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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018321 Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome 0 crisprs Cas9_archaeal 0 0 1 0
AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 4 crisprs RT,cas3,cas6,DEDDh 0 22 0 0
AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 3 crisprs Cas9_archaeal,cas1,RT,cas14j,Cas14c_CAS-V-F,c2c9_V-U4,cas6 0 7 3 0
AP018324 Nostoc sp. HK-01 plasmid plasmid6 DNA, complete genome 0 crisprs NA 0 0 0 0
AP018322 Nostoc sp. HK-01 plasmid plasmid4 DNA, complete genome 0 crisprs RT 0 0 0 0
AP018318 Nostoc sp. HK-01 DNA, complete genome 13 crisprs Cas14u_CAS-V,DEDDh,csa3,c2c5_V-U5,RT,PD-DExK,2OG_CAS,cas6,cas4,cas1,cas2,cas3,DinG,csx1 0 11 4 0
AP018323 Nostoc sp. HK-01 plasmid plasmid5 DNA, complete genome 0 crisprs NA 0 0 0 0
AP018325 Nostoc sp. HK-01 plasmid plasmid7 DNA, complete genome 1 crisprs NA 0 1 0 0

Results visualization

1. AP018321
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2196 : 54976 57 Escherichia_phage(18.18%) integrase,transposase attL 4402:4427|attR 36835:36860
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. AP018320
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018320_1 9345-9422 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018320_2 26643-26742 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018320_3 102249-103672 Unclear NA
19 spacers
cas6,DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018320_4 211033-211153 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018320_1 1.1|9369|30|AP018320|CRISPRCasFinder 9369-9398 30 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 9369-9398 0 1.0
AP018320_2 2.1|26667|52|AP018320|CRISPRCasFinder 26667-26718 52 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 26667-26718 0 1.0
AP018320_3 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT 102286-102323 38 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102286-102323 0 1.0
AP018320_3 3.2|102361|35|AP018320|PILER-CR,CRISPRCasFinder,CRT 102361-102395 35 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102361-102395 0 1.0
AP018320_3 3.3|102433|34|AP018320|PILER-CR,CRISPRCasFinder,CRT 102433-102466 34 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102433-102466 0 1.0
AP018320_3 3.4|102504|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 102504-102539 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102504-102539 0 1.0
AP018320_3 3.5|102577|37|AP018320|PILER-CR,CRISPRCasFinder,CRT 102577-102613 37 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102577-102613 0 1.0
AP018320_3 3.6|102651|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 102651-102686 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102651-102686 0 1.0
AP018320_3 3.7|102724|35|AP018320|PILER-CR,CRISPRCasFinder,CRT 102724-102758 35 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102724-102758 0 1.0
AP018320_3 3.8|102796|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 102796-102831 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102796-102831 0 1.0
AP018320_3 3.9|102869|35|AP018320|PILER-CR,CRISPRCasFinder,CRT 102869-102903 35 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102869-102903 0 1.0
AP018320_3 3.10|102941|37|AP018320|PILER-CR,CRISPRCasFinder,CRT 102941-102977 37 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 102941-102977 0 1.0
AP018320_3 3.11|103015|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 103015-103050 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103015-103050 0 1.0
AP018320_3 3.12|103088|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 103088-103123 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103088-103123 0 1.0
AP018320_3 3.13|103161|34|AP018320|PILER-CR,CRISPRCasFinder,CRT 103161-103194 34 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103161-103194 0 1.0
AP018320_3 3.14|103232|35|AP018320|PILER-CR,CRISPRCasFinder,CRT 103232-103266 35 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103232-103266 0 1.0
AP018320_3 3.15|103304|36|AP018320|PILER-CR,CRISPRCasFinder,CRT 103304-103339 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103304-103339 0 1.0
AP018320_3 3.16|103377|37|AP018320|PILER-CR,CRISPRCasFinder,CRT 103377-103413 37 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103377-103413 0 1.0
AP018320_3 3.17|103451|39|AP018320|CRISPRCasFinder,CRT 103451-103489 39 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103451-103489 0 1.0
AP018320_3 3.18|103527|36|AP018320|CRISPRCasFinder,CRT 103527-103562 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103527-103562 0 1.0
AP018320_3 3.19|103600|36|AP018320|CRISPRCasFinder,CRT 103600-103635 36 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 103600-103635 0 1.0
AP018320_4 4.1|211064|59|AP018320|CRISPRCasFinder 211064-211122 59 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 211064-211122 0 1.0
AP018320_1 1.1|9369|30|AP018320|CRISPRCasFinder 9369-9398 30 NZ_CP021745 Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence 64643-64672 7 0.767
AP018320_3 3.13|103161|34|AP018320|PILER-CR,CRISPRCasFinder,CRT 103161-103194 34 NZ_CP022118 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence 154047-154080 10 0.706
AP018320_3 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT 102286-102323 38 NZ_CP009368 Bacillus cereus strain FM1 plasmid unnamed, complete sequence 107040-107077 11 0.711
AP018320_3 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT 102286-102323 38 NZ_CP015592 Bacillus cereus strain AR156 plasmid pAR460, complete sequence 188978-189015 11 0.711

