5298087_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379120
CP034587.1\|AZQ73835.1\|5301572_5302565_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
CP034587.1\|AZQ73829.1\|5293197_5294472_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
CP034587.1\|AZQ73824.1\|5284039_5285392_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|235685
CP034587.1\|AZQ73830.1\|5294468_5295770_+\|RIP-metalloprotease	unknown	unknown	gnl\|CDD\|100084
CP034587.1\|AZQ73840.1\|5307247_5308150_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
CP034587.1\|AZQ73841.1\|5308399_5313346_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
CP034587.1\|AZQ73834.1\|5301030_5301570_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
CP034587.1\|AZQ73823.1\|5283091_5283922_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
CP034587.1\|AZQ73831.1\|5295930_5297088_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
CP034587.1\|AZQ73827.1\|5289574_5291020_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143465
CP034587.1\|AZQ73833.1\|5298771_5299710_-\|kinase	unknown	unknown	gnl\|CDD\|309685

Protein	Function_ID	Function_description	E-value
CP034587.1\|AZQ73838.1\|5306429_5306726_+\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	8.43592e-37
CP034587.1\|AZQ73837.1\|5303209_5306290_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
CP034587.1\|AZQ73836.1\|5302775_5303084_+\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	4.01011e-24
CP034587.1\|AZQ75751.1\|5299780_5300221_-\|DUF4439-domain-containing-protein	gnl\|CDD\|373114	pfam14530, DUF4439, Domain of unknown function (DUF4439). This domain has a ferritin-like fold.	3.95479e-22
CP034587.1\|AZQ73828.1\|5291187_5293122_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	6.91153e-96
CP034587.1\|AZQ73839.1\|5306780_5307248_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	7.12349e-49
CP034587.1\|AZQ73826.1\|5287816_5289418_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	4.72611e-32
CP034587.1\|AZQ75750.1\|5297241_5298087_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379120	pfam13312, DUF4081, Domain of unknown function (DUF4081). This domain is often found N-terminal to the GNAT acetyltransferase domain, pfam00583 and FR47, pfam08445.	8.53859e-51
CP034587.1\|AZQ73835.1\|5301572_5302565_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	0
CP034587.1\|AZQ73829.1\|5293197_5294472_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
CP034587.1\|AZQ73824.1\|5284039_5285392_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|235685	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase.	0
CP034587.1\|AZQ73830.1\|5294468_5295770_+\|RIP-metalloprotease	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	1.83815e-46
CP034587.1\|AZQ73840.1\|5307247_5308150_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.92894e-159
CP034587.1\|AZQ73841.1\|5308399_5313346_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	9.42842e-10
CP034587.1\|AZQ73834.1\|5301030_5301570_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	1.28175e-49
CP034587.1\|AZQ73823.1\|5283091_5283922_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	8.48148e-31
CP034587.1\|AZQ73831.1\|5295930_5297088_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
CP034587.1\|AZQ73827.1\|5289574_5291020_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
CP034587.1\|AZQ73833.1\|5298771_5299710_-\|kinase	gnl\|CDD\|309685	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase. The aminoglycoside phosphotransferases achieve inactivation of their antibiotic substrates by phosphorylation utilising ATP. Likewise hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.	4.66758e-44

>CP034587.1|AZQ75750.1|5297241_5298087_+|GNAT-family-N-acetyltransferase
MLTTTTTRVLEPGDLAAALAVLDRDPVANAFVAARVKVAGLDPWRLGGEMWGWYADGRLASLCYAGANLVPIGAGPEAVRAFADRARRSGRRCSSIVGPAPATTELWSLLEPHWGPAREVRSHQPLMVTRSMPAGITPDPLVRRVRKDEMETIMPACVAMFTEEVGVSPLAGDGGLLYQARVAELVGSGRSFARVENGRVVFKAEIGAATDLACQIQGVWVAPEHRGKGLSVTGMAAVLGYALREVAPVVSLYVNDYNTAARATYRRVGFEEVGAFMSVLF
>CP034587.1|AZQ73831.1|5295930_5297088_+|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MTAISLGMPSVPTKLADRRVSRKIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDDADALAVIAKKSQIPVIADIHFQPKYVFAAIDAGCAAVRVNPGNIKQFDDKVKEIAKAAGDAGTPIRIGVNAGSLDRRLLQKYGKATPEALVESALWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQCDYPLHLGVTEAGPAFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGIQILESLNLRQRRLEIVSCPSCGRAQVDVYKLAEEVTAGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPESKIVETLIEEAMKIAEQMEKDGVASGEPTISVAG
>CP034587.1|AZQ73830.1|5294468_5295770_+|RIP-metalloprotease
MTTLMTILGIVVFVVGLLFSIAWHELGHLSTAKMFGIRVPQYMVGFGPTLWSRKKGETEYGVKAIPLGGYIRMIGMFPPGEDGRISARSTSPWRGMIEDARSAAYEELQPGDETRMFYTRKPWKRVIVMFAGPFMNLVLAVAIFLGVMMSFGVNTQTTTVSAVSDCVVSASAATDKCPKGAKDSPAKAAGLQPKDRIVAFDGHRIGDWTTLQKEIRKTTGPATITVVRDGAEKTLSANLISNQVQKYDGKGAPVKGEYVTAGFLGFTPATGVVQQSFGQSVDRMGDMVQSGVESLVALPGKIPDLWNAAFDGGERKADSPMGVVGAARVGGEVFNLDIPPSQQIATMLFLVAGFNLSLFLFNMLPLLPLDGGHIAGALWESVRRNVAKVFRRPDPGPFDVAKLMPVAYVVAGIFVCFTLLVLIADVVNPVRLT
>CP034587.1|AZQ73829.1|5293197_5294472_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MTDCLADPHLRYSAPGRDHDGPREIVILGSTGSIGTQAIDLVLRNPERFTVSALSAAGGRVDLLAEQAHRLRVRTVAVARADKAAALREALAARYGTEPLPEILAGPDAATEVARGECHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLVKALAKPGQIIPVDSEHAALFQALLGGTRAEVRKLVVTASGGPFRGRTKAELAAVTPKDALAHPTWSMGPVITINSATLVNKGLEVIEAHLLYDIPFERIEVVVHPQSYVHSMVEFTDGSTLAQATPPDMRGPIAIGLGWPERVPDAAPAFDWSKASTWEFFPLDDEAFPSVGLARHVGTLGGTAPAVFNAANEECVDAFLSGHLPFNGIVDTVAEVVAEHGTPAVGTRLTLSDVLEAETWARARARELAARTGGRTAKATSEARA
>CP034587.1|AZQ73828.1|5291187_5293122_+|acyl-CoA-dehydrogenase
MTAPSVRPVSEREARQVAEAAREQDWKKPSFAKELFLGRFRLDLIHPHPTPAPDDVRRGEEFLGKLREFCETRIDGARIEREAKIPDETVSGLKELGAFGMKIDVKYGGLGLNHVYYNKALALVGSASPVVGALLSAHQSIGVPQPLKLFGTAEQKEKFLPRCARTDITAFLLTEPDVGSDPARLATSAVPDGDDYVLDGVKLWTTNGVVADLLVVMARVPKSEGHRGGITAFVVEAAAEGVTVENRNAFMGLRGIENGVTRFHQVRVPAANRIGPEGAGLKIALTTLNTGRLSIPAMCASSGKWALKIAREWSSAREQWGKPIAKHEAVGSKISFIAATTFALEAIVDLSGQMADEERNDIRIEAALAKLYASEMAWLMTDELVQIRGGRGYESADSLAARGERAVPAEQMLRDSRINRIFEGSTEIMHLLIAREAVDAHLSVAGDLIDPDKSLGDKARAGARAGGFYARWLPKLVAGPGALPRTYSEFHPTGHRDLSGHLRYVERSSRKLARSTFYAMSRWQGRMETKQGFLGRIVDIGAELFAMSAACVRAEHLRLRGEHGGEAYQLADAFCRQSRIRVEELFRRLWTNTDDLDRKVVSGVLAGSYEWLESGIVDPSGEGPWIADATPGPSKAENVHRPIR
>CP034587.1|AZQ73827.1|5289574_5291020_+|aldehyde-dehydrogenase-family-protein
MTAPIAFWLAGREATGEETFDVTNSWDGRLVGTVSVPTEAQVEEAVAAAHAVREEFAATPAHVRTAALDHVAKRLTERTEEIAQLISAENGKPIKWARGEVGRAVSVFRWAAEEARRFNAGEAQRLDTDAGGTGRLALTRRVPRGTVLGIAPFNFPLNLSAHKVAPAIAVGAPIILKPAPATPISSLVLGEILAETDLPAGSWSVLPVPNDRMPALVKDERLPVISFTGSGPVGWSILDSVPRKHVTLELGGNGAAVVLADWSSEADLDWAAQRVATFSNYQGGQSCISVQRVIADASLYERLLPKVVAAVEAQVTGDPSDASTDVGPLVSEDAAKRVESWVDEAVAAGATLLTGGKRDGATYAPTVLADVPAGVTIACEEVFGPVLTISKAEGETAAFAAVNDSPYGLQAGVFTHDLQTAFRAHRALEVGGVVIGDVPSYRADQMPYGGAKQSGVGREGVRYAMDDYTYERVLVLTGLDL
>CP034587.1|AZQ73826.1|5287816_5289418_+|PucR-family-transcriptional-regulator
MPLTLASLVNHSALRLTVLAGADRLDTPVRWAHVSELADPVPWMDGGELLLITAMKIDAADGEEMRRYVRRLVRAGVVGLGFAVGVNYDEVPGALVEAAAEEGLPLLEVPRRTPFLAITKAVSAAVAADQYHAVTAGFEAQRELTRAALAPEGPAALLARLAAHLGGWAALYDASGAVVAAAPNWAARRAARLGPDVKRLRERPAPASVVLGPDAAGAEGGDRVELQSLGSGRRTRGVLAVGTDAPLGTAGRYAVNSAVALLTLTTERSRALQDAEARLGAAVLRMLLADEPGHARAVAGELYGALLDEPFRMLVAEAADTGPEGELGTLADTAETAASRAAEPVLVVPEGERVVVLARDGGAAVAACVAYARTVEARRGAAAERDGGAEPGVAVGLSAPAGPAAAGTAFHQAEQALSVARRRGRALVEHEEVATGSVVPLLADDAVRAFADGLLRALHEHDATGRGDLVASLRAWLARHGQWDAAAADLGVHRHTLRYRMRRVEEILGRSLDDPDVRMELWLALKATAGPSQ
>CP034587.1|AZQ73825.1|5285582_5287688_+|ATP-binding-protein
MRDTEETAGGGKETPVESAVPPRPDAEPRAGGSAGAPFLSWLRTPRPDAAPGVWTFGHRPRPPEEPDRIPGRQLVSSAVISLLCGWLLWSLLWNGYLGHYWIWPLFALTPDSWREEGMLAVWVVYGYYTLVGLVLLVVFGRLGRWPQVWRRWAVPALRRLWDDSGDAAPTAPAAPGEDPAEWPRLRASGAGAAADRLAAEARAGLMNDVDHARIGRAWEAARARPDRLAAFTDAVVKHGAAACAHPSGARDLPVRAAVHDLVTRQVRIGTATDDERNPYDHRGAGAALDPTLLGTSLLAVGPPGCGKSARLVRPVLESLCLQALAGRTAVVAVAAAGAGLAPDDAFDVVVRIGRPDSAYDLDLYGGTDDPDEAAAVLAEGLVGDLIAGLPGGDGRRAATALAQLLGPFRAAHGRFPAVPELRDLLDGSAAATGALRTALTARGQDALVRELDARERQAGRPGDPGPLLSDRLALLDRPAFAGFFDTTRSGRAFSLRTLEHPLRVRIDLPERGHAEASRMLARLILAQFTECAAGRADRSLFACLVLDDATHTVTPESVRGLARLRSAHAGAVLTLRTLDDVPEALRSALLGSVGCRMAFSGVTTWDGARFAEVWGKEWVETRDVTDRQVIAHEPLTRVTHVVRRVITGRAVTAQSVTVRKVERERWSASELAHGVPAGHAVLSVTSVRGGSTPPVLVDLER
>CP034587.1|AZQ73824.1|5284039_5285392_-|4-aminobutyrate--2-oxoglutarate-transaminase
MTELSGGAALPQERRVVTAIPGPKSLELQARRLDAVAGGVGSVLPVFTTRAGGGVIEDVDGNRLIDFGSGIAVTSVGASAEAVVRRAAAQLADFTHTCFMVTPYEGYVEVCEQLAELTPGDHAKKSALFNSGAEAVENAVKIARAYTKRQAVVVFDHGYHGRTNLTMALTAKNMPYKHGFGPFAPEVYRVPVAYGYRWPTGPENCGPEAAAQAIDQITKQIGAENVAAIIIEPVLGEGGFIEPAKGFLPAIVKFANDNGIVFVADEIQSGFCRTGQWFACEDEGIVPDLITTAKGIAGGLPLAAVTGRAEIMDAPHAGGLGGTYGGNPVACAGALGAIETMREQDLNGKAKRIEEVMKGRLTAMQEKFPVIGDIRGRGAMIAIELVKDPATKEPNPAAAGALAKACHAEGLLVLTCGTYGNVLRFLPPLVIGEDLLNEGLDIIEGAFAGL
>CP034587.1|AZQ73823.1|5283091_5283922_-|phosphatase-PAP2-family-protein
MSETPRSQETADDAVPSLPQRRPGRAFAHSTGALGSGHPHRSDGRPPHTPRGARSTGRTGGPGTSPPVPGPSAYALPLACVLLFALVTWQVAAHGPLRVLDERLGRAVVGADAVPSGLAELLADLGNTVVAVPVLLAAVVFSVVRRRQWRPPVAAALAMVAVPLLVVPLKWWIGRAGPPAMGAGPHDGFFPSGHAATAAVAYGAAALLLFRTWWWVAPYALLNVGVGVGLVRQGYHWPLDVVGAWCLAGVVLWVQAGGRVVPTRPALRDDCPQHAP
>CP034587.1|AZQ73833.1|5298771_5299710_-|kinase
MAITNDRLEPPQRLVRTLSADPAADETARRWLTDLPDIAQEWLTRWELTPERVQCPGGRTSMVVLVRQADGTPAALKLSPPGGTTAAEHAALAHWDGRSAVRPLRVDAEGGALLLERLHADVSLRSLAEQKAQLEAAATLQRLWVAPPAEGHPLPSVTEHSAALAGELRAWRELPWAADARELLDEAVGLRDGLTADAPAEPPVLLHGEYHQGNVLAADRVPWLAIAPRPLVGERAYDLAWLVRDRLDTLLAAPGAAAAARRRVTKLADSLEVDAERLRGWTVFRATAAGMRELSLGARGQGELLLEFADLL
>CP034587.1|AZQ75751.1|5299780_5300221_-|DUF4439-domain-containing-protein
MPRAGRARQETVAAAQAALAAEHAAVYGYGIVGGRVDDTRAGEAREAHDAHRARRDAMSRAVRALGAEPEAAAAAYALPFPVTEGEAAVRLAAELERRLTAVYADLVRAATGSLRAEAAAGLREAAVRAVRWSGGSVAFPGLADRV
>CP034587.1|AZQ73834.1|5301030_5301570_+|ribosome-maturation-factor-RimP
MSTTQSERLRELLAPLVSARELELEEVEVTPAGKRRVLRIVVDSDEGVQLDACADLSRDISAKLDETDVMGGAPYVLEVTSPGADRPLTQARHYVRATGRLIKAQLVEGGELVARIVAVDDEGLDLEVPGVKGRKPTARRLTFAEIAKARVEIEFNRKSAAGDDAAAEADESDEIQEEA
>CP034587.1|AZQ73835.1|5301572_5302565_+|transcription-termination/antitermination-protein-NusA
MDIDMSALRGLVREKEISFDLLVEAIESALLIAYHRTEGSRRRARVELDRSTGHVTVWAKEDPQDLAEGEEPREFDDTPSGFGRIAATTAKQVILQRLRDAEDEITFGEFAGREGDVVAGVVQQGKDPKNVLVDIGKLEAILPVQEQVPGEEYKHGTRLRTYVVRVAKGVRGPSVTLSRTHPNLVKKLFAMEVPEIADGSVEIAAIAREAGHRTKIAVRSTRSGLNAKGACIGPMGGRVRAVMAELHGEKIDIVDWSDDPAELVAHALSPARVSKVEVVDFAARSARVTVPDYQLSLAIGKEGQNARLAARLTGWRIDIRPDTEQPSERD
>CP034587.1|AZQ73836.1|5302775_5303084_+|YlxR-family-protein
MSGRTHARACPERTCVGCRERAAKGELLRIVMIEGSCVPDPRGTLPGRGASVHPTLVCLDLAVRRRAFPRAFKVPGPLDTVELRRYVEQTDQQEIDPAVTRG
>CP034587.1|AZQ73837.1|5303209_5306290_+|translation-initiation-factor-IF-2
MAKVRVYELAKEFGVESKVVMAKLQELGEFVRSASSTIEAPVVRKLTDALQGPGGSAGKSAAKPAAPRKAAPAKPAAPTPGAQAPRPAAPAPKPAAAPKPAPATPAAGPAPTPGPRPGPKPAPAAPAKPVTPVPAAEFSAPAPAAPSERSERPAAPRPGAPGPRPGARPGGPAGQREGGRPERAPRPQGGPGERAPRPGGARPAGPRPGNNPFTSGGSTGMARPQAPRPGGAPRPGAGGPGAPRPQGGPGGAPRPQGGAPRPTPGGMPRPQGAPGGAPRPGGAPAGNRPNPGMMPQRPAAGPRPGPGGGGRGPGGGAGRPGGGAGRPGFAGRPAGPGGGGRPGGGGGFAGRPGGGGPGGGGGGFAGRPGGGGFGGRPGGPGARGGTQGAFGRPGGPARRGRKSKRQRRQEYEAMQAPSVGGVMLPRGNGDTIRLSRGASLTDFAEKIGANPASLVAVMMNLGEMVTATQSVSDETLQLLGGEMNYTVQIVSPEEEDRELLESFDIEFGENEGGEEMLVARPPVVTVMGHVDHGKTRLLDAIRKTNVVAGEAGGITQHIGAYQVATEVNDEERKITFIDTPGHEAFTAMRARGAKSTDIAILVVAANDGVMPQTIEALNHAKAADVPIVVAVNKIDVEGADPTKVRGQLTEFGLVAEEYGGDTMFVDISAKQGLNIDKLLEAVVLTADAALDLRANAEQDAQGIAIEAHLDRGRGAVATVLVQRGTLRVGDTMVAGDAYGRVRAMLDDKGQNVEEAGPSTPVLVLGLTNVPGAGDNFLVVDEDRTARQIAEKRAARERNAAFAKRTRRVSLEDLDKVLKAGLVQDLNIIIKGDASGSVEALESSLLQLDVGEEVEIRVLHRGVGAVTESDINLATGSDAIVIGFNVRAEGRATQMAEREGVDVRYYSVIYQAIEEIEAALKGMLKPEYEEVELGTAEIREIFRSSKLGNIAGVLIRSGEVKRNTKARLIRDGKVIAEELNIVGLRRFKDDVTEIREGFEGGINLGNFNDIKVDDVIATYEMREKPRG
>CP034587.1|AZQ73838.1|5306429_5306726_+|DUF503-domain-containing-protein
MYVGTLSFDILLGDVRSLKEKRSVVRPIVAELHRKYAVSVAEVGDQDLHRRATIGVAAVSGDPGHLTDLLDRCERMVAARPEVELLSVRRRFHGEHDD
>CP034587.1|AZQ73839.1|5306780_5307248_+|30S-ribosome-binding-factor-RbfA
MADNARAKRLADLIREVIAQKLQRGIKDPRLGSHVTITDTRVTGDLREATVFYTVYGDDEERAGVAAGLESAKGILRSEVGRAAGTKFTPTLTFVADALPDTARTIEDLLDKARASDAQVRQASSGATYAGDADPYRKPDEEEGDEKGDEKGAGA
>CP034587.1|AZQ73840.1|5307247_5308150_+|tRNA-pseudouridine(55)-synthase-TruB
MKEKYSGPDGLIIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGIERATKLLGHLALTEKEYVATIRLGQNTVTDDAEGEITSTTDASGVTREAVDAGIAKLTGAIMQVPSKVSAIKIDGVRSYKRAREGEDFEIPARPVTVSSFTLHAVIPAQAEDGTPVQDLLVSVVCSSGTYVRALARDLGADTGVGGHLTALRRTRVGPYGIGDARTLEALQEELTVMPVAEAASAAFQRWDVNEEQAKLLANGVRIKVPLFDTTGPIAVFGPDGRFLVLVENQGGRAKSLAVFA
>CP034587.1|AZQ73841.1|5308399_5313346_+|hypothetical-protein
MNGRRTDAEDSLVRIRDLAGRERGTGFLADDRGTLITSHEAVDGLARLVLHASGDLTCVVGAENVTPLPEYDLALVRTEGLCVPPLPVAAAVSFEGGNDVRLRAGRWHDARIIGDVPVTYTATDRFHLLGAALELSLSGRAGLRLGEEATGGPVFDARTGAVVAVLGTALQADRRAAGFAIPLRAAAASCPGGALAELLDRNSATVPAFGPDLNLAGALQLTATALGSVVTPRVWRDPVERPETEREFARFLDGEPGAESHALVLGLVGDPGTGRTTELGALAGRRARGAQPAPTLWLRGADLRVGDESVRDAIARALKAAGRIVTASAGPAGTIGDTAAATPEAVADLARRVGHPLLVLLDGPEEMPPVLAHALPAWTTATVRWLEETSSRLIVACRPEHWETAGALFPSGVLHRPGGGPCALPPPSGPRALPPCSRLPGLTPAQAAEVRASYGIPPGAVDPADAAHPLALRLLAEVRAALPDGTVGAGGTGEAAPDRWGVFSAYLDLICLRIAVRLAASRRPPLRGPAVRRLAARVAGQVHEAARRCLGPGQGELEREAFEELFPWRTGWASAVLTEGLLVPAGSGYRFAHEEFADWVQGSHLDLDAALYALVHRWYEPAGPPAEAAVRLPSRTGGKGPLPTPGGHVPPPPGSGAARGGAKGRRKRGGGPAEPPRPLPVPRHRIGPVLQAMLLLARRSGPTELSRRLSALVHAIETLSQRAAEAEAKEEGAGRRLGDPAWWAAHLLGETLLRVPDATPYLGVLRLLAERVTARSLAVGGFDSEAGRTLGGLAEFGPWFWLRLPLGLADRLELLRVLIPADGPPPGATQEAAALSASPSAEGLAAGSADGPTDGSADESVDGAVDGAARATVPAQSRGGAERAHASRGGGRGAAGAGRAGHAGARASGSAAGDVAPGSGAHRKGANGAHGAGGTGGVRRVPGQGGPAASAGAASQGVGASDDGTRGGTDAVRAAEEAGAPRGTGVSSRSGGRGGGPAAACAGAAWHAAGSGGGEPEASDWADGRGDRASGGARARGGAAQGAGGAARAPWGGRAGRVPGQGRGAGEARNGNERPPVLGRRRKAVPEDERVISYTSARPESVEPHEPYEPHEPHEPGVPYSEGWSEAWARTRSADAQEPGGPGGPGGPGEPVETAEMVETAEPVVPEARTEPEEPVRQGGGAGTAPPARRRASGGDAHAALADRFLTAVVTLFTADPCAAQPLLCRWFADERPLQITPAGARVRLTVATAAQALLHTHRRRAVDDLTEALVEAAHPRADELLAALAEDEPSALCRAVDRWAHDDRVERHVAAAAYALRTAPHVVTSADRQLLRYAALALLERPDEGTLHGTALALLVRDPDTRAKHLPQALAAFATGDPDLPPDLLAPALDTHPDQVLDVFRARLYEPGERPAAVLRTLAGISAPATLARRITTLVREHVDHRPEGAANAAEFVDRRLECGPATRSVLFPLVVDLLRTGTPQVRRALAPVLADPGTAVSRPLRQELLEVLMEREEYGPYERDATVLDTLLRAVAAGAAERTEARTRDLVHRTGLLMARTPEGAACFDRRLTQLAREIPVFGGQVRGWLKSAPAQWAVVVGPSARIRLTAGREKGGGGGQGGASDPTHPADVTGTAPADAGRRQPAWHS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

700687 : 707787

Streptomyces_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ70276.1\|700687_701158_-	hypothetical protein	A0A193GYZ0	Escherichia_phage	1.1e-15	36.4
AZQ70277.1\|701127_702984_-	DNA polymerase	K4HYK3	Streptomyces_virus	2.3e-218	61.6
AZQ75344.1\|702995_705242_-	toprim domain-containing protein	A0A2H5BLM3	Streptomyces_phage	4.9e-263	62.5
AZQ70278.1\|705396_705747_-	hypothetical protein	A0A2H5BLK6	Streptomyces_phage	3.8e-21	48.7
AZQ70279.1\|705755_706025_-	hypothetical protein	NA	NA	NA	NA
AZQ70280.1\|706109_706799_-	hypothetical protein	A0A2H5BLF0	Streptomyces_phage	4.0e-75	61.4
AZQ70281.1\|706989_707787_-	hypothetical protein	A0A2H5BLE4	Streptomyces_phage	4.1e-87	61.5

DBSCAN-SWA_2

1105526 : 1113194

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ70577.1\|1105526_1106498_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.7e-69	40.8
AZQ75378.1\|1106599_1107487_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	4.8e-89	54.2
AZQ70578.1\|1107623_1108220_-	dTDP-4-keto-6-deoxy-D-glucose epimerase	H9NC63	Sphingomonas_phage	5.8e-14	31.0
AZQ70579.1\|1108278_1109061_-	macrocin O-methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	6.9e-47	43.1
AZQ70580.1\|1109420_1110632_+	cytochrome P450	NA	NA	NA	NA
AZQ70581.1\|1110701_1110953_+	ferredoxin	NA	NA	NA	NA
AZQ70582.1\|1110949_1111957_+	NAD(P)-dependent oxidoreductase	A0A1D8KNX5	Synechococcus_phage	7.8e-27	28.3
AZQ70583.1\|1111973_1113194_+	class I SAM-dependent methyltransferase	A0A0B4ZZS0	Mycobacterium_phage	1.2e-13	31.1

DBSCAN-SWA_3

3203332 : 3217303

Streptomyces_phage(80.0%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ72176.1\|3203332_3204415_+\|tail	phage tail protein	Q8SBP1	Clostridium_phage	5.5e-10	50.0
AZQ72177.1\|3204457_3205636_+	tape-measure protein	NA	NA	NA	NA
AZQ72178.1\|3205807_3206743_+\|tail	phage tail protein	A0A2H5BLD4	Streptomyces_phage	3.1e-62	36.8
AZQ72179.1\|3206810_3207923_+	hypothetical protein	A0A1J0MC30	Streptomyces_phage	7.2e-58	55.5
AZQ72180.1\|3207919_3209029_+	hypothetical protein	A0A1J0MCX4	Streptomyces_phage	7.6e-116	54.6
AZQ72181.1\|3209028_3209736_+	hypothetical protein	A0A1J0MBW3	Streptomyces_phage	5.6e-40	40.6
AZQ72182.1\|3209810_3211394_+\|tail	phage tail protein	A0A1J0MCV7	Streptomyces_phage	4.2e-27	26.9
AZQ72183.1\|3211429_3211660_+	hypothetical protein	NA	NA	NA	NA
AZQ72184.1\|3211729_3212782_+	LysM peptidoglycan-binding domain-containing protein	A0A2P1N078	Streptomyces_phage	6.3e-88	47.4
AZQ72185.1\|3212823_3213054_+	hypothetical protein	A0A142K647	Streptomyces_phage	1.4e-19	73.3
AZQ72186.1\|3213050_3213314_+	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	1.0e-26	81.5
AZQ72187.1\|3213403_3217303_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	4.0e-55	26.8

DBSCAN-SWA_4

4151556 : 4159595

Bacillus_phage(66.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ75644.1\|4151556_4153242_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.5e-41	26.6
AZQ72918.1\|4153219_4153408_-	hypothetical protein	NA	NA	NA	NA
AZQ72919.1\|4153418_4155317_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-54	31.1
AZQ72920.1\|4155823_4156642_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-17	34.9
AZQ72921.1\|4156666_4157689_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	1.7e-21	28.2
AZQ72922.1\|4157804_4158785_+\|protease	trypsin-like serine protease	W5SAB9	Pithovirus	4.8e-05	29.4
AZQ72923.1\|4158857_4159595_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-37	38.3

DBSCAN-SWA_5

6004026 : 6052869

Indivirus(33.33%)

transposase,integrase

attL 6021501:6021518|attR 6032338:6032355

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ74335.1\|6004026_6005268_-\|integrase	site-specific integrase	NA	NA	NA	NA
AZQ74336.1\|6005267_6005531_-	DNA-binding protein	NA	NA	NA	NA
AZQ75817.1\|6007037_6008678_+\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
AZQ74337.1\|6009013_6009505_-	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	4.3e-39	50.6
AZQ74338.1\|6010444_6011059_+	hypothetical protein	NA	NA	NA	NA
AZQ75818.1\|6011146_6011758_+	DUF2236 domain-containing protein	NA	NA	NA	NA
AZQ74339.1\|6012256_6012583_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AZQ74340.1\|6014300_6015182_+	transporter	NA	NA	NA	NA
AZQ75819.1\|6015226_6015934_-	hypothetical protein	NA	NA	NA	NA
AZQ74341.1\|6016558_6016753_-	hypothetical protein	NA	NA	NA	NA
AZQ74342.1\|6016749_6017067_-	hypothetical protein	NA	NA	NA	NA
AZQ74343.1\|6017165_6017960_-	hypothetical protein	NA	NA	NA	NA
AZQ74344.1\|6018128_6018548_+	NUDIX hydrolase	NA	NA	NA	NA
AZQ74345.1\|6019753_6019936_-	hypothetical protein	NA	NA	NA	NA
AZQ74346.1\|6020205_6021597_+	XRE family transcriptional regulator	NA	NA	NA	NA
6021501:6021518	attL	NA	NA	NA	NA
AZQ74347.1\|6021593_6022481_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
AZQ74348.1\|6023270_6023984_+	hypothetical protein	NA	NA	NA	NA
AZQ74349.1\|6024257_6025853_-	hypothetical protein	NA	NA	NA	NA
AZQ74350.1\|6025857_6026190_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ74351.1\|6026186_6027266_-\|integrase	site-specific integrase	A0A1P8DJP1	Virus_Rctr41k	5.1e-08	32.4
AZQ74352.1\|6027411_6027858_-	hypothetical protein	NA	NA	NA	NA
AZQ74353.1\|6028224_6028929_-\|integrase	site-specific integrase	NA	NA	NA	NA
AZQ74354.1\|6029397_6030792_-	hypothetical protein	NA	NA	NA	NA
AZQ74355.1\|6030812_6034469_-	hypothetical protein	NA	NA	NA	NA
6032338:6032355	attR	NA	NA	NA	NA
AZQ74356.1\|6034488_6036744_-	hypothetical protein	NA	NA	NA	NA
AZQ74357.1\|6036748_6041083_-	hypothetical protein	NA	NA	NA	NA
AZQ74358.1\|6041104_6042361_-	hypothetical protein	NA	NA	NA	NA
AZQ74359.1\|6042735_6043377_-	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ74360.1\|6044134_6044365_+	acyl carrier protein	NA	NA	NA	NA
AZQ74361.1\|6045243_6045897_-	flavin reductase family protein	NA	NA	NA	NA
AZQ74362.1\|6045965_6046688_+	transcriptional regulator	NA	NA	NA	NA
AZQ74363.1\|6046824_6048105_+\|transposase	IS701 family transposase	NA	NA	NA	NA
AZQ74364.1\|6048195_6048714_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZQ74365.1\|6048710_6049376_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZQ74366.1\|6049409_6050870_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	2.3e-51	34.5
AZQ74367.1\|6050911_6051502_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AZQ74368.1\|6051579_6052869_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

6760097 : 6831268

Bacillus_phage(33.33%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ74870.1\|6760097_6762155_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
AZQ74871.1\|6762294_6763398_-	type III polyketide synthase	NA	NA	NA	NA
AZQ74872.1\|6763863_6764778_+	oxygenase	NA	NA	NA	NA
AZQ74873.1\|6764844_6765612_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AZQ75884.1\|6765703_6766759_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AZQ74874.1\|6766858_6767962_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZQ74875.1\|6767971_6769804_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZQ75885.1\|6770154_6771282_+	hypothetical protein	NA	NA	NA	NA
AZQ74876.1\|6771328_6772555_+	protein-glutamate O-methyltransferase family protein	NA	NA	NA	NA
AZQ74877.1\|6772617_6773286_-	phosphatase PAP2 family protein	NA	NA	NA	NA
AZQ74878.1\|6773405_6773789_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA
AZQ74879.1\|6773785_6774742_+	M56 family peptidase	NA	NA	NA	NA
AZQ74880.1\|6774834_6775977_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
AZQ74881.1\|6776172_6776991_+	hypothetical protein	NA	NA	NA	NA
AZQ74882.1\|6777111_6778155_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
AZQ75886.1\|6778163_6778901_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZQ74883.1\|6778900_6780406_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AZQ75887.1\|6780423_6781527_+	cytochrome P450	NA	NA	NA	NA
AZQ74884.1\|6781523_6782441_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZQ74885.1\|6782595_6783165_+	hypothetical protein	NA	NA	NA	NA
AZQ74886.1\|6783198_6783447_-	DUF5133 domain-containing protein	NA	NA	NA	NA
AZQ74887.1\|6783543_6783990_-	nitroreductase family deazaflavin-dependent oxidoreductase	NA	NA	NA	NA
AZQ74888.1\|6784110_6786471_-	collagenase	NA	NA	NA	NA
AZQ74889.1\|6786820_6788005_+\|protease	M6 family metalloprotease domain-containing protein	NA	NA	NA	NA
AZQ74890.1\|6788149_6789136_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-17	29.6
AZQ74891.1\|6789132_6790152_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-14	31.1
AZQ74892.1\|6790151_6791138_-	ABC transporter permease	NA	NA	NA	NA
AZQ74893.1\|6791134_6792073_-	ABC transporter permease	NA	NA	NA	NA
AZQ74894.1\|6792088_6793837_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZQ74895.1\|6793968_6795342_+	aminopeptidase P family protein	NA	NA	NA	NA
AZQ74896.1\|6795392_6796541_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AZQ74897.1\|6796888_6797203_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
AZQ74898.1\|6797183_6798719_+	FAD-binding protein	NA	NA	NA	NA
AZQ74899.1\|6798738_6799647_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
AZQ74900.1\|6799657_6800662_+	proline racemase	NA	NA	NA	NA
AZQ74901.1\|6800658_6802041_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AZQ74902.1\|6802118_6802790_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZQ75888.1\|6802799_6804134_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
AZQ74903.1\|6804417_6804930_+	O-acetyl-ADP-ribose deacetylase	E2CTW8	Turbot_reddish_body_iridovirus	6.5e-30	44.1
AZQ74904.1\|6804996_6805215_-	hypothetical protein	NA	NA	NA	NA
AZQ75889.1\|6805265_6805733_-	transcriptional regulator	NA	NA	NA	NA
AZQ74905.1\|6805931_6806717_+	SDR family oxidoreductase	NA	NA	NA	NA
AZQ74906.1\|6806741_6807101_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
AZQ74907.1\|6807368_6807977_+	hemerythrin domain-containing protein	NA	NA	NA	NA
AZQ74908.1\|6808384_6808750_+	RNHCP domain-containing protein	NA	NA	NA	NA
AZQ74909.1\|6808777_6809194_+	RNHCP domain-containing protein	NA	NA	NA	NA
AZQ74910.1\|6809296_6809818_+	N-acetyltransferase	NA	NA	NA	NA
AZQ75890.1\|6812365_6812785_-	peptidoglycan-binding protein	NA	NA	NA	NA
AZQ74911.1\|6813246_6814457_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.7e-18	29.2
AZQ74912.1\|6814591_6815299_-	SMI1/KNR4 family protein	NA	NA	NA	NA
AZQ74913.1\|6815578_6816991_+	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	2.4e-34	27.6
AZQ74914.1\|6819053_6819641_-	N-acetyltransferase	NA	NA	NA	NA
AZQ74915.1\|6819821_6820712_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZQ74916.1\|6824244_6824583_+	hypothetical protein	A0A125RQ78	Bacillus_phage	1.8e-15	51.9
AZQ74917.1\|6825040_6825439_+	hypothetical protein	NA	NA	NA	NA
AZQ74918.1\|6825679_6827029_-	triacylglycerol lipase	NA	NA	NA	NA
AZQ74919.1\|6827572_6828199_-	hypothetical protein	NA	NA	NA	NA
AZQ74920.1\|6828162_6828684_-\|transposase	transposase	NA	NA	NA	NA
AZQ74921.1\|6829599_6830049_-	hypothetical protein	NA	NA	NA	NA
AZQ74922.1\|6830176_6831268_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

6974608 : 7039655

Kallithea_virus(20.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZQ75018.1\|6974608_6975415_+\|protease	serine protease	A0A1S5VFZ2	Kallithea_virus	8.5e-08	25.2
AZQ75019.1\|6978367_6979054_-	SMI1/KNR4 family protein	NA	NA	NA	NA
AZQ75020.1\|6979623_6980061_+	tautomerase family protein	NA	NA	NA	NA
AZQ75021.1\|6980045_6980921_-	hypothetical protein	NA	NA	NA	NA
AZQ75022.1\|6982810_6983188_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
AZQ75023.1\|6983571_6984138_-	TetR family transcriptional regulator	NA	NA	NA	NA
AZQ75905.1\|6984486_6984738_+	hypothetical protein	NA	NA	NA	NA
AZQ75024.1\|6985036_6986392_-	M23 family metallopeptidase	A0A2R3ZZL7	Microbacterium_phage	2.9e-08	44.2
AZQ75025.1\|6986447_6987782_-	hypothetical protein	NA	NA	NA	NA
AZQ75026.1\|6987850_6988390_+\|transposase	transposase	NA	NA	NA	NA
AZQ75027.1\|6988314_6988944_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AZQ75028.1\|6989464_6990823_-	M23 family metallopeptidase	NA	NA	NA	NA
AZQ75906.1\|6991191_6991788_+	hypothetical protein	NA	NA	NA	NA
AZQ75029.1\|6993077_6994220_-	type III polyketide synthase	NA	NA	NA	NA
AZQ75030.1\|6994463_6994967_+	hypothetical protein	NA	NA	NA	NA
AZQ75907.1\|6995104_6995524_+	hypothetical protein	NA	NA	NA	NA
AZQ75031.1\|6996522_6996870_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZQ75908.1\|6997456_6998527_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZQ75032.1\|6999372_7000794_+	MFS transporter	NA	NA	NA	NA
AZQ75033.1\|7000847_7001699_+	NmrA family transcriptional regulator	NA	NA	NA	NA
AZQ75034.1\|7001975_7002644_-	hypothetical protein	NA	NA	NA	NA
AZQ75035.1\|7003055_7004168_-	hypothetical protein	NA	NA	NA	NA
AZQ75909.1\|7004719_7005028_+	transcriptional regulator	NA	NA	NA	NA
AZQ75036.1\|7005046_7005406_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	2.5e-12	36.4
AZQ75037.1\|7005638_7006832_-	hypothetical protein	NA	NA	NA	NA
AZQ75038.1\|7008087_7009149_+	hypothetical protein	NA	NA	NA	NA
AZQ75039.1\|7009501_7010227_+	dienelactone hydrolase family protein	NA	NA	NA	NA
AZQ75040.1\|7011171_7012776_-	SDR family oxidoreductase	NA	NA	NA	NA
AZQ75041.1\|7013039_7013357_-	hypothetical protein	NA	NA	NA	NA
AZQ75042.1\|7013424_7013928_-	hypothetical protein	NA	NA	NA	NA
AZQ75910.1\|7015491_7016772_+\|transposase	IS701 family transposase	NA	NA	NA	NA
AZQ75043.1\|7017915_7018572_+	hypothetical protein	NA	NA	NA	NA
AZQ75044.1\|7018944_7020003_-	glycosyl transferase	NA	NA	NA	NA
AZQ75045.1\|7020052_7020706_-	CatB-related O-acetyltransferase	A0A1J0F9G1	Only_Syngen_Nebraska_virus	8.1e-09	33.5
AZQ75046.1\|7020820_7021447_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZQ75047.1\|7021693_7022611_-	hypothetical protein	NA	NA	NA	NA
AZQ75048.1\|7022841_7023234_+	hypothetical protein	NA	NA	NA	NA
AZQ75049.1\|7023460_7024720_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AZQ75050.1\|7024631_7024976_+	hypothetical protein	NA	NA	NA	NA
AZQ75051.1\|7024908_7026855_-	APC family permease	NA	NA	NA	NA
AZQ75052.1\|7027268_7028381_-	glycosyltransferase	NA	NA	NA	NA
AZQ75053.1\|7028470_7029550_-	hypothetical protein	NA	NA	NA	NA
AZQ75911.1\|7030014_7030398_+	hypothetical protein	NA	NA	NA	NA
AZQ75912.1\|7030527_7031379_-	oxidoreductase	NA	NA	NA	NA
AZQ75054.1\|7031614_7032514_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZQ75055.1\|7032740_7033013_-	hypothetical protein	NA	NA	NA	NA
AZQ75056.1\|7033096_7033594_-	hypothetical protein	NA	NA	NA	NA
AZQ75057.1\|7033703_7034306_-	DUF2867 domain-containing protein	NA	NA	NA	NA
AZQ75058.1\|7034319_7034607_-	hypothetical protein	NA	NA	NA	NA
AZQ75059.1\|7034709_7035273_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZQ75060.1\|7035531_7035957_+	transcriptional repressor	NA	NA	NA	NA
AZQ75061.1\|7036672_7037875_-	GTP-binding protein	NA	NA	NA	NA
AZQ75062.1\|7037880_7038051_-	50S ribosomal protein L32	NA	NA	NA	NA
AZQ75063.1\|7038764_7039655_-\|protease	serine protease	A0A2H4UX85	Drosophila_innubila_nudivirus	2.2e-09	29.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP034587

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection