CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP032820	Butyricimonas sp. H184 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
CP032819	Butyricimonas sp. H184 chromosome, complete genome	4 crisprs	DEDDh,cas3,RT,csa3,DinG,PD-DExK	0	1	4	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP032819_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032819_1

496491-496605

Orphan

Consensus_repeat	Method
GGGTCGCGGGTTCGAGTCCCGTTTTTCGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032819_1

>merge|CP032819|1|496491-496605|CRISPRCasFinder
GGGTCGCGGGTTCGAGTCCCGTTTTTCGCTCGCTTTTGAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTCCCAAGGTCGGGGTCGCGGGTTCGAGCCCCGTTTTTCGCTC

>CP032819|1|1|496491-496605|CRISPRCasFinder
GGGTCGCGGGTTCGAGTCCCGTTTTTCGCTC	GCTTTTGAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTCCCAAGGTCG
GGGTCGCGGGTTCGAGCCCCGTTTTTCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
CP032819.1\|AZS28449.1\|490533_491004_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28448.1\|490087_490537_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28447.1\|489542_489998_+\|SPOR-domain-containing-protein	unknown	unknown	gnl\|CDD\|335993
CP032819.1\|AZS28452.1\|495682_496195_-\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
CP032819.1\|AZS28458.1\|501070_501709_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28446.1\|488351_488612_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28456.1\|499910_500204_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28454.1\|498650_499544_+\|IS1595-family-transposase	unknown	unknown	gnl\|CDD\|372298
CP032819.1\|AZS28455.1\|499558_499909_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28451.1\|495002_495653_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
CP032819.1\|AZS28462.1\|507039_510729_+\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|235394
CP032819.1\|AZS28453.1\|496951_498097_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
CP032819.1\|AZS28444.1\|483844_484294_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28450.1\|491029_493774_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|372685
CP032819.1\|AZS28461.1\|505639_506953_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
CP032819.1\|AZS28460.1\|502136_505643_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
CP032819.1\|AZS28459.1\|501773_502076_-\|Dabb-family-protein	unknown	unknown	gnl\|CDD\|369566
CP032819.1\|AZS28445.1\|484328_487703_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271154
CP032819.1\|AZS28457.1\|500200_500707_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31843.1\|494044_494920_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|225438

Protein	Function_ID	Function_description	E-value
CP032819.1\|AZS28445.1\|484328_487703_+\|hypothetical-protein	gnl\|CDD\|271154	cd14488, CBM6-CBM35-CBM36_like_2, uncharacterized members of the carbohydrate binding module 6 (CBM6) and CBM35_like superfamily. Carbohydrate binding module family 6 (CBM6, family 6 CBM), also known as cellulose binding domain family VI (CBD VI), and related CBMs (CBM35 and CBM36). These are non-catalytic carbohydrate binding domains found in a range of enzymes that display activities against a diverse range of carbohydrate targets, including mannan, xylan, beta-glucans, cellulose, agarose, and arabinans. These domains facilitate the strong binding of the appended catalytic modules to their dedicated, insoluble substrates. Many of these CBMs are associated with glycoside hydrolase (GH) domains. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. CBM36s are calcium-dependent xylan binding domains. CBM35s display conserved specificity through extensive sequence similarity, but divergent function through their appended catalytic modules.	6.12456e-08
CP032819.1\|AZS28447.1\|489542_489998_+\|SPOR-domain-containing-protein	gnl\|CDD\|335993	pfam05036, SPOR, Sporulation related domain. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localizes to the septum ring complex.	2.02476e-08
CP032819.1\|AZS28452.1\|495682_496195_-\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	2.41137e-74
CP032819.1\|AZS28454.1\|498650_499544_+\|IS1595-family-transposase	gnl\|CDD\|372298	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	1.94234e-51
CP032819.1\|AZS28462.1\|507039_510729_+\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|235394	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional.	0
CP032819.1\|AZS28451.1\|495002_495653_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	1.60356e-117
CP032819.1\|AZS28453.1\|496951_498097_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.37157e-73
CP032819.1\|AZS28450.1\|491029_493774_-\|TonB-dependent-receptor	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.04003e-10
CP032819.1\|AZS28461.1\|505639_506953_+\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.07092e-155
CP032819.1\|AZS28459.1\|501773_502076_-\|Dabb-family-protein	gnl\|CDD\|369566	pfam07876, Dabb, Stress responsive A/B Barrel Domain. The function of this family is unknown, but it is upregulated in response to salt stress in Populus balsamifera. It is also found at the C-terminus of an fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus. Arthrobacter nicotinovorans ORF106 is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an a/b barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.	1.44333e-25
CP032819.1\|AZS28460.1\|502136_505643_+\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	4.81122e-41
CP032819.1\|AZS31843.1\|494044_494920_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	8.14009e-80

>CP032819.1|AZS28452.1|495682_496195_-|gamma-carbonic-anhydrase-family-protein
MAIIRELNGHTPKFGKNCFLAENAAVIGDVEMGDDCSIWYGAVLRGDVHYIKIGNKVNIQDNATIHATYQKSPTNIGNNVSIAHNAVVHGCTIHDNVLIGMGAIVLDNAVIESNSIVAAGSVVTKGTVVESGWVYAGTPAKKLKQMGPELLRDEVERIVNSYSMYASWYK
>CP032819.1|AZS28451.1|495002_495653_-|ribulose-phosphate-3-epimerase
MSVIVSPSLLSADFLHLSKDIEMVNRSQADWFHLDIMDGVFVPNISYGLPVVSQIKKMATKPLDVHLMIVQPERYVEAFHKAGADILTVHYEACTHLHRTIQQIKAQGMKAGVSLNPHTPVSLLEDIIKDIDVVLLMSVNPGFGGQSFIEQTINKVDKLKKLIIESNSHTLIEIDGGVNFETGKRLVNAGADALVAGSFVFNATDPEANIKGLKEL
>CP032819.1|AZS31843.1|494044_494920_-|ATP-binding-cassette-domain-containing-protein
MEAIIKLENAVIRQQKNTILKDVSLEIKEGEFVYLIGKVGSGKTSLLKTLYAELPLAYGKGEVAGYQLSKIKKSQIAYLRRKCGIVFQDFKLLTDRNVYANLEFVLKATGWRDKKAIKERINEVLDKVELPDKRDKFPHQLSGGEQQRIVLARALLNAPPIILADEPTGNIDPETSYRLIELLKDICDSGKTVVIATHQYDLIEHFPGRVFRCENGALQEDFSFAEKLAARNKVMNEGLESELINIDNSETIENQENIDLSEIQVEPHLKIIEEKKEKDNDDSDVIGFELL
>CP032819.1|AZS28450.1|491029_493774_-|TonB-dependent-receptor
MKISKLIMIMCFSVMGCALTQGQIYTPTTDNKIHFFGVIVDSITKEPLPGAVIYQITEEKFRKLTQFTVADKNGKFQFETPKYFSTRVEISCVGYKVRKFVLPKDHQTMNMGKVWLAPDIQKLDEVTVSARAKMYKQFGDTTRIYARSVKTLKGDAIIEILRQIPGIKVNQDGSVSMDGKPIEYTLLNDKLIFGDDKITALYTIDADQAMTIDIYDEEIESATSFKKQKSTVMNIRTKKDFNRYFTVEALLEGGQNHIKHENGNDPKIYNLNGKLGTFQEGFQAQLNTMKSNFMGQQDRYNQVLKNEMPRKQEYIRGKLVREFGDFNNYLRDRYSITGSYSKDKNQYIIRKENTYFPTEDFESQLANNENKQTSANTIYNVAVDGNYTSTPNIKAHFSGLFMSKDSDQSRVNQSETFRNGTLLTTTHNRINSEINHAYSSSYLNFAYKLNKKNFMHINLGINHEKPKRTESHDLEIMNSELETHTTLGVKNNSPHTDLSSSLHVTHLFDTSIVSGHSISLQIETLHKKAKINNTAVDKQTGLIDDIYSENYEMNTQTLSSGLEFIHKIPGRSITSRVTFNHIAINRDERIPEKYVIRKTFNTWSPFINISWEGEKRGNISLTFSISQQIPHVKLFSNILNISNPMFPQTGNPDLDPVKEYNFSMKHRLSSVKKQISLNTEVRLKYYTDNVVYKRQYFKNNTILPEYDSYEFPAGSTLISPINGNDYWDLKISSSIQKQINYLGRLETIVSYTFRDPQSEVAGRLVRQQEHKGTFNIKLATNFSRHIRLNLSNSTSYLWNQNSEKYKERGIQNKATVHLLLNFLQYANFESGYIMDYYNPSVSNTKINSHLLNAMLGYRIFKKRKGLISLNAFNILDKNTNFKTSVSNQFISNSWDRLFERYYTISFEYKFNSQK
>CP032819.1|AZS28449.1|490533_491004_-|hypothetical-protein
MKKQMKLLFTILFSCTITSVCAQLQQGQLMNIKFSTTKPIQKGDSVTIVVEWDPQYISTIIFENVYTPTKEEVNKRKFTLVVKPQKTTTYQITRIYTEWKPNTLPHTIKVLDENGVEIKEDKTEQKEVTTNKEIPTPNKHSNNSSKNKKKNKKKMP
>CP032819.1|AZS28448.1|490087_490537_-|hypothetical-protein
MKKYIIPLLIVLLCSIIVGGYYQLKKIGITNMSLNKDKPSIQKGDSVNITTQIVSEKKIMEIKYSTREPIPKGDSFTFHVTWDTLYISNIIFKDVYSPTKEEMKNGMYTLVVHPEKTTTYQIQKDYTTGESRILPHEVKVLDEHGIEIK
>CP032819.1|AZS28447.1|489542_489998_+|SPOR-domain-containing-protein
MRIIVSVILLAFITISCGTNKRVYAPPFEEEETESVVVKENVRTTAQNPTKKTENTKPVVSREENVTMTHGDVLKRYNVIVGSFSNVDNAVRLQAKLNGMGYHSIIMKNSAGMSRVSIAGFDEEGAAREELLKVREQYPEFADAWLLISKQ
>CP032819.1|AZS28446.1|488351_488612_+|hypothetical-protein
MTYQDALDYLRIAENAYNVQAYSESAEIVEKLAYFAIDRENGLSPQQRVEITEAVKQAIGRFTFCPDEYIWEKTCGLIDLFRWQIK
>CP032819.1|AZS28445.1|484328_487703_+|hypothetical-protein
MNIDFIMLVARNEMKLLRRNWLFIFFVFLTILGLILLQSVLQHVFPVYHFYALSCSIPFINTYLFNLFQSFFLVFIAGNYIYRDCKLDSLDAILVRPYSNLDYLIGKWIAIISLFITVYIINLIILGIFHIGNGSYPFTFFPYLFYLLTLALPVLLFVTGLTVWLNVVFKTPFLSMFILFGYILVDVFYLSDIQFGCFDFLAMTIPNVFSDIVGHVGVSTYLLQRFAYILFGISFLFFAVSRLQRLAGSIKDVRRCILLGIILFGIGVGCGWSYYWHYYKINQKRKQYIALYEEYKDNERIRISEQKIVYKQEGEWISVLDSITVYNPNKKKIKDVILYLNPSLTVNNVTCMGEKVHYRKNEQVLLLDYPIGCGEYRNFVIHYSGKIDESVCYLDVDDSEYNNTKWSNSILRYGKRTAMVEEAYTFLTPECLWYPVCAPLVNPVQPLASEISFSNYSLTVVHDTMYTVISQGKPSRSREGSYFKNTNPLPGLTLCMGKYNCRSLLIDSTLFEIYFFNEGNNFLAILDGSQKGVVEGIRGVKEKFEYKYGIKYPFSKMTLVEIPVSLCSYSRIGKEGSEFVQPELVFQPENWCKNSQYVSMKNYTREMEKMRPMQSVEVSEKEKISSWSESYFNSLAMEFPKMDLLSFLSNHQLFLTPVKNMSSVAFWFTNFTGCLYSDKYPYIDYFIRQMLMNNRVQILQNSIEVGSTKDDSVIDYLSSHSLQNVLSGSRLSSFEGSILKLKSQYFAKYIYCHIDQDEFKAFLVDFYSRNLFREVPFEQFVEEVQQKFHFDFLTFVEEFYRMSGVPFFFIRNLDQKIMTEGQFCETLVSFDVWNPSECNGVVTLYSEGDDYTPDLQEVKSIPVYSGTCIHVSVPMKKRKWNILLHTNFSQNNPDSYFKLFSQELKTTSDSFMEIVSIDTICFTSDKDEILVDNEDDMFCTTMSESRETWLSKLLHQNTPKYGMMTDFLQGKFSGWLPSVFNDAIGEPVRSFCGKVVKNGTGKATWKALLPEDGDYELYVYQLGLNHRFQYQVELFSYCYSVEQKGYKANIRVDILPSGTRNVFLQDNEGRDEDSTFDMQIFESRWIFLGKYKLSKGEISISLLDRGAFPGQLIFADAVKWVKRR
>CP032819.1|AZS28444.1|483844_484294_+|hypothetical-protein
MNCIILNTCAMCKKYLYMMSILICLLFVNFSAFCVDLVVVVCNNQGKPIVGTVVMIHESGTQDYLRVNTDKFGEACFAVAAFSHCDIFVPGLSMALLPVTSIMIPSNCNEIRVTVSPTVWSDSYTSLNYLVELLQLCAILPENKLIMIA
>CP032819.1|AZS28453.1|496951_498097_+|IS256-family-transposase
MEFTHEQISEIISEITNGESGFHGLVKRGLESLMLTERSLHNETLSDVSNGFRGRRVCHGGKVFELRVPRSRNSNFYPMLLGVLKDQEEEAQKLVSSLYCSGLTTEQVGKIYEQFYGKHYSKSQVSRLLNTAREDVNAWLGRKLEKRYPILYIDATYVLTRRDESVSNEAYYTVLGVKEDRTREVLTVVNFPVESATNWKDVFEDLKARGVQEVNLLVCDGLPGIENVLADTFPLADLQLCTVHLKRNIAGKVKPRDKKQVLEELKQICAPDQWEISPEKAFLKFKEFIARWQKSYPVLKRYCHDRYRFYFTYFKYEREIRGMIYTTNWIERLNRDYKRVINMRGAMPNPRAVILLMGTVAQNADIYKYPIYNFLESRLFY
>CP032819.1|AZS28454.1|498650_499544_+|IS1595-family-transposase
MSNNANLFYFFKQFPDEDSCRKYLEKRRWGNTPTCPHCGNAQKIYRYKNGKTFKCAHCKKQFSVKTGTIYENSNIPLQKWFLTFYLISLSKKGISSIELSKTIGVTQKSAWYLLHKVRYMLEHRNSDNQLRGTVEVDETYVGGKKKGKRGRGSENKTPVFGAVQRGGRLSITPVPNAKRKTLEPIIHKRVKKGTHINSDEWWAYTKLCSDYAHDVVNHRRKEYVRGKVHTNTIEGAWSHLKRSIMGTYHRPSREHLSKYCAEFEYNYNTRKNSPEIKFKKIIDKNLIRVSYRTITGT
>CP032819.1|AZS28455.1|499558_499909_+|hypothetical-protein
METVSVKLVVFKHPEPARWDTYCSYCPELQYFFGRGETVNEVVEQVHQTLLEELQNRNAYKNLHNLGWNITDTSIKVPIFTDEEAVSLTEQSYEVTISNYQIVKIDVEVPPARKLW
>CP032819.1|AZS28456.1|499910_500204_+|hypothetical-protein
MYPIATDIFEHFLSESGFTCTNITNGFDIHKKGELYIKIPQKKNLTKNQVKNLLTKAGLQIEDFNLYIEHTKATNLFNFLVDESLKGPSLKNKNTES
>CP032819.1|AZS28457.1|500200_500707_-|hypothetical-protein
MEKLLLALCLLFVSCGNNKKTESTTQETSQPVTETKAAKEPKTLIAGDELTFPSKNGGEVKFLFKEINTIKLSDGTYNLVLKVQIKNNLTQQLLISDVSWKLTDTDMIEVEESGVYDSEFEMFKPAMFFFTTVDAGFGKVEEVGYKVNKGTYYLSIWGYTSAKIEIRD
>CP032819.1|AZS28458.1|501070_501709_+|hypothetical-protein
MISIAFLLSSYSIAINDNKKNSELGVALTSREIHAIKDLKEMVLGFTGKSRMTAIPFSFAEILNIDSTNITLLPYYDFDTAIFYEDPSPEKILESLTVSDDLYFAISKDGCLAYSLLAKKKEDSWVLSRFSENWGEVIKWFPERLQDADSRDFKIFRVGGIEYFLYYKNGKTIYSTNIGQEISEEILCEIILESIHQVDENKKYLDSIGVHF
>CP032819.1|AZS28459.1|501773_502076_-|Dabb-family-protein
MLKHIVMWKLKEFAEGKTKAENALIMKESLERLVGIVPEIKSLQVGINEKTSDMAYDAVLISTFEDTDALARYKVHPEHVKVSNYCKKIRDSRVFVDFHE
>CP032819.1|AZS28460.1|502136_505643_+|AAA-family-ATPase
MNASEIGGGLKNECKNKRVMVEKARKSKISKKQTVTDINFKFKSIRTSCSEVVDFTGNKRYRTVFRLNEIETLFVDTEVINKQFDEKPWDAEIVAALIYMQGDRPMLVAQKGGKVTIPETESVFQFSTTFSAEDFTDFKFQEGVYRVQVMIDGQAGVSDEIHLLEPHDLFRDYFQLLDIGFDKCVEEAPDVQRPHSYQAFSAKGLEDIRFYLVAENFLSSEWTYEFLINVFDSNGILKASRVAKGNYYIPNREGKRLLCFALDLGAGLNNFWEEGKYRVDVLCFDQPVIHLEFSIGEQDLPYNFTDEIAEVNGQVHEVAGVPSTPQDKEEALSRLYQLVGLRKVKEEITRMYELAEFVKMRQENGFNDKLPVLNMILMGNPGTGKHLVTEITGEMFYRLGVLVNGKVHRYKREDFTRPGMDAEEQLIREAIAKSMGGILLIEDADELYPTNDPNDPAMRIFTVLLGILEQEQPSLLVVMAGDVMTLQAIVEGVPGMKKCFPYQFVFDDYSAEELMEITHQMLEKRQFKFTPEAEDKFSDMLKDCCSVRESGFSNGRFIEERLDDASTRMAKRLMSNHKGTRTKEDMMLIQVEDIDAPEQPDPSKSVDALNEMIGSKELKNSLISYINYIYFIRERQKHGYADVIPPLHMLFTGNRGTGKTTVARMLGEIFESAGILESSMVTVRSRGELIGDGSIPPQQIAMYVFEQARGGILFLEDAHTLFQDNVGAAALSVIFGQLSPTDNGDTIVILSGDPEAMDKALAGNPKVKTLFPYHFHFSDYTPEELLEIAVQKVAEKNYTLHPKAKEAFKALVSQVCNEHDKFFGNALFVEKMVDKAIHNLSARTMKIRKERELTRKEITTLMAVDIPTATSELPNSYRDTFDEKEIASALKDLDHMVGQTKLKKQIHDFVDLARHYNQQGIKLNTRVSLQWCFTGNSGMGKGTVARIIARIYKAMGIIDKSEVTSFKVERLLGLTEEDVIQSIGTALLQSKGGLFFFDEDSSSLNEVAGFRDRVRAILVNQLATQPGAYNVIYAKQDPPRQIINDEVEKVSDMINILVFEDYTADQLMEILKRDLATDNTRMTRTAQQHMEQFISYIVANKKRSHASARLIKLVAEMMMRNRVQRLAKSKKANDMETKHSVTKQDVEMFTPAMLDSMISERNTIGYKQ
>CP032819.1|AZS28461.1|505639_506953_+|MATE-family-efflux-transporter
MNRRILHLAIPSIVSNITVPLLGLVDVTIVGHLGATAYIGAIAVGGLLFNILYWNFGFLRMGTSGLTSQAYGRKDKDAEIRILVQAVSVGLFSALAMLILQYPIERLAFRLLDTSAEVEQYTVTYFRICIWGAPAVLAQYGFTGWFIGMQNSRYPMYIAIVMNVINIVCSSCFVFLFGMKVEGVALGTVVAQYSGVMMALGLWFYNYKELWGRMTFKGSLQLIAMRRFFAVNRDIFLRTLCLIGVTTFFTSTGARQGDVILAVNTLLMQLFTLFSYIMDGFAYAGEALSGRYVGACNLIQLKRAVRALFGWGVGLSLVFTLLYGVGGENFLGLLTNDKIVIETAGHYFYWVLAIPLAGFAAFLWDGILIGATATRFMLWSMLVASGSFFVIYYCFSGATNNHMLWLAFLVYLALRGGMQTLWSRRVFTLEYLQRLRS
>CP032819.1|AZS28462.1|507039_510729_+|phosphoribosylformylglycinamidine-synthase
MAIVFYQKDATVYAVHYKESENPLDVSKLEWLFSGAKKVQSNSLENFFVGPRREMITPWSTNAVEITQNMGISGILRIEEFTRVEDEKAAFDPMLQAFYKGLNQDTFTIDKKPDPIVYIEDIRAYNQQEGLALNEDEISYLEGLSKKLNRRLTDSEVFGFSQVNSEHCRHKIFGGTFIIDGEEQEESLFSMIKKTSRTNPNRIVSAYKDNCAFIEGPAAVQFAPATPDKPDFYTQKDINTVISLKAETHNFPTTVEPFNGAATGSGGEIRDRIAGGQAALPLAGTAVYMTSYPRLEAGRSWESAIDPRKWLYQTPEDILIKASNGASDFGNKFGQPLIVGSVFTFEHEEHEKTYGYDKVIMQAGGIGFANKEQAMKKTPEAGEQVVLLGGDNYRIGMGGGAVSSVDTGVYANAIELNAVQRSNPEMQRRVCNAIRSMAESDVNPIVSIHDHGAGGHLNCLSELVEETGGLIHLEKLPVGDPTLSDKEIVGNESQERMGLVMKAKDVETLQRVADRERAPMYVIGETTGDHRFVFEDARTGEKPIDLEMTDMFGNPPKTVMEDKTQREHFADIEYSEDKVEEYIEQVLQLEAVACKDWLTNKVDRSVTGRVARQQCAGPLQLPLNDLGAMALDYRGERGIATSIGHAPVAALANPACGSRLAIAEALTNLVWAPIEQGIKGVSLSANWMWPCKNAGEDARLYKAVQAASDFAIELGINIPTGKDSLSMTQKYGKDKVYAPGTVIISTVGEVTDVKKIVSPVLKPDQDSEIVYIDFSFDKLQLGGSSLAQVLNRVGKETPDVKDSVYFVDAFMAIQRLVEEGYVLAGHDISAGGMITTLLEMCFADNRLGLNIDFSYLAEKDIVKILFAENPGVLVQIKDCKKVAAILDEAGVAYNFLGRLGKAGKLNIKKDSKTFNLDIPSLRDLWFKTSYLLDRRQSGNELALERYKNYKNHDLKYKFTPSFSGKLSQYGLDVNRVKPSGIKAAVIREKGCQCERETAWAMHLAGFDVKDVHMTDLVSGRETLEDVNFIVFVGGFSNSDVLGSAKGWAGAFKYNEKARVALENFYKRENTLSLGICNGCQLMVELDLVYPEQGEKVKMLHNTSHKFESAFLSVDVVESNSVLLKSLAGSRLGIWVAHGEGRFQLPYGQEEYNIPLRYSHDTYPANPNGSSFATAAICSKDGRHLAMMPHLERSLHPWNWGYYAEDRNGDEVSPWIEAFVNARLWIEEHK

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Crispr_ID: CP032819_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032819_2

783336-783424

Orphan

Consensus_repeat	Method
TGACAAAATCAAGGGATTAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032819_2

>merge|CP032819|2|783336-783424|CRISPRCasFinder
TGACAAAATCAAGGGATTAAAAATAACACAATTTGATAAAATCAAGGGGATATTTTTCTCATTTTATGATAAAATCAAGGGATTAAAAA

>CP032819|2|2|783336-783424|CRISPRCasFinder
TGACAAAATCAAGGGATTAAAAA	TAACACAATTTGATAAAATCAAGGGGATATTTTTCTCATTTTA
TGATAAAATCAAGGGATTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP032819.1\|AZS28684.1\|795964_797122_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|224890
CP032819.1\|AZS28679.1\|788737_789598_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28667.1\|771953_772952_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238824
CP032819.1\|AZS28680.1\|789601_790276_-\|TrmH-family-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349965
CP032819.1\|AZS28675.1\|783546_784746_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
CP032819.1\|AZS28677.1\|785893_786655_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
CP032819.1\|AZS28670.1\|775479_776313_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375016
CP032819.1\|AZS31867.1\|776325_777435_-\|DUF3575-domain-containing-protein	unknown	unknown	gnl\|CDD\|371897
CP032819.1\|AZS28676.1\|785298_785907_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP032819.1\|AZS28666.1\|771816_772065_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224182
CP032819.1\|AZS28678.1\|786812_788741_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|367566
CP032819.1\|AZS28682.1\|791154_792552_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS28672.1\|779728_780550_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP032819.1\|AZS28671.1\|777697_779635_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP032819.1\|AZS28668.1\|772948_773443_-\|helicase	unknown	unknown	gnl\|CDD\|366173
CP032819.1\|AZS28683.1\|792674_795860_-\|Dna2/Cas4-domain-containing-protein	unknown	unknown	gnl\|CDD\|237554
CP032819.1\|AZS28669.1\|773611_775444_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224182
CP032819.1\|AZS28673.1\|780641_781562_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
CP032819.1\|AZS28674.1\|781942_783289_-\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|379049
CP032819.1\|AZS28681.1\|790449_790719_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853

Protein	Function_ID	Function_description	E-value
CP032819.1\|AZS28684.1\|795964_797122_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|224890	COG1979, COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion].	0
CP032819.1\|AZS28667.1\|771953_772952_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|238824	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	6.59878e-31
CP032819.1\|AZS28680.1\|789601_790276_-\|TrmH-family-RNA-methyltransferase	gnl\|CDD\|349965	cd18092, SpoU-like_TrmH, SAM-dependent tRNA methylase related to TrmH. TrmH catalyzes the transfer of the methyl group from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of the ribose of the universally conserved guanosine 18 (G18) position in tRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.25001e-74
CP032819.1\|AZS28675.1\|783546_784746_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.98923e-57
CP032819.1\|AZS28677.1\|785893_786655_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	5.64506e-07
CP032819.1\|AZS28670.1\|775479_776313_-\|hypothetical-protein	gnl\|CDD\|375016	pfam17145, DUF5119, Domain of unknown function (DUF5119). This is a family of uncharacterized Bacteroidia sequences.	1.82331e-08
CP032819.1\|AZS31867.1\|776325_777435_-\|DUF3575-domain-containing-protein	gnl\|CDD\|371897	pfam12099, DUF3575, Protein of unknown function (DUF3575). This family of proteins are functionally uncharacterized. This family is only found in bacteria. Proteins in this family are typically between 187 to 236 amino acids in length.	9.36706e-42
CP032819.1\|AZS28676.1\|785298_785907_-\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.87832e-20
CP032819.1\|AZS28666.1\|771816_772065_-\|hypothetical-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	1.91163e-06
CP032819.1\|AZS28678.1\|786812_788741_-\|dihydrofolate-reductase	gnl\|CDD\|367566	pfam03571, Peptidase_M49, Peptidase family M49.	2.21931e-34
CP032819.1\|AZS28672.1\|779728_780550_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.95667e-21
CP032819.1\|AZS28671.1\|777697_779635_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.10132e-14
CP032819.1\|AZS28668.1\|772948_773443_-\|helicase	gnl\|CDD\|366173	pfam00570, HRDC, HRDC domain. The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid binding. Mutations in the HRDC domain cause human disease. It is interesting to note that the RecQ helicase in Deinococcus radiodurans has three tandem HRDC domains.	3.73532e-16
CP032819.1\|AZS28683.1\|792674_795860_-\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|237554	PRK13909, PRK13909, RecB-like helicase.	9.12395e-62
CP032819.1\|AZS28669.1\|773611_775444_-\|hypothetical-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	6.51216e-47
CP032819.1\|AZS28673.1\|780641_781562_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.19862e-16
CP032819.1\|AZS28674.1\|781942_783289_-\|DUF4143-domain-containing-protein	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	3.08884e-31
CP032819.1\|AZS28681.1\|790449_790719_-\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	2.93176e-42

>CP032819.1|AZS28674.1|781942_783289_-|DUF4143-domain-containing-protein
MGRYLPRSIDNILLAWKKESKHKPLLLRGARQVGKSSAVKHLALEFDNYVEVNFEKQPQLKELFVGELDVKQIVAKLAVFFGVTIQPGKTLLFFDEIQMCKEAISSLRFFYEDYQELHVIAAGSLLEFVLNEIPTYGVGRIRSLFVYPMTFDEFLMATGNEKLIIEKKAASASRPLMEVFHQKLVELFRIYLMVGGMPESVVTWVDEGDYLQCQQVQDEIIVSYEDDFAKYKKRVDTTLLRLTVRGVVHQVGEKLMYSRISRDYRSGQVKEALELLRLAGLIIPVVHTAANGLPLGAECNDSFVKYLYFDSGLLLRILNMDLGDISKITEQLLVGGATDLVNKGFLTEMVAGLELLRYQSPTQRHDLYFWMRTEKNSMAEVDYLITRNLKILPIEIKAGIKGGMKSLFNFMKDKNVEVGIRSSLENFGEIISDGKRVEICPLYALSNL
>CP032819.1|AZS28673.1|780641_781562_+|DMT-family-transporter
MKKDELKGHISMTTANMMWGLMSPISKMVLITSIITPFIIVEIRIIGAAILFWIASIFTKREHVSPPDLLKLFFAAMLGVLFNQGLFTIGLGMTSPVDASIITTSTPILTMIIAAIYLKEPITSKKVSGIFLGASGALLLIVSNQNIGGTTHNSNIWGDTVCLVAELSFALYLVLFKQLISRYSPITLMKWMFTYAAICITPFSFQNMTQLEWLSLEPNTWYGLSFILLGSTFVSYLLSPIGQRHLRPTVVSMYCYVQPIIASCVAVYWGMDSFNLLKIIAVICVFSGVFLVTRSKSRADLEAEVN
>CP032819.1|AZS28672.1|779728_780550_-|AraC-family-transcriptional-regulator
MKRENMFQAFELIVREYNTFPLPVHQHTFFELAYIVSGTGTFQVSLHDTPYSAGSLFLILPNTSHVFKIESYSHFVYLRFTEHYLEQYFTSDERDLIRSVQHTGSVLCDPKDRENVRDLVNVIVREYTQVRVYSNELLNYWLRSIIVLIVRNLIVSESLGVFRVEEEKIMQIIQYIQAHIREPRLLQLASLGQRFHLSETYIGRYFKRHTNENLKDYILRCRLASVEDLLLHTSMRINEIAAIMNYTDESHLIREFKKYKNMSPSDFRSGRKN
>CP032819.1|AZS28671.1|777697_779635_-|AraC-family-transcriptional-regulator
MNVNKCPLKYVISLCLTVWAAGALFAQPVVSSSDSAYGRALYKRIMRLNPDSLLRAHADPAVYQRTITAESGSDSIYSREDKRWFYIDRNEFHRVIAAGPSYDTYEYIYATYKGYFYHLSREKLLHEADLAEQAADKYPGDALRNEADYLRVWYNNLGRDSTVWIAEQQAAIKAFQRKGATWWALRVKGHLFQLTAGFGTSYPVAFATAEELIHDIDGLDCRQYPFNGNMYGDIGLLYYKFRDYEAAVPLLKKATRETPGFYFDDSNLKARNSLAIYYRQSGDRKRSDDYFISILQSPDTIYARAVYDAVALANLAHNLTRAGLYCEAIGLYELSLPIMISDNDYSFASGIAVGMAECYMGLDNWEWAKQWADTATAYIREHIHFINPHRARQIYPILAKYHQQKGDAATAGKYIDSLSMAHADYRDEFDAMLLMRTRQELLAEKNRSQHERLQQQQTAITRLVVFAVIAVLVSMLIYYLYHKKKAAYRELVEKNKRWADSDRLEQIIDPVSPNHTITEEKGEDGNRQQGPTEKDVELAARIHKIMVEGQIYRDNSLSLDTLSQKLEVTRETVSRAINRTTGKNFTRFLNEYRVKEAVRILSTGRNHTVNFDELAEQVGFNSRITFHRAFKQLTGLPPAEFKRNS
>CP032819.1|AZS31867.1|776325_777435_-|DUF3575-domain-containing-protein
MMRKTLLAGLFLLFLSLPGYGSETLYSGSPTGGDTIITFRFVPGEDMFYVPYGGNNTELDRLYALVDEYRAEITSGRMPVDVDGYCASGETPEASFRIAVTRSNRVKSELIVHKRLAEEHFITKNHVSAYTAPDGKTYRDMVVVTLRIPAKEQPKQPKLVKEEPRCEEPPVEERQPESVVEQQPEPVVEIAVPAKFYCFAVRTNLLYDAFLLPTLGVEWRVNRHIGIKVDGSHSWLGNEKGKVQKIWLVSPEVRWYLLNNKRFYVGVGANIGEYNIYKGMLGSLFSDDTGYQGKLWGAGLTVGYQLCLSHRFSFDFNLGLGYTRMEYDRFTVSNKVRVFKDRDKTKNFWSPTQAGISLIWTIGSNNIVR
>CP032819.1|AZS28670.1|775479_776313_-|hypothetical-protein
MTVTKLMMAAGAIIFLTACDVKDPIHETDHPDKAKITVTADWSGIGQGIAKPSGYTVAFGDRTFTAMADKYTLPDLIEPGNYTLYFYHEADNITINGTASTADYAAGMPGWFFTGRLDAVIDGGKHHELTVAMKQQVRQLTLVIEATGGTVDKIATITGTLSGVAGSLDMSNDTHGTPSDVALTFAKGTDGKWTATVHLLGITGAKQKLSGTIKFTDGTPDDMILDSDLTAALATFNDNKNEPLTLGGQAEETPSPAGFTTIINAWNKITGGSVIAN
>CP032819.1|AZS28669.1|773611_775444_-|hypothetical-protein
MNKKKLLLLLAFPLFLLAGCGHDDIEGDGPDIPVGQNGDIKFKIGFVQPDGVAYATEDNDAPRTRVATDNQFRSTWEDGDEIGVFAVTHGQPLAASDNFIHNVKLTYSSADDSWSGAVYWPTASSGITSLDFYAYYPYDDNGGTPATLDPIAITFTVKTDQSGKTTVGSAEKSNYNLSDLLTAKADNTGSGYGKGETVSLQFSHALAMVQVSIDDVKYKALNTNEDITVELRNVRTAAGLNLFSGAVAASGDAGGVTMRRIEQPSDADYESSFTFCALIPAQVVARDARIFLISNGDLLLNGSPLTAQLDMTARTVESFTQQIPYTALPFIPAGSFIMGSPGNEPNRGTNETQHKVTLTKGFYITKYAITNSQYVEFLNAKGIQGEMLKHPNIPGAGGNMIGGEYSGEPLIYEGNTNQWGVKWDTNKWIPQPGYEDHPVVWVTWYGAKAYAEWVGGSLPTEAQWEYACRGDKGSLPFGVGDGYKLDNTLANFDWKYSWSWDGSSPTADITDTGTCPGVTQAVGSYSPNSYGLYDMHGNVLEWCLDNSDWVPADYGEASVTDPTGPSAGNRRVLRGGYYGFSAQYCRSAYRSNYEPDDANFNFGFRVVFVP
>CP032819.1|AZS28668.1|772948_773443_-|helicase
MQIQIFNIPLTDTGEALSEMNRFMTGRKVLEVEQRFFQNEKGGGWSFCVRYLPDVTQSGATGSRAKVDYKQVLTESQFAVFSRLREIRKALANEDGVPAYAVFTDEELAGICRLAELTEKSLATLPGIGEKKIIRYGKSMLKRYHTDNNNHTAQADEIQIGGQG
>CP032819.1|AZS28667.1|771953_772952_-|RNA-directed-DNA-polymerase
MKREGYLMERIADPDNLRLAFWKARKGKNYNDEVKHYRFRLDANLAELRRELLAGDVPVGDYRYFHIYDPKERMICAAAFRERVLHHAVMIVCHPVFERFQTDDSYASRIGKGQYAALEKAKTHTRHYRWLCKLDVRKFFDSIDHETLYGLLSRRFKDPALLGLFRRIIDSYRTAPGCGLPIGNLTSQHFANYYMAYADHHVREALRAPAYVRYMDDMVLWHDDKTELLRITAGLTSFIGERLWLTLKPPCINNTDKGVPFLGYVLFPGRVRLNRNSKKRFRCKMNSYDIKLDTGEWSQARYALHVQPLVAFTRFADAREFRQISAKKREVG
>CP032819.1|AZS28666.1|771816_772065_-|hypothetical-protein
MVSGAVCAPCAAAGGFHPLCRCAGIPADIGKEKGGWLKTGNNRVLRGGYYGNSAQYCRSAYRNNNKPDNANNNFGFRVVFVP
>CP032819.1|AZS28675.1|783546_784746_+|MFS-transporter
MNTSQVIITPGNITKDRKISICVFLSGFSCFAQLYYFQPLLPDLAQEFGLSASHSSLAISFSTLGMVIGLFTAMFVADTIPRKKLISAALLSSAVFSVICSYSPSFFLLVALSTLKGFLLSGATSVSLAYISEEVQPQNKGKITGLYIAGNALGGMGGRVISSYLSSEFSWRVASVSIGVLCALFAISFLIFSPRSVNFKPKRESFKSLIVSNLHLIVSVKLIPFYLIGSLMLGIFVSLYNYLGFYLIKEPFNFPPYLIHYIYFMYLFGVFGSIATAKLTALYNHFKILKTIIALSVAGLLLLYINNFWLVTLGLAIFTFNFFVVHVICNRIVSDYNLQKRSVTISIYLLFYYMGSSIWGSATGVILDHFGWQWFIAGLILLTFILYAIAYKGSKLMGN
>CP032819.1|AZS28676.1|785298_785907_-|DNA-binding-response-regulator
MQNNNKSYRIVIIEPSMIISTGLKKLIEMRNEFEVVAVIADCFHSLERINHLNPDVIIINPSVVELKKRQHLEELFDGVKDTAFVALVYQYIDPEVLKQYHTTIDIADDGDKIAQKLLHSIDALSAPADLLDKNELSEREKEILISLAKGKINKEIADLHHISVHTVITHRKNIIRKTGIKSVSGLTVYAILNNLIDINEVE
>CP032819.1|AZS28677.1|785893_786655_-|hemerythrin-domain-containing-protein
MNKLGLESIISNICGKNRDMKSHLFSADMKLADVIHADYSLLLLLHRFGINLGFGDKTVQECCEANHVSCTLFLMICNVYSNEQYLPTEDEIEGIGANVDQLIAYLKNSHSYYLDNRMLAIQEQLKEISEGCEQQHQQILYLFFNEYKNEVIRHFEYEEITVFPYISNMMKGVRPGDYDIGVFRGNHSNIDDKLNDLKNIIMKYLPGDTLSDMRIRVLFGIFALEEDLSKHSLIEDKILVPLVMKLEQRYAKQ
>CP032819.1|AZS28678.1|786812_788741_-|dihydrofolate-reductase
MKKQAYLLEQFDDIKILRYDVPAFEGLSLREKLFVYYLSQAALAGRDILWDQNNKYNLRVREALEKILRAYRGNRETEEFQAFLVYAKKVFFANGIHHHYSMEKFIPSFTPEYFKTLLREVGAEPLYGEVERVIFDPEYMAKRVVLDEGKDLVKASANHYYEGVTQEEVEKFYGEKKKENALLSWGLNSTLVRDEKGQLHEQIWFAGGKYGKEIRHVADYLKKASEYACNEHQKEVIEWLIRYYETGDLSWFDRYSIEWVKEVAAPIDFINGFIEVYGDPLAYKASWESVVQIMDEEACERTRKLADNAMWFEQNAPIDERFKKSEVVGITARVVQAAMLGGDCHPATPIGINLPNAEWIRERYGSKSVTLDNITYAYNQASLNSGVLDEFAYSDEEKELVRTYGYVGGNVHTDLHECLGHGSGKMLPGVGQEALKNYYSTIEEARADLFALYYVMDPKLVELGVIPSLDVAKSEYCNYIRNGLMVQLTRVKLGNNLEESHMRNRQLIASWVYEKGKETNVIERVNREGKTYFTIRDYEALRMLFGRLLAEVQRVKSEGDFEGARDLIENYGVRVDPVLHQEVLERYQKLNVAPYAGFVNPKYRLVEKEGSVVDVEIEYPTDFLTQMLEYGNNNEPDSPLFE
>CP032819.1|AZS28679.1|788737_789598_-|hypothetical-protein
MYYLKCKHCNHLNEVKSEYLVVCGLCNRKLEDNYKDWKVKHPEKSFEDFQREVCLTEEQVKRGDIVKPGGKKGNKKGWIAGCIGGILVVTLMVVFVMKGMKNDSDELYGDGNTPVSEQQWYTGTYAGGVSLATPKAMKSAGNVINKLPEEERPLVKEMQTFSYHANDLEFTYLYAEYTPEAGQVDLEKAVNAGLNQMKDQPGVFDLKNDIAYVEEGDLSGVVMQGTYVKRGTEYEFKITLYAAGLKLYQFISSNRKGDDTAREVARRIYGSLKISGYGTTAEGGTE
>CP032819.1|AZS28680.1|789601_790276_-|TrmH-family-RNA-methyltransferase
MHTVKEQVEYLSEFVTDYKNDLFRRLIAERTSYVTMVLEDFYQQHNCSAVLRSCDCFGIQNVHVIENTNTFKDNSEISMGAADWLTVHRHRKRENNTEETIDMLKSQGYRIVATTPHERDTFIDDIDLHKGKMAFFMGTELTGLSDDVLSRADEFVKVPMYGFTESYNVSVCAALLMYSVVQRLRQTDINWHLSEEERYQVLFAWYKRSIKASAQILERFNHNE
>CP032819.1|AZS28681.1|790449_790719_-|HU-family-DNA-binding-protein
MNKAQLIDAIAEKAGLTKADSKKALEAFVATIGESLKKDEKVALVGFGSFSVSERSARSGRNPQTGKTIQIPAKKVVRFKAGAELEGQL
>CP032819.1|AZS28682.1|791154_792552_+|hypothetical-protein
MKKSFTFLKVSYIAMLLSVMSISEGFAQGLRTSYFMDNVPSRLKMNPALQPARGYFNIPAIGAIGLSASSNKLSIDDFIDIIQNKNGFLNSDQFINRLDNKNTMNIDLTLDLISFGIYSGKGFWTVNLGARSIISASIPKSMFELARYANTNPELDENVNLNYDIKDMELHANIFTEIGLGYSRPVTKDLTVGGRVKLLVGLGNLDAKIDQIYAHVNTDDLASYQSWKVKTKGRLEASMKGLEFSYNSDSGYIDDIDFDSPGISGYGLGLDLGASYNLFGCINLSAAIIDLGFINWTKSSTTIATTNSEHDYGDFANSGSDEYDPDNTEAGDVFDFDLIQFQTEENAKSRSTSLRSTLNLGAEYTLLNNKLGFGLLSSTQFTQPEAYSELTISANYRPKNWFGVSLSYSFLHSDFETLGIGLKLGSIFIGSDYLMTKSLGDANRANVYLGVSVPLGKKRQDYRRK
>CP032819.1|AZS28683.1|792674_795860_-|Dna2/Cas4-domain-containing-protein
MLRVYRASAGAGKTFALTMEYFKIVFNASSEYKNVLAVTFTNKATEEMKSRIVRELNKLAEGQKSDYREELKRALKLTDEQVKERAGVLRTLILHDYGRLSVTTIDRFFQRVIKAFTRELGIFPGYNVELDSDYVLQRAVDQVMQRMNKDKELRTWITELMSDSVEDAKSWSVKNKIAELGKELFGESYMLFDKEVREKFNDRGFLKGYKMFLQGVVSRFEDRMEAFGQSACRYIEESGLHAEDFKGGKRSFINYFYKLRDKGLDKIPDSARKAIDNPDEWVTKKQDSSLRALIENVYPELNTSLRESVEYYDKNLPDYVSAVLLSKNLYQLGILNDLYGAVRDYCDEKGLMLLSDTTRLLNMLIAGNDTSFLFEKTGNFYKHIMIDEFQDTSTMQWGNFLPLVVNTLSEGGRALIVGDVKQSIYRWRNGDWRLLAEGVERDLATFGTDNVILEHNWRSCKEVVEFNNRFFVLAARQLKELYDSECGEENVYSRSITEAYHHPEQLVSRSGNGYVEIRFGGEKQEEGSDVEIMNAVVDVINDTIHRGGELKNCVILVRNGKEGAFVADYLIEYNKRENIPFPITFISNDSLYVSSSPYVELIINVLRYMVEPYDAVNRTVLLYNYRTFVRGENTSQEDLLFKAGSTDESFLDTIDLPFLREPEKLTCSSLFEITESIIEVFGLRARTEELPYLIAFQDILFDYEKNNTNSIPVFLEWWEKEKDKKVLSTSEEVDAVRILTIHKSKGLEFKTVIIPFCAWDLDDTRHGRRIWCQNREKGFRELEYAPLNYSSKLLDSHFREDYLHEHVKAYVDNLNLLYVAFTRAERELYVLPYAPKITKEGKPSDIGAFLFQVLETGEIPEWNSENSSLVIGEKQLITGKEKVEDDNTLSLAEYPIYELNERVSVRYKYEDYTDPEKTETSAVDEGKILHEIFRRIETVEDVDRAVNNMYASGLLTSVERADYREQVVAYLNNTPHSEWFDGKYKVINERDILFCHSGKARPDRVMIDGKKAIVVDYKFGQKEEKSYIRQVGFYCKTLRQMGYTDVSGYIWYVPLGKVVSV
>CP032819.1|AZS28684.1|795964_797122_-|iron-containing-alcohol-dehydrogenase
MRNFDYYNPVKILFGKGKIAEIAKWIPKGMKVMMTYGGGSIKKNGVYEQVMDALQGFDIVEFGGIEPNPKYETLMRAVELAKQENVGFLLAVGGGSVIDGTKFIAAATCFEGSEPWDIVAKGARVNAALPLGTVLTLPATGSEMNNGGVITRQATLEKLAFSSRHVFPKFSVLDPMVTYSLPMKQVANGVVDTFVHVMEQYYTFPEQAEIQDRFSESILKTLIELGPKLMHAEKPNYEDRANFMWAATMGLNGLIACGVSQDWSTHHIGHELTAFNGLDHGITLAIVLPGVMNATKIKRREKLLQYASRVWNIDTDQPDAADQAIARTEQFFNELGVKTRLSDYGVGIDTIDRIEKRFRERGNFALGGIDDVNVDNVRAILTSRL

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Crispr_ID: CP032819_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032819_3

1581503-1581584

Orphan

Consensus_repeat	Method
CTGTTACATTGCGGCAATTTCTCGCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032819_3

>merge|CP032819|3|1581503-1581584|CRISPRCasFinder
CTGTTACATTGCGGCAATTTCTCGCGTTCGTTTCTCCCGGGGAGGAGGCGCAGCGCTGTTACATTGCGGCAGTTTCTCGCGT

>CP032819|3|3|1581503-1581584|CRISPRCasFinder
CTGTTACATTGCGGCAATTTCTCGCGT	TCGTTTCTCCCGGGGAGGAGGCGCAGCG
CTGTTACATTGCGGCAGTTTCTCGCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP032819.1\|AZS29377.1\|1585289_1585838_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29370.1\|1578118_1579615_+\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
CP032819.1\|AZS29368.1\|1575902_1576136_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29373.1\|1581668_1582238_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29369.1\|1576144_1578049_+\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
CP032819.1\|AZS29366.1\|1574133_1574586_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|235637
CP032819.1\|AZS29381.1\|1591895_1592372_-\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
CP032819.1\|AZS29372.1\|1579955_1581377_+\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
CP032819.1\|AZS31924.1\|1575570_1575900_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
CP032819.1\|AZS29378.1\|1587845_1590071_-\|patatin	unknown	unknown	gnl\|CDD\|132844
CP032819.1\|AZS29364.1\|1571149_1572775_+\|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl\|CDD\|180385
CP032819.1\|AZS29374.1\|1582305_1583040_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31925.1\|1586104_1587103_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
CP032819.1\|AZS29379.1\|1590319_1590979_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29371.1\|1579658_1579934_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29375.1\|1583436_1584228_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29365.1\|1573046_1574123_+\|NADH-quinone-oxidoreductase-subunit-NuoH	unknown	unknown	gnl\|CDD\|376297
CP032819.1\|AZS29380.1\|1590959_1591754_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|365906
CP032819.1\|AZS29376.1\|1584390_1585047_-\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS29367.1\|1574818_1575331_+\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|235844

Protein	Function_ID	Function_description	E-value
CP032819.1\|AZS29370.1\|1578118_1579615_+\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	7.66707e-122
CP032819.1\|AZS29369.1\|1576144_1578049_+\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
CP032819.1\|AZS29366.1\|1574133_1574586_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	1.26726e-33
CP032819.1\|AZS29381.1\|1591895_1592372_-\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	6.34025e-82
CP032819.1\|AZS29372.1\|1579955_1581377_+\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	6.67892e-123
CP032819.1\|AZS31924.1\|1575570_1575900_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	1.01676e-25
CP032819.1\|AZS29364.1\|1571149_1572775_+\|NADH-quinone-oxidoreductase-subunit-D	gnl\|CDD\|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	1.56885e-157
CP032819.1\|AZS29378.1\|1587845_1590071_-\|patatin	gnl\|CDD\|132844	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE hydrolyzes sn-1 esters in lysophosphatidylcholine and lysophosphatidic acid, but shows no lipase activity with substrates like triacylglycerols (TG), cholesteryl esters, retinyl esters (RE), phosphatidylcholine (PC), or monoacylglycerol (MG). This family includes subfamily of PNPLA6 (NTE) and PNPLA7 (NRE)-like phospholipases.	8.80178e-68
CP032819.1\|AZS31925.1\|1586104_1587103_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	6.78475e-23
CP032819.1\|AZS29367.1\|1574818_1575331_+\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	2.43398e-25
CP032819.1\|AZS29365.1\|1573046_1574123_+\|NADH-quinone-oxidoreductase-subunit-NuoH	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	1.01466e-133
CP032819.1\|AZS29380.1\|1590959_1591754_-\|metallophosphoesterase	gnl\|CDD\|365906	pfam00149, Metallophos, Calcineurin-like phosphoesterase. This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.	7.35064e-09

>CP032819.1|AZS29372.1|1579955_1581377_+|NADH-quinone-oxidoreductase-subunit-N
MVYTNFLHMQQEISLVAVIVLLLIYDIFGTPKSLKYIQPVACLLVGIHILFNICPTPDVTAFGGMYHNTAMGSVMKTILGIGTLLVFMQANNWLSGERAIIRRGEFYMITLATLLGMYFMISAGNFLMFFIGLETASIPMATLAAFDKYKQQSAEAGAKYILTAVFASGLSLYGISLIYGTASTLYFEDIPAGLNGSPLQLMAFVFFFVGLGFKLSLVPFHQWTPDVYEGAPTSVTAYLSVISKGAAAFVLMTILYKVFAPLVNEWQTILYWVIVASITLANLFAIRQQNLKRFLAYSSISQAGYIMLGVISGTALGMTGLVYYVLVYMLSNLAAFGVIAVVEHRSGKITIDDYNGLYATNPRLSFVMMLALFSLAGIPPFAGFFSKFFIFAAAAQQGYYVLVFIALLNTIISLYYYLRVVKAMFINKSEQPIAPFASDNYSRVSLVICSAGILLVGLLSIVYESIGTYSFGM
>CP032819.1|AZS29371.1|1579658_1579934_+|hypothetical-protein
MKQLPPPTPPYTGGEPNARNRRNATAPHLHPFPKGRAMDTQIHRDPILPLPKGRAMDFQIHRNAILPLCKGELEGVAPAPAPCGRNLKFKI
>CP032819.1|AZS29370.1|1578118_1579615_+|NADH-quinone-oxidoreductase-subunit-M
MNFLSLFVLIPILTMCGLFLSRNLQQIRVAVATGASLLLALAVGLVFAYLGERAAGNTAEMLFTASTIWYAPLNIHYSVGVDGISVAMLLLSAIIVFTGTFASWKMDFLQKEYFLWFNLLTIGVFGFFISVDLFTMFMFYEVALIPMYLLIGVWGSGKKEYAAMKLTLMLMGGSALLLVGILGIYFHSSATGALTMNLQEIARAHAMPENLQHWFFPLVFIGFGVLGALFPFHTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRVAIYLMPEAAKELSWIFIILTGISVVYGAYSAIVQTDLKYINAYSSVSHCGLVLFAILMLNQTAMTGAVMQMLSHGLMTALFFALIGMIYGRTHTRDIREMGGLMKIMPYLGVCYVIAGLASLGLPGLSGFVAEMTVFVGAFQETDTFHRVFTIIACTSIVITAVYILRVVGKLLYGSVVNEHHYALSDANWYERFSTTILIIAIAGIGLAPLWLSDMIRTSLDSVLAALGRM
>CP032819.1|AZS29369.1|1576144_1578049_+|NADH-quinone-oxidoreductase-subunit-L
MEYTTLILTLPLLTFLALGLLGTKLKPATAGCIGTLSLAICALLAYMTAWQYFSMPRVEGVRLPVTPFNFEWLRFTRHLHIDLGILLDPISVMMLVVITTVSLMVHVYSLGYMHGEKGFQRYYAFLSLFSFSMLGLVVATNIFQMYIFWELVGVSSYLLIGFYYTKPEAVAASKKAFIVTRFADLGFLIGILLLSFYTKTFSFQLLTSGDTSLFAGAAGTTFMGCSVMSWAMALIFMGGAGKSAMFPLHIWLPDAMEGPTPVSALIHAATMVVAGVYLVARLFPVYYFEAPEVLVLIAVVGAVTSLYAAVVACVQTDIKRVLAFSTISQIGFMMVALGVSGMEGHEGLGYMASMFHLFTHAMFKALLFLGAGAIIHAVHSNEMSHMGGLRKYLPVTHATFLVACLAISGIPPFSGFFSKDEILTAAFMFSPVLGVVMSFIAALTAFYMFRLYYNIFWGKESTHEHTPHEAPKSMTLPLVFLAAVTLIAGFIPFGKFVSSNGLAYTIHLDWTIATASIIIAAASIALATWFYKGSNPVPDRLATAFSGLHRAAYRRFYMDELYLFITKRVIFNHVSRPIAWFDRHVIDGSLNGLANATRRFSYSIRGLQSGQVQQHAYVILLGSLLILVAILLIM
>CP032819.1|AZS29368.1|1575902_1576136_+|hypothetical-protein
MKKQLPPPTPPYTGGEPNARKHRDATAPRLLPLPKGRAMATQIHRDAILPLCKGELEGVVAAPAPCGRNLKSRNHKS
>CP032819.1|AZS31924.1|1575570_1575900_+|NADH-quinone-oxidoreductase-subunit-NuoK
MEYYLVISTIMLFAGIYGFITRRNLLAVLISIELILNSVDINFAVFNRYLFPEQLEGFFFTLFAIGVSACETAVAIAIIINIYRNIRNIQVKNLNELREEEDKQLKIEN
>CP032819.1|AZS29367.1|1574818_1575331_+|NADH-quinone-oxidoreductase-subunit-J
MSTAELQETVFFILATVIVVFSILTVTTNRILRSATYLLFVLFATAGIYFQLEYSFLGAVQLTIYAGGIIILYVFSILLTTPDKSKVSRLKNSKMFAGLITALAGTAICVYITLMHSFGPSRFVGGEINQKVIGTALMGTEKYQYLLPFEVISVLLLTCIIGGIMIARKR
>CP032819.1|AZS29366.1|1574133_1574586_+|4Fe-4S-dicluster-domain-containing-protein
MKSIIKYITTFFKGLLSLLTGMKVTLREFFTKKTTEQYPENRATLKMFDRFRGELVMPHDENNHHKCIACGICEMNCPNGTIKVTSELVTDEAGKKKKVLVKYRYDLGRCMFCQLCVKMCPQQAIEFRPTFEHAVYTRSKLVKYLHEEGM
>CP032819.1|AZS29365.1|1573046_1574123_+|NADH-quinone-oxidoreductase-subunit-NuoH
MFDFSTITQWVDELLRSFLPHAAATLVEFILVGLCLLVGYAVIALVLIYVERKVCAFFQCRIGPNRVGPYGIIQSVADMIKMLTKEIIDINHVDRFLFNLAPFVVIIASVLAFGCIPFAKGLHVIDFNVGIFFLIAVSSIGIVGILLAGWASNNKYSLIGAMRSGAQMISYELSIGLSILTVVVFTGSMQLSTIVDSQVNGWLLFKGHLPACIAFIVYIIAGTAETNRGPFDLPEADSELTAGYHTEYSGMHFGFFYLAEYLNMFVVASVASTLFLGGWMPLHVPGWENFNQIMDYIPSIFWFFGKTAVVIFIIMWFKWTFPRLRIDQLLRLEWRYLLPINLINLFLMVIIVVFKLHF
>CP032819.1|AZS29364.1|1571149_1572775_+|NADH-quinone-oxidoreductase-subunit-D
MLANKIKNIIPDAEIDESGILTVTVPPAKYRELALRLRHDHDLSFDFMICMTGMDWGDSLGVINLLQSTAHEHKLFLKTFTTDRENPELPTVSDIWATANLNEREVYDFFGIRFINHPDMRRLFLRNDWVGYPLRKDYNADPEINPVRLESEETLDAVPTFESDTQDGEVSEKENILFEEDEYVVNIGPQHPATHGVLRFRVSLEGEIVKKVDVNCGYIHRGIEKLCESLTYPQTLALTDRLDYLAAHQNRHALCMCIEEAMGLEIPERVKYIRTIMDELNRLSSHLLFWSCLCMDMGALTAFFYGFRDREKVLDIMEETTGGRLIQNYNVIGGVMADIHPNLIHRIKEFIKYLPPMLKEYHDVFTGNVIAQQRLKGVGILKKEDAISYGATGPTGRACGWSCDVRKHSPYGVYDKVDFKEILYTEGDSFARYMVRMDEILESLHILEQLVDNIPAGDYAVKTKPLIKLPEGHYFKSVEASRGEFGVYLESRGDKYPYRVKFRSPCLPLVSIVDLITKGGKIADLIAIGGTLDYVVPDIDR
>CP032819.1|AZS29373.1|1581668_1582238_-|hypothetical-protein
MKNSRFGCFVCLVGLLGGVSCEARKERVKVQGEMNQEGGRDKVYEAVFVLDRFKKMISVTCVSEEVIYPRYYGGTYINDAGKPVILTTDTTKRELIRKLAGCDEVVVLPCAISYRYLKDVDDKIKSCLGDRPGLIEKVGINTFGILTDKNCVDVSLVCCTPEKVELFKSLVVDDPCITFSENVSRVVLQ
>CP032819.1|AZS29374.1|1582305_1583040_-|hypothetical-protein
MSKKKKKKKKKMTSPFRQPSTTRSGGITTYYRKGKECQCASKRPAGSTEARDRRHANRSARQQLLTNVFKFVDRLVKTLLRKLAEANSWVPFAKDTSMSAPNLCHKVNASACGEHGVENFRAFMFSVGWLAVPLYTRVCRDGWTFTLEWRRHGILDEARDGDTLIMGYFYDCLPDAPRVLYLPAVTRGDGTATFTLPDPAGPGGEPLSPETVVHIYPYFKCPDVEEYTRSIYLRVAPGAEEVLG
>CP032819.1|AZS29375.1|1583436_1584228_+|hypothetical-protein
MARIKSTNFYQKSGKVANEVFSNLGNGEVGCRAKNSKQAPLNEEQKINASGFSALNTEVRYLNPVLRVTFPRDSNGTKWANRFTSVNKKREGVLTTTKINPDTPVNPKKKANEEYTSEIDWTRVLFAAGPLLAPSVNANRTNMSRKQILAEKTSFQSRVTPLSDADTPAVTAEEGEMYNITLTQVANVYEGAYCWTNDRVYTVIYSPDDHFALVKQLRDRGDGGITSIAIPSFVKPENIHVYSLAMTADGKITSNSVHSRLGE
>CP032819.1|AZS29376.1|1584390_1585047_-|hypothetical-protein
MKLILGILILLFSSLNDGTFSVKEKLQRTPYAELPFECIRRAPWGKPGYAITKEEYEHLPVFTYANLGLTERNDYDEEVTIFRKFASDFDNYCIVALEIGVSDPGKQLLVTYDNNGKLIDFLEAGIYDGGTENRLCLKQWRIDTNRKIMVTWIKALTGKEWNITKDFSSIQGQRIDCHYQIDKNGKFYKVKEIIYQAKNYPMSYLRSDKNLWEGDESF
>CP032819.1|AZS29377.1|1585289_1585838_-|hypothetical-protein
MKLLLLLFLIPVLKVSELNQPLYSSISNDTIMGKQASYCYMKDTRITTIIRNVNNVDTSEHVYFDNGEVVSWARFVARPIKFTQEELHSVFRKNLTDSEWDCIKGKVGFFLQIWVVADKKGNPVELEFTVRNTDPVFLKMTPDRLFQIEQELKQLLKTEIAEDEHDIKNVKHIVMVSYQDLK
>CP032819.1|AZS31925.1|1586104_1587103_-|IS110-family-transposase
MENFYFIGVDVSKKKLDFCVLLNGTIVLEEVVNNNIPSIRRFLETFLVDFKTSIDNLLVCAEHTGQYTFPLSIACQSLSCGLWLENPAQIKYSSGFSRGKNDKVDAHRIARYASRFSDNARYYQRPREEIERLKQLRNEQDLYKSDLAKYKGQLSDQREFMLDRVYQEKAQRLERLIEELEKLIKDIDLLVETIIRSCRVLWRQRELLLSVEGVGPSVALCLIIETEAFTRFDDPRKFACHAGVAPFRYTSGSSQHSRNKVSQRANKQIKTLLHMAALSITGRKSGELKAYYERKVKEGKNKMTVINAIRAKLIARMFAVIKKDQFYTPVYS
>CP032819.1|AZS29378.1|1587845_1590071_-|patatin
MKHLPLPSPATSRIPTLRRLLCLGLLLLLVPLAAEAQRKKVGVVLSGGGAKGVAHIGVLQVLEKAGIPVDVIVGTSMGSIVGGLYAIGYSADQLDSLVRVQDWMFLLSDKVNRYDLPFGEKEQDGKYLLSLPFDRGKKRPSGFISGQNVYNLFSDLTVGYHDSLDFLQLPIPFACVAADLFQREEIVMTSGNLVQAMRASMAIPGVFTPVRTGNRVLVDGGILNNFPTDVARRLGAEIVIGVDVQADLMKEDKLASVSGVIPQIINLLCMNKHEENVQLADLVIRPDVKGYSAASFSARSIDSLLARGKVAALQQWPAIMQVKELIGKPERSGREMPQAPRPDKIPIRNIIIRGLSPREEEWVRRKMRIEENSEITLHDIHREIATLYGTKAFAAVNYRLLGTVPRDLELTLQSNPMSTLNVGFRFDTEDMAALLFNTTLNNRGLRGSQLALTGRLSKNPYVKLEYSLENTFLRGFNLAYLFRYNDVNYYRKGRKTNNVTYRYHMGELGLSSLYLRNFKFKVGLRYEYFDYNSLLFSNEDEVMSVRPEGFFSYYGVAELDTYDRRFYPTRGISLQAAYSLYTDNLATYDGGSPFSALSIRFRPVLSLSDRLKMLPSAYGRVLIGHDPAYSYLNQLGGTEFGRYNAQQMPFAGINRVEVFENAVIVGRLQLRQRMGHKHYLSLTGNYALQDDNFFDLFGRKGIWGGGIGYSRDSMLGPIDLIFSFSDWSEKVEFYFNLGFYF
>CP032819.1|AZS29379.1|1590319_1590979_-|hypothetical-protein
MKWSIIRVGIVALFMGMTTIVSGMTEDDRAQRRAERHQRKLQQYRSGWNRLIPKYQNIQYAGSMGFLSLGVGWDYGREKQWETEIMFGLVPRFSSNKAKVTFTLKQNYAPWELPLGGKWWLEPLVTGLYMNTILSDDFWVKEPEKYPNNYYKFSTRVRFHVFAGQRIAIDLGPHSPFRRVTAFYELSTCDLYIISSATNKYVKTWDILSLSFGVKLHIL
>CP032819.1|AZS29380.1|1590959_1591754_-|metallophosphoesterase
MKKVILYGILLLLYRCDLIEYHPYDVRLHGQTGINAKNIARIEESCKGKDTLRFVLMGDSQRWYDETEAFVKALNNRDDVDFVIHGGDISDFGLTKEFLWVRDIMEKLKVPYVALLGNHDILGNGMDVFLKVYGDENFSFRAGNTKFICLNTNALEFDYSHPVPDFTFMYNELQDTVGCPRTIPVMHVQPFNVEFNNNVARGFHLLLQEFPGMEFCLHAHSHSLLHEELFNDGIPYIGCAAMKDKNYLLFTLTPGGYAYEVVYY
>CP032819.1|AZS29381.1|1591895_1592372_-|Cys-tRNA(Pro)-deacylase
MKAKINKTNAARLLDKAKIPYELIPYEVDENDLAATHVAAQLGENIEQVFKTLVLHGDRNGYFVCVIPGDHELDLKVAAKESGNKKADLIPMKELLPVTGYIRGGCSPIGMKKEFPTFIHASCLKFEYIYISAGIRGLQIRLNPKDLISYTRATLLPA

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Crispr_ID: CP032819_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032819_4

4554941-4555043

Orphan

Consensus_repeat	Method
TGGTTGTGCGTTTGGTTGTGCATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032819_4

>merge|CP032819|4|4554941-4555043|CRISPRCasFinder
TTTTTTAGGGGTTGGTTGTGCATTTGGTTGTGCGTTTGGTTGTGCATTTTTGTAATAAAAAAAACGAAATGTTTTTAATGGTTGTGCATTTGGTTGTGCATTT

>CP032819|4|4|4554941-4555043|CRISPRCasFinder
TTTTTTAGGGGTTGGTTGTGCATTT	GGTTGTGCGTTTGGTTGTGCATTTTTGTAATAAAAAAAACGAAATGTTTTTAA
TGGTTGTGCATTTGGTTGTGCATTT

Protein	Signature genes	Signature genes Name	Protein_function
CP032819.1\|AZS31518.1\|4546181_4546448_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31523.1\|4549241_4549607_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31530.1\|4556505_4558584_+\|kinase	unknown	unknown	gnl\|CDD\|366234
CP032819.1\|AZS31529.1\|4556029_4556215_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31525.1\|4550169_4551150_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376559
CP032819.1\|AZS31533.1\|4560205_4560826_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223993
CP032819.1\|AZS31517.1\|4545614_4546043_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31526.1\|4551364_4552231_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375182
CP032819.1\|AZS31531.1\|4559534_4559738_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31527.1\|4555268_4555652_-\|XRE-family-transcriptional-regulator	unknown	unknown	unknown
CP032819.1\|AZS31535.1\|4561073_4561784_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
CP032819.1\|AZS31532.1\|4559758_4560202_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31519.1\|4546612_4547101_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31520.1\|4547497_4547947_+\|DUF4304-domain-containing-protein	unknown	unknown	gnl\|CDD\|379489
CP032819.1\|AZS31528.1\|4555812_4556022_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS32132.1\|4558607_4559477_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
CP032819.1\|AZS31521.1\|4548085_4548544_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31524.1\|4549603_4549888_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31522.1\|4548550_4548850_+\|hypothetical-protein	unknown	unknown	unknown
CP032819.1\|AZS31534.1\|4560837_4561065_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237660

Protein	Function_ID	Function_description	E-value
CP032819.1\|AZS31535.1\|4561073_4561784_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.1552e-08
CP032819.1\|AZS31530.1\|4556505_4558584_+\|kinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	0.00178574
CP032819.1\|AZS31526.1\|4551364_4552231_+\|hypothetical-protein	gnl\|CDD\|375182	pfam17415, NigD_C, NigD-like C-terminal beta sandwich domain. This family of proteins is functionally uncharacterized. This family of proteins is found in Bacteroides species. Proteins in this family are typically between 234 and 260 amino acids in length. These proteins possess an N-terminal lipoprotein attachment site. The family includes NigD a protein found in the Nig operon that encodes a bacteriocin called nigrescin. It has been suggested that NigD may be the immunity protein for nigrescin (NigC) because it is directly downstream. This entry represents the C-terminal beta-sandwich domain of NigD.	7.97386e-24
CP032819.1\|AZS31525.1\|4550169_4551150_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376559	pfam01520, Amidase_3, N-acetylmuramoyl-L-alanine amidase. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls.	7.92493e-27
CP032819.1\|AZS31533.1\|4560205_4560826_+\|hypothetical-protein	gnl\|CDD\|223993	COG1066, Sms, Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].	0.0002773
CP032819.1\|AZS32132.1\|4558607_4559477_+\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	2.73222e-10
CP032819.1\|AZS31520.1\|4547497_4547947_+\|DUF4304-domain-containing-protein	gnl\|CDD\|379489	pfam14137, DUF4304, Domain of unknown function (DUF4304). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 154 and 223 amino acids in length.	3.96897e-05
CP032819.1\|AZS31534.1\|4560837_4561065_+\|hypothetical-protein	gnl\|CDD\|237660	PRK14289, PRK14289, molecular chaperone DnaJ.	0.00959322

>CP032819.1|AZS31526.1|4551364_4552231_+|hypothetical-protein
MKNKTWKFTLICSLIVMGFTACDDDDEYYYVGGGSSWLSYGNLEKIDNGSRSKFAIRRDDGNRLIVTEGMPIRFDGAKEDLRVYAHYSIVGSERDESGLEGNMNYYVRLYGLDDVLTKVPVKQSFIHENEGVRQDSIGNDPINVQEAWFGGRYLNVEFRIPVKDGSKEKHFINLVQDDVVAHHDTVYVTLRHNAYGEKPGTGNDRGNFSWGRGRVSFDLTSIVPEGQTSVPVKLIWTEYGKNASETVRREDSGTYTLKNARKTGKDRGLNQDKSKMVSTEGVGECVVE
>CP032819.1|AZS31525.1|4550169_4551150_-|N-acetylmuramoyl-L-alanine-amidase
MPMKHALTIFSFLLLTIFMFPATAQETAKANKGEGVLQFLKRFNRTKPFHMERFFELNRNKLDKNNGLQLDVTYTLPPLNNEGYEPLFGEKLAKYTIDSDELNGACFYLVSGHGGPDPGAIGELRGHPLHEDEYAYDITLRLARNLMSKGAKVHIIIQDAQDGIRDEKFLDVSDRETCMGQAIPLNQVKRLQQRCDKINELYKKDKEHYRRALFIHLDSRSESKQIDVFFYHYDGSVKGKHLANTLQNVFNRKYDKHQPLRGFSGTVSPRDLYVIKQTLPVAVFIELGNIQNSRDQQRFLLDDNRQALANWMCEGLIEDYKNYSKK
>CP032819.1|AZS31524.1|4549603_4549888_+|hypothetical-protein
MKYGTGIRDKYEGGYIEPCSLGLSSATIVRLNDWLSEYWKEHDNGYIDSAIIDMLDQKGLEIAMRIKKELPEMNVEYFSDARMVPVLKENIGRI
>CP032819.1|AZS31523.1|4549241_4549607_+|hypothetical-protein
MELFMMREELSLQEKLEYRNILNGIGEILLRLNFLGQYQVISDLLNLLDKNEDMIFIKELNGVNMWGGAGAVWEVGIQEKKDEITFINKLIELIDFMETTNVLGRGIKSIKRILSSIKQVT
>CP032819.1|AZS31522.1|4548550_4548850_+|hypothetical-protein
MNGYYRINKQRCLQKLESWSKFMIQGQRWKLYDDIHVDEVSKVFQARDRWFNGGLFLLDCLSKKLDQAYDCFLAIPLLETGCKTDLKDLNIDYIKKKFA
>CP032819.1|AZS31521.1|4548085_4548544_+|hypothetical-protein
MILESEGRFVEIIILHRNNLESIDIEDANWLDAEIKINVPGFKGYYNANLRTDDFERFYKDLNKLKTDRFFQIEFTTMEEGIYLKGTQGLLGTIKWEGIARSYWGNSVLTFEIETGFASIDALIEQTLEILNEYPVQESEKLAELKKNEIEF
>CP032819.1|AZS31520.1|4547497_4547947_+|DUF4304-domain-containing-protein
MESKEFKKVFEKVAKANNFEKAFGGWFKESTECIVVLCLQKSNFGDYYELNIKIFIQGMSGNKYTRSKDLVKKNVGDVFTRQPSDYSNVLDFDISMDDGKRIEKLESLFREFIVPFTDMALSRLGLRELAKEGKIFLLPAVKEGLTILS
>CP032819.1|AZS31519.1|4546612_4547101_+|hypothetical-protein
MKKYYFFICIALLFCSACKNKKNSENDNESKDIFIPILKNKLDSFFVYADTTYGRHGDHGLLYTISFHEKNGKQIVSLGVDFFYHLRRIKGYTFVNDRLVVYNGNYSDQKQYLLDTSKLTIFADTILGYRSDIVLDMDYEVIKQDYLICDKDSLSLIFSGFY
>CP032819.1|AZS31518.1|4546181_4546448_+|hypothetical-protein
MAEDKKHNCHVCGLYSEDLPWGKDGQSPTYIICDCCGVEFGNEDYTVESTKKYREEWIKKGAPWFISKAKPLNWSLERQLMNIPNKFK
>CP032819.1|AZS31517.1|4545614_4546043_+|hypothetical-protein
MKVRCVSNRGMDLRPYEYEQIGEDILGRFGASAYTRYGIEIGREYLVMGIIVYQTYQAYLIDDDGLILSCPCQLFEVLDERLIFNWEFRTIGKDEDIYPFVQAILGYTELCTDKKSYENLIIEKDEYARQIYFKRKIEFENE
>CP032819.1|AZS31527.1|4555268_4555652_-|XRE-family-transcriptional-regulator
MTINERMNHIIKELYGGNKRAFANAIGVSATVIENVVGTRQGKPSYDVLEKVCANANISAEWLLMERGEMLYNSTSQTQYTPPDQNTHYFIEKIAEQAEEIGKLKEQVKLLGTQQSAAPDAICADVV
>CP032819.1|AZS31528.1|4555812_4556022_+|hypothetical-protein
MQAIKVQIYFSEWEKVSDFISEINIDEEMAAYAIDNRTMVIATVGECSMAYAKAQLKTWFSDPTIETIK
>CP032819.1|AZS31529.1|4556029_4556215_+|hypothetical-protein
MKKRIVVEYGKISQISKDFKVTRQAVYKALNYLSNSSKATLIRKVAIERGGVEIGDQKETA
>CP032819.1|AZS31530.1|4556505_4558584_+|kinase
MEYFNKIVCVTVQELTSSENGEPVISLWTLYSLIRRGKAQRVNRGGGLDNYALIDYLSLPERYRIRFEQKYGDPVELIKEKCMKNRLKIDEAARIFFEDYRYDKAGELVSLTEPKKAEYTINASVLNELISILNDREGYRKALGGSTKKVWETIIGTADRLRDSYGHTLPENAARLKDKINQYKKEGYSCLISKKMGNGNTLKITEEAGNMIIALKRSSVPVYTDAQIFVEFNRIADEKGWKQLRSIQSLRQFLNRPDIEPLWYDAVHGELKAHQRYSRKNKTELPSMRDSLWYGDGTKINLYYKDYDKDGKLVVRTTQVYEVIDAYSEVFLGYHISDSEDYEAQYNAYRMAIQVSGHKPYELVHDNQGGHKKLQNSHFFDKIVGHVHRTTAPYSGQSKTIESVFGRFQAEVLHKDWRFTGQNITTKKDTSRPNLERIEANKDKLYTLAELKAAYAAARKEWNESKHFATGVNRIEMYQNSVNPDTPTVGVLDMIEMFWVMTDKPSTYTDNGLKITIKKREFTYEVYEVPGVPDHEFLRKNRGQKFYTMYDPYDHTSVRLYKKDKAGELRFVRTAEPYIVIHRNIQEQTEGEMSFIRRNIEANTEDRIERQVDARIIEQAHGVSMEQQGLKRPKLKGAKSETEREIERRVRRYSQDPEQLSAGKVTKLISNITFDQLNGDIRLNEKKVAGKL
>CP032819.1|AZS32132.1|4558607_4559477_+|ATP-binding-protein
MTQQEKDSIREALRVYAAKYSSQKKAAASLNGVSAGTLSAVVNGKYESISDDMFRNIISQITPAAAATGWQLVETNSFQEIWYALSDAQEFKKVRWIVGGAGCGKTTTATMYAQKNHEVFVILCDEDMRKGDFVREIARKLGFKTCGMRIREILDLAIESIIQMENPLLVFDEGDKLNDNVFHYFINLYNRLEGKCGITFLSTDYIQHRIDCGLNHNRKGYNEIYSRIGRKFFELEPTSHNDVFAICQANGLMDKKLIANVIDVTEKSEFDLRCVKDAIHREKKVAAAK
>CP032819.1|AZS31531.1|4559534_4559738_+|hypothetical-protein
MSKIEEVFRGLGRTEKAKFISQNIDYANADAIAEYVSAYLFDVLKDVGNDEYVATYLKEKGYKVTKE
>CP032819.1|AZS31532.1|4559758_4560202_+|hypothetical-protein
MKQIVLPLASRFPVGHFKRGQLTGFPEKVIKGTKIHTFREDPGKWAYNVELINSHNAELSIRRWIGRPYHTPQLEVKRLKKIGIQQVQMTWDSDIEQPTVFIDGKRILNVEQLAANDGMTLDDFVSWFFKTSNTFEGVIIHFTDFRY
>CP032819.1|AZS31533.1|4560205_4560826_+|hypothetical-protein
MARALSVTEAVSMKKETLKLTGAWADAFGEPERIGVWFIWGNSGNGKSSFVMQLCKELAKFGRVAYDSLEEGASLTMQNTLRRFNMAEVNRRFQLLDCEPMSELGERMDKHKSPDFYVIDSFQYTQMSYKEYIKFKEAHRNKLLIFISHADGRNPDGRSAKKVMYDAALKIYVEGFRAFSKGRFFGSVGHFTIWDEGAVRYWGDNA
>CP032819.1|AZS31534.1|4560837_4561065_+|hypothetical-protein
MSKNNQVITISPPMFIGEGNQKESISSKGHRCSYCHGNGFFWGEEQRERVKVDCPVCKGSGKLDAVITIEWKPAK
>CP032819.1|AZS31535.1|4561073_4561784_+|DUF2786-domain-containing-protein
MEKEVPENILAKIRKLLRLKESAIKIGSEGEAHAAAEAVNRLLTSYNLSLMDVTPEEQKNMISVTESEKITYQDTYGNIWKRDLLRIICEYNFCRILLHGGTTYMVVVGTRENAEVVLSLYNYLRSVFRRLSVERCTEYVATRRGYYRTKKFKRNYIKSYLLGCCTGLRKQFESIRKTAEETGLMLCHNHLIDDYFQSIGTTTHKSKNRNKVNTSAYCSGYDDGSKINLNKQINGK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032819_3	3.1\|1581530\|28\|CP032819\|CRISPRCasFinder	1581530-1581557	28	MN234235	Mycobacterium phage BogosyJay, complete genome	33380-33407	8	0.714
CP032819_3	3.1\|1581530\|28\|CP032819\|CRISPRCasFinder	1581530-1581557	28	MN234200	Mycobacterium phage Maminiaina, complete genome	33362-33389	8	0.714

1. spacer 3.1|1581530|28|CP032819|CRISPRCasFinder matches to MN234235 (Mycobacterium phage BogosyJay, complete genome) position: , mismatch: 8, identity: 0.714

tcgtttctcccggggaggaggcgcagcg	CRISPR spacer
agcaggctcccgcggaggaggcgcagca	Protospacer
      ****** **************.

2. spacer 3.1|1581530|28|CP032819|CRISPRCasFinder matches to MN234200 (Mycobacterium phage Maminiaina, complete genome) position: , mismatch: 8, identity: 0.714

tcgtttctcccggggaggaggcgcagcg	CRISPR spacer
agcaggctcccgcggaggaggcgcagca	Protospacer
      ****** **************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

934442 : 944756

unidentified_phage(62.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZS28788.1\|934442_935210_-	3'-5' exonuclease	H7BUJ3	unidentified_phage	1.3e-71	54.1
AZS28789.1\|935216_937325_-	DNA polymerase III subunit alpha	H7BUJ5	unidentified_phage	2.5e-245	57.6
AZS28790.1\|937375_937933_-	hypothetical protein	A0A1W6JNG3	Staphylococcus_phage	3.0e-20	36.4
AZS28791.1\|937932_938475_-	HNH endonuclease	R9QM99	Lactococcus_phage	7.9e-18	38.2
AZS28792.1\|938467_939235_-	site-specific DNA-methyltransferase	A0A2I7QM56	Vibrio_phage	5.5e-65	51.9
AZS28793.1\|939200_940958_-	PHP domain-containing protein	H7BUJ7	unidentified_phage	1.0e-114	47.5
AZS28794.1\|940954_941995_-	hypothetical protein	H7BUJ8	unidentified_phage	4.4e-118	58.7
AZS28795.1\|942126_942426_-	hypothetical protein	NA	NA	NA	NA
AZS28796.1\|942538_943204_+	hypothetical protein	NA	NA	NA	NA
AZS28797.1\|943400_944756_-	hypothetical protein	H7BUJ9	unidentified_phage	1.3e-133	52.2

DBSCAN-SWA_2

1332936 : 1338418

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZS29145.1\|1332936_1333803_-	aminoglycoside 6-adenylyltransferase AadE	E4ZFP8	Streptococcus_phage	7.5e-103	63.7
AZS29146.1\|1333959_1334199_-	aspartate racemase	NA	NA	NA	NA
AZS29147.1\|1334195_1335062_-	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	3.2e-61	48.2
AZS29148.1\|1335286_1336081_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
AZS29149.1\|1336173_1336317_-	streptothricin acetyltransferase	E4ZFP7	Streptococcus_phage	3.4e-13	100.0
AZS29150.1\|1336606_1336738_-	hypothetical protein	E4ZFP9	Streptococcus_phage	8.2e-14	90.7
AZS29151.1\|1336742_1337504_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	6.3e-130	94.9
AZS29152.1\|1337539_1338418_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.6e-55	46.2

DBSCAN-SWA_3

1686833 : 1695416

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZS29452.1\|1686833_1688444_-	ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	8.0e-50	27.5
AZS29453.1\|1688482_1689337_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.3e-43	41.5
AZS29454.1\|1689420_1691361_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
AZS31934.1\|1691372_1691918_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D8EQH2	Escherichia_phage	2.1e-42	49.7
AZS29455.1\|1691982_1693035_-	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	1.6e-83	48.2
AZS29456.1\|1693219_1694092_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.1e-106	64.2
AZS29457.1\|1694126_1695416_-	nucleotide sugar dehydrogenase	A0A218MKK1	uncultured_virus	1.3e-10	25.5

DBSCAN-SWA_4

3755868 : 3764869

unidentified_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZS30969.1\|3755868_3757224_+	hypothetical protein	H7BUJ9	unidentified_phage	2.9e-133	51.8
AZS30970.1\|3757240_3757603_+	hypothetical protein	NA	NA	NA	NA
AZS30971.1\|3757858_3758899_+	hypothetical protein	H7BUJ8	unidentified_phage	7.6e-118	58.7
AZS30972.1\|3758895_3760653_+	PHP domain-containing protein	H7BUJ7	unidentified_phage	7.8e-115	47.5
AZS30973.1\|3760618_3761386_+	site-specific DNA-methyltransferase	A0A2I7QM56	Vibrio_phage	7.9e-64	50.6
AZS30974.1\|3761378_3761921_+	HNH endonuclease	E5DV63	Deep-sea_thermophilic_phage	2.0e-29	44.6
AZS30975.1\|3761917_3764095_+	DNA polymerase III subunit alpha	H7BUJ5	unidentified_phage	9.9e-253	57.0
AZS30976.1\|3764101_3764869_+	3'-5' exonuclease	H7BUJ3	unidentified_phage	3.0e-71	54.1

Anti-CRISPR protein detection

Acr_ID: CP032819.1|AZS29041.1|1226065_1226488_+|PcfK-like-protein

Click the colored protein region to show detailed information

Acr_ID: CP032819.1|AZS29109.1|1296839_1297262_+|PcfK-like-protein

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Acr_ID: CP032819.1|AZS29180.1|1366583_1367039_+|PcfK-like-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

CP032819.1|AZS29041.1|1226065_1226488_+|PcfK-like-protein

1226065_1226488_+

140 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5602836879432624	1	1.0

CP032819.1|AZS29109.1|1296839_1297262_+|PcfK-like-protein

1296839_1297262_+

140 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5384615384615384	1	0.9858156028368794

CP032819.1|AZS29180.1|1366583_1367039_+|PcfK-like-protein

1366583_1367039_+

151 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5819672131147541	0.8145695364238411	0.8652482269503546

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032819

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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