1. spacer 1.1|9369|30|AP018320|CRISPRCasFinder matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgccaatactcaccaaaagtactagataaa	CRISPR spacer
cgccaatactcaccaaaagtactagataaa	Protospacer
******************************

2. spacer 2.1|26667|52|AP018320|CRISPRCasFinder matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tttgtcaagaaaaattagtcacgttatggggattttacttccaagaacgtta	CRISPR spacer
tttgtcaagaaaaattagtcacgttatggggattttacttccaagaacgtta	Protospacer
****************************************************

3. spacer 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtctatggcctgtgcctgcaataatcatttcatcttcc	CRISPR spacer
gtctatggcctgtgcctgcaataatcatttcatcttcc	Protospacer
**************************************

4. spacer 3.2|102361|35|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccatctaacaaactagaccacatttcatcaaaaga	CRISPR spacer
ccatctaacaaactagaccacatttcatcaaaaga	Protospacer
***********************************

5. spacer 3.3|102433|34|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtatacatctacacgacactcgaccccatcatac	CRISPR spacer
gtatacatctacacgacactcgaccccatcatac	Protospacer
**********************************

6. spacer 3.4|102504|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

actattttttgcagccgagcgatcgcgctcatcatt	CRISPR spacer
actattttttgcagccgagcgatcgcgctcatcatt	Protospacer
************************************

7. spacer 3.5|102577|37|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cttgttctttggtaatggtttcggtgaaatctcccgt	CRISPR spacer
cttgttctttggtaatggtttcggtgaaatctcccgt	Protospacer
*************************************

8. spacer 3.6|102651|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

acttactaactcttttggtgtattccctgatgactt	CRISPR spacer
acttactaactcttttggtgtattccctgatgactt	Protospacer
************************************

9. spacer 3.7|102724|35|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aggacagatgtctagttacattcttggtaacccga	CRISPR spacer
aggacagatgtctagttacattcttggtaacccga	Protospacer
***********************************

10. spacer 3.8|102796|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atagcactaataaattttaaaatccaaagccgccaa	CRISPR spacer
atagcactaataaattttaaaatccaaagccgccaa	Protospacer
************************************

11. spacer 3.9|102869|35|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctggcgactcgacaccatagacggcgattttttct	CRISPR spacer
ctggcgactcgacaccatagacggcgattttttct	Protospacer
***********************************

12. spacer 3.10|102941|37|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgaggaacagcgcccacagacaaactacttgacaaga	CRISPR spacer
cgaggaacagcgcccacagacaaactacttgacaaga	Protospacer
*************************************

13. spacer 3.11|103015|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atgactttgtagtagggtggtacgaatatacgcgca	CRISPR spacer
atgactttgtagtagggtggtacgaatatacgcgca	Protospacer
************************************

14. spacer 3.12|103088|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

taccgaatccacccatccattatctaaaacactcgc	CRISPR spacer
taccgaatccacccatccattatctaaaacactcgc	Protospacer
************************************

15. spacer 3.13|103161|34|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

attgaaaaatgacaggaatagcagccggataaac	CRISPR spacer
attgaaaaatgacaggaatagcagccggataaac	Protospacer
**********************************

16. spacer 3.14|103232|35|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

acctgattcttcgtccttagattcttcggttctat	CRISPR spacer
acctgattcttcgtccttagattcttcggttctat	Protospacer
***********************************

17. spacer 3.15|103304|36|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aagccaggtttctagcgtgaagtccccggtaaaaac	CRISPR spacer
aagccaggtttctagcgtgaagtccccggtaaaaac	Protospacer
************************************

18. spacer 3.16|103377|37|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttgtgaatcatccgtcatggttgcgttcaatggcttt	CRISPR spacer
ttgtgaatcatccgtcatggttgcgttcaatggcttt	Protospacer
*************************************

19. spacer 3.17|103451|39|AP018320|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

taatcaatctgtctgtctcctttgatggcagacttcaga	CRISPR spacer
taatcaatctgtctgtctcctttgatggcagacttcaga	Protospacer
***************************************

20. spacer 3.18|103527|36|AP018320|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cttcctttggggtcgtttacatcggagatagggtcg	CRISPR spacer
cttcctttggggtcgtttacatcggagatagggtcg	Protospacer
************************************

21. spacer 3.19|103600|36|AP018320|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tttcgatagtaaagctataccctgcctgctgaattt	CRISPR spacer
tttcgatagtaaagctataccctgcctgctgaattt	Protospacer
************************************

22. spacer 4.1|211064|59|AP018320|CRISPRCasFinder matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tcctgttccattgtgttctattgttgttccatgtaaatctggtttttgtcctgtttcag	CRISPR spacer
tcctgttccattgtgttctattgttgttccatgtaaatctggtttttgtcctgtttcag	Protospacer
***********************************************************

23. spacer 1.1|9369|30|AP018320|CRISPRCasFinder matches to NZ_CP021745 (Agarilytica rhodophyticola strain 017 plasmid pSU1, complete sequence) position: , mismatch: 7, identity: 0.767

cgccaatactcaccaaaagtactagataaa	CRISPR spacer
acccaataatcaccaaaaggactagagagt	Protospacer
  ****** ********** ****** *. 

24. spacer 3.13|103161|34|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

attgaaaaatgacaggaatagcagccggataaac	CRISPR spacer
cctgaaaaatgacaggaataaccgcccaaaggaa	Protospacer
 .******************.* *** .* ..* 

25. spacer 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.711

gtctatggcctgtgcctgcaataatcatttcatcttcc	CRISPR spacer
gatctttaagtgtgcttgcaatattcatttcatcttct	Protospacer
* .. * .  *****.******* *************.

26. spacer 3.1|102286|38|AP018320|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.711

gtctatggcctgtgcctgcaataatcatttcatcttcc	CRISPR spacer
gatctttaagtgtgcttgcaatattcatttcatcttct	Protospacer
* .. * .  *****.******* *************.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. AP018318
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_3 924795-925195 TypeV-U5 V-U5
5 spacers
c2c5_V-U5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_4 1222484-1222731 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_5 1499973-1500069 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_11 2534312-2535233 Orphan I-D,II-B
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_13 3214788-3215259 Orphan I-D,II-B
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_14 3435556-3435656 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_17 4391468-4391801 Orphan I-D,II-B
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_18 4515175-4515274 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_19 4580504-4580613 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_20 4727622-4727803 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_21 5026118-5026351 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_22 5031057-5031154 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018318_23 5079700-5080678 Orphan I-D,II-B
13 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 199272-199297 3 0.885
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MT773556 Myoviridae sp. isolate BML_4 genomic sequence 186950-186975 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 NZ_CP015356 Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence 24257-24282 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 NC_022882 Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence 218875-218900 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 506412-506437 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MN693176 Marine virus AFVG_25M105, complete genome 11964-11989 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MH622943 Myoviridae sp. isolate ctbc_4, complete genome 16715-16740 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MT446416 UNVERIFIED: Escherichia virus TH47, complete genome 335482-335507 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 JQ660954 Clostridium phage PhiS63, complete genome 26264-26289 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MN693504 Marine virus AFVG_25M410, complete genome 47917-47942 5 0.808
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MN693581 Marine virus AFVG_25M104, complete genome 11953-11978 5 0.808
AP018318_21 21.2|5026216|28|AP018318|CRISPRCasFinder 5026216-5026243 28 NZ_CP010728 Phaeobacter inhibens strain P88 plasmid pP88_c, complete sequence 3401-3428 6 0.786
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 NZ_CP013043 Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence 49928-49953 6 0.769
AP018318_11 11.12|2535164|33|AP018318|CRISPRCasFinder,CRT 2535164-2535196 33 NZ_CP046295 Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence 88223-88255 7 0.788
AP018318_11 11.24|2535166|33|AP018318|PILER-CR 2535166-2535198 33 NZ_CP046295 Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence 88223-88255 7 0.788
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_CP013276 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence 152244-152275 7 0.781
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_CP039722 Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence 289582-289613 7 0.781
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_CP009349 Bacillus thuringiensis HD1002 plasmid 1, complete sequence 228316-228347 7 0.781
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_CP045023 Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence 152245-152276 7 0.781
AP018318_23 23.14|5080533|26|AP018318|CRT 5080533-5080558 26 MG945635 UNVERIFIED: Microviridae sp. isolate 6482-1602, complete genome 3570-3595 7 0.731
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP021940 Klebsiella pneumoniae strain AR_0145 plasmid tig00000209, complete sequence 29456-29484 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 CP044030 Klebsiella pneumoniae strain RJY9645 plasmid pY9645-105, complete sequence 90127-90155 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP019050 Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166c, complete sequence 56970-56998 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP008931 Klebsiella pneumoniae strain PMK1 plasmid pPMK1-B, complete sequence 95959-95987 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP028550 Klebsiella variicola strain WCHKP19 plasmid p2_020019, complete sequence 97636-97664 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_MF133442 Klebsiella pneumoniae strain 11219 plasmid p11219-CTXM, complete sequence 109650-109678 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP026134 Klebsiella pneumoniae strain F5 plasmid pF5_2, complete sequence 64407-64435 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP022128 Klebsiella pneumoniae strain DHQP1605752_NV plasmid p1605752FIB_2, complete sequence 19925-19953 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 CP052220 Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-3, complete sequence 35231-35259 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP040729 Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_5, complete sequence 5277-5305 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 CP052527 Klebsiella pneumoniae strain B16KP0177 plasmid pB16KP0177-3, complete sequence 98749-98777 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP024460 Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence 6750-6778 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP050365 Klebsiella pneumoniae strain 47733 plasmid p47733_IncFIB, complete sequence 48042-48070 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP030268 Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-IncFIB-110K, complete sequence 54742-54770 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP026146 Klebsiella pneumoniae strain F132 plasmid pF132_1, complete sequence 74482-74510 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP026150 Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence 58370-58398 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP045677 Klebsiella pneumoniae strain WSD411 plasmid pWSD411_4, complete sequence 114219-114247 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP026138 Klebsiella pneumoniae strain F77 plasmid pF77_2, complete sequence 33629-33657 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP026165 Klebsiella pneumoniae strain F81 plasmid pF81_1, complete sequence 18208-18236 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP014756 Klebsiella pneumoniae strain AATZP plasmid pKPN-04f, complete sequence 108801-108829 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP021945 Klebsiella pneumoniae strain AR_0152 plasmid tig00000194, complete sequence 95753-95781 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP028544 Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid p2_020143, complete sequence 95262-95290 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP034055 Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed2, complete sequence 98814-98842 8 0.724
AP018318_12 12.1|2917234|29|AP018318|CRISPRCasFinder 2917234-2917262 29 NZ_CP034047 Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed2, complete sequence 98826-98854 8 0.724
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 293050-293081 8 0.75
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 MN694511 Marine virus AFVG_250M1047, complete genome 10468-10499 8 0.75
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 144809-144840 8 0.75
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_CP010578 Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence 212590-212621 9 0.719
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 NZ_AP017969 Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence 33840-33871 9 0.719
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 GU949551 Clostridium phage phiCD6356, complete genome 23161-23192 9 0.719
AP018318_13 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT 3214825-3214856 32 MN693596 Marine virus AFVG_25M324, complete genome 19119-19150 9 0.719
AP018318_22 22.1|5031085|42|AP018318|CRISPRCasFinder 5031085-5031126 42 CP024913 Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence 36761-36802 9 0.786
AP018318_23 23.10|5080388|34|AP018318|PILER-CR,CRISPRCasFinder,CRT 5080388-5080421 34 KX349902 Bacillus phage Kida, complete genome 57831-57864 9 0.735
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 44527-44562 9 0.75
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 MF547662 Clostridioides phage LIBA6276, complete genome 88523-88558 9 0.75
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 MF547663 Clostridioides phage LIBA2945, complete genome 87063-87098 9 0.75
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 77438-77473 9 0.75
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 MN693152 Marine virus AFVG_25M11, complete genome 33017-33052 9 0.75
AP018318_23 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder 5080533-5080568 36 LN681537 Clostridium phage phiCD211, complete genome 86300-86335 9 0.75
AP018318_2 2.3|589956|41|AP018318|PILER-CR 589956-589996 41 MK448748 Streptococcus phage Javan389, complete genome 1346-1386 10 0.756
AP018318_11 11.12|2535164|33|AP018318|CRISPRCasFinder,CRT 2535164-2535196 33 NZ_AP017960 Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence 46922-46954 10 0.697
AP018318_11 11.24|2535166|33|AP018318|PILER-CR 2535166-2535198 33 NZ_AP017960 Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence 46922-46954 10 0.697
AP018318_13 13.6|3215188|35|AP018318|PILER-CR,CRISPRCasFinder,CRT 3215188-3215222 35 MN693521 Marine virus AFVG_25M508, complete genome 9216-9250 10 0.714
AP018318_22 22.1|5031085|42|AP018318|CRISPRCasFinder 5031085-5031126 42 CP024914 Cyanobacterium sp. HL-69 plasmid pCHL69-2, complete sequence 45882-45923 10 0.762

1. spacer 23.14|5080533|26|AP018318|CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 3, identity: 0.885

ggattagaaattttataaattttaga	CRISPR spacer
ggattataaattttataacttttagc	Protospacer
****** *********** ****** 

2. spacer 23.14|5080533|26|AP018318|CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
atacaagaaattttataaattttagt	Protospacer
. *. ******************** 

3. spacer 23.14|5080533|26|AP018318|CRT matches to NZ_CP015356 (Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
atgttagcaattttagaaattttaga	Protospacer
. .**** ******* **********

4. spacer 23.14|5080533|26|AP018318|CRT matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
atgttagcaattttagaaattttaga	Protospacer
. .**** ******* **********

5. spacer 23.14|5080533|26|AP018318|CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
tgattaggtattttataaattttacc	Protospacer
 ******. ***************  

6. spacer 23.14|5080533|26|AP018318|CRT matches to MN693176 (Marine virus AFVG_25M105, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
atttcagaaattttataaatttgaga	Protospacer
.  *.***************** ***

7. spacer 23.14|5080533|26|AP018318|CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
tttttagaaattgtatcaattttaga	Protospacer
   ********* *** *********

8. spacer 23.14|5080533|26|AP018318|CRT matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
agattagaaaatgtataaattttatt	Protospacer
.********* * ***********  

9. spacer 23.14|5080533|26|AP018318|CRT matches to JQ660954 (Clostridium phage PhiS63, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
tttttagaacttttaaaaattttaga	Protospacer
   ****** ***** **********

10. spacer 23.14|5080533|26|AP018318|CRT matches to MN693504 (Marine virus AFVG_25M410, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
tatttagaaattttaaaaatattaga	Protospacer
 . ************ **** *****

11. spacer 23.14|5080533|26|AP018318|CRT matches to MN693581 (Marine virus AFVG_25M104, complete genome) position: , mismatch: 5, identity: 0.808

ggattagaaattttataaattttaga	CRISPR spacer
ctttcagaaattttataaatttgaga	Protospacer
   *.***************** ***

12. spacer 21.2|5026216|28|AP018318|CRISPRCasFinder matches to NZ_CP010728 (Phaeobacter inhibens strain P88 plasmid pP88_c, complete sequence) position: , mismatch: 6, identity: 0.786

tagtatctgaggttcgtgaatgagtctt	CRISPR spacer
tagtatatgaggttcgttaatgaccccc	Protospacer
****** ********** ***** .*..

13. spacer 23.14|5080533|26|AP018318|CRT matches to NZ_CP013043 (Clostridium perfringens strain JP55 plasmid pJFP55H, complete sequence) position: , mismatch: 6, identity: 0.769

ggattagaaattttataaattttaga	CRISPR spacer
ttattagaaattttatacattttgtt	Protospacer
  *************** *****.  

14. spacer 11.12|2535164|33|AP018318|CRISPRCasFinder,CRT matches to NZ_CP046295 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

tatctcagctacttaaagaatcatttgattgag	CRISPR spacer
tatcttagctacttaaagaatgatatcaaagaa	Protospacer
*****.*************** ** * *  **.

15. spacer 11.24|2535166|33|AP018318|PILER-CR matches to NZ_CP046295 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

tatctcagctacttaaagaatcatttgattgag	CRISPR spacer
tatcttagctacttaaagaatgatatcaaagaa	Protospacer
*****.*************** ** * *  **.

16. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 7, identity: 0.781

agccgt-tcctaatatttttatatgaataatta	CRISPR spacer
-tccgtaccctaatatttttatataaattatat	Protospacer
  **** .****************.*** **  

17. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgt-tcctaatatttttatatgaataatta	CRISPR spacer
-tccgtaccctaatatttttatataaattatat	Protospacer
  **** .****************.*** **  

18. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgt-tcctaatatttttatatgaataatta	CRISPR spacer
-tccgtaccctaatatttttatataaattatat	Protospacer
  **** .****************.*** **  

19. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgt-tcctaatatttttatatgaataatta	CRISPR spacer
-tccgtaccctaatatttttatataaattatat	Protospacer
  **** .****************.*** **  

20. spacer 23.14|5080533|26|AP018318|CRT matches to MG945635 (UNVERIFIED: Microviridae sp. isolate 6482-1602, complete genome) position: , mismatch: 7, identity: 0.731

ggattagaaattttataaattttaga	CRISPR spacer
ttccgagaaattttataaattttaat	Protospacer
   . *******************. 

21. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP021940 (Klebsiella pneumoniae strain AR_0145 plasmid tig00000209, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

22. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to CP044030 (Klebsiella pneumoniae strain RJY9645 plasmid pY9645-105, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

23. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP019050 (Klebsiella pneumoniae subsp. pneumoniae strain RJA166 plasmid pRJA166c, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

24. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP008931 (Klebsiella pneumoniae strain PMK1 plasmid pPMK1-B, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

25. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP028550 (Klebsiella variicola strain WCHKP19 plasmid p2_020019, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

26. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_MF133442 (Klebsiella pneumoniae strain 11219 plasmid p11219-CTXM, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

27. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP026134 (Klebsiella pneumoniae strain F5 plasmid pF5_2, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

28. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP022128 (Klebsiella pneumoniae strain DHQP1605752_NV plasmid p1605752FIB_2, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

29. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to CP052220 (Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-3, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

30. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP040729 (Klebsiella pneumoniae strain KpvST147B_SE1_1_NDM plasmid pKpvST147B_5, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

31. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to CP052527 (Klebsiella pneumoniae strain B16KP0177 plasmid pB16KP0177-3, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

32. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP024460 (Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

33. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP050365 (Klebsiella pneumoniae strain 47733 plasmid p47733_IncFIB, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

34. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP030268 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-IncFIB-110K, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

35. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP026146 (Klebsiella pneumoniae strain F132 plasmid pF132_1, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

36. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP026150 (Klebsiella pneumoniae strain F138 plasmid pF138_1, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

37. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP045677 (Klebsiella pneumoniae strain WSD411 plasmid pWSD411_4, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

38. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP026138 (Klebsiella pneumoniae strain F77 plasmid pF77_2, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

39. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP026165 (Klebsiella pneumoniae strain F81 plasmid pF81_1, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

40. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP014756 (Klebsiella pneumoniae strain AATZP plasmid pKPN-04f, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

41. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP021945 (Klebsiella pneumoniae strain AR_0152 plasmid tig00000194, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

42. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP028544 (Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143 plasmid p2_020143, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cgcgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

43. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP034055 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

44. spacer 12.1|2917234|29|AP018318|CRISPRCasFinder matches to NZ_CP034047 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

atcgtctaggagctgatctgtctggagca	CRISPR spacer
cacgtctacgagctgctctgtctggtttt	Protospacer
  ****** ****** *********  . 

45. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

agccgttcctaatatttttatatgaataatta	CRISPR spacer
aaatagacctaattttttcatatgaataatta	Protospacer
*. ..  ****** ****.*************

46. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to MN694511 (Marine virus AFVG_250M1047, complete genome) position: , mismatch: 8, identity: 0.75

agccgttcctaatatttttatatgaataatta	CRISPR spacer
aatctgcactaatattattagatgaataatta	Protospacer
*..*  . ******** *** ***********

47. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 8, identity: 0.75

agccgttcctaatatttttatatgaataatta	CRISPR spacer
tcctttttttactatttttatattaataatta	Protospacer
  *. **..** *********** ********

48. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 9, identity: 0.719

agccgttcctaatatttttatatgaataatta	CRISPR spacer
atattaaactaatatttttatatgaattttta	Protospacer
*  .    *******************  ***

49. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 9, identity: 0.719

agccgttcctaatatttttatatgaataatta	CRISPR spacer
aacatctcctaatatttttttataaataacct	Protospacer
*.*  .************* ***.*****.. 

50. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 9, identity: 0.719

agccgttcctaatatttttatatgaataatta	CRISPR spacer
aaattattttaatatttttatataaattatta	Protospacer
*. .  *..**************.*** ****

51. spacer 13.1|3214825|32|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to MN693596 (Marine virus AFVG_25M324, complete genome) position: , mismatch: 9, identity: 0.719

agccgtt-----cctaatatttttatatgaataatta	CRISPR spacer
-----tttttgatctaatttttttatatcaataattg	Protospacer
     **     .***** ********* *******.

52. spacer 22.1|5031085|42|AP018318|CRISPRCasFinder matches to CP024913 (Cyanobacterium sp. HL-69 plasmid pCHL69-1, complete sequence) position: , mismatch: 9, identity: 0.786

ccctaaatcccccttaaaaagggggacttgaagaattttctt	CRISPR spacer
ccctaaatcccccttaataagggggacttgagaataataaat	Protospacer
***************** *************..*   *   *

53. spacer 23.10|5080388|34|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to KX349902 (Bacillus phage Kida, complete genome) position: , mismatch: 9, identity: 0.735

tgcaaaaacaaaaagactgtacagataaaaaatg	CRISPR spacer
agcaaaaacaaaaagactacacagataatcgtat	Protospacer
 *****************..********  .   

54. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
gccaaaaacattttataaattttagagatttaatta	Protospacer
*    *.* *****************.*** **** 

55. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
gccaaaaacattttataaattttagagatttaatta	Protospacer
*    *.* *****************.*** **** 

56. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
gccaaaaacattttataaattttagagatttaatta	Protospacer
*    *.* *****************.*** **** 

57. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
gccaaaaacattttataaattttagagatttaatta	Protospacer
*    *.* *****************.*** **** 

58. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to MN693152 (Marine virus AFVG_25M11, complete genome) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
tggataatgattttatagattttagaaattatattg	Protospacer
 *. **. .********.************* *** 

59. spacer 23.12|5080533|36|AP018318|PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 9, identity: 0.75

ggattagaaattttataaattttagaaattaaattt	CRISPR spacer
gccaaaaacattttataaattttagagatttaatta	Protospacer
*    *.* *****************.*** **** 

60. spacer 2.3|589956|41|AP018318|PILER-CR matches to MK448748 (Streptococcus phage Javan389, complete genome) position: , mismatch: 10, identity: 0.756

gggtgatttcagcgcaagcaaaactcgcccaagctcaagaa	CRISPR spacer
gtgttggacctacgcaagcacaactcgaccaagctcaagaa	Protospacer
* ** .  .* .******** ****** *************

61. spacer 11.12|2535164|33|AP018318|CRISPRCasFinder,CRT matches to NZ_AP017960 (Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

tatctcagctacttaaagaatcatttgattgag	CRISPR spacer
cgattagtgtacttaaagaatcaattgcttgag	Protospacer
.. .* .  ************** *** *****

62. spacer 11.24|2535166|33|AP018318|PILER-CR matches to NZ_AP017960 (Synechococcus sp. NIES-970 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

tatctcagctacttaaagaatcatttgattgag	CRISPR spacer
cgattagtgtacttaaagaatcaattgcttgag	Protospacer
.. .* .  ************** *** *****

63. spacer 13.6|3215188|35|AP018318|PILER-CR,CRISPRCasFinder,CRT matches to MN693521 (Marine virus AFVG_25M508, complete genome) position: , mismatch: 10, identity: 0.714

aggttgttcggggttttgagtttgatttgctccta	CRISPR spacer
aggttgttcgcggttctgagtttgatactgaattc	Protospacer
********** ****.********** .    .* 

64. spacer 22.1|5031085|42|AP018318|CRISPRCasFinder matches to CP024914 (Cyanobacterium sp. HL-69 plasmid pCHL69-2, complete sequence) position: , mismatch: 10, identity: 0.762

ccctaaatcccccttaaaaagggggacttgaagaattttctt	CRISPR spacer
ccctaaatctcccttaataagggggacttgagaataataaat	Protospacer
*********.******* *************..*   *   *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 142152 : 188371 40 Brazilian_cedratvirus(20.0%) transposase NA
DBSCAN-SWA_2 1598691 : 1657836 59 Agrobacterium_phage(14.29%) tRNA,protease,transposase NA
DBSCAN-SWA_3 2706463 : 2714402 8 Nostoc_phage(83.33%) tail NA
DBSCAN-SWA_4 4089945 : 4132335 47 Synechococcus_phage(33.33%) holin,protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. AP018319
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018319_1 62251-62573 Unclear I-D,II-B
4 spacers
cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018319_3 210450-210573 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018319_4 481847-481931 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018319_1 1.1|62288|34|AP018319|CRISPRCasFinder,CRT 62288-62321 34 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 62288-62321 0 1.0
AP018319_1 1.2|62359|33|AP018319|CRISPRCasFinder,CRT,PILER-CR 62359-62391 33 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 62359-62391 0 1.0
AP018319_1 1.3|62429|36|AP018319|CRISPRCasFinder,CRT,PILER-CR 62429-62464 36 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 62429-62464 0 1.0
AP018319_1 1.4|62502|35|AP018319|CRISPRCasFinder,CRT,PILER-CR 62502-62536 35 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 62502-62536 0 1.0
AP018319_2 2.1|196377|49|AP018319|CRISPRCasFinder 196377-196425 49 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 196377-196425 0 1.0
AP018319_3 3.1|210488|48|AP018319|CRISPRCasFinder 210488-210535 48 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 210488-210535 0 1.0
AP018319_4 4.1|481872|35|AP018319|CRISPRCasFinder 481872-481906 35 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 481872-481906 0 1.0

1. spacer 1.1|62288|34|AP018319|CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caaaaggcgatcagcctaaatttgggaattcatc	CRISPR spacer
caaaaggcgatcagcctaaatttgggaattcatc	Protospacer
**********************************

2. spacer 1.2|62359|33|AP018319|CRISPRCasFinder,CRT,PILER-CR matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctagcactagcacggcaaccaaaaatagttaat	CRISPR spacer
ctagcactagcacggcaaccaaaaatagttaat	Protospacer
*********************************

3. spacer 1.3|62429|36|AP018319|CRISPRCasFinder,CRT,PILER-CR matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ttaaaagatacgatttgggtaaatgtgggacatttg	CRISPR spacer
ttaaaagatacgatttgggtaaatgtgggacatttg	Protospacer
************************************

4. spacer 1.4|62502|35|AP018319|CRISPRCasFinder,CRT,PILER-CR matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gttggcggctgtgccttgattgggaatcaaaaatt	CRISPR spacer
gttggcggctgtgccttgattgggaatcaaaaatt	Protospacer
***********************************

5. spacer 2.1|196377|49|AP018319|CRISPRCasFinder matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caacatcagggctaatatcttctttgacctgcggctgtggttgtttact	CRISPR spacer
caacatcagggctaatatcttctttgacctgcggctgtggttgtttact	Protospacer
*************************************************

6. spacer 3.1|210488|48|AP018319|CRISPRCasFinder matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ataaccgggtttttatcgggtaaaaaattgcataacagtaaaaaagtg	CRISPR spacer
ataaccgggtttttatcgggtaaaaaattgcataacagtaaaaaagtg	Protospacer
************************************************

7. spacer 4.1|481872|35|AP018319|CRISPRCasFinder matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

agcacccatttagcccctatcaggcaattttaatt	CRISPR spacer
agcacccatttagcccctatcaggcaattttaatt	Protospacer
***********************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18673 : 58982 39 Wolbachia_phage(33.33%) transposase,holin NA
DBSCAN-SWA_2 184581 : 303913 105 Vibrio_phage(16.67%) transposase,integrase attL 241176:241193|attR 304255:304271
DBSCAN-SWA_3 319267 : 364285 56 Bacteriophage(23.08%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. AP018325
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018325_1 17805-17908 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018325_1 1.1|17844|26|AP018325|CRISPRCasFinder 17844-17869 26 AP018325 Nostoc sp. HK-01 plasmid plasmid7 DNA, complete genome 17844-17869 0 1.0
AP018325_1 1.1|17844|26|AP018325|CRISPRCasFinder 17844-17869 26 AP018325 Nostoc sp. HK-01 plasmid plasmid7 DNA, complete genome 17779-17804 2 0.923

1. spacer 1.1|17844|26|AP018325|CRISPRCasFinder matches to AP018325 (Nostoc sp. HK-01 plasmid plasmid7 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtcagtaatgtgtttcacatggg	CRISPR spacer
ggtgtcagtaatgtgtttcacatggg	Protospacer
**************************

2. spacer 1.1|17844|26|AP018325|CRISPRCasFinder matches to AP018325 (Nostoc sp. HK-01 plasmid plasmid7 DNA, complete genome) position: , mismatch: 2, identity: 0.923

ggtgtcagtaatgtgtttcacatggg	CRISPR spacer
ggtgtcagtaatgtgtttcaaatgga	Protospacer
******************** ****.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage